Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr1

Orthogroup ID

OG0016074

Physical Location & Seq

Genomic Coordinates Reverse (-)

14639652 .. 14641463

Gene Structure 1812 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000001359

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1812 bp

ATGGCTGACCCACTTCCCAAACCCAACTCCACACTCTCAAACCTTCTAACGACCAGAGTCCCCAAACCCCCAGTAAACCCTCCAAACCACAGTCACATTTGCAACCTCCTCCTCTCCCTAACTCACTCAAGGGCCCTCCCAAAGGGTCTCCAGCTCCACGCCCATGTCATCAAATCAGGCTTCCAAACCATCCCTCTTGTCTCTCACCACCTCATCAACTTCTACTCCAAAAACCAACTCCCCCTCCTTTCCCGCCAAATTTTCGAACAATTTCCCCACAAGTCCTCCACTACTTGGAGCTCCCTCATCTCTTCCTTTGCCCAGAATGAGCTCCCTCTTCTTGCCATTCGCTACTTTCGCCGAATGCTCGGCACCTCATTGCGCCCCGACGAACATATATACCCCAGTGTCACCAAGTCCTGCGCAATTCTGAACCGCCCTGATGTTGGGCAGTCTATACATTGCCTTGCGGTCAAGACGGGGTATCATGTTGATGTGTTTGTGGCAAGTTCTGTTGTTGACATGTATGCGAAATGTGGGCAGATAAGACATGCCCGCAACATGTTCGATGAAATGCCTCACAAGAATGTGGTTTCTTGGAGTGGGATGATTTACGGGTACACTCAAGCCGGGGAGGCGGAGGAGGCTTTGGTGCTTTTTAAACAAGCATTGCTTGAGGATTTGGACGTCAATGATTTTACATTTTCGAGTGTTGTAAGGGTTTGCGGCAGTTCGACGCTTCTTGAATTGGGGAGGCAAATACATGGCTTGTGCTTCAAGACCAGTTTTGATTCGTCGAGTTTTGTTGGTAGTTCTTTGGTGTCCTTGTACTCTAAGTGTGGAGTGATTGAAGGGGCTTATCGAGTTTTTGATGAGATACCTGTTAAAAATCTTGGGATGTGGAATGCAATGCTGATAGCCTGCGCACAGCACGTGCACACAAATAAGACTTTTGATCTGTTTAAACAGATGGAAAGTACTGGGATGAAGCCGAATTTTATTACATTTTTGTGTGTGCTCTATGCTTGTAGCCATGCTGGGCTTGTTGAAAAGGGGCAGCATTACTTTCGGCTCATGAAAGAGTATGGGATTGAGCCAGGGGAAATGCATTATGCTTCCTTGGTGGACTTGCTTGGCCGCGCTGGAAAGTTGCAGGATGCAGTCAAAATAATAGAGGGGATGCCTATTGAACCCACAGAGTCTGTATGGGGAGCTTTGTTAACAGGTTGTCGACTCCATGGAGACACTGAATTGGCAGCTTCCGTGGCTGACAAAATCTTTGAGTTGGGTTCTGTAAGCTCTGGGATGCATGTGCTCGTATCCAATGCTTATGCTGCTGCTGGGAGATTCGAGGAAGCAGCAAAAGCTAGGAAGATGCTAAGAGACCGAGGGGTGAAAAAGGAGACAGGTTTGAGTTGGGTTGAGGAAGGAAACAAGATTCACACATTCGCTGCTGGGGACAGGACTCACATGAGGACTAAAGAGATTTATCAGAAGTTGGAAGAAATGGGGGAGGAAATGGAGAGGGCTGGTTATGTTGCAGACACAAGTTTTGTGCTTAGAGAAGTAAATAATGAAGAGAAAAACCAGACGATTAGGTATCATAGTGAAAGACTAGCCGTTGCATTTGGCCTTTTAACCATTCCTACAGATAGGCCAATCAGGATTATGAAGAACTTGCGTATTTGTGGTGATTGTCATACTGCTATCAAGTTTATGTCCAAGTGTTCAGGAAGGGTTATCGTTGTTAGGGATAACAATAGGTTTCATAGGTTTGAGGATGGAAAATGCACTTGTGGAGATTATTGGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016553 GO:0016554 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DYW_deaminase PPR

Protein Analysis

604

Amino Acids

67.55

Weight (kDa)

8.47

Isoelectric Point (pI)

40.96

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	299 - 344	1.8e-06	PPR repeat family
PPR_long	PF17177	300 - 385	1.7e-06	Pentacotripeptide-repeat region of PRORP
PPR_long	PF17177	305 - 394	1.7e-06	Pentacotripeptide-repeat region of PRORP
E_motif	PF20431	413 - 475	1.2e-11	E motif
Eplus_motif	PF20430	480 - 507	6.4e-06	E+ motif
DYW_deaminase	PF14432	511 - 603	3e-39	DYW family of nucleic acid deaminases

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0016074)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G52630
fragaria_vesca	FvH4_5g33500 FvH4_5g33500 FvH4_5g33620
malus_domestica	MD12G1068000.v1.1 MD14G1068100.v1.1
prunus_persica	Prupe.7G066200_v2.0.a1
pyrus_communis	pycom12g06000
rosa_chinensis	RchiOBHm_Chr7g0232261
rosa_laevigata	RLG00000001359
rosa_multiflora	Rmu_sc0004136.1_g000002
rosa_roxburghii	Rroxscaffold_3G00228480
rosa_samantha	Rh7AG426400 Rh7BG400100
rosa_wichuraiana	Rw7G035330

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	690
Acc16I	TGCGCA	2 cut(s)	424, 925
AccB1I	GGYRCC	1 cut(s)	371
AccB7I	CCANNNNNTGG	1 cut(s)	294
AccI	GTMKAC	1 cut(s)	1231
AccII	CGCG	1 cut(s)	1140
AciI	CCGC	7 cut(s)	253, 436, 470, 556, 638, 726, 1138
AcoI	YGGCCR	1 cut(s)	1135
AcsI	RAATTY	2 cut(s)	258, 994
AcvI	CACGTG	1 cut(s)	934
AcyI	GRCGYC	1 cut(s)	687
AfaI	GTAC	3 cut(s)	620, 830, 979
AfiI	CCNNNNNNNGG	3 cut(s)	142, 294, 446
AflIII	ACRYGT	2 cut(s)	522, 561
AgsI	TTSAA	5 cut(s)	746, 778, 851, 1049, 1190
AjnI	CCWGG	1 cut(s)	1096
AluBI	AGCT	7 cut(s)	154, 300, 331, 1214, 1259, 1299, 1367
AluI	AGCT	7 cut(s)	154, 300, 331, 1214, 1259, 1299, 1367
Alw21I	GWGCWC	5 cut(s)	302, 333, 939, 1020, 1317
Alw26I	GTCTC	5 cut(s)	152, 205, 1236, 1377, 1397
Alw44I	GTGCAC	1 cut(s)	935
AlwNI	CAGNNNCTG	1 cut(s)	1202
AoxI	GGCC	4 cut(s)	132, 1135, 1630, 1655
ApaI	GGGCCC	1 cut(s)	136
ApaLI	GTGCAC	1 cut(s)	935
ApeKI	GCWGC	6 cut(s)	1057, 1256, 1334, 1337, 1358, 1451
ApoI	RAATTY	2 cut(s)	258, 994
ArsI	GACNNNNNNTTYG	4 cut(s)	1262, 1294, 1535, 1567
Asp700I	GAANNNNTTC	1 cut(s)	270
AspLEI	GCGC	4 cut(s)	384, 425, 926, 1142
AspS9I	GGNCC	2 cut(s)	132, 133
AsuC2I	CCSGG	1 cut(s)	631
AsuHPI	GGTGA	4 cut(s)	197, 403, 1405, 1703
AsuII	TTCGAA	1 cut(s)	264
BaeGI	GKGCMC	2 cut(s)	136, 939
BanI	GGYRCC	1 cut(s)	371
BanII	GRGCYC	3 cut(s)	136, 302, 333
BbrPI	CACGTG	1 cut(s)	934
Bbv12I	GWGCWC	5 cut(s)	302, 333, 939, 1020, 1317
BbvI	GCAGC	6 cut(s)	1069, 1268, 1321, 1324, 1370, 1438
BccI	CCATC	3 cut(s)	197, 964, 1775
BceAI	ACGGC	1 cut(s)	1604
BcgI	CGANNNNNNTGC	4 cut(s)	547, 581, 1049, 1083
BciT130I	CCWGG	1 cut(s)	1098
BciVI	GTATCC	1 cut(s)	1330
BcnI	CCSGG	1 cut(s)	631
BcoDI	GTCTC	5 cut(s)	152, 205, 1236, 1377, 1397
BfaI	CTAG	2 cut(s)	1368, 1616
BfmI	CTRYAG	1 cut(s)	1647
BfuI	GTATCC	1 cut(s)	1330
BglI	GCCNNNNNGGC	1 cut(s)	635
BisI	GCNGC	8 cut(s)	727, 1058, 1138, 1257, 1335, 1338, 1359, 1452
BlsI	GCNGC	8 cut(s)	728, 1059, 1139, 1258, 1336, 1339, 1360, 1453
BmcAI	AGTACT	1 cut(s)	979
Bme1390I	CCNGG	2 cut(s)	631, 1098
BmgT120I	GGNCC	2 cut(s)	132, 133
BmiI	GGNNCC	2 cut(s)	134, 373
BmrFI	CCNGG	2 cut(s)	631, 1098
BmrI	ACTGGG	3 cut(s)	65, 399, 990
BmsI	GCATC	4 cut(s)	1147, 1170, 1296, 1365
BmuI	ACTGGG	3 cut(s)	65, 399, 990
BoxI	GACNNNNGTC	1 cut(s)	56
BpmI	CTGGAG	1 cut(s)	134
Bpu14I	TTCGAA	1 cut(s)	264
BpuEI	CTTGAG	3 cut(s)	112, 609, 695
BpuMI	CCSGG	1 cut(s)	631
BsaAI	YACGTR	1 cut(s)	934
BsaHI	GRCGYC	1 cut(s)	687
BsaI	GGTCTC	2 cut(s)	152, 1377
BsaJI	CCNNGG	6 cut(s)	630, 1097, 1119, 1237, 1263, 1387
BsaXI	ACNNNNNCTCC	6 cut(s)	209, 228, 239, 258, 269, 299
Bsc4I	CCNNNNNNNGG	3 cut(s)	142, 294, 446
Bse1I	ACTGG	4 cut(s)	71, 405, 783, 985
Bse3DI	GCAATG	4 cut(s)	377, 460, 668, 915
BseBI	CCWGG	1 cut(s)	1098
BseDI	CCNNGG	6 cut(s)	630, 1097, 1119, 1237, 1263, 1387
BseGI	GGATG	8 cut(s)	189, 612, 903, 990, 1162, 1185, 1311, 1786
BseLI	CCNNNNNNNGG	3 cut(s)	142, 294, 446
BseMI	GCAATG	4 cut(s)	377, 460, 668, 915
BseNI	ACTGG	4 cut(s)	71, 405, 783, 985
BseRI	GAGGAG	3 cut(s)	98, 101, 656
BseSI	GKGCMC	2 cut(s)	136, 939
BseXI	GCAGC	6 cut(s)	1069, 1268, 1321, 1324, 1370, 1438
BseYI	CCCAGC	3 cut(s)	1037, 1340, 1454
Bsh1236I	CGCG	1 cut(s)	1140
BshFI	GGCC	4 cut(s)	134, 1137, 1632, 1657
BshNI	GGYRCC	1 cut(s)	371
BsiHKAI	GWGCWC	5 cut(s)	302, 333, 939, 1020, 1317
BsiSI	CCGG	1 cut(s)	630
BslFI	GGGAC	2 cut(s)	44, 1472
BslI	CCNNNNNNNGG	3 cut(s)	142, 294, 446
BsmAI	GTCTC	5 cut(s)	152, 205, 1236, 1377, 1397
BsmFI	GGGAC	2 cut(s)	44, 1472
BsmI	GAATGC	2 cut(s)	369, 910
BsnI	GGCC	4 cut(s)	134, 1137, 1632, 1657
Bso31I	GGTCTC	2 cut(s)	152, 1377
Bsp119I	TTCGAA	1 cut(s)	264
Bsp120I	GGGCCC	1 cut(s)	132
Bsp1286I	GDGCHC	6 cut(s)	136, 302, 333, 939, 1020, 1317
Bsp143I	GATC	1 cut(s)	955
Bsp19I	CCATGG	1 cut(s)	1237
BspACI	CCGC	7 cut(s)	253, 436, 470, 556, 638, 726, 1138
BspANI	GGCC	4 cut(s)	134, 1137, 1632, 1657
BspFNI	CGCG	1 cut(s)	1140
BspHI	TCATGA	1 cut(s)	1074
BspLI	GGNNCC	2 cut(s)	134, 373
BspT104I	TTCGAA	1 cut(s)	264
BspT107I	GGYRCC	1 cut(s)	371
BspTNI	GGTCTC	2 cut(s)	152, 1377
BsrDI	GCAATG	4 cut(s)	377, 460, 668, 915
BsrI	ACTGG	4 cut(s)	71, 405, 783, 985
BssECI	CCNNGG	6 cut(s)	630, 1097, 1119, 1237, 1263, 1387
BssMI	GATC	1 cut(s)	955
BssNI	GRCGYC	1 cut(s)	687
BssT1I	CCWWGG	2 cut(s)	1119, 1237
Bst2UI	CCWGG	1 cut(s)	1098
Bst4CI	ACNGT	1 cut(s)	92
Bst6I	CTCTTC	3 cut(s)	316, 342, 1572
BstACI	GRCGYC	1 cut(s)	687
BstBAI	YACGTR	1 cut(s)	934
BstBI	TTCGAA	1 cut(s)	264
BstC8I	GCNNGC	2 cut(s)	556, 922
BstDEI	CTNAG	3 cut(s)	834, 1379, 1559
BstDSI	CCRYGG	2 cut(s)	1237, 1263
BstENI	CCTNNNNNAGG	1 cut(s)	140
BstF5I	GGATG	8 cut(s)	189, 612, 903, 990, 1162, 1185, 1311, 1786
BstFNI	CGCG	1 cut(s)	1140
BstHHI	GCGC	4 cut(s)	384, 425, 926, 1142
BstKTI	GATC	1 cut(s)	958
BstMAI	GTCTC	5 cut(s)	152, 205, 1236, 1377, 1397
BstMBI	GATC	1 cut(s)	955
BstMWI	GCNNNNNNNGC	6 cut(s)	357, 635, 644, 1265, 1334, 1364
BstNI	CCWGG	1 cut(s)	1098
BstNSI	RCATGY	4 cut(s)	526, 554, 565, 1313
BstPAI	GACNNNNGTC	1 cut(s)	56
BstSCI	CCNGG	2 cut(s)	629, 1096
BstSFI	CTRYAG	1 cut(s)	1647
BstSLI	GKGCMC	2 cut(s)	136, 939
BstUI	CGCG	1 cut(s)	1140
BstV1I	GCAGC	6 cut(s)	1069, 1268, 1321, 1324, 1370, 1438
BsuI	GTATCC	1 cut(s)	1330
BsuRI	GGCC	4 cut(s)	134, 1137, 1632, 1657
BtgI	CCRYGG	2 cut(s)	1237, 1263
BtsCI	GGATG	8 cut(s)	189, 612, 903, 990, 1162, 1185, 1311, 1786
BtsIMutI	CAGTG	2 cut(s)	412, 1245
Cac8I	GCNNGC	2 cut(s)	556, 922
CaiI	CAGNNNCTG	1 cut(s)	1202
CciI	TCATGA	1 cut(s)	1074
CfoI	GCGC	4 cut(s)	384, 425, 926, 1142
Cfr13I	GGNCC	2 cut(s)	132, 133
CseI	GACGC	1 cut(s)	745
Csp6I	GTAC	3 cut(s)	619, 829, 978
CviQI	GTAC	3 cut(s)	619, 829, 978
DdeI	CTNAG	3 cut(s)	834, 1379, 1559
DpnI	GATC	1 cut(s)	957
DpnII	GATC	1 cut(s)	955
DraI	TTTAAA	2 cut(s)	661, 964
EaeI	YGGCCR	1 cut(s)	1135
Eam1104I	CTCTTC	3 cut(s)	316, 342, 1572
EarI	CTCTTC	3 cut(s)	316, 342, 1572
EciI	GGCGGA	1 cut(s)	653
Ecl136II	GAGCTC	2 cut(s)	300, 331
Eco130I	CCWWGG	2 cut(s)	1119, 1237
Eco24I	GRGCYC	3 cut(s)	136, 302, 333
Eco31I	GGTCTC	2 cut(s)	152, 1377
Eco53kI	GAGCTC	2 cut(s)	300, 331
Eco72I	CACGTG	1 cut(s)	934
EcoICRI	GAGCTC	2 cut(s)	300, 331
EcoNI	CCTNNNNNAGG	1 cut(s)	140
EcoO109I	RGGNCCY	2 cut(s)	132, 133
EcoRII	CCWGG	1 cut(s)	1096
EcoT14I	CCWWGG	2 cut(s)	1119, 1237
EcoT22I	ATGCAT	2 cut(s)	1110, 1311
EcoT38I	GRGCYC	3 cut(s)	136, 302, 333
ErhI	CCWWGG	2 cut(s)	1119, 1237
FalI	AAGNNNNNCTT	2 cut(s)	657, 689
FaqI	GGGAC	2 cut(s)	44, 1472
FauI	CCCGC	2 cut(s)	260, 563
FblI	GTMKAC	1 cut(s)	1231
Fnu4HI	GCNGC	8 cut(s)	727, 1058, 1138, 1257, 1335, 1338, 1359, 1452
FokI	GGATG	8 cut(s)	176, 619, 910, 997, 1169, 1192, 1318, 1793
FriOI	GRGCYC	3 cut(s)	136, 302, 333
Fsp4HI	GCNGC	8 cut(s)	727, 1058, 1138, 1257, 1335, 1338, 1359, 1452
FspBI	CTAG	2 cut(s)	1368, 1616
FspI	TGCGCA	2 cut(s)	424, 925
GlaI	GCGC	4 cut(s)	383, 424, 925, 1141
GluI	GCNGC	8 cut(s)	727, 1058, 1138, 1257, 1335, 1338, 1359, 1452
GsaI	CCCAGC	3 cut(s)	1041, 1344, 1458
GsuI	CTGGAG	1 cut(s)	134
HaeIII	GGCC	4 cut(s)	134, 1137, 1632, 1657
HapII	CCGG	1 cut(s)	630
HgaI	GACGC	1 cut(s)	745
HhaI	GCGC	4 cut(s)	384, 425, 926, 1142
Hin1I	GRCGYC	1 cut(s)	687
Hin6I	GCGC	4 cut(s)	382, 423, 924, 1140
HinP1I	GCGC	4 cut(s)	382, 423, 924, 1140
HincII	GTYRAC	3 cut(s)	520, 1221, 1232
HindII	GTYRAC	3 cut(s)	520, 1221, 1232
HinfI	GANTC	7 cut(s)	57, 791, 1199, 1233, 1347, 1438, 1465
HpaI	GTTAAC	1 cut(s)	1221
HpaII	CCGG	1 cut(s)	630
HphI	GGTGA	4 cut(s)	197, 403, 1405, 1703
Hpy166II	GTNNAC	7 cut(s)	76, 520, 621, 937, 1126, 1221, 1232
Hpy188I	TCNGA	2 cut(s)	432, 1494
Hpy188III	TCNNGA	6 cut(s)	475, 743, 778, 1075, 1663, 1731
Hpy8I	GTNNAC	7 cut(s)	76, 520, 621, 937, 1126, 1221, 1232
Hpy99I	CGWCG	3 cut(s)	392, 739, 799
HpyAV	CCTTC	4 cut(s)	53, 845, 1421, 1728
HpyCH4III	ACNGT	1 cut(s)	92
HpyCH4IV	ACGT	2 cut(s)	687, 933
HpyF10VI	GCNNNNNNNGC	6 cut(s)	357, 635, 644, 1265, 1334, 1364
HpyF3I	CTNAG	3 cut(s)	834, 1379, 1559
HpySE526I	ACGT	2 cut(s)	687, 933
Hsp92I	GRCGYC	1 cut(s)	687
HspAI	GCGC	4 cut(s)	382, 423, 924, 1140
KspAI	GTTAAC	1 cut(s)	1221
Kzo9I	GATC	1 cut(s)	955
LmnI	GCTCC	5 cut(s)	159, 297, 305, 336, 1211
Lsp1109I	GCAGC	6 cut(s)	1069, 1268, 1321, 1324, 1370, 1438
LweI	GCATC	4 cut(s)	1147, 1170, 1296, 1365
MaeI	CTAG	2 cut(s)	1368, 1616
MaeII	ACGT	2 cut(s)	687, 933
MaeIII	GTNAC	2 cut(s)	92, 409
MalI	GATC	1 cut(s)	957
MboI	GATC	1 cut(s)	955
MboII	GAAGA	6 cut(s)	303, 329, 1384, 1514, 1589, 1684
MhlI	GDGCHC	6 cut(s)	136, 302, 333, 939, 1020, 1317
MluCI	AATT	6 cut(s)	258, 269, 426, 746, 994, 1250
MlyI	GAGTC	4 cut(s)	66, 1208, 1227, 1459
MmeI	TCCRAC	1 cut(s)	1479
Mph1103I	ATGCAT	2 cut(s)	1110, 1311
MroXI	GAANNNNTTC	1 cut(s)	270
MseI	TTAA	5 cut(s)	660, 885, 963, 1220, 1637
MslI	CAYNNNNRTG	4 cut(s)	162, 492, 585, 1009
MspI	CCGG	1 cut(s)	630
MspR9I	CCNGG	2 cut(s)	631, 1098
MssI	GTTTAAAC	1 cut(s)	964
Mva1269I	GAATGC	2 cut(s)	369, 910
MvaI	CCWGG	1 cut(s)	1098
MvnI	CGCG	1 cut(s)	1140
MwoI	GCNNNNNNNGC	6 cut(s)	357, 635, 644, 1265, 1334, 1364
NciI	CCSGG	1 cut(s)	631
NcoI	CCATGG	1 cut(s)	1237
NdeII	GATC	1 cut(s)	955
NlaIV	GGNNCC	2 cut(s)	134, 373
NmeAIII	GCCGAG	1 cut(s)	348
NmuCI	GTSAC	2 cut(s)	92, 409
NsbI	TGCGCA	2 cut(s)	424, 925
NsiI	ATGCAT	2 cut(s)	1110, 1311
NspI	RCATGY	4 cut(s)	526, 554, 565, 1313
NspV	TTCGAA	1 cut(s)	264
PagI	TCATGA	1 cut(s)	1074
PciI	ACATGT	2 cut(s)	522, 561
PctI	GAATGC	2 cut(s)	369, 910
PdmI	GAANNNNTTC	1 cut(s)	270
PfeI	GAWTC	3 cut(s)	791, 1347, 1438
PflMI	CCANNNNNTGG	1 cut(s)	294
PkrI	GCNGC	8 cut(s)	728, 1059, 1139, 1258, 1336, 1339, 1360, 1453
PleI	GAGTC	4 cut(s)	65, 1207, 1227, 1459
PmaCI	CACGTG	1 cut(s)	934
PmeI	GTTTAAAC	1 cut(s)	964
PmlI	CACGTG	1 cut(s)	934
PpsI	GAGTC	4 cut(s)	65, 1207, 1227, 1459
Ppu21I	YACGTR	1 cut(s)	934
PscI	ACATGT	2 cut(s)	522, 561
PshAI	GACNNNNGTC	1 cut(s)	56
Psp124BI	GAGCTC	2 cut(s)	302, 333
Psp6I	CCWGG	1 cut(s)	1096
PspCI	CACGTG	1 cut(s)	934
PspFI	CCCAGC	3 cut(s)	1037, 1340, 1454
PspGI	CCWGG	1 cut(s)	1096
PspN4I	GGNNCC	2 cut(s)	134, 373
PspOMI	GGGCCC	1 cut(s)	132
PspPI	GGNCC	2 cut(s)	132, 133
PstNI	CAGNNNCTG	1 cut(s)	1202
RsaI	GTAC	3 cut(s)	620, 830, 979
RsaNI	GTAC	3 cut(s)	619, 829, 978
RseI	CAYNNNNRTG	4 cut(s)	162, 492, 585, 1009
SacI	GAGCTC	2 cut(s)	302, 333
SalI	GTCGAC	1 cut(s)	1230
SaqAI	TTAA	5 cut(s)	660, 885, 963, 1220, 1637
SatI	GCNGC	8 cut(s)	727, 1058, 1138, 1257, 1335, 1338, 1359, 1452
Sau3AI	GATC	1 cut(s)	955
Sau96I	GGNCC	2 cut(s)	132, 133
ScaI	AGTACT	1 cut(s)	979
SchI	GAGTC	4 cut(s)	66, 1208, 1227, 1459
ScrFI	CCNGG	2 cut(s)	631, 1098
SduI	GDGCHC	6 cut(s)	136, 302, 333, 939, 1020, 1317
SfaNI	GCATC	4 cut(s)	1147, 1170, 1296, 1365
SfcI	CTRYAG	1 cut(s)	1647
SfuI	TTCGAA	1 cut(s)	264
SmiMI	CAYNNNNRTG	4 cut(s)	162, 492, 585, 1009
SmlI	CTYRAG	3 cut(s)	127, 624, 674
SmoI	CTYRAG	3 cut(s)	127, 624, 674
Sse9I	AATT	6 cut(s)	258, 269, 426, 746, 994, 1250
SsiI	CCGC	7 cut(s)	253, 436, 470, 556, 638, 726, 1138
SspMI	CTAG	2 cut(s)	1368, 1616
SstI	GAGCTC	2 cut(s)	302, 333
StyD4I	CCNGG	2 cut(s)	629, 1096
StyI	CCWWGG	2 cut(s)	1119, 1237
TaaI	ACNGT	1 cut(s)	92
TaiI	ACGT	2 cut(s)	690, 936
TaqI	TCGA	8 cut(s)	264, 567, 707, 734, 797, 862, 1231, 1350
TaqII	GACCGA	1 cut(s)	1401
TasI	AATT	6 cut(s)	258, 269, 426, 746, 994, 1250
TatI	WGTACW	2 cut(s)	828, 977
TauI	GCSGC	2 cut(s)	729, 1140
TfiI	GAWTC	3 cut(s)	791, 1347, 1438
Tru1I	TTAA	5 cut(s)	660, 885, 963, 1220, 1637
Tru9I	TTAA	5 cut(s)	660, 885, 963, 1220, 1637
TscAI	CASTG	2 cut(s)	412, 1252
TseFI	GTSAC	2 cut(s)	92, 409
TseI	GCWGC	6 cut(s)	1057, 1256, 1334, 1337, 1358, 1451
Tsp45I	GTSAC	2 cut(s)	92, 409
TspDTI	ATGAA	6 cut(s)	585, 1001, 1091, 1590, 1685, 1757
TspGWI	ACGGA	1 cut(s)	1252
TspRI	CASTG	2 cut(s)	412, 1252
Van91I	CCANNNNNTGG	1 cut(s)	294
VneI	GTGCAC	1 cut(s)	935
XagI	CCTNNNNNAGG	1 cut(s)	140
XapI	RAATTY	2 cut(s)	258, 994
XceI	RCATGY	4 cut(s)	526, 554, 565, 1313
XmiI	GTMKAC	1 cut(s)	1231
XmnI	GAANNNNTTC	1 cut(s)	270
XspI	CTAG	2 cut(s)	1368, 1616
ZraI	GACGTC	1 cut(s)	688
ZrmI	AGTACT	1 cut(s)	979
Zsp2I	ATGCAT	2 cut(s)	1110, 1311

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.