Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr12

Orthogroup ID

OG0002650

Physical Location & Seq

Genomic Coordinates Forward (+)

19320597 .. 19327677

Gene Structure 7081 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD12G1120500.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1644 bp

ATGGGGCATAGACATCAGTTCACCACATCTCATGTTTTTGAGAGTGAAAATGAGCAGAATTGGAATCATATAAACACAGAACAACCTTTTGGGCATTTGGGCTGGGAGGGCTCTGGGGAGAACAGTTCTTTCTTTTATCCTGTAGAAAACATGTGTATAGATGGAATGCCTTTTGCTTCAAATTGGAACCCGGCTCCGAGGTCATATGGGTACTCTTCCATGAACCACAATGTTGATGTACCGCATTTTCAACCTGATGCTTCAGGTCCATCTCATGACCCTTTTCAGCATCCAGTAAGTGCTGGTACCTTTGGCATGGCCAGTGGGAACTATGCTCACCATGCACCTTCTTCTAGTTATGACCAGTGTCCATTCCTTGGTGTTGAGGGTGGTTTTGTTGATCTCACAATGAGCAACGGAAGGGGTCCTCATAAGAGAAAAAGCCCAGGGATCCCTTCTGTATCTGAGAGAGGAAGCACCAGCAGACACTATAGTGCTGGAAGTAGTTCCTCTGAGCTCCCTAGGTCTGCAGAATTACAGCATGAGAAAGTAAACATGGATACCTCACACATGCCTTGGGATCACATCTCTATGATCCCTAGCTATAGAGGGAATGGACTCTCAATTAGGGGTGACGGATCCATGAGAAATGTGAGAAGCCGGTCTGAACATGATTTGGAGTCCAATCTAGCTAGGACACATTTATCGAGCAATCCTTTGCATACTTCTTATCCTACAAGTCTCCCTATTGACCATTCTAGTACGATCGATCTCTCTGGTCAGGGTTCTACTCGTTTGACCAATGAGTGGAACCATATTAGTGTGGCTCCTCATGGAAGGGTTATGGCTCCAGATACAAGTGGTTTTGGTCATGATCCCAACCACTTCCTTTTGGGAAGTAGTGGTAATGCTTCTGTGGATAATGGGTTATACCATCATGATTTCATGTCGAGCAGAAGTACTGCTGTTCCTCAAAGTTATCCTGGTGCCTTAGCCCAAACTGTAAGGGGTGTTCGCAGTACCTATTCTCAAAGATCTCCCCCAGCCTTCAGGGCTTCTTCAAGCAACTTGCGATTGGGACATGCATCACATTCAGATGAAGGATTGCAGCCGATGCCAGAAAATTACCCAAGACATCCTAGGCCAGTGGCCTCTGTTGGGTGGCGTCATAATGACAGGAGTGGTAGGTTGAGGATGTCTAATAATAGATACCGAGTCCCTGAAGAGTCTGCTCTCCAGGACCGGTTTTCGTCTGAGGGATTTATGGCTGTGGATCGCCCAGCTTTTCCTGGGTCGAGGAATATGCTTGATCATCATAGAGACATGAGGCTGGACATAGACAACATGAGTTATGAGGAACTCCTCGCACTAAGCGAAAGGATTGGGAATGTCAGCACAGGCTTGTCTGAAGATTTGATACCGAAGTGTTTAACAGAAACAATATATTGTTCATCAGATCAAATCCAGGATGAAGGTTCATGTGCAATTTGCCTGGAAGAGTACAATGACAGGGATGATGTTGGTGCATTGAAAAGTTGCGGTCACGATTACCATGTGAGCTGCATCAAGAAGTGGTTGTCAATGAAAAATTCTTGTCCAATCTGCAAAGGTTGTGCTCTTCCTGATAATATGAAGGAGAAATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004842 GO:0006464 GO:0006508 GO:0006511 GO:0006807 GO:0008150 GO:0008152 GO:0009056 GO:0009057 GO:0009987 GO:0010498 GO:0016567 GO:0016740 GO:0019538 GO:0019787 GO:0019941 GO:0030163 GO:0032446 GO:0036211 GO:0043161 GO:0043170 GO:0043412 GO:0043632 GO:0044237 GO:0044238 GO:0044248 GO:0044257 GO:0044260 GO:0044265 GO:0044267 GO:0051603 GO:0051865 GO:0061630 GO:0061659 GO:0070647 GO:0071704 GO:0140096 GO:1901564 GO:1901565 GO:1901575

KEGG Pathways

Metabolic & Signaling

ko03013 ko05164 map03013 map05164

Pfam Domains

Protein Families

zf-RING_2

Protein Analysis

548

Amino Acids

60.54

Weight (kDa)

6.17

Isoelectric Point (pI)

57.94

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
zf-rbx1	PF12678	489 - 536	1.1e-08	RING-H2 zinc finger domain
zf-RING_2	PF13639	493 - 536	1.9e-13	Ring finger domain
zf-C3HC4	PF00097	494 - 535	1.4e-08	Zinc finger, C3HC4 type (RING finger)
zf-C3HC4_2	PF13923	494 - 535	2.1e-08	Zinc finger, C3HC4 type (RING finger)
zf-RING_UBOX	PF13445	494 - 533	1.8e-06	RING-type zinc-finger
zf-RING_11	PF17123	494 - 522	7.5e-06	RING-like zinc finger

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0002650)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G37150 AT2G37150 AT2G37150 AT2G37150 AT2G37150 AT2G37150 AT2G37150 AT2G37150 AT2G37150 AT2G37150 AT2G37150 AT2G37150 AT2G37150 AT2G37150 AT2G37150
fragaria_vesca	FvH4_6g15650 FvH4_6g15650 FvH4_6g15650 FvH4_6g15650
malus_domestica	MD04G1100800.v1.1 MD12G1120500.v1.1
prunus_persica	Prupe.6G238800_v2.0.a1
pyrus_communis	pycom04g09560 pycom12g11950
rosa_chinensis	RchiOBHm_Chr3g0469341
rosa_laevigata	RLG00000024358
rosa_multiflora	Rmu_ssc0000394.1_g000001
rosa_roxburghii	Rroxscaffold_6G00411970
rosa_rugosa	Rorug03G0100500 Rorug03G0100600 Rorug03G0100600 Rorug03G0100700 Rorug03G0100700 Rorug03G0100800 Rorug03G0100800
rosa_samantha	Rh3AG150000 Rh3BG173600 Rh3CG164600 Rh3DG201900
rosa_wichuraiana	Rw3G014140

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc65I	GGTACC	1 cut(s)	305
AccB1I	GGYRCC	2 cut(s)	305, 986
AccB7I	CCANNNNNTGG	2 cut(s)	377, 807
AciI	CCGC	2 cut(s)	242, 1539
AclWI	GGATC	8 cut(s)	445, 458, 588, 589, 633, 646, 869, 1281
AcoI	YGGCCR	1 cut(s)	318
AcsI	RAATTY	1 cut(s)	1588
AcuI	CTGAAG	4 cut(s)	246, 1033, 1242, 1428
AcyI	GRCGYC	1 cut(s)	1165
AfaI	GTAC	7 cut(s)	212, 240, 307, 763, 961, 1021, 1502
AfiI	CCNNNNNNNGG	3 cut(s)	377, 807, 1158
AflIII	ACRYGT	1 cut(s)	150
AgeI	ACCGGT	1 cut(s)	1242
AgsI	TTSAA	4 cut(s)	180, 251, 1062, 1531
AjnI	CCWGG	6 cut(s)	445, 982, 1236, 1288, 1464, 1491
AjuI	GAANNNNNNNTTGG	2 cut(s)	72, 104
AleI	CACNNNNGTG	1 cut(s)	492
AluBI	AGCT	5 cut(s)	517, 603, 692, 1283, 1560
AluI	AGCT	5 cut(s)	517, 603, 692, 1283, 1560
Alw21I	GWGCWC	2 cut(s)	519, 1618
Alw26I	GTCTC	2 cut(s)	746, 1314
AlwI	GGATC	8 cut(s)	445, 458, 588, 589, 633, 646, 869, 1281
AoxI	GGCC	3 cut(s)	318, 1142, 1149
ApeKI	GCWGC	2 cut(s)	1108, 1560
ApoI	RAATTY	1 cut(s)	1588
AsiGI	ACCGGT	1 cut(s)	1242
Asp700I	GAANNNNTTC	1 cut(s)	505
Asp718I	GGTACC	1 cut(s)	305
AspA2I	CCTAGG	2 cut(s)	521, 1139
AspS9I	GGNCC	3 cut(s)	266, 425, 1240
AsuC2I	CCSGG	1 cut(s)	191
AsuHPI	GGTGA	3 cut(s)	13, 329, 644
AvaII	GGWCC	3 cut(s)	266, 425, 1240
AvrII	CCTAGG	2 cut(s)	521, 1139
BaeI	ACNNNNGTAYC	2 cut(s)	1409, 1442
BalI	TGGCCA	1 cut(s)	320
BamHI	GGATCC	2 cut(s)	450, 638
BanI	GGYRCC	2 cut(s)	305, 986
BanII	GRGCYC	2 cut(s)	113, 519
BarI	GAAGNNNNNNTAC	2 cut(s)	1401, 1433
Bbv12I	GWGCWC	2 cut(s)	519, 1618
BbvI	GCAGC	2 cut(s)	1120, 1547
BccI	CCATC	3 cut(s)	155, 277, 942
BcgI	CGANNNNNNTGC	2 cut(s)	1285, 1319
BciT130I	CCWGG	6 cut(s)	447, 984, 1238, 1290, 1466, 1493
BciVI	GTATCC	1 cut(s)	553
BclI	TGATCA	1 cut(s)	1309
BcnI	CCSGG	1 cut(s)	191
BcoDI	GTCTC	2 cut(s)	746, 1314
BfaI	CTAG	7 cut(s)	354, 522, 600, 689, 693, 759, 1140
BfmI	CTRYAG	4 cut(s)	141, 490, 528, 604
BfuI	GTATCC	1 cut(s)	553
BglI	GCCNNNNNGGC	1 cut(s)	1052
BglII	AGATCT	1 cut(s)	1034
BisI	GCNGC	2 cut(s)	1109, 1561
BlnI	CCTAGG	2 cut(s)	521, 1139
BlsI	GCNGC	2 cut(s)	1110, 1562
BmcAI	AGTACT	1 cut(s)	961
Bme1390I	CCNGG	7 cut(s)	191, 447, 984, 1238, 1290, 1466, 1493
Bme18I	GGWCC	3 cut(s)	266, 425, 1240
BmgT120I	GGNCC	3 cut(s)	266, 425, 1240
BmrFI	CCNGG	7 cut(s)	191, 447, 984, 1238, 1290, 1466, 1493
BmsI	GCATC	5 cut(s)	247, 298, 1094, 1104, 1572
BoxI	GACNNNNGTC	1 cut(s)	366
BpmI	CTGGAG	2 cut(s)	834, 1220
Bpu10I	CCTNAGC	1 cut(s)	991
BpuMI	CCSGG	1 cut(s)	191
Bsa29I	ATCGAT	1 cut(s)	768
BsaHI	GRCGYC	1 cut(s)	1165
BsaJI	CCNNGG	8 cut(s)	197, 376, 445, 446, 521, 575, 1139, 1289
BsaWI	WCCGGW	1 cut(s)	1242
Bsc4I	CCNNNNNNNGG	3 cut(s)	377, 807, 1158
Bse118I	RCCGGY	2 cut(s)	660, 1242
Bse1I	ACTGG	4 cut(s)	293, 321, 364, 1145
BseBI	CCWGG	6 cut(s)	447, 984, 1238, 1290, 1466, 1493
BseCI	ATCGAT	1 cut(s)	768
BseDI	CCNNGG	8 cut(s)	197, 376, 445, 446, 521, 575, 1139, 1289
BseGI	GGATG	5 cut(s)	289, 1135, 1200, 1474, 1519
BseLI	CCNNNNNNNGG	3 cut(s)	377, 807, 1158
BseMII	CTCAG	3 cut(s)	456, 504, 1245
BseNI	ACTGG	4 cut(s)	293, 321, 364, 1145
BseRI	GAGGAG	2 cut(s)	819, 1352
BseXI	GCAGC	2 cut(s)	1120, 1547
BseYI	CCCAGC	3 cut(s)	102, 1042, 1279
Bsh1285I	CGRYCG	1 cut(s)	768
BshFI	GGCC	3 cut(s)	320, 1144, 1151
BshNI	GGYRCC	2 cut(s)	305, 986
BshTI	ACCGGT	1 cut(s)	1242
BshVI	ATCGAT	1 cut(s)	768
BsiEI	CGRYCG	1 cut(s)	768
BsiHKAI	GWGCWC	2 cut(s)	519, 1618
BsiSI	CCGG	3 cut(s)	191, 661, 1243
BslFI	GGGAC	2 cut(s)	1092, 1202
BslI	CCNNNNNNNGG	3 cut(s)	377, 807, 1158
BsmAI	GTCTC	2 cut(s)	746, 1314
BsmFI	GGGAC	2 cut(s)	1092, 1202
BsmI	GAATGC	1 cut(s)	171
BsnI	GGCC	3 cut(s)	320, 1144, 1151
Bsp1286I	GDGCHC	3 cut(s)	113, 519, 1618
BspACI	CCGC	2 cut(s)	242, 1539
BspANI	GGCC	3 cut(s)	320, 1144, 1151
BspCNI	CTCAG	3 cut(s)	457, 505, 1246
BspDI	ATCGAT	1 cut(s)	768
BspHI	TCATGA	3 cut(s)	274, 871, 937
BspMAI	CTGCAG	1 cut(s)	532
BspPI	GGATC	8 cut(s)	445, 458, 588, 589, 633, 646, 869, 1281
BspQI	GCTCTTC	1 cut(s)	1623
BspT107I	GGYRCC	2 cut(s)	305, 986
BsrFI	RCCGGY	2 cut(s)	660, 1242
BsrI	ACTGG	4 cut(s)	293, 321, 364, 1145
BssAI	RCCGGY	2 cut(s)	660, 1242
BssECI	CCNNGG	8 cut(s)	197, 376, 445, 446, 521, 575, 1139, 1289
BssNI	GRCGYC	1 cut(s)	1165
BssT1I	CCWWGG	4 cut(s)	376, 521, 575, 1139
Bst2UI	CCWGG	6 cut(s)	447, 984, 1238, 1290, 1466, 1493
Bst4CI	ACNGT	2 cut(s)	125, 1003
Bst6I	CTCTTC	4 cut(s)	220, 1218, 1491, 1623
BstACI	GRCGYC	1 cut(s)	1165
BstAPI	GCANNNNNTGC	1 cut(s)	1114
BstDEI	CTNAG	5 cut(s)	465, 513, 991, 1254, 1370
BstF5I	GGATG	5 cut(s)	289, 1135, 1200, 1474, 1519
BstMAI	GTCTC	2 cut(s)	746, 1314
BstMCI	CGRYCG	1 cut(s)	768
BstMWI	GCNNNNNNNGC	4 cut(s)	108, 341, 1052, 1114
BstNI	CCWGG	6 cut(s)	447, 984, 1238, 1290, 1466, 1493
BstNSI	RCATGY	3 cut(s)	154, 574, 1085
BstPAI	GACNNNNGTC	1 cut(s)	366
BstSCI	CCNGG	7 cut(s)	189, 445, 982, 1236, 1288, 1464, 1491
BstSFI	CTRYAG	4 cut(s)	141, 490, 528, 604
BstV1I	GCAGC	2 cut(s)	1120, 1547
BstX2I	RGATCY	3 cut(s)	450, 638, 1034
BstYI	RGATCY	3 cut(s)	450, 638, 1034
Bsu15I	ATCGAT	1 cut(s)	768
BsuI	GTATCC	1 cut(s)	553
BsuRI	GGCC	3 cut(s)	320, 1144, 1151
BsuTUI	ATCGAT	1 cut(s)	768
BtsCI	GGATG	5 cut(s)	289, 1135, 1200, 1474, 1519
BtsIMutI	CAGTG	3 cut(s)	328, 371, 1152
CciI	TCATGA	3 cut(s)	274, 871, 937
Cfr10I	RCCGGY	2 cut(s)	660, 1242
Cfr13I	GGNCC	3 cut(s)	266, 425, 1240
ClaI	ATCGAT	1 cut(s)	768
CseI	GACGC	1 cut(s)	1154
Csp6I	GTAC	7 cut(s)	211, 239, 306, 762, 960, 1020, 1501
CspAI	ACCGGT	1 cut(s)	1242
CviQI	GTAC	7 cut(s)	211, 239, 306, 762, 960, 1020, 1501
DdeI	CTNAG	5 cut(s)	465, 513, 991, 1254, 1370
EaeI	YGGCCR	1 cut(s)	318
Eam1104I	CTCTTC	4 cut(s)	220, 1218, 1491, 1623
EarI	CTCTTC	4 cut(s)	220, 1218, 1491, 1623
Ecl136II	GAGCTC	1 cut(s)	517
Eco130I	CCWWGG	4 cut(s)	376, 521, 575, 1139
Eco24I	GRGCYC	2 cut(s)	113, 519
Eco47I	GGWCC	3 cut(s)	266, 425, 1240
Eco53kI	GAGCTC	1 cut(s)	517
Eco57I	CTGAAG	4 cut(s)	246, 1033, 1242, 1428
EcoICRI	GAGCTC	1 cut(s)	517
EcoO109I	RGGNCCY	1 cut(s)	425
EcoRII	CCWGG	6 cut(s)	445, 982, 1236, 1288, 1464, 1491
EcoT14I	CCWWGG	4 cut(s)	376, 521, 575, 1139
EcoT22I	ATGCAT	1 cut(s)	1087
EcoT38I	GRGCYC	2 cut(s)	113, 519
ErhI	CCWWGG	4 cut(s)	376, 521, 575, 1139
FaqI	GGGAC	2 cut(s)	1092, 1202
FauNDI	CATATG	1 cut(s)	205
FbaI	TGATCA	1 cut(s)	1309
Fnu4HI	GCNGC	2 cut(s)	1109, 1561
FokI	GGATG	5 cut(s)	276, 1122, 1207, 1481, 1526
FriOI	GRGCYC	2 cut(s)	113, 519
Fsp4HI	GCNGC	2 cut(s)	1109, 1561
FspBI	CTAG	7 cut(s)	354, 522, 600, 689, 693, 759, 1140
GluI	GCNGC	2 cut(s)	1109, 1561
GsaI	CCCAGC	3 cut(s)	106, 1046, 1283
GsuI	CTGGAG	2 cut(s)	834, 1220
HaeIII	GGCC	3 cut(s)	320, 1144, 1151
HapII	CCGG	3 cut(s)	191, 661, 1243
HgaI	GACGC	1 cut(s)	1154
Hin1I	GRCGYC	1 cut(s)	1165
HinfI	GANTC	5 cut(s)	64, 618, 680, 1215, 1226
HpaII	CCGG	3 cut(s)	191, 661, 1243
HphI	GGTGA	3 cut(s)	13, 329, 644
Hpy166II	GTNNAC	2 cut(s)	21, 553
Hpy188I	TCNGA	8 cut(s)	198, 466, 514, 667, 1096, 1255, 1408, 1456
Hpy188III	TCNNGA	7 cut(s)	275, 851, 872, 938, 1544, 1567, 1622
Hpy8I	GTNNAC	2 cut(s)	21, 553
HpyAV	CCTTC	8 cut(s)	357, 414, 465, 831, 1057, 1094, 1466, 1627
HpyCH4III	ACNGT	2 cut(s)	125, 1003
HpyCH4V	TGCA	9 cut(s)	344, 530, 721, 1085, 1108, 1484, 1526, 1563, 1605
HpyF10VI	GCNNNNNNNGC	4 cut(s)	108, 341, 1052, 1114
HpyF3I	CTNAG	5 cut(s)	465, 513, 991, 1254, 1370
Hsp92I	GRCGYC	1 cut(s)	1165
KpnI	GGTACC	1 cut(s)	309
Ksp22I	TGATCA	1 cut(s)	1309
LguI	GCTCTTC	1 cut(s)	1623
LmnI	GCTCC	4 cut(s)	199, 522, 832, 853
Lsp1109I	GCAGC	2 cut(s)	1120, 1547
LweI	GCATC	5 cut(s)	247, 298, 1094, 1104, 1572
MaeI	CTAG	7 cut(s)	354, 522, 600, 689, 693, 759, 1140
MaeIII	GTNAC	2 cut(s)	632, 1541
MboII	GAAGA	7 cut(s)	207, 342, 1050, 1235, 1421, 1508, 1610
MflI	RGATCY	3 cut(s)	450, 638, 1034
MhlI	GDGCHC	3 cut(s)	113, 519, 1618
MlsI	TGGCCA	1 cut(s)	320
MluCI	AATT	7 cut(s)	58, 181, 533, 624, 1123, 1485, 1588
MluNI	TGGCCA	1 cut(s)	320
MlyI	GAGTC	4 cut(s)	612, 689, 1224, 1235
Mox20I	TGGCCA	1 cut(s)	320
Mph1103I	ATGCAT	1 cut(s)	1087
MroXI	GAANNNNTTC	1 cut(s)	505
MscI	TGGCCA	1 cut(s)	320
MseI	TTAA	1 cut(s)	1430
MslI	CAYNNNNRTG	4 cut(s)	492, 590, 819, 1095
Msp20I	TGGCCA	1 cut(s)	320
MspI	CCGG	3 cut(s)	191, 661, 1243
MspR9I	CCNGG	7 cut(s)	191, 447, 984, 1238, 1290, 1466, 1493
Mva1269I	GAATGC	1 cut(s)	171
MvaI	CCWGG	6 cut(s)	447, 984, 1238, 1290, 1466, 1493
MwoI	GCNNNNNNNGC	4 cut(s)	108, 341, 1052, 1114
NciI	CCSGG	1 cut(s)	191
NdeI	CATATG	1 cut(s)	205
NmuCI	GTSAC	2 cut(s)	632, 1541
NsiI	ATGCAT	1 cut(s)	1087
NspI	RCATGY	3 cut(s)	154, 574, 1085
OliI	CACNNNNGTG	1 cut(s)	492
PagI	TCATGA	3 cut(s)	274, 871, 937
PasI	CCCWGGG	1 cut(s)	446
PciI	ACATGT	1 cut(s)	150
PciSI	GCTCTTC	1 cut(s)	1623
PcsI	WCGNNNNNNNCGW	1 cut(s)	1371
PctI	GAATGC	1 cut(s)	171
PdmI	GAANNNNTTC	1 cut(s)	505
PfeI	GAWTC	1 cut(s)	64
PflMI	CCANNNNNTGG	2 cut(s)	377, 807
PfoI	TCCNGGA	2 cut(s)	1236, 1464
PinAI	ACCGGT	1 cut(s)	1242
PkrI	GCNGC	2 cut(s)	1110, 1562
Ple19I	CGATCG	1 cut(s)	768
PleI	GAGTC	4 cut(s)	612, 688, 1223, 1234
PpsI	GAGTC	4 cut(s)	612, 688, 1223, 1234
PpuMI	RGGWCCY	1 cut(s)	425
PscI	ACATGT	1 cut(s)	150
PshAI	GACNNNNGTC	1 cut(s)	366
Psp124BI	GAGCTC	1 cut(s)	519
Psp5II	RGGWCCY	1 cut(s)	425
Psp6I	CCWGG	6 cut(s)	445, 982, 1236, 1288, 1464, 1491
PspFI	CCCAGC	3 cut(s)	102, 1042, 1279
PspGI	CCWGG	6 cut(s)	445, 982, 1236, 1288, 1464, 1491
PspPI	GGNCC	3 cut(s)	266, 425, 1240
PspPPI	RGGWCCY	1 cut(s)	425
PsrI	GAACNNNNNNTAC	2 cut(s)	996, 1028
PstI	CTGCAG	1 cut(s)	532
PsuI	RGATCY	3 cut(s)	450, 638, 1034
PvuI	CGATCG	1 cut(s)	768
RsaI	GTAC	7 cut(s)	212, 240, 307, 763, 961, 1021, 1502
RsaNI	GTAC	7 cut(s)	211, 239, 306, 762, 960, 1020, 1501
RseI	CAYNNNNRTG	4 cut(s)	492, 590, 819, 1095
SacI	GAGCTC	1 cut(s)	519
SapI	GCTCTTC	1 cut(s)	1623
SaqAI	TTAA	1 cut(s)	1430
SatI	GCNGC	2 cut(s)	1109, 1561
Sau96I	GGNCC	3 cut(s)	266, 425, 1240
ScaI	AGTACT	1 cut(s)	961
SchI	GAGTC	4 cut(s)	612, 689, 1224, 1235
ScrFI	CCNGG	7 cut(s)	191, 447, 984, 1238, 1290, 1466, 1493
SduI	GDGCHC	3 cut(s)	113, 519, 1618
SfaNI	GCATC	5 cut(s)	247, 298, 1094, 1104, 1572
SfcI	CTRYAG	4 cut(s)	141, 490, 528, 604
SinI	GGWCC	3 cut(s)	266, 425, 1240
SmiMI	CAYNNNNRTG	4 cut(s)	492, 590, 819, 1095
Sse9I	AATT	7 cut(s)	58, 181, 533, 624, 1123, 1485, 1588
SsiI	CCGC	2 cut(s)	242, 1539
SspMI	CTAG	7 cut(s)	354, 522, 600, 689, 693, 759, 1140
SstI	GAGCTC	1 cut(s)	519
StyD4I	CCNGG	7 cut(s)	189, 445, 982, 1236, 1288, 1464, 1491
StyI	CCWWGG	4 cut(s)	376, 521, 575, 1139
TaaI	ACNGT	2 cut(s)	125, 1003
TaqI	TCGA	4 cut(s)	707, 768, 950, 1295
TasI	AATT	7 cut(s)	58, 181, 533, 624, 1123, 1485, 1588
TatI	WGTACW	2 cut(s)	959, 1500
TfiI	GAWTC	1 cut(s)	64
Tru1I	TTAA	1 cut(s)	1430
Tru9I	TTAA	1 cut(s)	1430
TscAI	CASTG	3 cut(s)	328, 371, 1152
TseFI	GTSAC	2 cut(s)	632, 1541
TseI	GCWGC	2 cut(s)	1108, 1560
Tsp45I	GTSAC	2 cut(s)	632, 1541
TspDTI	ATGAA	7 cut(s)	236, 934, 1113, 1440, 1467, 1485, 1598
TspGWI	ACGGA	2 cut(s)	432, 651
TspRI	CASTG	3 cut(s)	328, 371, 1152
Van91I	CCANNNNNTGG	2 cut(s)	377, 807
VpaK11BI	GGWCC	3 cut(s)	266, 425, 1240
XapI	RAATTY	1 cut(s)	1588
XceI	RCATGY	3 cut(s)	154, 574, 1085
XmaJI	CCTAGG	2 cut(s)	521, 1139
XmnI	GAANNNNTTC	1 cut(s)	505
XspI	CTAG	7 cut(s)	354, 522, 600, 689, 693, 759, 1140
ZrmI	AGTACT	1 cut(s)	961
Zsp2I	ATGCAT	1 cut(s)	1087

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.