RING-H2 zinc finger domain
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G37150 AT2G37150 AT2G37150 AT2G37150 AT2G37150 AT2G37150 AT2G37150 AT2G37150 AT2G37150 AT2G37150 AT2G37150 AT2G37150 AT2G37150 AT2G37150 AT2G37150 |
| fragaria_vesca | FvH4_6g15650 FvH4_6g15650 FvH4_6g15650 FvH4_6g15650 |
| malus_domestica | MD04G1100800.v1.1 MD12G1120500.v1.1 |
| prunus_persica | Prupe.6G238800_v2.0.a1 |
| pyrus_communis | pycom04g09560 pycom12g11950 |
| rosa_chinensis | RchiOBHm_Chr3g0469341 |
| rosa_laevigata | RLG00000024358 |
| rosa_multiflora | Rmu_ssc0000394.1_g000001 |
| rosa_roxburghii | Rroxscaffold_6G00411970 |
| rosa_rugosa | Rorug03G0100500 Rorug03G0100600 Rorug03G0100600 Rorug03G0100700 Rorug03G0100700 Rorug03G0100800 Rorug03G0100800 |
| rosa_samantha | Rh3AG150000 Rh3BG173600 Rh3CG164600 Rh3DG201900 |
| rosa_wichuraiana | Rw3G014140 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 706 |
| AccB1I | GGYRCC | 1 cut(s) | 995 |
| AccI | GTMKAC | 1 cut(s) | 939 |
| AciI | CCGC | 2 cut(s) | 113, 191 |
| AclWI | GGATC | 7 cut(s) | 47, 275, 448, 461, 588, 649, 875 |
| AcoI | YGGCCR | 1 cut(s) | 321 |
| AcsI | RAATTY | 2 cut(s) | 33, 742 |
| AcuI | CTGAAG | 2 cut(s) | 840, 1251 |
| AdeI | CACNNNGTG | 1 cut(s) | 302 |
| AfaI | GTAC | 2 cut(s) | 310, 766 |
| AfeI | AGCGCT | 1 cut(s) | 499 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 810, 839, 1109 |
| AflIII | ACRYGT | 1 cut(s) | 1306 |
| AgsI | TTSAA | 4 cut(s) | 22, 157, 290, 1071 |
| AhlI | ACTAGT | 1 cut(s) | 1238 |
| AjnI | CCWGG | 3 cut(s) | 448, 962, 991 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 72, 104 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 137, 169 |
| AluBI | AGCT | 5 cut(s) | 360, 606, 789, 932, 1325 |
| AluI | AGCT | 5 cut(s) | 360, 606, 789, 932, 1325 |
| Alw21I | GWGCWC | 1 cut(s) | 791 |
| Alw26I | GTCTC | 2 cut(s) | 1229, 1247 |
| AlwI | GGATC | 7 cut(s) | 47, 275, 448, 461, 588, 649, 875 |
| Aor51HI | AGCGCT | 1 cut(s) | 499 |
| AoxI | GGCC | 4 cut(s) | 321, 428, 1088, 1151 |
| ApeKI | GCWGC | 5 cut(s) | 477, 903, 971, 1074, 1322 |
| ApoI | RAATTY | 2 cut(s) | 33, 742 |
| AspA2I | CCTAGG | 1 cut(s) | 1148 |
| AspLEI | GCGC | 1 cut(s) | 500 |
| AspS9I | GGNCC | 3 cut(s) | 269, 428, 1088 |
| AsuHPI | GGTGA | 4 cut(s) | 332, 590, 647, 822 |
| AsuII | TTCGAA | 1 cut(s) | 179 |
| AvaII | GGWCC | 1 cut(s) | 269 |
| AvrII | CCTAGG | 1 cut(s) | 1148 |
| BalI | TGGCCA | 1 cut(s) | 323 |
| BamHI | GGATCC | 1 cut(s) | 453 |
| BanI | GGYRCC | 1 cut(s) | 995 |
| BanII | GRGCYC | 1 cut(s) | 791 |
| BauI | CACGAG | 1 cut(s) | 481 |
| Bbv12I | GWGCWC | 1 cut(s) | 791 |
| BbvI | GCAGC | 4 cut(s) | 489, 915, 958, 1086 |
| BccI | CCATC | 4 cut(s) | 155, 280, 351, 355 |
| BceAI | ACGGC | 1 cut(s) | 559 |
| BciT130I | CCWGG | 3 cut(s) | 450, 964, 993 |
| BcoDI | GTCTC | 2 cut(s) | 1229, 1247 |
| BcuI | ACTAGT | 1 cut(s) | 1238 |
| BfaI | CTAG | 8 cut(s) | 102, 306, 522, 692, 762, 1047, 1149, 1239 |
| BfmI | CTRYAG | 5 cut(s) | 462, 493, 528, 607, 1161 |
| BfoI | RGCGCY | 1 cut(s) | 501 |
| BglII | AGATCT | 2 cut(s) | 524, 1043 |
| BisI | GCNGC | 5 cut(s) | 478, 904, 972, 1075, 1323 |
| BlnI | CCTAGG | 1 cut(s) | 1148 |
| BlsI | GCNGC | 5 cut(s) | 479, 905, 973, 1076, 1324 |
| BmcAI | AGTACT | 1 cut(s) | 310 |
| Bme1390I | CCNGG | 3 cut(s) | 450, 964, 993 |
| Bme18I | GGWCC | 1 cut(s) | 269 |
| BmgT120I | GGNCC | 3 cut(s) | 269, 428, 1088 |
| BmiI | GGNNCC | 5 cut(s) | 65, 188, 455, 815, 997 |
| BmrFI | CCNGG | 3 cut(s) | 450, 964, 993 |
| BmsI | GCATC | 3 cut(s) | 35, 250, 1273 |
| Bpu14I | TTCGAA | 1 cut(s) | 179 |
| BpuEI | CTTGAG | 2 cut(s) | 241, 1078 |
| BsaBI | GATNNNNATC | 1 cut(s) | 1218 |
| BsaJI | CCNNGG | 4 cut(s) | 379, 449, 575, 1148 |
| BsaWI | WCCGGW | 1 cut(s) | 256 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 810, 839, 1109 |
| Bse1I | ACTGG | 3 cut(s) | 140, 324, 1154 |
| Bse3DI | GCAATG | 1 cut(s) | 424 |
| Bse8I | GATNNNNATC | 1 cut(s) | 1218 |
| BseBI | CCWGG | 3 cut(s) | 450, 964, 993 |
| BseDI | CCNNGG | 4 cut(s) | 379, 449, 575, 1148 |
| BseGI | GGATG | 7 cut(s) | 13, 265, 292, 343, 1099, 1144, 1209 |
| BseJI | GATNNNNATC | 1 cut(s) | 1218 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 810, 839, 1109 |
| BseMI | GCAATG | 1 cut(s) | 424 |
| BseMII | CTCAG | 2 cut(s) | 1119, 1254 |
| BseNI | ACTGG | 3 cut(s) | 140, 324, 1154 |
| BseRI | GAGGAG | 1 cut(s) | 825 |
| BseXI | GCAGC | 4 cut(s) | 489, 915, 958, 1086 |
| BseYI | CCCAGC | 2 cut(s) | 107, 602 |
| BshFI | GGCC | 4 cut(s) | 323, 430, 1090, 1153 |
| BshNI | GGYRCC | 1 cut(s) | 995 |
| BsiHKAI | GWGCWC | 1 cut(s) | 791 |
| BsiSI | CCGG | 1 cut(s) | 257 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 810, 839, 1109 |
| BsmAI | GTCTC | 2 cut(s) | 1229, 1247 |
| BsmI | GAATGC | 2 cut(s) | 171, 374 |
| BsnI | GGCC | 4 cut(s) | 323, 430, 1090, 1153 |
| Bsp119I | TTCGAA | 1 cut(s) | 179 |
| Bsp1286I | GDGCHC | 1 cut(s) | 791 |
| Bsp19I | CCATGG | 1 cut(s) | 379 |
| BspACI | CCGC | 2 cut(s) | 113, 191 |
| BspANI | GGCC | 4 cut(s) | 323, 430, 1090, 1153 |
| BspCNI | CTCAG | 2 cut(s) | 1120, 1255 |
| BspHI | TCATGA | 2 cut(s) | 277, 877 |
| BspLI | GGNNCC | 5 cut(s) | 65, 188, 455, 815, 997 |
| BspPI | GGATC | 7 cut(s) | 47, 275, 448, 461, 588, 649, 875 |
| BspT104I | TTCGAA | 1 cut(s) | 179 |
| BspT107I | GGYRCC | 1 cut(s) | 995 |
| BsrDI | GCAATG | 1 cut(s) | 424 |
| BsrI | ACTGG | 3 cut(s) | 140, 324, 1154 |
| BssECI | CCNNGG | 4 cut(s) | 379, 449, 575, 1148 |
| BssNAI | GTATAC | 1 cut(s) | 940 |
| BssSI | CACGAG | 1 cut(s) | 481 |
| BssT1I | CCWWGG | 2 cut(s) | 379, 1148 |
| Bst1107I | GTATAC | 1 cut(s) | 940 |
| Bst2BI | CACGAG | 1 cut(s) | 481 |
| Bst2UI | CCWGG | 3 cut(s) | 450, 964, 993 |
| Bst4CI | ACNGT | 4 cut(s) | 230, 368, 1012, 1165 |
| Bst6I | CTCTTC | 2 cut(s) | 418, 1227 |
| BstBI | TTCGAA | 1 cut(s) | 179 |
| BstDEI | CTNAG | 2 cut(s) | 1128, 1263 |
| BstDSI | CCRYGG | 2 cut(s) | 379, 575 |
| BstF5I | GGATG | 7 cut(s) | 13, 265, 292, 343, 1099, 1144, 1209 |
| BstH2I | RGCGCY | 1 cut(s) | 501 |
| BstHHI | GCGC | 1 cut(s) | 500 |
| BstMAI | GTCTC | 2 cut(s) | 1229, 1247 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 436, 483 |
| BstNI | CCWGG | 3 cut(s) | 450, 964, 993 |
| BstNSI | RCATGY | 2 cut(s) | 574, 1310 |
| BstSCI | CCNGG | 3 cut(s) | 448, 962, 991 |
| BstSFI | CTRYAG | 5 cut(s) | 462, 493, 528, 607, 1161 |
| BstV1I | GCAGC | 4 cut(s) | 489, 915, 958, 1086 |
| BstX2I | RGATCY | 4 cut(s) | 453, 524, 641, 1043 |
| BstYI | RGATCY | 4 cut(s) | 453, 524, 641, 1043 |
| BstZ17I | GTATAC | 1 cut(s) | 940 |
| BsuRI | GGCC | 4 cut(s) | 323, 430, 1090, 1153 |
| BtgI | CCRYGG | 2 cut(s) | 379, 575 |
| BtsCI | GGATG | 7 cut(s) | 13, 265, 292, 343, 1099, 1144, 1209 |
| BtsIMutI | CAGTG | 4 cut(s) | 147, 235, 331, 1161 |
| CciI | TCATGA | 2 cut(s) | 277, 877 |
| CfoI | GCGC | 1 cut(s) | 500 |
| Cfr13I | GGNCC | 3 cut(s) | 269, 428, 1088 |
| Csp6I | GTAC | 2 cut(s) | 309, 765 |
| CviQI | GTAC | 2 cut(s) | 309, 765 |
| DdeI | CTNAG | 2 cut(s) | 1128, 1263 |
| DraIII | CACNNNGTG | 1 cut(s) | 302 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 706 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 706 |
| EaeI | YGGCCR | 1 cut(s) | 321 |
| Eam1104I | CTCTTC | 2 cut(s) | 418, 1227 |
| EarI | CTCTTC | 2 cut(s) | 418, 1227 |
| Ecl136II | GAGCTC | 1 cut(s) | 789 |
| Eco130I | CCWWGG | 2 cut(s) | 379, 1148 |
| Eco24I | GRGCYC | 1 cut(s) | 791 |
| Eco32I | GATATC | 1 cut(s) | 1220 |
| Eco47I | GGWCC | 1 cut(s) | 269 |
| Eco47III | AGCGCT | 1 cut(s) | 499 |
| Eco53kI | GAGCTC | 1 cut(s) | 789 |
| Eco57I | CTGAAG | 2 cut(s) | 840, 1251 |
| EcoICRI | GAGCTC | 1 cut(s) | 789 |
| EcoRII | CCWGG | 3 cut(s) | 448, 962, 991 |
| EcoRV | GATATC | 1 cut(s) | 1220 |
| EcoT14I | CCWWGG | 2 cut(s) | 379, 1148 |
| EcoT22I | ATGCAT | 1 cut(s) | 171 |
| EcoT38I | GRGCYC | 1 cut(s) | 791 |
| ErhI | CCWWGG | 2 cut(s) | 379, 1148 |
| FauI | CCCGC | 2 cut(s) | 106, 198 |
| FauNDI | CATATG | 2 cut(s) | 69, 205 |
| FblI | GTMKAC | 1 cut(s) | 939 |
| Fnu4HI | GCNGC | 5 cut(s) | 478, 904, 972, 1075, 1323 |
| FokI | GGATG | 6 cut(s) | 272, 279, 330, 1086, 1131, 1216 |
| FriOI | GRGCYC | 1 cut(s) | 791 |
| Fsp4HI | GCNGC | 5 cut(s) | 478, 904, 972, 1075, 1323 |
| FspBI | CTAG | 8 cut(s) | 102, 306, 522, 692, 762, 1047, 1149, 1239 |
| GlaI | GCGC | 1 cut(s) | 499 |
| GluI | GCNGC | 5 cut(s) | 478, 904, 972, 1075, 1323 |
| GsaI | CCCAGC | 2 cut(s) | 111, 606 |
| HaeII | RGCGCY | 1 cut(s) | 501 |
| HaeIII | GGCC | 4 cut(s) | 323, 430, 1090, 1153 |
| HapII | CCGG | 1 cut(s) | 257 |
| HhaI | GCGC | 1 cut(s) | 500 |
| Hin6I | GCGC | 1 cut(s) | 498 |
| HinP1I | GCGC | 1 cut(s) | 498 |
| HincII | GTYRAC | 1 cut(s) | 754 |
| HindII | GTYRAC | 1 cut(s) | 754 |
| HinfI | GANTC | 2 cut(s) | 595, 683 |
| HpaII | CCGG | 1 cut(s) | 257 |
| HphI | GGTGA | 4 cut(s) | 332, 590, 647, 822 |
| Hpy166II | GTNNAC | 3 cut(s) | 553, 754, 940 |
| Hpy188I | TCNGA | 8 cut(s) | 57, 514, 670, 786, 859, 1129, 1231, 1264 |
| Hpy188III | TCNNGA | 4 cut(s) | 278, 522, 878, 1103 |
| Hpy8I | GTNNAC | 3 cut(s) | 553, 754, 940 |
| Hpy99I | CGWCG | 1 cut(s) | 372 |
| HpyAV | CCTTC | 5 cut(s) | 186, 468, 837, 864, 1103 |
| HpyCH4III | ACNGT | 4 cut(s) | 230, 368, 1012, 1165 |
| HpyCH4V | TGCA | 5 cut(s) | 169, 740, 1117, 1286, 1322 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 436, 483 |
| HpyF3I | CTNAG | 2 cut(s) | 1128, 1263 |
| HspAI | GCGC | 1 cut(s) | 498 |
| LmnI | GCTCC | 2 cut(s) | 794, 1330 |
| Lsp1109I | GCAGC | 4 cut(s) | 489, 915, 958, 1086 |
| LweI | GCATC | 3 cut(s) | 35, 250, 1273 |
| MaeI | CTAG | 8 cut(s) | 102, 306, 522, 692, 762, 1047, 1149, 1239 |
| MaeIII | GTNAC | 4 cut(s) | 1028, 1093, 1133, 1175 |
| MboII | GAAGA | 4 cut(s) | 342, 435, 1059, 1244 |
| MflI | RGATCY | 4 cut(s) | 453, 524, 641, 1043 |
| MhlI | GDGCHC | 1 cut(s) | 791 |
| MlsI | TGGCCA | 1 cut(s) | 323 |
| MluCI | AATT | 5 cut(s) | 33, 58, 181, 533, 742 |
| MluNI | TGGCCA | 1 cut(s) | 323 |
| MlyI | GAGTC | 1 cut(s) | 692 |
| MmeI | TCCRAC | 2 cut(s) | 711, 983 |
| Mox20I | TGGCCA | 1 cut(s) | 323 |
| Mph1103I | ATGCAT | 1 cut(s) | 171 |
| MscI | TGGCCA | 1 cut(s) | 323 |
| MseI | TTAA | 1 cut(s) | 915 |
| MslI | CAYNNNNRTG | 2 cut(s) | 590, 1104 |
| Msp20I | TGGCCA | 1 cut(s) | 323 |
| MspI | CCGG | 1 cut(s) | 257 |
| MspR9I | CCNGG | 3 cut(s) | 450, 964, 993 |
| Mva1269I | GAATGC | 2 cut(s) | 171, 374 |
| MvaI | CCWGG | 3 cut(s) | 450, 964, 993 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 436, 483 |
| NcoI | CCATGG | 1 cut(s) | 379 |
| NdeI | CATATG | 2 cut(s) | 69, 205 |
| NlaIV | GGNNCC | 5 cut(s) | 65, 188, 455, 815, 997 |
| NmuCI | GTSAC | 1 cut(s) | 1093 |
| NsiI | ATGCAT | 1 cut(s) | 171 |
| NspI | RCATGY | 2 cut(s) | 574, 1310 |
| NspV | TTCGAA | 1 cut(s) | 179 |
| PagI | TCATGA | 2 cut(s) | 277, 877 |
| PciI | ACATGT | 1 cut(s) | 1306 |
| PctI | GAATGC | 2 cut(s) | 171, 374 |
| PfeI | GAWTC | 1 cut(s) | 595 |
| PkrI | GCNGC | 5 cut(s) | 479, 905, 973, 1076, 1324 |
| PleI | GAGTC | 1 cut(s) | 691 |
| PpsI | GAGTC | 1 cut(s) | 691 |
| PscI | ACATGT | 1 cut(s) | 1306 |
| Psp124BI | GAGCTC | 1 cut(s) | 791 |
| Psp6I | CCWGG | 3 cut(s) | 448, 962, 991 |
| PspFI | CCCAGC | 2 cut(s) | 107, 602 |
| PspGI | CCWGG | 3 cut(s) | 448, 962, 991 |
| PspN4I | GGNNCC | 5 cut(s) | 65, 188, 455, 815, 997 |
| PspPI | GGNCC | 3 cut(s) | 269, 428, 1088 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 1005, 1037 |
| PsuI | RGATCY | 4 cut(s) | 453, 524, 641, 1043 |
| RsaI | GTAC | 2 cut(s) | 310, 766 |
| RsaNI | GTAC | 2 cut(s) | 309, 765 |
| RseI | CAYNNNNRTG | 2 cut(s) | 590, 1104 |
| SacI | GAGCTC | 1 cut(s) | 791 |
| SaqAI | TTAA | 1 cut(s) | 915 |
| SatI | GCNGC | 5 cut(s) | 478, 904, 972, 1075, 1323 |
| Sau96I | GGNCC | 3 cut(s) | 269, 428, 1088 |
| ScaI | AGTACT | 1 cut(s) | 310 |
| SchI | GAGTC | 1 cut(s) | 692 |
| ScrFI | CCNGG | 3 cut(s) | 450, 964, 993 |
| SduI | GDGCHC | 1 cut(s) | 791 |
| SfaNI | GCATC | 3 cut(s) | 35, 250, 1273 |
| SfcI | CTRYAG | 5 cut(s) | 462, 493, 528, 607, 1161 |
| SfuI | TTCGAA | 1 cut(s) | 179 |
| SinI | GGWCC | 1 cut(s) | 269 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 590, 1104 |
| SmlI | CTYRAG | 2 cut(s) | 220, 1057 |
| SmoI | CTYRAG | 2 cut(s) | 220, 1057 |
| SpeI | ACTAGT | 1 cut(s) | 1238 |
| Sse9I | AATT | 5 cut(s) | 33, 58, 181, 533, 742 |
| SsiI | CCGC | 2 cut(s) | 113, 191 |
| SspMI | CTAG | 8 cut(s) | 102, 306, 522, 692, 762, 1047, 1149, 1239 |
| SstI | GAGCTC | 1 cut(s) | 791 |
| StyD4I | CCNGG | 3 cut(s) | 448, 962, 991 |
| StyI | CCWWGG | 2 cut(s) | 379, 1148 |
| TaaI | ACNGT | 4 cut(s) | 230, 368, 1012, 1165 |
| TaqI | TCGA | 4 cut(s) | 179, 370, 710, 1222 |
| TaqII | GACCGA | 1 cut(s) | 654 |
| TasI | AATT | 5 cut(s) | 33, 58, 181, 533, 742 |
| TatI | WGTACW | 1 cut(s) | 308 |
| TfiI | GAWTC | 1 cut(s) | 595 |
| Tru1I | TTAA | 1 cut(s) | 915 |
| Tru9I | TTAA | 1 cut(s) | 915 |
| TscAI | CASTG | 4 cut(s) | 147, 235, 331, 1161 |
| TseFI | GTSAC | 1 cut(s) | 1093 |
| TseI | GCWGC | 5 cut(s) | 477, 903, 971, 1074, 1322 |
| Tsp45I | GTSAC | 1 cut(s) | 1093 |
| TspDTI | ATGAA | 5 cut(s) | 86, 498, 943, 1122, 1248 |
| TspGWI | ACGGA | 1 cut(s) | 6 |
| TspRI | CASTG | 4 cut(s) | 147, 235, 331, 1161 |
| VpaK11BI | GGWCC | 1 cut(s) | 269 |
| XapI | RAATTY | 2 cut(s) | 33, 742 |
| XbaI | TCTAGA | 1 cut(s) | 521 |
| XceI | RCATGY | 2 cut(s) | 574, 1310 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 573 |
| XmaJI | CCTAGG | 1 cut(s) | 1148 |
| XmiI | GTMKAC | 1 cut(s) | 939 |
| XspI | CTAG | 8 cut(s) | 102, 306, 522, 692, 762, 1047, 1149, 1239 |
| ZrmI | AGTACT | 1 cut(s) | 310 |
| Zsp2I | ATGCAT | 1 cut(s) | 171 |