Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000003

Orthogroup ID

OG0002650

Physical Location & Seq

Genomic Coordinates Reverse (-)

7872180 .. 7874349

Gene Structure 2170 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug03G0100500.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1611 bp

ATGAAGCGCACCATTCCTCCTCACATACTTTCAGACCTTCGTCGTCATCTTCAACCTCTCTCCTCCATCAAACAAGTCGAAACAGCCCAAGCTTTCCTCACCAAAACAGGCCTCTTCTTCACCCAGACACCTCTCCTCGCAAAGCTCATAGCTTTCGCATCTCTTTCACCACTGGGCTGCCTCTCCCACGCTCAATCGCTGTTCCAAGAAACCGCCATGGACGACCCTTTCACCTGTAGCACCATGATCAGAGCTTACACCAACAGCGATTTCCCCATCAAAGGGATTCATATCTATAATCACATGATCGTGACCCAAGTTGGGTGTGATCATTTCACTTACAATTTCGCACTCAAGGCCTGTGCGAGAGTCATGAAAGGTATGAAGAAAGATGATGCGAAGGGTTTTGGCTTGGGGATTGATTTGAAGGGAGGTGAGATTCATGGCCGGGTTTTGAAGCTGGGGTTTGATTCCGATTTGTATGTACAGAATTCGTTGCTGTTTGTATATGCTCAAGCTGGGTCTGTGGGACTTGCGCGCCAGGTGTTCGATGAAATGTCTGAGAGAAGCGTTTCGTCGTGGAACATCATGATATCTGCATATGATCAGATAACGGATTTCGAATCGGCGGACTGGCTGTTCCGGTTGATGCCTCAGAAGAATGTGGTGTCTTGGAATACGTTATTAGGGCGGCATGTTAGATTGGGCAACGTTGAGGCTGCGAAGAAGGTGTTTGAAGAGATGGTGGAGAGGGATGCGGTTTCGTGGAATTCGATGATTGCTGGTTATGTTCAGGTTAGAGATTATGGTGGAGCATTGGAGCTGTTCCGGGAAATGCAAGTTGCTGAAGTGGAAGCAACGGAAGTGACGCTTATATCGGTTTTGGGTGCTTGTGCTGAAACCGGGGAGTTGGAGATTGGAAGCAAGATTCATGAGTCGTTGAAAGGAAAGCAGCATAAGATTGAAGGGTACTTGGGGACTGCCCTTGTGGATATGTATTCTAAATGTGGCAAGTTGAGTTCAGCTTCGGAGGTGTTTAGTGGGATGAAAATGAGACCGGTTGGTTGCTGGAATGCAATGATTATGGGTTTCGCTGTCCATGGTCACTGCGAGGAAGCTTTGGAGTTGTTTGCAGATATGGAAATGCAGGTTGGTGAAGTGAAGCCGAATCGGATCACCTTTGTTGGGGTGCTCATTGCTTGTAGTCACAAGGGTTTGGTGGAAGAAGGACGCCGGTATTTCAGTTACATGATTCAAAAGTACAAAATCGTGCCTGATACTAAGCATTATGGTTGCATGGTTGATCTTCTTAGCAGGTGGGGATTGTTAGATGAAGCCTACCAGATGATCAGAGCTGTGCCTTCCCTATCAAGCTCTTTGTTGTGGAGAACCTTGTTGGGTGCTTGTAAGGTACATGGAAACGTTGAATTGGCTGAGCAATGCTTTGAGCAGCTAGCCAAATTGGAACCTCTTAAGGATGCAGATTATGTTTTGTTGTCAAACATCTACGCCGAAGCCGAGAAATGGCACGATGTCGAGCGGTTGAGGAATGAGATGGTTTGTAAGGGTGTTCCCAAAAGCCTCGGCTTCAGCCATGTAGAGATGAAATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004842 GO:0006464 GO:0006508 GO:0006511 GO:0006807 GO:0008150 GO:0008152 GO:0009056 GO:0009057 GO:0009987 GO:0010498 GO:0016567 GO:0016740 GO:0019538 GO:0019787 GO:0019941 GO:0030163 GO:0032446 GO:0036211 GO:0043161 GO:0043170 GO:0043412 GO:0043632 GO:0044237 GO:0044238 GO:0044248 GO:0044257 GO:0044260 GO:0044265 GO:0044267 GO:0051603 GO:0051865 GO:0061630 GO:0061659 GO:0070647 GO:0071704 GO:0140096 GO:1901564 GO:1901565 GO:1901575

KEGG Pathways

Metabolic & Signaling

ko03013 ko05164 map03013 map05164

Pfam Domains

Protein Families

zf-RING_2

Protein Analysis

536

Amino Acids

60.04

Weight (kDa)

6.4

Isoelectric Point (pI)

38.11

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	220 - 251	6.3e-07	PPR repeat family
PPR	PF01535	223 - 251	6e-06	PPR repeat
PPR_2	PF13041	252 - 299	2.1e-08	PPR repeat family
PPR	PF01535	254 - 280	6.5e-07	PPR repeat
PPR_2	PF13041	355 - 401	2.7e-06	PPR repeat family
PPR	PF01535	356 - 381	2.2e-06	PPR repeat
E_motif	PF20431	472 - 534	4.7e-17	E motif

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002650)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G37150 AT2G37150 AT2G37150 AT2G37150 AT2G37150 AT2G37150 AT2G37150 AT2G37150 AT2G37150 AT2G37150 AT2G37150 AT2G37150 AT2G37150 AT2G37150 AT2G37150
fragaria_vesca	FvH4_6g15650 FvH4_6g15650 FvH4_6g15650 FvH4_6g15650
malus_domestica	MD04G1100800.v1.1 MD12G1120500.v1.1
prunus_persica	Prupe.6G238800_v2.0.a1
pyrus_communis	pycom04g09560 pycom12g11950
rosa_chinensis	RchiOBHm_Chr3g0469341
rosa_laevigata	RLG00000024358
rosa_multiflora	Rmu_ssc0000394.1_g000001
rosa_roxburghii	Rroxscaffold_6G00411970
rosa_rugosa	Rorug03G0100500 Rorug03G0100600 Rorug03G0100600 Rorug03G0100700 Rorug03G0100700 Rorug03G0100800 Rorug03G0100800
rosa_samantha	Rh3AG150000 Rh3BG173600 Rh3CG164600 Rh3DG201900
rosa_wichuraiana	Rw3G014140

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1305
Acc36I	ACCTGC	2 cut(s)	1138, 1305
AccBSI	CCGCTC	1 cut(s)	1540
AccII	CGCG	1 cut(s)	538
AciI	CCGC	5 cut(s)	213, 629, 691, 758, 1540
AclI	AACGTT	2 cut(s)	711, 1422
AclWI	GGATC	1 cut(s)	1181
AcoI	YGGCCR	1 cut(s)	445
AcsI	RAATTY	2 cut(s)	490, 769
AcuI	CTGAAG	2 cut(s)	867, 1573
AcyI	GRCGYC	1 cut(s)	1231
AfaI	GTAC	4 cut(s)	486, 971, 1262, 1413
AfiI	CCNNNNNNNGG	5 cut(s)	281, 282, 321, 1185, 1524
AflII	CTTAAG	1 cut(s)	1472
AgeI	ACCGGT	1 cut(s)	1057
AgsI	TTSAA	8 cut(s)	53, 427, 457, 737, 943, 965, 1256, 1427
AjnI	CCWGG	1 cut(s)	540
AjuI	GAANNNNNNNTTGG	4 cut(s)	254, 286, 1134, 1166
AloI	GAACNNNNNNTCC	2 cut(s)	623, 655
Alw21I	GWGCWC	1 cut(s)	1194
Alw26I	GTCTC	1 cut(s)	1048
AlwI	GGATC	1 cut(s)	1181
AoxI	GGCC	3 cut(s)	109, 357, 445
ApeKI	GCWGC	4 cut(s)	177, 719, 952, 1450
ApoI	RAATTY	2 cut(s)	490, 769
AsiGI	ACCGGT	1 cut(s)	1057
Asp700I	GAANNNNTTC	1 cut(s)	571
AspLEI	GCGC	3 cut(s)	9, 538, 540
AsuC2I	CCSGG	3 cut(s)	449, 830, 904
AsuHPI	GGTGA	7 cut(s)	91, 112, 159, 223, 446, 1166, 1168
AsuII	TTCGAA	1 cut(s)	621
AsuNHI	GCTAGC	1 cut(s)	1453
Bbv12I	GWGCWC	1 cut(s)	1194
BbvI	GCAGC	4 cut(s)	164, 706, 964, 1462
BccI	CCATC	4 cut(s)	74, 284, 736, 1549
BciT130I	CCWGG	1 cut(s)	542
BclI	TGATCA	4 cut(s)	246, 328, 604, 1347
BcnI	CCSGG	3 cut(s)	449, 830, 904
BcoDI	GTCTC	1 cut(s)	1048
BfaI	CTAG	1 cut(s)	1454
BfmI	CTRYAG	1 cut(s)	235
BfrI	CTTAAG	1 cut(s)	1472
BfuAI	ACCTGC	2 cut(s)	1138, 1305
BisI	GCNGC	5 cut(s)	178, 692, 720, 953, 1451
BlpI	GCTNAGC	1 cut(s)	1434
BlsI	GCNGC	5 cut(s)	179, 693, 721, 954, 1452
Bme1390I	CCNGG	4 cut(s)	449, 542, 830, 904
BmiI	GGNNCC	1 cut(s)	1467
BmrFI	CCNGG	4 cut(s)	449, 542, 830, 904
BmrI	ACTGGG	1 cut(s)	182
BmsI	GCATC	5 cut(s)	167, 385, 639, 745, 1468
BmtI	GCTAGC	1 cut(s)	1457
BmuI	ACTGGG	1 cut(s)	182
BoxI	GACNNNNGTC	1 cut(s)	39
Bpu1102I	GCTNAGC	1 cut(s)	1434
Bpu14I	TTCGAA	1 cut(s)	621
BpuEI	CTTGAG	2 cut(s)	338, 498
BpuMI	CCSGG	3 cut(s)	449, 830, 904
BsaBI	GATNNNNATC	1 cut(s)	290
BsaHI	GRCGYC	1 cut(s)	1231
BsaI	GGTCTC	1 cut(s)	1048
BsaJI	CCNNGG	4 cut(s)	216, 903, 1099, 1582
BsaWI	WCCGGW	2 cut(s)	642, 1057
BsaXI	ACNNNNNCTCC	1 cut(s)	31
Bsc4I	CCNNNNNNNGG	5 cut(s)	281, 282, 321, 1185, 1524
Bse118I	RCCGGY	2 cut(s)	1057, 1233
Bse1I	ACTGG	2 cut(s)	177, 638
Bse3DI	GCAATG	3 cut(s)	1083, 1194, 1445
Bse8I	GATNNNNATC	1 cut(s)	290
BseBI	CCWGG	1 cut(s)	542
BseDI	CCNNGG	4 cut(s)	216, 903, 1099, 1582
BseGI	GGATG	3 cut(s)	760, 1050, 1483
BseJI	GATNNNNATC	1 cut(s)	290
BseLI	CCNNNNNNNGG	5 cut(s)	281, 282, 321, 1185, 1524
BseMI	GCAATG	3 cut(s)	1083, 1194, 1445
BseMII	CTCAG	3 cut(s)	552, 668, 1425
BseNI	ACTGG	2 cut(s)	177, 638
BsePI	GCGCGC	1 cut(s)	536
BseRI	GAGGAG	3 cut(s)	9, 52, 125
BseXI	GCAGC	4 cut(s)	164, 706, 964, 1462
BseYI	CCCAGC	2 cut(s)	460, 518
Bsh1236I	CGCG	1 cut(s)	538
BshFI	GGCC	3 cut(s)	111, 359, 447
BshTI	ACCGGT	1 cut(s)	1057
BsiHKAI	GWGCWC	1 cut(s)	1194
BsiSI	CCGG	6 cut(s)	448, 643, 829, 903, 1058, 1234
BslFI	GGGAC	2 cut(s)	543, 991
BslI	CCNNNNNNNGG	5 cut(s)	281, 282, 321, 1185, 1524
BsmAI	GTCTC	1 cut(s)	1048
BsmFI	GGGAC	2 cut(s)	543, 991
BsmI	GAATGC	1 cut(s)	1078
BsnI	GGCC	3 cut(s)	111, 359, 447
Bso31I	GGTCTC	1 cut(s)	1048
Bsp119I	TTCGAA	1 cut(s)	621
Bsp1286I	GDGCHC	1 cut(s)	1194
Bsp1407I	TGTACA	1 cut(s)	484
Bsp143I	GATC	7 cut(s)	246, 306, 328, 604, 1173, 1303, 1347
Bsp1720I	GCTNAGC	1 cut(s)	1434
Bsp19I	CCATGG	2 cut(s)	216, 1099
BspACI	CCGC	5 cut(s)	213, 629, 691, 758, 1540
BspANI	GGCC	3 cut(s)	111, 359, 447
BspCNI	CTCAG	3 cut(s)	553, 667, 1426
BspFNI	CGCG	1 cut(s)	538
BspHI	TCATGA	3 cut(s)	372, 588, 931
BspLI	GGNNCC	1 cut(s)	1467
BspMI	ACCTGC	2 cut(s)	1138, 1305
BspOI	GCTAGC	1 cut(s)	1457
BspPI	GGATC	1 cut(s)	1181
BspT104I	TTCGAA	1 cut(s)	621
BspTI	CTTAAG	1 cut(s)	1472
BspTNI	GGTCTC	1 cut(s)	1048
BsrBI	CCGCTC	1 cut(s)	1540
BsrDI	GCAATG	3 cut(s)	1083, 1194, 1445
BsrFI	RCCGGY	2 cut(s)	1057, 1233
BsrGI	TGTACA	1 cut(s)	484
BsrI	ACTGG	2 cut(s)	177, 638
BssAI	RCCGGY	2 cut(s)	1057, 1233
BssECI	CCNNGG	4 cut(s)	216, 903, 1099, 1582
BssHII	GCGCGC	1 cut(s)	536
BssMI	GATC	7 cut(s)	246, 306, 328, 604, 1173, 1303, 1347
BssNI	GRCGYC	1 cut(s)	1231
BssT1I	CCWWGG	2 cut(s)	216, 1099
Bst2UI	CCWGG	1 cut(s)	542
Bst6I	CTCTTC	2 cut(s)	119, 732
BstACI	GRCGYC	1 cut(s)	1231
BstAFI	CTTAAG	1 cut(s)	1472
BstAUI	TGTACA	1 cut(s)	484
BstBI	TTCGAA	1 cut(s)	621
BstC8I	GCNNGC	2 cut(s)	538, 1455
BstDEI	CTNAG	5 cut(s)	561, 654, 1281, 1310, 1434
BstDSI	CCRYGG	2 cut(s)	216, 1099
BstF5I	GGATG	3 cut(s)	760, 1050, 1483
BstFNI	CGCG	1 cut(s)	538
BstHHI	GCGC	3 cut(s)	9, 538, 540
BstKTI	GATC	7 cut(s)	249, 309, 331, 607, 1176, 1306, 1350
BstMAI	GTCTC	1 cut(s)	1048
BstMBI	GATC	7 cut(s)	246, 306, 328, 604, 1173, 1303, 1347
BstMWI	GCNNNNNNNGC	1 cut(s)	356
BstNI	CCWGG	1 cut(s)	542
BstNSI	RCATGY	1 cut(s)	698
BstPAI	GACNNNNGTC	1 cut(s)	39
BstSCI	CCNGG	4 cut(s)	447, 540, 828, 902
BstSFI	CTRYAG	1 cut(s)	235
BstUI	CGCG	1 cut(s)	538
BstV1I	GCAGC	4 cut(s)	164, 706, 964, 1462
BsuRI	GGCC	3 cut(s)	111, 359, 447
BtgI	CCRYGG	2 cut(s)	216, 1099
BtsCI	GGATG	3 cut(s)	760, 1050, 1483
BtsI	GCAGTG	1 cut(s)	1105
BtsIMutI	CAGTG	2 cut(s)	170, 1105
BveI	ACCTGC	2 cut(s)	1138, 1305
Cac8I	GCNNGC	2 cut(s)	538, 1455
CciI	TCATGA	3 cut(s)	372, 588, 931
CfoI	GCGC	3 cut(s)	9, 538, 540
Cfr10I	RCCGGY	2 cut(s)	1057, 1233
CseI	GACGC	2 cut(s)	877, 1239
Csp6I	GTAC	4 cut(s)	485, 970, 1261, 1412
CspAI	ACCGGT	1 cut(s)	1057
CviQI	GTAC	4 cut(s)	485, 970, 1261, 1412
DdeI	CTNAG	5 cut(s)	561, 654, 1281, 1310, 1434
DpnI	GATC	7 cut(s)	248, 308, 330, 606, 1175, 1305, 1349
DpnII	GATC	7 cut(s)	246, 306, 328, 604, 1173, 1303, 1347
EaeI	YGGCCR	1 cut(s)	445
Eam1104I	CTCTTC	2 cut(s)	119, 732
EarI	CTCTTC	2 cut(s)	119, 732
EciI	GGCGGA	1 cut(s)	644
Eco130I	CCWWGG	2 cut(s)	216, 1099
Eco147I	AGGCCT	2 cut(s)	111, 359
Eco31I	GGTCTC	1 cut(s)	1048
Eco32I	GATATC	1 cut(s)	594
Eco57I	CTGAAG	2 cut(s)	867, 1573
EcoRI	GAATTC	2 cut(s)	490, 769
EcoRII	CCWGG	1 cut(s)	540
EcoRV	GATATC	1 cut(s)	594
EcoT14I	CCWWGG	2 cut(s)	216, 1099
ErhI	CCWWGG	2 cut(s)	216, 1099
FalI	AAGNNNNNCTT	2 cut(s)	855, 887
FaqI	GGGAC	2 cut(s)	543, 991
FauNDI	CATATG	1 cut(s)	601
FbaI	TGATCA	4 cut(s)	246, 328, 604, 1347
Fnu4HI	GCNGC	5 cut(s)	178, 692, 720, 953, 1451
FokI	GGATG	3 cut(s)	767, 1057, 1490
Fsp4HI	GCNGC	5 cut(s)	178, 692, 720, 953, 1451
FspBI	CTAG	1 cut(s)	1454
GlaI	GCGC	3 cut(s)	8, 537, 539
GluI	GCNGC	5 cut(s)	178, 692, 720, 953, 1451
GsaI	CCCAGC	2 cut(s)	464, 522
HaeIII	GGCC	3 cut(s)	111, 359, 447
HapII	CCGG	6 cut(s)	448, 643, 829, 903, 1058, 1234
HgaI	GACGC	2 cut(s)	877, 1239
HhaI	GCGC	3 cut(s)	9, 538, 540
Hin1I	GRCGYC	1 cut(s)	1231
Hin6I	GCGC	3 cut(s)	7, 536, 538
HinP1I	GCGC	3 cut(s)	7, 536, 538
HindIII	AAGCTT	2 cut(s)	90, 1116
HinfI	GANTC	9 cut(s)	286, 369, 439, 470, 623, 928, 935, 1168, 1252
HpaII	CCGG	6 cut(s)	448, 643, 829, 903, 1058, 1234
HphI	GGTGA	7 cut(s)	91, 112, 159, 223, 446, 1166, 1168
Hpy188I	TCNGA	9 cut(s)	34, 251, 475, 562, 609, 657, 1030, 1173, 1352
Hpy188III	TCNNGA	4 cut(s)	310, 373, 589, 932
Hpy99I	CGWCG	2 cut(s)	45, 580
HpyAV	CCTTC	7 cut(s)	47, 394, 421, 721, 959, 1220, 1371
HpyCH4IV	ACGT	3 cut(s)	680, 711, 1422
HpyCH4V	TGCA	7 cut(s)	599, 838, 1076, 1133, 1147, 1296, 1481
HpyF10VI	GCNNNNNNNGC	1 cut(s)	356
HpyF3I	CTNAG	5 cut(s)	561, 654, 1281, 1310, 1434
HpySE526I	ACGT	3 cut(s)	680, 711, 1422
Hsp92I	GRCGYC	1 cut(s)	1231
HspAI	GCGC	3 cut(s)	7, 536, 538
Ksp22I	TGATCA	4 cut(s)	246, 328, 604, 1347
Kzo9I	GATC	7 cut(s)	246, 306, 328, 604, 1173, 1303, 1347
LmnI	GCTCC	2 cut(s)	812, 820
Lsp1109I	GCAGC	4 cut(s)	164, 706, 964, 1462
LweI	GCATC	5 cut(s)	167, 385, 639, 745, 1468
MaeI	CTAG	1 cut(s)	1454
MaeII	ACGT	3 cut(s)	680, 711, 1422
MaeIII	GTNAC	5 cut(s)	310, 865, 1103, 1205, 1244
MalI	GATC	7 cut(s)	248, 308, 330, 606, 1175, 1305, 1349
MbiI	CCGCTC	1 cut(s)	1540
MboI	GATC	7 cut(s)	246, 306, 328, 604, 1173, 1303, 1347
MboII	GAAGA	9 cut(s)	41, 106, 109, 397, 670, 736, 749, 1235, 1298
MhlI	GDGCHC	1 cut(s)	1194
MluCI	AATT	5 cut(s)	343, 490, 769, 1427, 1460
MlyI	GAGTC	2 cut(s)	378, 944
MmeI	TCCRAC	1 cut(s)	891
MroXI	GAANNNNTTC	1 cut(s)	571
MseI	TTAA	1 cut(s)	1473
MslI	CAYNNNNRTG	1 cut(s)	308
MspCI	CTTAAG	1 cut(s)	1472
MspI	CCGG	6 cut(s)	448, 643, 829, 903, 1058, 1234
MspR9I	CCNGG	4 cut(s)	449, 542, 830, 904
Mva1269I	GAATGC	1 cut(s)	1078
MvaI	CCWGG	1 cut(s)	542
MvnI	CGCG	1 cut(s)	538
MwoI	GCNNNNNNNGC	1 cut(s)	356
NciI	CCSGG	3 cut(s)	449, 830, 904
NcoI	CCATGG	2 cut(s)	216, 1099
NdeI	CATATG	1 cut(s)	601
NdeII	GATC	7 cut(s)	246, 306, 328, 604, 1173, 1303, 1347
NheI	GCTAGC	1 cut(s)	1453
NlaIV	GGNNCC	1 cut(s)	1467
NmeAIII	GCCGAG	2 cut(s)	1543, 1563
NmuCI	GTSAC	4 cut(s)	310, 865, 1103, 1205
NspI	RCATGY	1 cut(s)	698
NspV	TTCGAA	1 cut(s)	621
PagI	TCATGA	3 cut(s)	372, 588, 931
PaqCI	CACCTGC	1 cut(s)	1305
PauI	GCGCGC	1 cut(s)	536
PceI	AGGCCT	2 cut(s)	111, 359
PcsI	WCGNNNNNNNCGW	2 cut(s)	770, 1515
PctI	GAATGC	1 cut(s)	1078
PdmI	GAANNNNTTC	1 cut(s)	571
PfeI	GAWTC	7 cut(s)	286, 439, 470, 623, 928, 1168, 1252
PfoI	TCCNGGA	1 cut(s)	828
PinAI	ACCGGT	1 cut(s)	1057
PkrI	GCNGC	5 cut(s)	179, 693, 721, 954, 1452
PleI	GAGTC	2 cut(s)	377, 943
PpsI	GAGTC	2 cut(s)	377, 943
PshAI	GACNNNNGTC	1 cut(s)	39
Psp1406I	AACGTT	2 cut(s)	711, 1422
Psp6I	CCWGG	1 cut(s)	540
PspFI	CCCAGC	2 cut(s)	460, 518
PspGI	CCWGG	1 cut(s)	540
PspN4I	GGNNCC	1 cut(s)	1467
PteI	GCGCGC	1 cut(s)	536
RsaI	GTAC	4 cut(s)	486, 971, 1262, 1413
RsaNI	GTAC	4 cut(s)	485, 970, 1261, 1412
RseI	CAYNNNNRTG	1 cut(s)	308
SaqAI	TTAA	1 cut(s)	1473
SatI	GCNGC	5 cut(s)	178, 692, 720, 953, 1451
Sau3AI	GATC	7 cut(s)	246, 306, 328, 604, 1173, 1303, 1347
SchI	GAGTC	2 cut(s)	378, 944
ScrFI	CCNGG	4 cut(s)	449, 542, 830, 904
SduI	GDGCHC	1 cut(s)	1194
SfaNI	GCATC	5 cut(s)	167, 385, 639, 745, 1468
SfcI	CTRYAG	1 cut(s)	235
SfuI	TTCGAA	1 cut(s)	621
SmiMI	CAYNNNNRTG	1 cut(s)	308
SmlI	CTYRAG	3 cut(s)	353, 513, 1472
SmoI	CTYRAG	3 cut(s)	353, 513, 1472
Sse9I	AATT	5 cut(s)	343, 490, 769, 1427, 1460
SseBI	AGGCCT	2 cut(s)	111, 359
SsiI	CCGC	5 cut(s)	213, 629, 691, 758, 1540
SspMI	CTAG	1 cut(s)	1454
StuI	AGGCCT	2 cut(s)	111, 359
StyD4I	CCNGG	4 cut(s)	447, 540, 828, 902
StyI	CCWWGG	2 cut(s)	216, 1099
TaiI	ACGT	3 cut(s)	683, 714, 1425
TaqI	TCGA	5 cut(s)	78, 549, 621, 773, 1536
TasI	AATT	5 cut(s)	343, 490, 769, 1427, 1460
TatI	WGTACW	2 cut(s)	484, 1260
TauI	GCSGC	1 cut(s)	694
TfiI	GAWTC	7 cut(s)	286, 439, 470, 623, 928, 1168, 1252
Tru1I	TTAA	1 cut(s)	1473
Tru9I	TTAA	1 cut(s)	1473
TscAI	CASTG	2 cut(s)	177, 1112
TseFI	GTSAC	4 cut(s)	310, 865, 1103, 1205
TseI	GCWGC	4 cut(s)	177, 719, 952, 1450
Tsp45I	GTSAC	4 cut(s)	310, 865, 1103, 1205
TspDTI	ATGAA	9 cut(s)	17, 278, 389, 398, 431, 567, 920, 1061, 1347
TspGWI	ACGGA	2 cut(s)	629, 875
TspRI	CASTG	2 cut(s)	177, 1112
Vha464I	CTTAAG	1 cut(s)	1472
XapI	RAATTY	2 cut(s)	490, 769
XceI	RCATGY	1 cut(s)	698
XmnI	GAANNNNTTC	1 cut(s)	571
XspI	CTAG	1 cut(s)	1454

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.