MD13G1002800.v1.1

Mur ligase family, glutamate ligase domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr13
OG0018433
Physical Location & Seq
Forward (+)
171727 .. 173804
2078 bp
Loading structure...
UTR
Exon/CDS
Intron
MD13G1002800.v1.1.491

Sequence Viewer

Length: 1530 bp
ATGTCTGCAACACCAACACCACATTCCTCCTGGCACCTACTCTCAATCATAAAACCCAGCAGGCACTCTATCTCTATCGCCACCAAATTTTCCATAAACCCTAGTTCCCCAAATCCCCCGGAATCGGAATCAAAAACCCTGTGGACCGTCTCTGATATCGCTGCCGCTGTCAACGGGAGGATCGTAAAATGGGGTCCTCCTGGAACCATATCTACAGACACCAGAACCCTGCAACCTAACCAGTGGTTCTTCGCCATTGCCGGCCCAAACTTCGATGCCCACGATTTCGTCACCCCGGAGTTGTCCCGCAGAGGCTGTGCCGGAGTTATCGGCAACCGCGTCTGCGAGAATTGGGACAGAGGCTTTGTTGAATGCCACGGTAACACTGTCGTTTCGTTGAAGAAGATGGCTAGTTATGCAAGGAACAGGTTTCACGGTGAAGTGGTGGGAGTGACTGGGAGCGTGGGAAAGACTAGCACAAAGTCCATGATAGCTTTGGCTCTTGAGAGTTCAACATGTTTGGTTCATCAAAGTCATGGGAATTGGAACAATGAAATTGGGGTTGCTCTGTCGTTGATTGGGATGCCGAGGAATTCTGGGGTTGTGGTTTTGGAGATGGGAATGAGCGGGAAGGGGGAGATTTTAGAGCTTGCGAGGACGGCTAGGCCGACCGTAAGGCTCATTCTAAATGTGGGGGCTTCGCATTTTTGCAACTTTTCGAGTTTGGAGGAAATTGCAATTGCCAAAGGGGAAATTTTGGCGGAAGCAAAGCCCGGGGACGTCTGTGTTTTGAATGCTGACGATCCACTTGTCATGAGCCTCCCCGTGCCATATGGTGTCAAAAAGGTGCTGTTTGGTCGGAGACGGACAGTGGGGTGCCATGTTCGGTTGGTTGTATCAGAAAGCACAAACAGGGGTCTTGGAGTTAGAGTTGTCTTACAGAATCACCAAGAGATGGTAGAGTTTGTGATACCTAGTCCAGGCGTCCATTTGGGTGTCAATGCATGTGCGGCAGCAGCAGTAGCGACTCTTTTAGGAGTATCTCTTTCTCAAATTGGAGTTCGCCTGTCAGCCTTTTCTCCGGTTCACATGAGGTTGGAGCTTGAAATTGCTAGAAATGGAACCAAGATAGTGAATGATGCTTACAATGCAAACCCTGTGAGCACCAAGGCTGCCATTGACGTGCTTGAGAGTATTGATTGCAGAGGCAAAAGAATCGCCATACTCGGAGACATGTTAGAACTTGGTGGAATTGAGATGGAGTCACACGAGATGATTTTAAAGCAGTGTCGTAGTGCTCGTATTGATTTAGTTGGCCTCGTGGGGGAGAGGTTTTGTGCAGCAGCTGCGAGTATGAAGTCGCTTGACGAGATGAACATCTTATATGCTATTGACTCGGAAATTTTAGCGCAGGAAATTGTGAAGATGGTTAATTGTAATGATGTTGTGTTGGTGAAGGGTAGTCGGGGATTGCAAATGGAAAAAGTTGTGAATGCAATTAAATTAATGGAATCAAACAACCCTATTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Mur_ligase_C Mur_ligase_M

Protein Analysis

510

Amino Acids

54.75

Weight (kDa)

8.22

Isoelectric Point (pI)

40.6

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Mur_ligase_M PF08245 151 - 342 2.1e-30 Mur ligase middle domain
Mur_ligase_C PF02875 365 - 489 4.6e-15 Mur ligase, glutamate ligase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0018433)

Species Orthologous Gene IDs
fragaria_vesca FvH4_4g37200
malus_domestica MD13G1002800.v1.1
prunus_persica Prupe.1G349600_v2.0.a1
rosa_laevigata RLG00000005615
rosa_rugosa Rorug04G0376600
rosa_samantha Rh4AG438200 Rh4BG447200 Rh4CG464400 Rh4DG445900
rosa_wichuraiana Rw4G037480

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 783
AccB1I GGYRCC 2 cut(s) 33, 876
AccB7I CCANNNNNTGG 1 cut(s) 955
AccBSI CCGCTC 1 cut(s) 627
AccII CGCG 1 cut(s) 339
AciI CCGC 6 cut(s) 165, 307, 337, 627, 761, 1010
AclWI GGATC 2 cut(s) 188, 797
AcsI RAATTY 4 cut(s) 86, 592, 753, 1401
AcyI GRCGYC 2 cut(s) 780, 984
AfiI CCNNNNNNNGG 4 cut(s) 124, 955, 980, 1324
AflIII ACRYGT 2 cut(s) 515, 1233
AgsI TTSAA 5 cut(s) 371, 400, 513, 793, 1106
AjiI CACGTC 1 cut(s) 1183
AjnI CCWGG 3 cut(s) 29, 199, 979
AjuI GAANNNNNNNTTGG 2 cut(s) 7, 39
AluBI AGCT 4 cut(s) 494, 649, 1102, 1346
AluI AGCT 4 cut(s) 494, 649, 1102, 1346
Alw21I GWGCWC 2 cut(s) 1166, 1300
Alw26I GTCTC 3 cut(s) 154, 856, 1224
AlwI GGATC 2 cut(s) 188, 797
AlwNI CAGNNNCTG 2 cut(s) 315, 1346
Ama87I CYCGRG 1 cut(s) 773
AoxI GGCC 3 cut(s) 262, 665, 1315
ApeKI GCWGC 7 cut(s) 161, 1013, 1016, 1172, 1340, 1343, 1346
ApoI RAATTY 4 cut(s) 86, 592, 753, 1401
ArsI GACNNNNNNTTYG 2 cut(s) 347, 379
AseI ATTAAT 1 cut(s) 1505
AspLEI GCGC 1 cut(s) 1411
AspS9I GGNCC 3 cut(s) 144, 194, 263
AsuC2I CCSGG 4 cut(s) 119, 296, 774, 775
AsuHPI GGTGA 4 cut(s) 283, 449, 938, 1465
AvaI CYCGRG 1 cut(s) 773
AvaII GGWCC 2 cut(s) 144, 194
BanI GGYRCC 2 cut(s) 33, 876
BauI CACGAG 2 cut(s) 1268, 1319
Bbv12I GWGCWC 2 cut(s) 1166, 1300
BbvI GCAGC 7 cut(s) 148, 1025, 1028, 1159, 1333, 1352, 1355
BccI CCATC 5 cut(s) 400, 610, 949, 1252, 1420
BceAI ACGGC 1 cut(s) 675
BcgI CGANNNNNNTGC 2 cut(s) 1198, 1232
BciT130I CCWGG 3 cut(s) 31, 201, 981
BcnI CCSGG 4 cut(s) 119, 296, 774, 775
BcoDI GTCTC 3 cut(s) 154, 856, 1224
BfaI CTAG 6 cut(s) 102, 411, 474, 663, 975, 1113
BfmI CTRYAG 1 cut(s) 213
BisI GCNGC 9 cut(s) 162, 165, 1011, 1014, 1017, 1173, 1341, 1344, 1347
BlsI GCNGC 9 cut(s) 163, 166, 1012, 1015, 1018, 1174, 1342, 1345, 1348
Bme1390I CCNGG 7 cut(s) 31, 119, 201, 296, 774, 775, 981
Bme18I GGWCC 2 cut(s) 144, 194
BmeT110I CYCGRG 1 cut(s) 773
BmgBI CACGTC 1 cut(s) 1183
BmgT120I GGNCC 3 cut(s) 144, 194, 263
BmiI GGNNCC 5 cut(s) 35, 195, 205, 878, 1123
BmrFI CCNGG 7 cut(s) 31, 119, 201, 296, 774, 775, 981
BmrI ACTGGG 1 cut(s) 465
BmsI GCATC 3 cut(s) 265, 573, 1129
BmuI ACTGGG 1 cut(s) 465
BpuEI CTTGAG 2 cut(s) 524, 1208
BpuMI CCSGG 4 cut(s) 119, 296, 774, 775
BsaBI GATNNNNATC 1 cut(s) 1376
BsaHI GRCGYC 2 cut(s) 780, 984
BsaJI CCNNGG 7 cut(s) 117, 294, 376, 587, 773, 774, 1167
BsaWI WCCGGW 1 cut(s) 1081
BsaXI ACNNNNNCTCC 2 cut(s) 915, 945
Bsc4I CCNNNNNNNGG 4 cut(s) 124, 955, 980, 1324
Bse118I RCCGGY 1 cut(s) 260
Bse1I ACTGG 2 cut(s) 241, 460
Bse3DI GCAATG 1 cut(s) 255
Bse8I GATNNNNATC 1 cut(s) 1376
BseBI CCWGG 3 cut(s) 31, 201, 981
BseDI CCNNGG 7 cut(s) 117, 294, 376, 587, 773, 774, 1167
BseGI GGATG 1 cut(s) 588
BseJI GATNNNNATC 1 cut(s) 1376
BseLI CCNNNNNNNGG 4 cut(s) 124, 955, 980, 1324
BseMI GCAATG 1 cut(s) 255
BseNI ACTGG 2 cut(s) 241, 460
BseXI GCAGC 7 cut(s) 148, 1025, 1028, 1159, 1333, 1352, 1355
BseYI CCCAGC 1 cut(s) 56
BsgI GTGCAG 1 cut(s) 1359
Bsh1236I CGCG 1 cut(s) 339
Bsh1285I CGRYCG 1 cut(s) 672
BshFI GGCC 3 cut(s) 264, 667, 1317
BshNI GGYRCC 2 cut(s) 33, 876
BsiEI CGRYCG 1 cut(s) 672
BsiHKAI GWGCWC 2 cut(s) 1166, 1300
BsiHKCI CYCGRG 1 cut(s) 773
BsiSI CCGG 6 cut(s) 119, 261, 296, 321, 774, 1082
BslFI GGGAC 3 cut(s) 289, 368, 791
BslI CCNNNNNNNGG 4 cut(s) 124, 955, 980, 1324
BsmAI GTCTC 3 cut(s) 154, 856, 1224
BsmBI CGTCTC 2 cut(s) 154, 856
BsmFI GGGAC 3 cut(s) 289, 368, 791
BsmI GAATGC 3 cut(s) 377, 799, 1498
BsnI GGCC 3 cut(s) 264, 667, 1317
BsoBI CYCGRG 1 cut(s) 773
Bsp1286I GDGCHC 2 cut(s) 1166, 1300
Bsp143I GATC 2 cut(s) 180, 802
BspACI CCGC 6 cut(s) 165, 307, 337, 627, 761, 1010
BspANI GGCC 3 cut(s) 264, 667, 1317
BspFNI CGCG 1 cut(s) 339
BspHI TCATGA 1 cut(s) 813
BspLI GGNNCC 5 cut(s) 35, 195, 205, 878, 1123
BspPI GGATC 2 cut(s) 188, 797
BspT107I GGYRCC 2 cut(s) 33, 876
BsrBI CCGCTC 1 cut(s) 627
BsrDI GCAATG 1 cut(s) 255
BsrFI RCCGGY 1 cut(s) 260
BsrI ACTGG 2 cut(s) 241, 460
BssAI RCCGGY 1 cut(s) 260
BssECI CCNNGG 7 cut(s) 117, 294, 376, 587, 773, 774, 1167
BssMI GATC 2 cut(s) 180, 802
BssNI GRCGYC 2 cut(s) 780, 984
BssSI CACGAG 2 cut(s) 1268, 1319
BssT1I CCWWGG 1 cut(s) 1167
Bst2BI CACGAG 2 cut(s) 1268, 1319
Bst2UI CCWGG 3 cut(s) 31, 201, 981
Bst4CI ACNGT 6 cut(s) 148, 380, 388, 437, 673, 871
BstACI GRCGYC 2 cut(s) 780, 984
BstAPI GCANNNNNTGC 1 cut(s) 1346
BstC8I GCNNGC 3 cut(s) 62, 262, 651
BstDSI CCRYGG 1 cut(s) 376
BstENI CCTNNNNNAGG 1 cut(s) 978
BstF5I GGATG 1 cut(s) 588
BstFNI CGCG 1 cut(s) 339
BstHHI GCGC 1 cut(s) 1411
BstKTI GATC 2 cut(s) 183, 805
BstMAI GTCTC 3 cut(s) 154, 856, 1224
BstMBI GATC 2 cut(s) 180, 802
BstMCI CGRYCG 1 cut(s) 672
BstMWI GCNNNNNNNGC 7 cut(s) 416, 659, 1010, 1016, 1022, 1148, 1346
BstNI CCWGG 3 cut(s) 31, 201, 981
BstNSI RCATGY 3 cut(s) 519, 1008, 1237
BstSCI CCNGG 7 cut(s) 29, 117, 199, 294, 772, 773, 979
BstSFI CTRYAG 1 cut(s) 213
BstUI CGCG 1 cut(s) 339
BstV1I GCAGC 7 cut(s) 148, 1025, 1028, 1159, 1333, 1352, 1355
BsuRI GGCC 3 cut(s) 264, 667, 1317
BtgI CCRYGG 1 cut(s) 376
BtrI CACGTC 1 cut(s) 1183
BtsCI GGATG 1 cut(s) 588
BtsI GCAGTG 1 cut(s) 1292
BtsIMutI CAGTG 4 cut(s) 248, 384, 876, 1292
Cac8I GCNNGC 3 cut(s) 62, 262, 651
CaiI CAGNNNCTG 2 cut(s) 315, 1346
CciI TCATGA 1 cut(s) 813
CfoI GCGC 1 cut(s) 1411
Cfr10I RCCGGY 1 cut(s) 260
Cfr13I GGNCC 3 cut(s) 144, 194, 263
Cfr9I CCCGGG 1 cut(s) 773
CseI GACGC 2 cut(s) 328, 973
CviAII CATG 8 cut(s) 487, 516, 536, 814, 881, 1005, 1090, 1234
DpnI GATC 2 cut(s) 182, 804
DpnII GATC 2 cut(s) 180, 802
DraI TTTAAA 1 cut(s) 1281
EciI GGCGGA 1 cut(s) 776
Eco130I CCWWGG 1 cut(s) 1167
Eco32I GATATC 1 cut(s) 157
Eco47I GGWCC 2 cut(s) 144, 194
Eco88I CYCGRG 1 cut(s) 773
EcoNI CCTNNNNNAGG 1 cut(s) 978
EcoO109I RGGNCCY 1 cut(s) 194
EcoRI GAATTC 1 cut(s) 592
EcoRII CCWGG 3 cut(s) 29, 199, 979
EcoRV GATATC 1 cut(s) 157
EcoT14I CCWWGG 1 cut(s) 1167
EcoT22I ATGCAT 1 cut(s) 1006
ErhI CCWWGG 1 cut(s) 1167
Esp3I CGTCTC 2 cut(s) 154, 856
FaeI CATG 8 cut(s) 490, 519, 539, 817, 884, 1008, 1093, 1237
FaqI GGGAC 3 cut(s) 289, 368, 791
FatI CATG 8 cut(s) 486, 515, 535, 813, 880, 1004, 1089, 1233
FauI CCCGC 2 cut(s) 314, 620
FauNDI CATATG 1 cut(s) 832
Fnu4HI GCNGC 9 cut(s) 162, 165, 1011, 1014, 1017, 1173, 1341, 1344, 1347
FokI GGATG 1 cut(s) 595
Fsp4HI GCNGC 9 cut(s) 162, 165, 1011, 1014, 1017, 1173, 1341, 1344, 1347
FspBI CTAG 6 cut(s) 102, 411, 474, 663, 975, 1113
GlaI GCGC 1 cut(s) 1410
GluI GCNGC 9 cut(s) 162, 165, 1011, 1014, 1017, 1173, 1341, 1344, 1347
GsaI CCCAGC 1 cut(s) 60
HaeIII GGCC 3 cut(s) 264, 667, 1317
HapII CCGG 6 cut(s) 119, 261, 296, 321, 774, 1082
HgaI GACGC 2 cut(s) 328, 973
HhaI GCGC 1 cut(s) 1411
Hin1I GRCGYC 2 cut(s) 780, 984
Hin1II CATG 8 cut(s) 490, 519, 539, 817, 884, 1008, 1093, 1237
Hin6I GCGC 1 cut(s) 1409
HinP1I GCGC 1 cut(s) 1409
HincII GTYRAC 1 cut(s) 172
HindII GTYRAC 1 cut(s) 172
HinfI GANTC 8 cut(s) 122, 128, 943, 1027, 1215, 1262, 1394, 1511
HpaII CCGG 6 cut(s) 119, 261, 296, 321, 774, 1082
HphI GGTGA 4 cut(s) 283, 449, 938, 1465
Hpy166II GTNNAC 3 cut(s) 144, 172, 1087
Hpy188I TCNGA 6 cut(s) 127, 154, 861, 901, 1229, 1399
Hpy188III TCNNGA 2 cut(s) 503, 814
Hpy8I GTNNAC 3 cut(s) 144, 172, 1087
HpyAV CCTTC 2 cut(s) 625, 1450
HpyCH4III ACNGT 6 cut(s) 148, 380, 388, 437, 673, 871
HpyCH4IV ACGT 2 cut(s) 780, 1182
HpyF10VI GCNNNNNNNGC 7 cut(s) 416, 659, 1010, 1016, 1022, 1148, 1346
HpySE526I ACGT 2 cut(s) 780, 1182
Hsp92I GRCGYC 2 cut(s) 780, 984
Hsp92II CATG 8 cut(s) 490, 519, 539, 817, 884, 1008, 1093, 1237
HspAI GCGC 1 cut(s) 1409
KroI GCCGGC 1 cut(s) 260
KroNI GCCGGC 1 cut(s) 262
Kzo9I GATC 2 cut(s) 180, 802
LmnI GCTCC 2 cut(s) 459, 1099
Lsp1109I GCAGC 7 cut(s) 148, 1025, 1028, 1159, 1333, 1352, 1355
LweI GCATC 3 cut(s) 265, 573, 1129
MaeI CTAG 6 cut(s) 102, 411, 474, 663, 975, 1113
MaeII ACGT 2 cut(s) 780, 1182
MaeIII GTNAC 4 cut(s) 289, 380, 451, 1263
MalI GATC 2 cut(s) 182, 804
MbiI CCGCTC 1 cut(s) 627
MboI GATC 2 cut(s) 180, 802
MboII GAAGA 4 cut(s) 241, 412, 415, 1435
MfeI CAATTG 1 cut(s) 738
MhlI GDGCHC 2 cut(s) 1166, 1300
MlyI GAGTC 3 cut(s) 1021, 1271, 1388
MmeI TCCRAC 2 cut(s) 839, 1077
Mph1103I ATGCAT 1 cut(s) 1006
MroNI GCCGGC 1 cut(s) 260
MseI TTAA 5 cut(s) 1280, 1431, 1500, 1505, 1528
MslI CAYNNNNRTG 2 cut(s) 993, 1181
MspA1I CMGCKG 2 cut(s) 167, 1346
MspI CCGG 6 cut(s) 119, 261, 296, 321, 774, 1082
MspR9I CCNGG 7 cut(s) 31, 119, 201, 296, 774, 775, 981
MunI CAATTG 1 cut(s) 738
Mva1269I GAATGC 3 cut(s) 377, 799, 1498
MvaI CCWGG 3 cut(s) 31, 201, 981
MvnI CGCG 1 cut(s) 339
MwoI GCNNNNNNNGC 7 cut(s) 416, 659, 1010, 1016, 1022, 1148, 1346
NaeI GCCGGC 1 cut(s) 262
NciI CCSGG 4 cut(s) 119, 296, 774, 775
NdeI CATATG 1 cut(s) 832
NdeII GATC 2 cut(s) 180, 802
NgoMIV GCCGGC 1 cut(s) 260
NlaIII CATG 8 cut(s) 490, 519, 539, 817, 884, 1008, 1093, 1237
NlaIV GGNNCC 5 cut(s) 35, 195, 205, 878, 1123
NmeAIII GCCGAG 1 cut(s) 612
NmuCI GTSAC 3 cut(s) 289, 451, 1263
NsiI ATGCAT 1 cut(s) 1006
NspI RCATGY 3 cut(s) 519, 1008, 1237
PagI TCATGA 1 cut(s) 813
PciI ACATGT 2 cut(s) 515, 1233
PcsI WCGNNNNNNNCGW 5 cut(s) 180, 279, 336, 665, 1297
PctI GAATGC 3 cut(s) 377, 799, 1498
PdiI GCCGGC 1 cut(s) 262
PfeI GAWTC 5 cut(s) 122, 128, 943, 1215, 1511
PflMI CCANNNNNTGG 1 cut(s) 955
PfoI TCCNGGA 1 cut(s) 199
PkrI GCNGC 9 cut(s) 163, 166, 1012, 1015, 1018, 1174, 1342, 1345, 1348
PleI GAGTC 3 cut(s) 1021, 1270, 1388
PpsI GAGTC 3 cut(s) 1021, 1270, 1388
PpuMI RGGWCCY 1 cut(s) 194
PscI ACATGT 2 cut(s) 515, 1233
PshBI ATTAAT 1 cut(s) 1505
Psp5II RGGWCCY 1 cut(s) 194
Psp6I CCWGG 3 cut(s) 29, 199, 979
PspFI CCCAGC 1 cut(s) 56
PspGI CCWGG 3 cut(s) 29, 199, 979
PspN4I GGNNCC 5 cut(s) 35, 195, 205, 878, 1123
PspPI GGNCC 3 cut(s) 144, 194, 263
PspPPI RGGWCCY 1 cut(s) 194
PsrI GAACNNNNNNTAC 2 cut(s) 196, 228
PstNI CAGNNNCTG 2 cut(s) 315, 1346
PvuII CAGCTG 1 cut(s) 1346
RseI CAYNNNNRTG 2 cut(s) 993, 1181
SaqAI TTAA 5 cut(s) 1280, 1431, 1500, 1505, 1528
SatI GCNGC 9 cut(s) 162, 165, 1011, 1014, 1017, 1173, 1341, 1344, 1347
Sau3AI GATC 2 cut(s) 180, 802
Sau96I GGNCC 3 cut(s) 144, 194, 263
SchI GAGTC 3 cut(s) 1021, 1271, 1388
ScrFI CCNGG 7 cut(s) 31, 119, 201, 296, 774, 775, 981
SduI GDGCHC 2 cut(s) 1166, 1300
SfaNI GCATC 3 cut(s) 265, 573, 1129
SfcI CTRYAG 1 cut(s) 213
SinI GGWCC 2 cut(s) 144, 194
SmaI CCCGGG 1 cut(s) 775
SmiMI CAYNNNNRTG 2 cut(s) 993, 1181
SmlI CTYRAG 2 cut(s) 503, 1187
SmoI CTYRAG 2 cut(s) 503, 1187
SsiI CCGC 6 cut(s) 165, 307, 337, 627, 761, 1010
SspMI CTAG 6 cut(s) 102, 411, 474, 663, 975, 1113
StyD4I CCNGG 7 cut(s) 29, 117, 199, 294, 772, 773, 979
StyI CCWWGG 1 cut(s) 1167
TaaI ACNGT 6 cut(s) 148, 380, 388, 437, 673, 871
TaiI ACGT 2 cut(s) 783, 1185
TaqI TCGA 2 cut(s) 273, 719
TauI GCSGC 2 cut(s) 167, 1013
TfiI GAWTC 5 cut(s) 122, 128, 943, 1215, 1511
Tru1I TTAA 5 cut(s) 1280, 1431, 1500, 1505, 1528
Tru9I TTAA 5 cut(s) 1280, 1431, 1500, 1505, 1528
TscAI CASTG 4 cut(s) 248, 391, 876, 1292
TseFI GTSAC 3 cut(s) 289, 451, 1263
TseI GCWGC 7 cut(s) 161, 1013, 1016, 1172, 1340, 1343, 1346
Tsp45I GTSAC 3 cut(s) 289, 451, 1263
TspDTI ATGAA 4 cut(s) 515, 567, 1370, 1388
TspGWI ACGGA 1 cut(s) 880
TspMI CCCGGG 1 cut(s) 773
TspRI CASTG 4 cut(s) 248, 391, 876, 1292
Van91I CCANNNNNTGG 1 cut(s) 955
VpaK11BI GGWCC 2 cut(s) 144, 194
VspI ATTAAT 1 cut(s) 1505
XagI CCTNNNNNAGG 1 cut(s) 978
XapI RAATTY 4 cut(s) 86, 592, 753, 1401
XceI RCATGY 3 cut(s) 519, 1008, 1237
XcmI CCANNNNNNNNNTGG 2 cut(s) 27, 493
XmaI CCCGGG 1 cut(s) 773
XspI CTAG 6 cut(s) 102, 411, 474, 663, 975, 1113
ZraI GACGTC 1 cut(s) 781
Zsp2I ATGCAT 1 cut(s) 1006
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.