Mur ligase family, glutamate ligase domain
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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_4g37200 |
| malus_domestica | MD13G1002800.v1.1 |
| prunus_persica | Prupe.1G349600_v2.0.a1 |
| rosa_laevigata | RLG00000005615 |
| rosa_rugosa | Rorug04G0376600 |
| rosa_samantha | Rh4AG438200 Rh4BG447200 Rh4CG464400 Rh4DG445900 |
| rosa_wichuraiana | Rw4G037480 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 171 |
| AclWI | GGATC | 1 cut(s) | 59 |
| AcoI | YGGCCR | 1 cut(s) | 3 |
| AcsI | RAATTY | 2 cut(s) | 117, 214 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 135 |
| AgsI | TTSAA | 1 cut(s) | 107 |
| AjnI | CCWGG | 1 cut(s) | 21 |
| AluBI | AGCT | 2 cut(s) | 34, 257 |
| AluI | AGCT | 2 cut(s) | 34, 257 |
| AlwI | GGATC | 1 cut(s) | 59 |
| AoxI | GGCC | 1 cut(s) | 3 |
| ApeKI | GCWGC | 3 cut(s) | 59, 165, 168 |
| ApoI | RAATTY | 2 cut(s) | 117, 214 |
| BalI | TGGCCA | 1 cut(s) | 5 |
| BbvI | GCAGC | 3 cut(s) | 46, 177, 180 |
| BciT130I | CCWGG | 1 cut(s) | 23 |
| BisI | GCNGC | 4 cut(s) | 60, 166, 169, 172 |
| BlsI | GCNGC | 4 cut(s) | 61, 167, 170, 173 |
| Bme1390I | CCNGG | 1 cut(s) | 23 |
| BmrFI | CCNGG | 1 cut(s) | 23 |
| BmrI | ACTGGG | 1 cut(s) | 124 |
| BmuI | ACTGGG | 1 cut(s) | 124 |
| BpmI | CTGGAG | 1 cut(s) | 5 |
| BpuEI | CTTGAG | 1 cut(s) | 190 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 135 |
| Bse1I | ACTGG | 1 cut(s) | 130 |
| BseBI | CCWGG | 1 cut(s) | 23 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 135 |
| BseNI | ACTGG | 1 cut(s) | 130 |
| BseRI | GAGGAG | 1 cut(s) | 74 |
| BseXI | GCAGC | 3 cut(s) | 46, 177, 180 |
| BsgI | GTGCAG | 1 cut(s) | 184 |
| BshFI | GGCC | 1 cut(s) | 5 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 135 |
| BsnI | GGCC | 1 cut(s) | 5 |
| Bsp143I | GATC | 1 cut(s) | 64 |
| BspACI | CCGC | 1 cut(s) | 171 |
| BspANI | GGCC | 1 cut(s) | 5 |
| BspPI | GGATC | 1 cut(s) | 59 |
| BsrI | ACTGG | 1 cut(s) | 130 |
| BssMI | GATC | 1 cut(s) | 64 |
| Bst2UI | CCWGG | 1 cut(s) | 23 |
| BstKTI | GATC | 1 cut(s) | 67 |
| BstMBI | GATC | 1 cut(s) | 64 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 156, 165, 171, 177 |
| BstNI | CCWGG | 1 cut(s) | 23 |
| BstSCI | CCNGG | 1 cut(s) | 21 |
| BstV1I | GCAGC | 3 cut(s) | 46, 177, 180 |
| BsuRI | GGCC | 1 cut(s) | 5 |
| CviAII | CATG | 1 cut(s) | 56 |
| CviJI | RGCY | 5 cut(s) | 5, 34, 81, 150, 257 |
| CviKI_1 | RGCY | 5 cut(s) | 5, 34, 81, 150, 257 |
| DpnI | GATC | 1 cut(s) | 66 |
| DpnII | GATC | 1 cut(s) | 64 |
| EaeI | YGGCCR | 1 cut(s) | 3 |
| EcoRII | CCWGG | 1 cut(s) | 21 |
| FaeI | CATG | 1 cut(s) | 59 |
| FaiI | YATR | 2 cut(s) | 57, 77 |
| FatI | CATG | 1 cut(s) | 55 |
| Fnu4HI | GCNGC | 4 cut(s) | 60, 166, 169, 172 |
| Fsp4HI | GCNGC | 4 cut(s) | 60, 166, 169, 172 |
| GluI | GCNGC | 4 cut(s) | 60, 166, 169, 172 |
| GsuI | CTGGAG | 1 cut(s) | 5 |
| HaeIII | GGCC | 1 cut(s) | 5 |
| Hin1II | CATG | 1 cut(s) | 59 |
| HindIII | AAGCTT | 1 cut(s) | 32 |
| HinfI | GANTC | 1 cut(s) | 16 |
| Hpy188I | TCNGA | 1 cut(s) | 254 |
| HpyCH4V | TGCA | 3 cut(s) | 143, 165, 180 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 156, 165, 171, 177 |
| Hsp92II | CATG | 1 cut(s) | 59 |
| Kzo9I | GATC | 1 cut(s) | 64 |
| LpnPI | CCDG | 3 cut(s) | 8, 35, 143 |
| Lsp1109I | GCAGC | 3 cut(s) | 46, 177, 180 |
| MalI | GATC | 1 cut(s) | 66 |
| MboI | GATC | 1 cut(s) | 64 |
| MlsI | TGGCCA | 1 cut(s) | 5 |
| MluCI | AATT | 2 cut(s) | 117, 214 |
| MluNI | TGGCCA | 1 cut(s) | 5 |
| MmeI | TCCRAC | 1 cut(s) | 191 |
| MnlI | CCTC | 6 cut(s) | 19, 92, 95, 99, 129, 241 |
| Mox20I | TGGCCA | 1 cut(s) | 5 |
| MscI | TGGCCA | 1 cut(s) | 5 |
| Msp20I | TGGCCA | 1 cut(s) | 5 |
| MspA1I | CMGCKG | 1 cut(s) | 171 |
| MspR9I | CCNGG | 1 cut(s) | 23 |
| MvaI | CCWGG | 1 cut(s) | 23 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 156, 165, 171, 177 |
| NdeII | GATC | 1 cut(s) | 64 |
| NlaIII | CATG | 1 cut(s) | 59 |
| PfeI | GAWTC | 1 cut(s) | 16 |
| PfoI | TCCNGGA | 1 cut(s) | 21 |
| PkrI | GCNGC | 4 cut(s) | 61, 167, 170, 173 |
| Psp6I | CCWGG | 1 cut(s) | 21 |
| PspGI | CCWGG | 1 cut(s) | 21 |
| SatI | GCNGC | 4 cut(s) | 60, 166, 169, 172 |
| Sau3AI | GATC | 1 cut(s) | 64 |
| ScrFI | CCNGG | 1 cut(s) | 23 |
| SetI | ASST | 4 cut(s) | 36, 140, 252, 259 |
| SgeI | CNNG | 9 cut(s) | 34, 35, 47, 68, 142, 147, 172, 219, 249 |
| SmlI | CTYRAG | 1 cut(s) | 205 |
| SmoI | CTYRAG | 1 cut(s) | 205 |
| Sse9I | AATT | 2 cut(s) | 117, 214 |
| SsiI | CCGC | 1 cut(s) | 171 |
| StyD4I | CCNGG | 1 cut(s) | 21 |
| TaqI | TCGA | 1 cut(s) | 134 |
| TasI | AATT | 2 cut(s) | 117, 214 |
| TauI | GCSGC | 1 cut(s) | 174 |
| TfiI | GAWTC | 1 cut(s) | 16 |
| TseI | GCWGC | 3 cut(s) | 59, 165, 168 |
| XapI | RAATTY | 2 cut(s) | 117, 214 |