Mur ligase family, glutamate ligase domain
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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_4g37200 |
| malus_domestica | MD13G1002800.v1.1 |
| prunus_persica | Prupe.1G349600_v2.0.a1 |
| rosa_laevigata | RLG00000005615 |
| rosa_rugosa | Rorug04G0376600 |
| rosa_samantha | Rh4AG438200 Rh4BG447200 Rh4CG464400 Rh4DG445900 |
| rosa_wichuraiana | Rw4G037480 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccII | CGCG | 1 cut(s) | 24 |
| AciI | CCGC | 2 cut(s) | 22, 615 |
| AcsI | RAATTY | 2 cut(s) | 123, 174 |
| AcuI | CTGAAG | 1 cut(s) | 263 |
| AfaI | GTAC | 1 cut(s) | 351 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 649 |
| AgsI | TTSAA | 1 cut(s) | 623 |
| AluBI | AGCT | 8 cut(s) | 98, 107, 241, 257, 266, 378, 626, 655 |
| AluI | AGCT | 8 cut(s) | 98, 107, 241, 257, 266, 378, 626, 655 |
| Alw21I | GWGCWC | 1 cut(s) | 657 |
| Alw26I | GTCTC | 1 cut(s) | 270 |
| AoxI | GGCC | 1 cut(s) | 533 |
| ApoI | RAATTY | 2 cut(s) | 123, 174 |
| AspLEI | GCGC | 2 cut(s) | 26, 494 |
| AsuHPI | GGTGA | 2 cut(s) | 211, 580 |
| BanII | GRGCYC | 1 cut(s) | 657 |
| Bbv12I | GWGCWC | 1 cut(s) | 657 |
| BbvCI | CCTCAGC | 1 cut(s) | 108 |
| BccI | CCATC | 2 cut(s) | 188, 480 |
| BcoDI | GTCTC | 1 cut(s) | 270 |
| BfaI | CTAG | 2 cut(s) | 38, 658 |
| BmiI | GGNNCC | 1 cut(s) | 300 |
| BmsI | GCATC | 1 cut(s) | 17 |
| BpmI | CTGGAG | 2 cut(s) | 292, 400 |
| Bpu10I | CCTNAGC | 2 cut(s) | 108, 537 |
| BsaJI | CCNNGG | 1 cut(s) | 495 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 373, 379, 403, 409 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 649 |
| Bse1I | ACTGG | 1 cut(s) | 275 |
| BseDI | CCNNGG | 1 cut(s) | 495 |
| BseGI | GGATG | 1 cut(s) | 199 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 649 |
| BseMII | CTCAG | 4 cut(s) | 99, 108, 438, 528 |
| BseNI | ACTGG | 1 cut(s) | 275 |
| Bsh1236I | CGCG | 1 cut(s) | 24 |
| BshFI | GGCC | 1 cut(s) | 535 |
| BsiHKAI | GWGCWC | 1 cut(s) | 657 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 649 |
| BsmAI | GTCTC | 1 cut(s) | 270 |
| BsmI | GAATGC | 2 cut(s) | 216, 501 |
| BsnI | GGCC | 1 cut(s) | 535 |
| Bsp1286I | GDGCHC | 1 cut(s) | 657 |
| Bsp143I | GATC | 2 cut(s) | 40, 246 |
| BspACI | CCGC | 2 cut(s) | 22, 615 |
| BspANI | GGCC | 1 cut(s) | 535 |
| BspCNI | CTCAG | 4 cut(s) | 100, 107, 439, 529 |
| BspFNI | CGCG | 1 cut(s) | 24 |
| BspLI | GGNNCC | 1 cut(s) | 300 |
| BsrI | ACTGG | 1 cut(s) | 275 |
| BssECI | CCNNGG | 1 cut(s) | 495 |
| BssMI | GATC | 2 cut(s) | 40, 246 |
| Bst4CI | ACNGT | 5 cut(s) | 79, 330, 354, 409, 444 |
| BstC8I | GCNNGC | 2 cut(s) | 6, 566 |
| BstDEI | CTNAG | 4 cut(s) | 94, 108, 447, 537 |
| BstF5I | GGATG | 1 cut(s) | 199 |
| BstFNI | CGCG | 1 cut(s) | 24 |
| BstHHI | GCGC | 2 cut(s) | 26, 494 |
| BstKTI | GATC | 2 cut(s) | 43, 249 |
| BstMAI | GTCTC | 1 cut(s) | 270 |
| BstMBI | GATC | 2 cut(s) | 40, 246 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 104, 263, 498 |
| BstNSI | RCATGY | 1 cut(s) | 134 |
| BstUI | CGCG | 1 cut(s) | 24 |
| BsuRI | GGCC | 1 cut(s) | 535 |
| BtsCI | GGATG | 1 cut(s) | 199 |
| BtsIMutI | CAGTG | 1 cut(s) | 414 |
| Cac8I | GCNNGC | 2 cut(s) | 6, 566 |
| CfoI | GCGC | 2 cut(s) | 26, 494 |
| Csp6I | GTAC | 1 cut(s) | 350 |
| CviAII | CATG | 6 cut(s) | 131, 170, 484, 531, 645, 649 |
| CviQI | GTAC | 1 cut(s) | 350 |
| DdeI | CTNAG | 4 cut(s) | 94, 108, 447, 537 |
| DpnI | GATC | 2 cut(s) | 42, 248 |
| DpnII | GATC | 2 cut(s) | 40, 246 |
| Ecl136II | GAGCTC | 1 cut(s) | 655 |
| Eco24I | GRGCYC | 1 cut(s) | 657 |
| Eco53kI | GAGCTC | 1 cut(s) | 655 |
| Eco57I | CTGAAG | 1 cut(s) | 263 |
| EcoICRI | GAGCTC | 1 cut(s) | 655 |
| EcoRI | GAATTC | 1 cut(s) | 174 |
| EcoT22I | ATGCAT | 1 cut(s) | 650 |
| EcoT38I | GRGCYC | 1 cut(s) | 657 |
| FaeI | CATG | 6 cut(s) | 134, 173, 487, 534, 648, 652 |
| FatI | CATG | 6 cut(s) | 130, 169, 483, 530, 644, 648 |
| FauI | CCCGC | 1 cut(s) | 29 |
| FokI | GGATG | 1 cut(s) | 206 |
| FriOI | GRGCYC | 1 cut(s) | 657 |
| FspBI | CTAG | 2 cut(s) | 38, 658 |
| GlaI | GCGC | 2 cut(s) | 25, 493 |
| GsuI | CTGGAG | 2 cut(s) | 292, 400 |
| HaeIII | GGCC | 1 cut(s) | 535 |
| HhaI | GCGC | 2 cut(s) | 26, 494 |
| Hin1II | CATG | 6 cut(s) | 134, 173, 487, 534, 648, 652 |
| Hin6I | GCGC | 2 cut(s) | 24, 492 |
| HinP1I | GCGC | 2 cut(s) | 24, 492 |
| HindIII | AAGCTT | 1 cut(s) | 624 |
| HinfI | GANTC | 5 cut(s) | 17, 92, 166, 202, 637 |
| HphI | GGTGA | 2 cut(s) | 211, 580 |
| Hpy188I | TCNGA | 1 cut(s) | 448 |
| Hpy188III | TCNNGA | 2 cut(s) | 38, 620 |
| HpyAV | CCTTC | 1 cut(s) | 406 |
| HpyCH4III | ACNGT | 5 cut(s) | 79, 330, 354, 409, 444 |
| HpyCH4V | TGCA | 4 cut(s) | 4, 399, 601, 648 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 104, 263, 498 |
| HpyF3I | CTNAG | 4 cut(s) | 94, 108, 447, 537 |
| Hsp92II | CATG | 6 cut(s) | 134, 173, 487, 534, 648, 652 |
| HspAI | GCGC | 2 cut(s) | 24, 492 |
| Kzo9I | GATC | 2 cut(s) | 40, 246 |
| LmnI | GCTCC | 1 cut(s) | 652 |
| LweI | GCATC | 1 cut(s) | 17 |
| MaeI | CTAG | 2 cut(s) | 38, 658 |
| MaeIII | GTNAC | 4 cut(s) | 73, 360, 515, 586 |
| MalI | GATC | 2 cut(s) | 42, 248 |
| MboI | GATC | 2 cut(s) | 40, 246 |
| MboII | GAAGA | 3 cut(s) | 256, 332, 497 |
| MhlI | GDGCHC | 1 cut(s) | 657 |
| MluCI | AATT | 4 cut(s) | 123, 174, 323, 545 |
| MlyI | GAGTC | 1 cut(s) | 86 |
| MmeI | TCCRAC | 2 cut(s) | 365, 371 |
| MnlI | CCTC | 6 cut(s) | 56, 60, 103, 200, 442, 490 |
| Mph1103I | ATGCAT | 1 cut(s) | 650 |
| MseI | TTAA | 5 cut(s) | 222, 425, 462, 477, 548 |
| MslI | CAYNNNNRTG | 1 cut(s) | 135 |
| MspA1I | CMGCKG | 1 cut(s) | 266 |
| Mva1269I | GAATGC | 2 cut(s) | 216, 501 |
| MvnI | CGCG | 1 cut(s) | 24 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 104, 263, 498 |
| NdeII | GATC | 2 cut(s) | 40, 246 |
| NlaIII | CATG | 6 cut(s) | 134, 173, 487, 534, 648, 652 |
| NlaIV | GGNNCC | 1 cut(s) | 300 |
| NmeAIII | GCCGAG | 1 cut(s) | 520 |
| NmuCI | GTSAC | 2 cut(s) | 73, 586 |
| NsiI | ATGCAT | 1 cut(s) | 650 |
| NspI | RCATGY | 1 cut(s) | 134 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 211 |
| PctI | GAATGC | 2 cut(s) | 216, 501 |
| PfeI | GAWTC | 4 cut(s) | 17, 166, 202, 637 |
| PleI | GAGTC | 1 cut(s) | 86 |
| PpsI | GAGTC | 1 cut(s) | 86 |
| Psp124BI | GAGCTC | 1 cut(s) | 657 |
| PspN4I | GGNNCC | 1 cut(s) | 300 |
| PvuII | CAGCTG | 1 cut(s) | 266 |
| RsaI | GTAC | 1 cut(s) | 351 |
| RsaNI | GTAC | 1 cut(s) | 350 |
| RseI | CAYNNNNRTG | 1 cut(s) | 135 |
| SacI | GAGCTC | 1 cut(s) | 657 |
| SaqAI | TTAA | 5 cut(s) | 222, 425, 462, 477, 548 |
| Sau3AI | GATC | 2 cut(s) | 40, 246 |
| SchI | GAGTC | 1 cut(s) | 86 |
| SduI | GDGCHC | 1 cut(s) | 657 |
| SfaNI | GCATC | 1 cut(s) | 17 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 135 |
| Sse9I | AATT | 4 cut(s) | 123, 174, 323, 545 |
| SsiI | CCGC | 2 cut(s) | 22, 615 |
| SspMI | CTAG | 2 cut(s) | 38, 658 |
| SstI | GAGCTC | 1 cut(s) | 657 |
| TaaI | ACNGT | 5 cut(s) | 79, 330, 354, 409, 444 |
| TaqI | TCGA | 3 cut(s) | 127, 205, 249 |
| TasI | AATT | 4 cut(s) | 123, 174, 323, 545 |
| TfiI | GAWTC | 4 cut(s) | 17, 166, 202, 637 |
| Tru1I | TTAA | 5 cut(s) | 222, 425, 462, 477, 548 |
| Tru9I | TTAA | 5 cut(s) | 222, 425, 462, 477, 548 |
| TscAI | CASTG | 1 cut(s) | 414 |
| TseFI | GTSAC | 2 cut(s) | 73, 586 |
| Tsp45I | GTSAC | 2 cut(s) | 73, 586 |
| TspDTI | ATGAA | 2 cut(s) | 249, 500 |
| TspRI | CASTG | 1 cut(s) | 414 |
| XapI | RAATTY | 2 cut(s) | 123, 174 |
| XbaI | TCTAGA | 1 cut(s) | 37 |
| XceI | RCATGY | 1 cut(s) | 134 |
| XspI | CTAG | 2 cut(s) | 38, 658 |
| Zsp2I | ATGCAT | 1 cut(s) | 650 |