MD13G1119700.v1.1

molybdenum cofactor sulfurtransferase activity

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr13
OG0008861
Physical Location & Seq
Forward (+)
8768402 .. 8769322
921 bp
Loading structure...
UTR
Exon/CDS
Intron
MD13G1119700.v1.1.491

Sequence Viewer

Length: 921 bp
ATGTTTCCTGCTCACTTGATAGCAGAAGCCATATCCTCACTCAGAGGCCTTGATCTGAGATGGTCAGGTCCAATCACACCAAGTGAGATGCTCTATGTTCAGCAATACATCTTCGCAAAGTACCCAGAATACTGCAATGGACTAGTGGAAGATGTCGAAAAACTATACATCGATAATCTTTTGATCAACAAAGAATCCTCAGGAACTCCACCCTATGATAAGCTCAAGTTACCCAAGAGTGTGACAGCAAAGGAGTTGTCCCCATTCAGCAGCACTCACTCCGACTTGGACAGGACTAAGATGGAACCCTCAAGACTTCTCGACATCCTGACCAAGAAATCCTCGTTCCAGGGTAACTTTGTATCCATTCCTGAGGTCCAAGCAAGGAATAGGGCATTGAAGCAATGTGGGTTGCAAGAGGAGGACTATTTAGTCATTTTCATGTCAAATTACAAAGATGCAATGGTGATGATTGGTGAGAGCTACCCTTTCTTCAGAGGAAATTACTATATGACCATTGTGGGAAAGGAGACTGATCCCATAAGGGACTTTGCAAGTACCAAAGAATCTAGGGTTATTTCAGCACCAGAAACTTGGTTGGATTTGAGGATAAAAGGGTCACAACTTAGCCAGTACTTTAGGAGAAAGTGCAAGTATAGTCCCAAAGGAATGTTTTCCTATCCTGCCACTGTCAATGGGACTAAATACTCAATGCATTGGATCTCGGAGGCACATAGGAACTCATGGCATGTCCTGCTTGACGCAACCGGCTTGGTTTTGGGGGAGGACCGGTTAACGCTTGCGCTGTACCGACCGGATTTTGTGATGTGCACCCTCAACAATACACACACCCAGCCATCCAGCATCACTTGCCTCTTGGTCAGGAAAAACACATTTGACACTATGACTAATCCAGCCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

307

Amino Acids

34.98

Weight (kDa)

8.44

Isoelectric Point (pI)

44.98

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 431
AclWI GGATC 2 cut(s) 530, 728
AcuI CTGAAG 1 cut(s) 478
AdeI CACNNNGTG 1 cut(s) 83
AfaI GTAC 4 cut(s) 122, 559, 635, 809
AgeI ACCGGT 1 cut(s) 789
AgsI TTSAA 1 cut(s) 400
AhlI ACTAGT 1 cut(s) 142
AjnI CCWGG 1 cut(s) 348
AluBI AGCT 2 cut(s) 223, 483
AluI AGCT 2 cut(s) 223, 483
Alw21I GWGCWC 1 cut(s) 833
Alw26I GTCTC 1 cut(s) 524
Alw44I GTGCAC 1 cut(s) 829
AlwI GGATC 2 cut(s) 530, 728
AoxI GGCC 1 cut(s) 46
ApaLI GTGCAC 1 cut(s) 829
ApeKI GCWGC 1 cut(s) 270
ArsI GACNNNNNNTTYG 2 cut(s) 242, 274
AsiGI ACCGGT 1 cut(s) 789
Asp700I GAANNNNTTC 1 cut(s) 673
AspLEI GCGC 1 cut(s) 805
AspS9I GGNCC 3 cut(s) 68, 376, 787
AsuHPI GGTGA 2 cut(s) 478, 488
AvaII GGWCC 3 cut(s) 68, 376, 787
AxyI CCTNAGG 2 cut(s) 199, 372
BaeGI GKGCMC 1 cut(s) 833
Bbv12I GWGCWC 1 cut(s) 833
BbvI GCAGC 1 cut(s) 282
BccI CCATC 3 cut(s) 54, 295, 865
BciT130I CCWGG 1 cut(s) 350
BciVI GTATCC 1 cut(s) 373
BclI TGATCA 1 cut(s) 183
BcoDI GTCTC 1 cut(s) 524
BcuI ACTAGT 1 cut(s) 142
BfaI CTAG 3 cut(s) 143, 570, 919
BfuI GTATCC 1 cut(s) 373
BisI GCNGC 1 cut(s) 271
BlsI GCNGC 1 cut(s) 272
BmcAI AGTACT 1 cut(s) 635
Bme1390I CCNGG 1 cut(s) 350
Bme18I GGWCC 3 cut(s) 68, 376, 787
BmgT120I GGNCC 3 cut(s) 68, 376, 787
BmiI GGNNCC 1 cut(s) 306
BmrFI CCNGG 1 cut(s) 350
BmsI GCATC 3 cut(s) 78, 448, 873
BpuEI CTTGAG 2 cut(s) 209, 295
Bsa29I ATCGAT 1 cut(s) 171
BsaJI CCNNGG 1 cut(s) 349
BsaWI WCCGGW 2 cut(s) 789, 814
BsaXI ACNNNNNCTCC 2 cut(s) 776, 806
Bse118I RCCGGY 2 cut(s) 767, 789
Bse1I ACTGG 1 cut(s) 631
Bse21I CCTNAGG 2 cut(s) 199, 372
Bse3DI GCAATG 3 cut(s) 142, 410, 468
BseBI CCWGG 1 cut(s) 350
BseCI ATCGAT 1 cut(s) 171
BseDI CCNNGG 1 cut(s) 349
BseGI GGATG 2 cut(s) 324, 857
BseMI GCAATG 3 cut(s) 142, 410, 468
BseMII CTCAG 4 cut(s) 47, 55, 213, 363
BseNI ACTGG 1 cut(s) 631
BseRI GAGGAG 1 cut(s) 434
BseSI GKGCMC 1 cut(s) 833
BseXI GCAGC 1 cut(s) 282
BseYI CCCAGC 1 cut(s) 852
Bsh1285I CGRYCG 1 cut(s) 815
BshFI GGCC 1 cut(s) 48
BshTI ACCGGT 1 cut(s) 789
BshVI ATCGAT 1 cut(s) 171
BsiEI CGRYCG 1 cut(s) 815
BsiHKAI GWGCWC 1 cut(s) 833
BsiSI CCGG 3 cut(s) 768, 790, 815
BslFI GGGAC 4 cut(s) 244, 560, 645, 712
BsmAI GTCTC 1 cut(s) 524
BsmFI GGGAC 4 cut(s) 244, 560, 645, 712
BsnI GGCC 1 cut(s) 48
Bsp1286I GDGCHC 1 cut(s) 833
Bsp143I GATC 4 cut(s) 52, 183, 535, 720
BspANI GGCC 1 cut(s) 48
BspCNI CTCAG 4 cut(s) 48, 54, 212, 364
BspDI ATCGAT 1 cut(s) 171
BspLI GGNNCC 1 cut(s) 306
BspPI GGATC 2 cut(s) 530, 728
BsrDI GCAATG 3 cut(s) 142, 410, 468
BsrFI RCCGGY 2 cut(s) 767, 789
BsrI ACTGG 1 cut(s) 631
BssAI RCCGGY 2 cut(s) 767, 789
BssECI CCNNGG 1 cut(s) 349
BssMI GATC 4 cut(s) 52, 183, 535, 720
Bst2UI CCWGG 1 cut(s) 350
Bst4CI ACNGT 1 cut(s) 691
BstAPI GCANNNNNTGC 2 cut(s) 754, 870
BstC8I GCNNGC 1 cut(s) 801
BstDEI CTNAG 6 cut(s) 41, 56, 199, 297, 372, 626
BstF5I GGATG 2 cut(s) 324, 857
BstHHI GCGC 1 cut(s) 805
BstKTI GATC 4 cut(s) 55, 186, 538, 723
BstMAI GTCTC 1 cut(s) 524
BstMBI GATC 4 cut(s) 52, 183, 535, 720
BstMCI CGRYCG 1 cut(s) 815
BstMWI GCNNNNNNNGC 2 cut(s) 754, 870
BstNI CCWGG 1 cut(s) 350
BstNSI RCATGY 1 cut(s) 752
BstSCI CCNGG 1 cut(s) 348
BstSLI GKGCMC 1 cut(s) 833
BstV1I GCAGC 1 cut(s) 282
BstX2I RGATCY 1 cut(s) 720
BstXI CCANNNNNNTGG 1 cut(s) 594
BstYI RGATCY 1 cut(s) 720
Bsu15I ATCGAT 1 cut(s) 171
Bsu36I CCTNAGG 2 cut(s) 199, 372
BsuI GTATCC 1 cut(s) 373
BsuRI GGCC 1 cut(s) 48
BsuTUI ATCGAT 1 cut(s) 171
BtsCI GGATG 2 cut(s) 324, 857
BtsIMutI CAGTG 1 cut(s) 687
Cac8I GCNNGC 1 cut(s) 801
CfoI GCGC 1 cut(s) 805
Cfr10I RCCGGY 2 cut(s) 767, 789
Cfr13I GGNCC 3 cut(s) 68, 376, 787
ClaI ATCGAT 1 cut(s) 171
CseI GACGC 1 cut(s) 770
Csp6I GTAC 4 cut(s) 121, 558, 634, 808
CspAI ACCGGT 1 cut(s) 789
CviAII CATG 3 cut(s) 442, 744, 749
CviJI RGCY 8 cut(s) 29, 48, 223, 483, 630, 771, 856, 917
CviKI_1 RGCY 8 cut(s) 29, 48, 223, 483, 630, 771, 856, 917
CviQI GTAC 4 cut(s) 121, 558, 634, 808
DdeI CTNAG 6 cut(s) 41, 56, 199, 297, 372, 626
DpnI GATC 4 cut(s) 54, 185, 537, 722
DpnII GATC 4 cut(s) 52, 183, 535, 720
DraIII CACNNNGTG 1 cut(s) 83
DrdI GACNNNNNNGTC 1 cut(s) 431
DseDI GACNNNNNNGTC 1 cut(s) 431
Eco147I AGGCCT 1 cut(s) 48
Eco47I GGWCC 3 cut(s) 68, 376, 787
Eco57I CTGAAG 1 cut(s) 478
Eco81I CCTNAGG 2 cut(s) 199, 372
EcoRII CCWGG 1 cut(s) 348
EcoT22I ATGCAT 1 cut(s) 717
FaeI CATG 3 cut(s) 445, 747, 752
FaqI GGGAC 4 cut(s) 244, 560, 645, 712
FatI CATG 3 cut(s) 441, 743, 748
FbaI TGATCA 1 cut(s) 183
Fnu4HI GCNGC 1 cut(s) 271
FokI GGATG 2 cut(s) 311, 844
Fsp4HI GCNGC 1 cut(s) 271
FspBI CTAG 3 cut(s) 143, 570, 919
GlaI GCGC 1 cut(s) 804
GluI GCNGC 1 cut(s) 271
GsaI CCCAGC 1 cut(s) 856
HaeIII GGCC 1 cut(s) 48
HapII CCGG 3 cut(s) 768, 790, 815
HgaI GACGC 1 cut(s) 770
HhaI GCGC 1 cut(s) 805
Hin1II CATG 3 cut(s) 445, 747, 752
Hin6I GCGC 1 cut(s) 803
HinP1I GCGC 1 cut(s) 803
HincII GTYRAC 1 cut(s) 795
HindII GTYRAC 1 cut(s) 795
HinfI GANTC 2 cut(s) 194, 566
HpaI GTTAAC 1 cut(s) 795
HpaII CCGG 3 cut(s) 768, 790, 815
HphI GGTGA 2 cut(s) 478, 488
Hpy166II GTNNAC 2 cut(s) 795, 831
Hpy188I TCNGA 5 cut(s) 44, 57, 283, 497, 727
Hpy188III TCNNGA 6 cut(s) 201, 312, 320, 328, 371, 883
Hpy8I GTNNAC 2 cut(s) 795, 831
HpyCH4III ACNGT 1 cut(s) 691
HpyCH4V TGCA 7 cut(s) 135, 415, 461, 554, 651, 715, 831
HpyF10VI GCNNNNNNNGC 2 cut(s) 754, 870
HpyF3I CTNAG 6 cut(s) 41, 56, 199, 297, 372, 626
Hsp92II CATG 3 cut(s) 445, 747, 752
HspAI GCGC 1 cut(s) 803
Ksp22I TGATCA 1 cut(s) 183
KspAI GTTAAC 1 cut(s) 795
Kzo9I GATC 4 cut(s) 52, 183, 535, 720
Lsp1109I GCAGC 1 cut(s) 282
LweI GCATC 3 cut(s) 78, 448, 873
MaeI CTAG 3 cut(s) 143, 570, 919
MaeIII GTNAC 4 cut(s) 228, 241, 353, 618
MalI GATC 4 cut(s) 54, 185, 537, 722
MboI GATC 4 cut(s) 52, 183, 535, 720
MboII GAAGA 3 cut(s) 103, 161, 484
MflI RGATCY 1 cut(s) 720
MhlI GDGCHC 1 cut(s) 833
MluCI AATT 2 cut(s) 448, 502
MmeI TCCRAC 2 cut(s) 306, 579
Mph1103I ATGCAT 1 cut(s) 717
MroXI GAANNNNTTC 1 cut(s) 673
MseI TTAA 1 cut(s) 794
MslI CAYNNNNRTG 1 cut(s) 440
MspI CCGG 3 cut(s) 768, 790, 815
MspR9I CCNGG 1 cut(s) 350
MvaI CCWGG 1 cut(s) 350
MwoI GCNNNNNNNGC 2 cut(s) 754, 870
NdeII GATC 4 cut(s) 52, 183, 535, 720
NlaIII CATG 3 cut(s) 445, 747, 752
NlaIV GGNNCC 1 cut(s) 306
NmuCI GTSAC 2 cut(s) 241, 618
NsiI ATGCAT 1 cut(s) 717
NspI RCATGY 1 cut(s) 752
PceI AGGCCT 1 cut(s) 48
PdmI GAANNNNTTC 1 cut(s) 673
PfeI GAWTC 2 cut(s) 194, 566
PinAI ACCGGT 1 cut(s) 789
PkrI GCNGC 1 cut(s) 272
Psp6I CCWGG 1 cut(s) 348
PspFI CCCAGC 1 cut(s) 852
PspGI CCWGG 1 cut(s) 348
PspN4I GGNNCC 1 cut(s) 306
PspPI GGNCC 3 cut(s) 68, 376, 787
PsuI RGATCY 1 cut(s) 720
RsaI GTAC 4 cut(s) 122, 559, 635, 809
RsaNI GTAC 4 cut(s) 121, 558, 634, 808
RseI CAYNNNNRTG 1 cut(s) 440
SaqAI TTAA 1 cut(s) 794
SatI GCNGC 1 cut(s) 271
Sau3AI GATC 4 cut(s) 52, 183, 535, 720
Sau96I GGNCC 3 cut(s) 68, 376, 787
ScaI AGTACT 1 cut(s) 635
ScrFI CCNGG 1 cut(s) 350
SduI GDGCHC 1 cut(s) 833
SetI ASST 4 cut(s) 70, 225, 378, 485
SfaNI GCATC 3 cut(s) 78, 448, 873
SinI GGWCC 3 cut(s) 68, 376, 787
SmiMI CAYNNNNRTG 1 cut(s) 440
SmlI CTYRAG 2 cut(s) 224, 310
SmoI CTYRAG 2 cut(s) 224, 310
SpeI ACTAGT 1 cut(s) 142
Sse9I AATT 2 cut(s) 448, 502
SseBI AGGCCT 1 cut(s) 48
SspMI CTAG 3 cut(s) 143, 570, 919
StuI AGGCCT 1 cut(s) 48
StyD4I CCNGG 1 cut(s) 348
TaaI ACNGT 1 cut(s) 691
TaqI TCGA 3 cut(s) 156, 171, 321
TasI AATT 2 cut(s) 448, 502
TatI WGTACW 1 cut(s) 633
TfiI GAWTC 2 cut(s) 194, 566
Tru1I TTAA 1 cut(s) 794
Tru9I TTAA 1 cut(s) 794
TscAI CASTG 1 cut(s) 694
TseFI GTSAC 2 cut(s) 241, 618
TseI GCWGC 1 cut(s) 270
Tsp45I GTSAC 2 cut(s) 241, 618
TspDTI ATGAA 1 cut(s) 430
TspRI CASTG 1 cut(s) 694
VneI GTGCAC 1 cut(s) 829
VpaK11BI GGWCC 3 cut(s) 68, 376, 787
XceI RCATGY 1 cut(s) 752
XmnI GAANNNNTTC 1 cut(s) 673
XspI CTAG 3 cut(s) 143, 570, 919
ZrmI AGTACT 1 cut(s) 635
Zsp2I ATGCAT 1 cut(s) 717
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.