Rmu_sc0004036.1_g000001

molybdenum cofactor sulfurtransferase activity

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0004036.1
OG0008861
Physical Location & Seq
Forward (+)
1 .. 580
580 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0004036.1_g000001.1.cds

Sequence Viewer

Length: 580 bp
ttcatttcaagggacatttgtgtcaatcccagaagtccaagccaggaatagggccttgaagcattgtggtttgccagaggaggactatttagtcctcttcatggcaaattataaagatgctatggtaatgattggggagagttatccctttttcaagggaaattactacatgaccatagtcaatgaagagttggattctataagggagtatgcctctaacaaagaatcaagggtcatatcagctccagaaacttggctggatctgaggataaaagggtcacaacttagccagtattttaggagaaaatgcaagcatagtccaaagggactattctcttatccagccacagtcaatgagactaaatactcgatgcattggatttctgaggctcataggaattcatggcatgttcttcttgatgcaactggtctaaatttaggggaggaccggctagcgcttgctatgtaccgcccggattttgttctgtgcaccctcaacaatacacattcccagccatctagaattacctgcctgttggttaggagaaagacatttgatactatggcacctccatcctag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

192

Amino Acids

22.17

Weight (kDa)

8.63

Isoelectric Point (pI)

55.46

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 112
AasI GACNNNNNNGTC 2 cut(s) 20, 90
Acc36I ACCTGC 1 cut(s) 537
AccB1I GGYRCC 1 cut(s) 566
AciI CCGC 1 cut(s) 470
AclWI GGATC 1 cut(s) 268
AcsI RAATTY 2 cut(s) 398, 434
AfaI GTAC 1 cut(s) 468
AfeI AGCGCT 1 cut(s) 457
AfiI CCNNNNNNNGG 2 cut(s) 49, 101
AgsI TTSAA 3 cut(s) 9, 59, 155
AjnI CCWGG 1 cut(s) 42
AluBI AGCT 1 cut(s) 243
AluI AGCT 1 cut(s) 243
Alw21I GWGCWC 1 cut(s) 492
Alw26I GTCTC 1 cut(s) 351
Alw44I GTGCAC 1 cut(s) 488
AlwI GGATC 1 cut(s) 268
Aor51HI AGCGCT 1 cut(s) 457
AoxI GGCC 1 cut(s) 52
ApaLI GTGCAC 1 cut(s) 488
ApoI RAATTY 2 cut(s) 398, 434
AspLEI GCGC 1 cut(s) 458
AspS9I GGNCC 2 cut(s) 52, 446
AsuC2I CCSGG 1 cut(s) 474
AsuNHI GCTAGC 1 cut(s) 452
AvaII GGWCC 1 cut(s) 446
BaeGI GKGCMC 1 cut(s) 492
BanI GGYRCC 1 cut(s) 566
Bbv12I GWGCWC 1 cut(s) 492
BccI CCATC 1 cut(s) 524
BciT130I CCWGG 1 cut(s) 44
BcnI CCSGG 1 cut(s) 474
BcoDI GTCTC 1 cut(s) 351
BfaI CTAG 3 cut(s) 453, 520, 578
BfoI RGCGCY 1 cut(s) 459
BfuAI ACCTGC 1 cut(s) 537
Bme1390I CCNGG 2 cut(s) 44, 474
Bme18I GGWCC 1 cut(s) 446
BmgT120I GGNCC 2 cut(s) 52, 446
BmiI GGNNCC 1 cut(s) 568
BmrFI CCNGG 2 cut(s) 44, 474
BmsI GCATC 3 cut(s) 107, 361, 410
BmtI GCTAGC 1 cut(s) 456
BoxI GACNNNNGTC 1 cut(s) 177
BplI GAGNNNNNCTC 2 cut(s) 198, 230
BpmI CTGGAG 1 cut(s) 229
BpuMI CCSGG 1 cut(s) 474
Bsc4I CCNNNNNNNGG 2 cut(s) 49, 101
Bse118I RCCGGY 1 cut(s) 448
Bse1I ACTGG 2 cut(s) 290, 431
BseBI CCWGG 1 cut(s) 44
BseGI GGATG 1 cut(s) 573
BseLI CCNNNNNNNGG 2 cut(s) 49, 101
BseMII CTCAG 2 cut(s) 255, 376
BseNI ACTGG 2 cut(s) 290, 431
BseRI GAGGAG 1 cut(s) 93
BseSI GKGCMC 1 cut(s) 492
BseYI CCCAGC 1 cut(s) 511
BshFI GGCC 1 cut(s) 54
BshNI GGYRCC 1 cut(s) 566
BsiHKAI GWGCWC 1 cut(s) 492
BsiSI CCGG 2 cut(s) 449, 474
BslFI GGGAC 2 cut(s) 26, 340
BslI CCNNNNNNNGG 2 cut(s) 49, 101
BsmAI GTCTC 1 cut(s) 351
BsmFI GGGAC 2 cut(s) 26, 340
BsnI GGCC 1 cut(s) 54
Bsp1286I GDGCHC 1 cut(s) 492
Bsp143I GATC 1 cut(s) 260
BspACI CCGC 1 cut(s) 470
BspANI GGCC 1 cut(s) 54
BspCNI CTCAG 2 cut(s) 256, 377
BspLI GGNNCC 1 cut(s) 568
BspMI ACCTGC 1 cut(s) 537
BspOI GCTAGC 1 cut(s) 456
BspPI GGATC 1 cut(s) 268
BspT107I GGYRCC 1 cut(s) 566
BsrFI RCCGGY 1 cut(s) 448
BsrI ACTGG 2 cut(s) 290, 431
BssAI RCCGGY 1 cut(s) 448
BssMI GATC 1 cut(s) 260
Bst2UI CCWGG 1 cut(s) 44
Bst4CI ACNGT 1 cut(s) 350
Bst6I CTCTTC 2 cut(s) 102, 181
BstC8I GCNNGC 3 cut(s) 312, 454, 460
BstDEI CTNAG 3 cut(s) 264, 285, 385
BstF5I GGATG 1 cut(s) 573
BstH2I RGCGCY 1 cut(s) 459
BstHHI GCGC 1 cut(s) 458
BstKTI GATC 1 cut(s) 263
BstMAI GTCTC 1 cut(s) 351
BstMBI GATC 1 cut(s) 260
BstNI CCWGG 1 cut(s) 44
BstNSI RCATGY 1 cut(s) 411
BstPAI GACNNNNGTC 1 cut(s) 177
BstSCI CCNGG 2 cut(s) 42, 472
BstSLI GKGCMC 1 cut(s) 492
BstX2I RGATCY 1 cut(s) 260
BstXI CCANNNNNNTGG 1 cut(s) 253
BstYI RGATCY 1 cut(s) 260
BsuRI GGCC 1 cut(s) 54
BtsCI GGATG 1 cut(s) 573
BveI ACCTGC 1 cut(s) 537
Cac8I GCNNGC 3 cut(s) 312, 454, 460
CfoI GCGC 1 cut(s) 458
Cfr10I RCCGGY 1 cut(s) 448
Cfr13I GGNCC 2 cut(s) 52, 446
Csp6I GTAC 1 cut(s) 467
CviAII CATG 4 cut(s) 101, 170, 403, 408
CviJI RGCY 9 cut(s) 42, 54, 243, 257, 289, 345, 390, 452, 515
CviKI_1 RGCY 9 cut(s) 42, 54, 243, 257, 289, 345, 390, 452, 515
CviQI GTAC 1 cut(s) 467
DdeI CTNAG 3 cut(s) 264, 285, 385
DpnI GATC 1 cut(s) 262
DpnII GATC 1 cut(s) 260
DrdI GACNNNNNNGTC 2 cut(s) 20, 90
DseDI GACNNNNNNGTC 2 cut(s) 20, 90
Eam1104I CTCTTC 2 cut(s) 102, 181
EarI CTCTTC 2 cut(s) 102, 181
Eco47I GGWCC 1 cut(s) 446
Eco47III AGCGCT 1 cut(s) 457
EcoO109I RGGNCCY 1 cut(s) 52
EcoRI GAATTC 1 cut(s) 398
EcoRII CCWGG 1 cut(s) 42
EcoT22I ATGCAT 1 cut(s) 376
FaeI CATG 4 cut(s) 104, 173, 406, 411
FaqI GGGAC 2 cut(s) 26, 340
FatI CATG 4 cut(s) 100, 169, 402, 407
FokI GGATG 1 cut(s) 560
FspBI CTAG 3 cut(s) 453, 520, 578
GlaI GCGC 1 cut(s) 457
GsaI CCCAGC 1 cut(s) 515
GsuI CTGGAG 1 cut(s) 229
HaeII RGCGCY 1 cut(s) 459
HaeIII GGCC 1 cut(s) 54
HapII CCGG 2 cut(s) 449, 474
HhaI GCGC 1 cut(s) 458
Hin1II CATG 4 cut(s) 104, 173, 406, 411
Hin6I GCGC 1 cut(s) 456
HinP1I GCGC 1 cut(s) 456
HinfI GANTC 2 cut(s) 195, 225
HpaII CCGG 2 cut(s) 449, 474
Hpy166II GTNNAC 1 cut(s) 490
Hpy188I TCNGA 2 cut(s) 265, 386
Hpy188III TCNNGA 3 cut(s) 246, 417, 520
Hpy8I GTNNAC 1 cut(s) 490
HpyCH4III ACNGT 1 cut(s) 350
HpyCH4V TGCA 4 cut(s) 310, 374, 423, 490
HpyF3I CTNAG 3 cut(s) 264, 285, 385
Hsp92II CATG 4 cut(s) 104, 173, 406, 411
HspAI GCGC 1 cut(s) 456
Kzo9I GATC 1 cut(s) 260
LmnI GCTCC 1 cut(s) 248
LweI GCATC 3 cut(s) 107, 361, 410
MaeI CTAG 3 cut(s) 453, 520, 578
MaeIII GTNAC 1 cut(s) 277
MalI GATC 1 cut(s) 262
MboI GATC 1 cut(s) 260
MboII GAAGA 3 cut(s) 89, 198, 405
MflI RGATCY 1 cut(s) 260
MhlI GDGCHC 1 cut(s) 492
MluCI AATT 5 cut(s) 107, 161, 398, 434, 523
MmeI TCCRAC 1 cut(s) 172
MnlI CCTC 9 cut(s) 71, 74, 105, 224, 259, 380, 437, 504, 580
Mph1103I ATGCAT 1 cut(s) 376
MspI CCGG 2 cut(s) 449, 474
MspR9I CCNGG 2 cut(s) 44, 474
MvaI CCWGG 1 cut(s) 44
NciI CCSGG 1 cut(s) 474
NdeII GATC 1 cut(s) 260
NheI GCTAGC 1 cut(s) 452
NlaIII CATG 4 cut(s) 104, 173, 406, 411
NlaIV GGNNCC 1 cut(s) 568
NmuCI GTSAC 1 cut(s) 277
NsiI ATGCAT 1 cut(s) 376
NspI RCATGY 1 cut(s) 411
PfeI GAWTC 2 cut(s) 195, 225
PshAI GACNNNNGTC 1 cut(s) 177
PsiI TTATAA 1 cut(s) 112
Psp6I CCWGG 1 cut(s) 42
PspFI CCCAGC 1 cut(s) 511
PspGI CCWGG 1 cut(s) 42
PspN4I GGNNCC 1 cut(s) 568
PspPI GGNCC 2 cut(s) 52, 446
PsuI RGATCY 1 cut(s) 260
RsaI GTAC 1 cut(s) 468
RsaNI GTAC 1 cut(s) 467
Sau3AI GATC 1 cut(s) 260
Sau96I GGNCC 2 cut(s) 52, 446
ScrFI CCNGG 2 cut(s) 44, 474
SduI GDGCHC 1 cut(s) 492
SetI ASST 3 cut(s) 245, 531, 572
SfaNI GCATC 3 cut(s) 107, 361, 410
SinI GGWCC 1 cut(s) 446
Sse9I AATT 5 cut(s) 107, 161, 398, 434, 523
SsiI CCGC 1 cut(s) 470
SspMI CTAG 3 cut(s) 453, 520, 578
StyD4I CCNGG 2 cut(s) 42, 472
TaaI ACNGT 1 cut(s) 350
TaqI TCGA 1 cut(s) 369
TasI AATT 5 cut(s) 107, 161, 398, 434, 523
TfiI GAWTC 2 cut(s) 195, 225
TseFI GTSAC 1 cut(s) 277
Tsp45I GTSAC 1 cut(s) 277
TspDTI ATGAA 3 cut(s) 89, 199, 391
VneI GTGCAC 1 cut(s) 488
VpaK11BI GGWCC 1 cut(s) 446
XapI RAATTY 2 cut(s) 398, 434
XbaI TCTAGA 1 cut(s) 519
XceI RCATGY 1 cut(s) 411
XspI CTAG 3 cut(s) 453, 520, 578
Zsp2I ATGCAT 1 cut(s) 376
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.