Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr13

Orthogroup ID

OG0009461

Physical Location & Seq

Genomic Coordinates Reverse (-)

10838444 .. 10840936

Gene Structure 2493 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD13G1140500.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1410 bp

ATGGAGATGAAGAAGTTGAGATGGGCAATGGACGGCAGCTTTTGGGACCTCGACGTGTCGACTCCGAGGACCCTCGACGGACTCGTCCGACCTGTTCCCGGCGACCCACTTCCTCTGGGCCTCACCCGAGGCCCCAGGCTTTCCCGGCCCAAGCAAATCGACTTCATGCAGCGCTTCATGGCCTCCATTTTCGTCCCTTCCTACACCGCCGCTGATGGCTTCACTCTCCAGCGAGTCCTCACCCTACCCATTGGCGAAAATTGGTTCGGGACGATTCTGGGTCAGTTCAATTTCCAGCGGTTTATCTCCGCCGTGAAAAAGAGCGGTAAGGAGGCGCCGCCGGACTCTGTATCTTCGTGGATGCAAAGCATTGGAACCCACCTGCGAGAGAAGTCCCTGTACGCCCTTTCCTTCTGTTCTGAGTTTTGGCTAACAGCTGATGACACATTGGTTTTGAGTGTGGACGGTTATGGCGATGACAAGAAACCCCGAAAGAAAGCACTTTTTCAGCACAAGTTTTCTCATCATAATTTGACAGTGGAGGCAGTTTGGCCCGGGCTTTTCGCTGACAAGCCCGGAAACTATTGGGATGTGCCATTCTCAATGTCACTTGATCTGGCTTCGGTTGCTTCTGACTCCGGGGCCAGTTATCGTGTATGTGCACGTCATAATTCAGGGACACCCGAGCGGTTTGACGGTGGCCAGAGCGATGGAGTTCCTGTTACCCTGCTTCCCGGTTTGTCTGTCACAAGTGCATTTTCCTTTAAGAAGAACTTTGAGCTTTGGAGGAGTCATGCTCAGAAGTTGAGAATGGTCCAACCATTTGATGTATTCCTTTCAAATCCTCATGTTTCGGCTTCCGGGATTATTGGTGCTGTGATGACTGCCTCGTTTGGTGATAGTTGGGTTAGGTCACAAATTGCAGACGATGATCCTCAGGGTTTTAGAGGTTTTAGTTTTTGGGCTCCTGGAGTAAAATCTGCCTTTCTAGCAGATATATTTGCATCAGCAACATTTACAGCCCAGCATGGAAACTTCCAAAGGCTATTCCTAGATCTTTCTCGCTTTCATGCCCGCCTGGATTTTCCTTCTGGTTCTAAGTTTCTTTCAGGTGCAGCACATCTAGCACAAGATTATTTTAATTCTCAACAGCCAAATTTGGAAGCTATTCAGGACATTTGCCCCAATGCCACACTTTCTCTTCAGCAGCAGATTTGTGGACCTGTCAGTTTCAGGGTTGAGTCAGGAGTTGCAGTTGAACTAAAGAACCGAGAGTGGAATATCCGCGTGGACGAGCCGGTGTTTGCTCTTGAATACGCGCTGCAAGTCCTCGGTTCAGCCAAAGCTGTCGCTTGGTATTCCCCAAAGCACCAGGAATGCATGATAGAGCTTCGTTTTTACGAAACATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005488 GO:0005515 GO:0005543 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0006810 GO:0006869 GO:0008150 GO:0008289 GO:0009507 GO:0009526 GO:0009527 GO:0009536 GO:0009707 GO:0009941 GO:0010876 GO:0012505 GO:0016020 GO:0019867 GO:0031090 GO:0031967 GO:0031968 GO:0031969 GO:0031975 GO:0032365 GO:0033036 GO:0034196 GO:0042170 GO:0042802 GO:0042803 GO:0043167 GO:0043168 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0046907 GO:0046983 GO:0051179 GO:0051234 GO:0051641 GO:0051649 GO:0070300 GO:0071702 GO:0098588 GO:0098805 GO:1901965 GO:1990052

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DUF3769

Protein Analysis

470

Amino Acids

52.31

Weight (kDa)

6.84

Isoelectric Point (pI)

37.1

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009461)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G06960 AT3G06960
fragaria_vesca	FvH4_4g21580 FvH4_4g21580 FvH4_4g21580
malus_domestica	MD13G1140500.v1.1 MD16G1135300.v1.1
prunus_persica	Prupe.1G104600_v2.0.a1 Prupe.1G104600_v2.0.a1 Prupe.1G104600_v2.0.a1
pyrus_communis	pycom13g12210
rosa_chinensis	RchiOBHm_Chr4g0427691
rosa_laevigata	RLG00000007216
rosa_multiflora	Rmu_co8242681.1_g000001 Rmu_sc0016038.1_g000002
rosa_roxburghii	Rroxscaffold_5G00369320
rosa_rugosa	Rorug04G0219500
rosa_samantha	Rh4AG275700 Rh4BG281700 Rh4CG297200 Rh4DG279100
rosa_wichuraiana	Rw4G023930

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	390
AasI	GACNNNNNNGTC	1 cut(s)	83
Acc36I	ACCTGC	1 cut(s)	390
AccB1I	GGYRCC	1 cut(s)	334
AccBSI	CCGCTC	2 cut(s)	324, 688
AccI	GTMKAC	1 cut(s)	59
AccII	CGCG	2 cut(s)	1287, 1319
AciI	CCGC	9 cut(s)	207, 210, 298, 309, 324, 338, 688, 1075, 1285
AclWI	GGATC	1 cut(s)	926
AcoI	YGGCCR	1 cut(s)	700
AcsI	RAATTY	1 cut(s)	1156
AcuI	CTGAAG	1 cut(s)	1187
AcyI	GRCGYC	1 cut(s)	335
AfaI	GTAC	1 cut(s)	401
AfeI	AGCGCT	1 cut(s)	173
AfiI	CCNNNNNNNGG	1 cut(s)	98
AflIII	ACRYGT	1 cut(s)	54
AgsI	TTSAA	4 cut(s)	289, 840, 1259, 1313
AjiI	CACGTC	2 cut(s)	55, 665
AjnI	CCWGG	4 cut(s)	134, 967, 1077, 1371
AluBI	AGCT	6 cut(s)	39, 437, 781, 1166, 1346, 1390
AluI	AGCT	6 cut(s)	39, 437, 781, 1166, 1346, 1390
Alw21I	GWGCWC	1 cut(s)	664
Alw44I	GTGCAC	1 cut(s)	660
AlwI	GGATC	1 cut(s)	926
Ama87I	CYCGRG	3 cut(s)	126, 554, 683
Aor51HI	AGCGCT	1 cut(s)	173
AoxI	GGCC	7 cut(s)	118, 130, 146, 180, 551, 642, 700
ApaLI	GTGCAC	1 cut(s)	660
ApeKI	GCWGC	5 cut(s)	36, 169, 1115, 1207, 1321
ApoI	RAATTY	1 cut(s)	1156
Asp700I	GAANNNNTTC	1 cut(s)	1167
AspLEI	GCGC	3 cut(s)	174, 337, 1321
AspS9I	GGNCC	9 cut(s)	46, 69, 118, 131, 147, 552, 642, 814, 1220
AsuC2I	CCSGG	8 cut(s)	99, 145, 555, 556, 576, 640, 735, 862
AsuHPI	GGTGA	3 cut(s)	115, 232, 908
AvaI	CYCGRG	3 cut(s)	126, 554, 683
AvaII	GGWCC	4 cut(s)	46, 69, 814, 1220
AxyI	CCTNAGG	1 cut(s)	936
BaeGI	GKGCMC	1 cut(s)	664
BalI	TGGCCA	1 cut(s)	702
BanI	GGYRCC	1 cut(s)	334
BanII	GRGCYC	1 cut(s)	967
BarI	GAAGNNNNNNTAC	2 cut(s)	383, 415
Bbv12I	GWGCWC	1 cut(s)	664
BbvI	GCAGC	5 cut(s)	48, 181, 1127, 1219, 1308
BccI	CCATC	3 cut(s)	15, 209, 704
BceAI	ACGGC	2 cut(s)	49, 296
BciT130I	CCWGG	4 cut(s)	136, 969, 1079, 1373
BcnI	CCSGG	8 cut(s)	99, 145, 555, 556, 576, 640, 735, 862
BfaI	CTAG	3 cut(s)	989, 1052, 1124
BfoI	RGCGCY	2 cut(s)	175, 338
BfuAI	ACCTGC	1 cut(s)	390
BglII	AGATCT	1 cut(s)	1054
BisI	GCNGC	7 cut(s)	37, 170, 210, 338, 1116, 1208, 1322
BlsI	GCNGC	7 cut(s)	38, 171, 211, 339, 1117, 1209, 1323
Bme18I	GGWCC	4 cut(s)	46, 69, 814, 1220
BmeT110I	CYCGRG	3 cut(s)	126, 554, 683
BmgBI	CACGTC	2 cut(s)	55, 665
BmgT120I	GGNCC	9 cut(s)	46, 69, 118, 131, 147, 552, 642, 814, 1220
BmiI	GGNNCC	7 cut(s)	47, 71, 133, 336, 376, 643, 966
BmsI	GCATC	2 cut(s)	351, 1013
BplI	GAGNNNNNCTC	2 cut(s)	781, 813
BpmI	CTGGAG	2 cut(s)	212, 990
BpuMI	CCSGG	8 cut(s)	99, 145, 555, 556, 576, 640, 735, 862
BsaHI	GRCGYC	1 cut(s)	335
BsaJI	CCNNGG	6 cut(s)	65, 127, 134, 554, 639, 1330
BsaXI	ACNNNNNCTCC	4 cut(s)	705, 735, 1239, 1269
Bsc4I	CCNNNNNNNGG	1 cut(s)	98
Bse118I	RCCGGY	1 cut(s)	1297
Bse1I	ACTGG	1 cut(s)	645
Bse21I	CCTNAGG	1 cut(s)	936
Bse3DI	GCAATG	1 cut(s)	33
BseBI	CCWGG	4 cut(s)	136, 969, 1079, 1373
BseDI	CCNNGG	6 cut(s)	65, 127, 134, 554, 639, 1330
BseGI	GGATG	2 cut(s)	366, 595
BseLI	CCNNNNNNNGG	1 cut(s)	98
BseMI	GCAATG	1 cut(s)	33
BseMII	CTCAG	3 cut(s)	411, 812, 950
BseNI	ACTGG	1 cut(s)	645
BseRI	GAGGAG	1 cut(s)	802
BseSI	GKGCMC	1 cut(s)	664
BseXI	GCAGC	5 cut(s)	48, 181, 1127, 1219, 1308
BseYI	CCCAGC	1 cut(s)	1023
BsgI	GTGCAG	1 cut(s)	1134
Bsh1236I	CGCG	2 cut(s)	1287, 1319
BshFI	GGCC	7 cut(s)	120, 132, 148, 182, 553, 644, 702
BshNI	GGYRCC	1 cut(s)	334
BsiHKAI	GWGCWC	1 cut(s)	664
BsiHKCI	CYCGRG	3 cut(s)	126, 554, 683
BsiSI	CCGG	9 cut(s)	99, 145, 341, 555, 576, 639, 735, 861, 1298
BslFI	GGGAC	5 cut(s)	59, 179, 283, 379, 691
BslI	CCNNNNNNNGG	1 cut(s)	98
BsmFI	GGGAC	5 cut(s)	59, 179, 283, 379, 691
BsmI	GAATGC	1 cut(s)	1382
BsnI	GGCC	7 cut(s)	120, 132, 148, 182, 553, 644, 702
BsoBI	CYCGRG	3 cut(s)	126, 554, 683
Bsp1286I	GDGCHC	2 cut(s)	664, 967
Bsp143I	GATC	3 cut(s)	613, 931, 1054
BspACI	CCGC	9 cut(s)	207, 210, 298, 309, 324, 338, 688, 1075, 1285
BspANI	GGCC	7 cut(s)	120, 132, 148, 182, 553, 644, 702
BspCNI	CTCAG	3 cut(s)	412, 811, 949
BspFNI	CGCG	2 cut(s)	1287, 1319
BspLI	GGNNCC	7 cut(s)	47, 71, 133, 336, 376, 643, 966
BspMI	ACCTGC	1 cut(s)	390
BspPI	GGATC	1 cut(s)	926
BspT107I	GGYRCC	1 cut(s)	334
BsrBI	CCGCTC	2 cut(s)	324, 688
BsrDI	GCAATG	1 cut(s)	33
BsrFI	RCCGGY	1 cut(s)	1297
BsrI	ACTGG	1 cut(s)	645
BssAI	RCCGGY	1 cut(s)	1297
BssECI	CCNNGG	6 cut(s)	65, 127, 134, 554, 639, 1330
BssMI	GATC	3 cut(s)	613, 931, 1054
BssNI	GRCGYC	1 cut(s)	335
Bst2UI	CCWGG	4 cut(s)	136, 969, 1079, 1373
Bst4CI	ACNGT	3 cut(s)	467, 538, 698
Bst6I	CTCTTC	1 cut(s)	1206
BstACI	GRCGYC	1 cut(s)	335
BstC8I	GCNNGC	1 cut(s)	1075
BstDEI	CTNAG	4 cut(s)	420, 798, 936, 1098
BstF5I	GGATG	2 cut(s)	366, 595
BstFNI	CGCG	2 cut(s)	1287, 1319
BstH2I	RGCGCY	2 cut(s)	175, 338
BstHHI	GCGC	3 cut(s)	174, 337, 1321
BstKTI	GATC	3 cut(s)	616, 934, 1057
BstMBI	GATC	3 cut(s)	613, 931, 1054
BstMWI	GCNNNNNNNGC	4 cut(s)	145, 626, 989, 1124
BstNI	CCWGG	4 cut(s)	136, 969, 1079, 1373
BstSLI	GKGCMC	1 cut(s)	664
BstUI	CGCG	2 cut(s)	1287, 1319
BstV1I	GCAGC	5 cut(s)	48, 181, 1127, 1219, 1308
BstX2I	RGATCY	1 cut(s)	1054
BstXI	CCANNNNNNTGG	1 cut(s)	710
BstYI	RGATCY	1 cut(s)	1054
Bsu36I	CCTNAGG	1 cut(s)	936
BsuRI	GGCC	7 cut(s)	120, 132, 148, 182, 553, 644, 702
BtgZI	GCGATG	2 cut(s)	489, 723
BtrI	CACGTC	2 cut(s)	55, 665
BtsCI	GGATG	2 cut(s)	366, 595
BtsIMutI	CAGTG	1 cut(s)	543
BveI	ACCTGC	1 cut(s)	390
Cac8I	GCNNGC	1 cut(s)	1075
CfoI	GCGC	3 cut(s)	174, 337, 1321
Cfr10I	RCCGGY	1 cut(s)	1297
Cfr13I	GGNCC	9 cut(s)	46, 69, 118, 131, 147, 552, 642, 814, 1220
Cfr9I	CCCGGG	1 cut(s)	554
Csp6I	GTAC	1 cut(s)	400
CviAII	CATG	7 cut(s)	166, 178, 794, 848, 1028, 1070, 1381
CviQI	GTAC	1 cut(s)	400
DdeI	CTNAG	4 cut(s)	420, 798, 936, 1098
DinI	GGCGCC	1 cut(s)	336
DpnI	GATC	3 cut(s)	615, 933, 1056
DpnII	GATC	3 cut(s)	613, 931, 1054
DrdI	GACNNNNNNGTC	1 cut(s)	83
DseDI	GACNNNNNNGTC	1 cut(s)	83
EaeI	YGGCCR	1 cut(s)	700
Eam1104I	CTCTTC	1 cut(s)	1206
EarI	CTCTTC	1 cut(s)	1206
EciI	GGCGGA	1 cut(s)	298
Eco24I	GRGCYC	1 cut(s)	967
Eco47I	GGWCC	4 cut(s)	46, 69, 814, 1220
Eco47III	AGCGCT	1 cut(s)	173
Eco57I	CTGAAG	1 cut(s)	1187
Eco81I	CCTNAGG	1 cut(s)	936
Eco88I	CYCGRG	3 cut(s)	126, 554, 683
EcoO109I	RGGNCCY	3 cut(s)	46, 69, 131
EcoRII	CCWGG	4 cut(s)	134, 967, 1077, 1371
EcoT22I	ATGCAT	1 cut(s)	1382
EcoT38I	GRGCYC	1 cut(s)	967
EgeI	GGCGCC	1 cut(s)	336
EheI	GGCGCC	1 cut(s)	336
FaeI	CATG	7 cut(s)	169, 181, 797, 851, 1031, 1073, 1384
FalI	AAGNNNNNCTT	2 cut(s)	758, 790
FaqI	GGGAC	5 cut(s)	59, 179, 283, 379, 691
FatI	CATG	7 cut(s)	165, 177, 793, 847, 1027, 1069, 1380
FauI	CCCGC	1 cut(s)	1082
FblI	GTMKAC	1 cut(s)	59
Fnu4HI	GCNGC	7 cut(s)	37, 170, 210, 338, 1116, 1208, 1322
FokI	GGATG	2 cut(s)	373, 602
FriOI	GRGCYC	1 cut(s)	967
Fsp4HI	GCNGC	7 cut(s)	37, 170, 210, 338, 1116, 1208, 1322
FspBI	CTAG	3 cut(s)	989, 1052, 1124
GlaI	GCGC	3 cut(s)	173, 336, 1320
GluI	GCNGC	7 cut(s)	37, 170, 210, 338, 1116, 1208, 1322
GsaI	CCCAGC	1 cut(s)	1027
GsuI	CTGGAG	2 cut(s)	212, 990
HaeII	RGCGCY	2 cut(s)	175, 338
HaeIII	GGCC	7 cut(s)	120, 132, 148, 182, 553, 644, 702
HapII	CCGG	9 cut(s)	99, 145, 341, 555, 576, 639, 735, 861, 1298
HhaI	GCGC	3 cut(s)	174, 337, 1321
Hin1I	GRCGYC	1 cut(s)	335
Hin1II	CATG	7 cut(s)	169, 181, 797, 851, 1031, 1073, 1384
Hin6I	GCGC	3 cut(s)	172, 335, 1319
HinP1I	GCGC	3 cut(s)	172, 335, 1319
HincII	GTYRAC	1 cut(s)	60
HindII	GTYRAC	1 cut(s)	60
HinfI	GANTC	8 cut(s)	61, 81, 234, 274, 344, 635, 790, 1241
HpaII	CCGG	9 cut(s)	99, 145, 341, 555, 576, 639, 735, 861, 1298
HphI	GGTGA	3 cut(s)	115, 232, 908
Hpy166II	GTNNAC	5 cut(s)	60, 463, 662, 1220, 1291
Hpy188I	TCNGA	5 cut(s)	66, 89, 421, 634, 801
Hpy188III	TCNNGA	4 cut(s)	268, 1172, 1245, 1310
Hpy8I	GTNNAC	5 cut(s)	60, 463, 662, 1220, 1291
Hpy99I	CGWCG	2 cut(s)	56, 80
HpyAV	CCTTC	3 cut(s)	207, 421, 1098
HpyCH4III	ACNGT	3 cut(s)	467, 538, 698
HpyCH4IV	ACGT	2 cut(s)	54, 664
HpyF10VI	GCNNNNNNNGC	4 cut(s)	145, 626, 989, 1124
HpyF3I	CTNAG	4 cut(s)	420, 798, 936, 1098
HpySE526I	ACGT	2 cut(s)	54, 664
Hsp92I	GRCGYC	1 cut(s)	335
Hsp92II	CATG	7 cut(s)	169, 181, 797, 851, 1031, 1073, 1384
HspAI	GCGC	3 cut(s)	172, 335, 1319
KasI	GGCGCC	1 cut(s)	334
Kzo9I	GATC	3 cut(s)	613, 931, 1054
LmnI	GCTCC	1 cut(s)	970
Lsp1109I	GCAGC	5 cut(s)	48, 181, 1127, 1219, 1308
LweI	GCATC	2 cut(s)	351, 1013
MaeI	CTAG	3 cut(s)	989, 1052, 1124
MaeII	ACGT	2 cut(s)	54, 664
MaeIII	GTNAC	4 cut(s)	606, 721, 745, 912
MalI	GATC	3 cut(s)	615, 933, 1056
MbiI	CCGCTC	2 cut(s)	324, 688
MboI	GATC	3 cut(s)	613, 931, 1054
MboII	GAAGA	4 cut(s)	22, 345, 781, 1193
MflI	RGATCY	1 cut(s)	1054
MhlI	GDGCHC	2 cut(s)	664, 967
MlsI	TGGCCA	1 cut(s)	702
MluCI	AATT	7 cut(s)	259, 289, 529, 670, 918, 1141, 1156
MluNI	TGGCCA	1 cut(s)	702
Mly113I	GGCGCC	1 cut(s)	335
MlyI	GAGTC	7 cut(s)	55, 75, 243, 338, 629, 799, 1250
MmeI	TCCRAC	2 cut(s)	112, 841
Mox20I	TGGCCA	1 cut(s)	702
Mph1103I	ATGCAT	1 cut(s)	1382
MroXI	GAANNNNTTC	1 cut(s)	1167
MscI	TGGCCA	1 cut(s)	702
MseI	TTAA	2 cut(s)	765, 1140
Msp20I	TGGCCA	1 cut(s)	702
MspA1I	CMGCKG	3 cut(s)	212, 298, 437
MspI	CCGG	9 cut(s)	99, 145, 341, 555, 576, 639, 735, 861, 1298
Mva1269I	GAATGC	1 cut(s)	1382
MvaI	CCWGG	4 cut(s)	136, 969, 1079, 1373
MvnI	CGCG	2 cut(s)	1287, 1319
MwoI	GCNNNNNNNGC	4 cut(s)	145, 626, 989, 1124
NarI	GGCGCC	1 cut(s)	335
NciI	CCSGG	8 cut(s)	99, 145, 555, 556, 576, 640, 735, 862
NdeII	GATC	3 cut(s)	613, 931, 1054
NlaIII	CATG	7 cut(s)	169, 181, 797, 851, 1031, 1073, 1384
NlaIV	GGNNCC	7 cut(s)	47, 71, 133, 336, 376, 643, 966
NmuCI	GTSAC	3 cut(s)	606, 745, 912
NsiI	ATGCAT	1 cut(s)	1382
PaqCI	CACCTGC	1 cut(s)	390
PcsI	WCGNNNNNNNCGW	2 cut(s)	81, 471
PctI	GAATGC	1 cut(s)	1382
PdmI	GAANNNNTTC	1 cut(s)	1167
PfeI	GAWTC	1 cut(s)	274
PfoI	TCCNGGA	2 cut(s)	860, 967
PkrI	GCNGC	7 cut(s)	38, 171, 211, 339, 1117, 1209, 1323
PleI	GAGTC	7 cut(s)	55, 75, 242, 338, 629, 798, 1249
PluTI	GGCGCC	1 cut(s)	338
PpsI	GAGTC	7 cut(s)	55, 75, 242, 338, 629, 798, 1249
PpuMI	RGGWCCY	2 cut(s)	46, 69
Psp5II	RGGWCCY	2 cut(s)	46, 69
Psp6I	CCWGG	4 cut(s)	134, 967, 1077, 1371
PspFI	CCCAGC	1 cut(s)	1023
PspGI	CCWGG	4 cut(s)	134, 967, 1077, 1371
PspN4I	GGNNCC	7 cut(s)	47, 71, 133, 336, 376, 643, 966
PspPI	GGNCC	9 cut(s)	46, 69, 118, 131, 147, 552, 642, 814, 1220
PspPPI	RGGWCCY	2 cut(s)	46, 69
PsuI	RGATCY	1 cut(s)	1054
PvuII	CAGCTG	1 cut(s)	437
RsaI	GTAC	1 cut(s)	401
RsaNI	GTAC	1 cut(s)	400
SalI	GTCGAC	1 cut(s)	58
SaqAI	TTAA	2 cut(s)	765, 1140
SatI	GCNGC	7 cut(s)	37, 170, 210, 338, 1116, 1208, 1322
Sau3AI	GATC	3 cut(s)	613, 931, 1054
Sau96I	GGNCC	9 cut(s)	46, 69, 118, 131, 147, 552, 642, 814, 1220
SchI	GAGTC	7 cut(s)	55, 75, 243, 338, 629, 799, 1250
SduI	GDGCHC	2 cut(s)	664, 967
SfaNI	GCATC	2 cut(s)	351, 1013
SfoI	GGCGCC	1 cut(s)	336
SinI	GGWCC	4 cut(s)	46, 69, 814, 1220
SmaI	CCCGGG	1 cut(s)	556
SrfI	GCCCGGGC	1 cut(s)	556
Sse9I	AATT	7 cut(s)	259, 289, 529, 670, 918, 1141, 1156
SsiI	CCGC	9 cut(s)	207, 210, 298, 309, 324, 338, 688, 1075, 1285
SspDI	GGCGCC	1 cut(s)	334
SspMI	CTAG	3 cut(s)	989, 1052, 1124
TaaI	ACNGT	3 cut(s)	467, 538, 698
TaiI	ACGT	2 cut(s)	57, 667
TaqI	TCGA	4 cut(s)	51, 59, 75, 159
TasI	AATT	7 cut(s)	259, 289, 529, 670, 918, 1141, 1156
TauI	GCSGC	2 cut(s)	212, 340
TfiI	GAWTC	1 cut(s)	274
Tru1I	TTAA	2 cut(s)	765, 1140
Tru9I	TTAA	2 cut(s)	765, 1140
TscAI	CASTG	1 cut(s)	543
TseFI	GTSAC	3 cut(s)	606, 745, 912
TseI	GCWGC	5 cut(s)	36, 169, 1115, 1207, 1321
Tsp45I	GTSAC	3 cut(s)	606, 745, 912
TspDTI	ATGAA	4 cut(s)	23, 154, 166, 1058
TspGWI	ACGGA	1 cut(s)	93
TspMI	CCCGGG	1 cut(s)	554
TspRI	CASTG	1 cut(s)	543
VneI	GTGCAC	1 cut(s)	660
VpaK11BI	GGWCC	4 cut(s)	46, 69, 814, 1220
XapI	RAATTY	1 cut(s)	1156
XmaI	CCCGGG	1 cut(s)	554
XmiI	GTMKAC	1 cut(s)	59
XmnI	GAANNNNTTC	1 cut(s)	1167
XspI	CTAG	3 cut(s)	989, 1052, 1124
Zsp2I	ATGCAT	1 cut(s)	1382

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.