Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr13

Orthogroup ID

OG0009955

Physical Location & Seq

Genomic Coordinates Forward (+)

14528559 .. 14534618

Gene Structure 6060 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

MD13G1175800.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2448 bp

ATGGAAAGGCCGCCCTCTCTCCCTCCAACGCAACCGCGACGGCACCGTTTAGACCAACCACCTGGAGTTTCACACATGGAAATTCAACCGCCGCTGCCCTCCGACGAAACCTCCACAGTCTGGGATTGGGGAGATCTCTTGGATTTCACCGTCGACGACGACTTGTCCATCTCCTGGGGCTCCGCCGAGAATCCGGACCCCGAGGTCGGCCCGGCCCCGGAAGACCCGCCGGAGGATCCGAATTCCAATTCGAGTCGGATAAGGAAGCGGGACCCGAGGCTGGCTTGCTCCAACTTCTTGGCGGGTCATATCCCCTGTGCGTGCCCCGAGGTCGACGCGAGGATGATGGAGCTAGAAGAGGAGGAAGCCGGGCACGGGAAGAAGCGGGTTAAGACTGGTCGGGCTACACCCGGGACGGCGCGGTGTCAGGTCCCGTCTTGCGGCATCGATATCAAGGAGCTGAAGGGGTATCATCGGAGGCACAGAGTGTGCCTTGCGTGTGCAAATGCGATCACTGTCGTTATCGACGGTGAGACCAAGCGTTATTGTCAGCAGTGTGGCAAGTTCCATGTCTTACCAGACTTTGATGAAGGTAAGCGAAGTTGTCGAAGAAAATTAGAGCGTCATAATAACAGACGGCGAAGGAAACCTAGTGATTCTAAAGGAGCAAGTGGAAAGGAATCACAAAAGGAAAATCAAACTGAAGAGACCAATTTTGATGGTGGAGCAACAGAAGACAGTCTACAGTTAAGTAGCCAGCTGAATGAGAAGGAAGAATTGCTGGTGTCTGAAGGTGGGCGAACTCCTATCCTCTGTTCAGTGCCTGAATCCCAGAATGCCCATAGTGACAGTGTTGTATCAGTTATGGCTTCTGGTGAAACCCAAAAGGATGCAAGAAAACATGATTCTAACAACTCTCTTTCTCCGCCTAATTGCGACAACAAAAGCTACTCATCTATGTGTCCGACAGGTCGTATATCATTCAAGCTCTACGATTGGAATCCAGCAGAATTTCCTAGAAGACTTCGGCACCAAATCTTCCAATGGTTGGCCAATATGCCGGTTGAGTTGGAGGGATATATCCGCCCTGGATGTACTATCTTGACTATTTTTATTGCAATGCCTAAGTTTATGTGGATGAAGTTGCTTGAAGATCCTGTATCATACATACATGAGTTTGTTTCTGTACCTGGGAAAATGCTATCCGGGAGAGGCAATATACTTATTTATCTAAACGACATGATTTTCCGTATTGTAAAAGATGGGACTTCTGTAATAAAAACAAAAGTGGAGGTGCAGGCCCCAAGGCTTCATTACGTTCATCCTACATTTTTTGAGGCTGGCAAACCCATGGAGTTTGTTGCCTGTGGAAGTAATTTATTACAACCCAAATTTCGATTTCTGGTATCCTTCTCTGGAAAGTATCTGGCCTATAACTATTCTCCTCCATCTTCTCATAGTCGGATTGAAGGGGACACTGCTAGTAATTTAGACCATCAATTGTGCAAGATACAGGTCCCTCAAACTGACGCAGATTGTTTTGGTCCAGCATTTATTGAGATTGAGAATGAATCTGGCTTATCCAACTTTATGCCAGTACTCATTGGGGACAAAGAGGTTTGTGCAGAAATGAAGACTATTCAGAAGAGATATGAAGAATCTTTCTCTTCGCAAGGATTACGCTTTTCTTTCACCGGTTCTCTTTCAAACTCTTGTGAAGCATCTTCACTGAGGCACACAGCATTTTCTGAAGTTATTTTAGATATAGCATGGTTATTAAAAAAGCCCTCGTCAGAAAACTTTCAACAGATCATAACTGCTTCACAGATTCAAAGATTCAACTATCTATTGAACTTTTTGATATCCATCAAGTCAACAACCATATTGGACAAAGTTTTACAAAATCTGGAGACTCTGATGGCTAAAATGGAGTTGAACAGTGCAAATAATGGCAGCATTGATGCAGATATGAGGCTATTACAGAATTACATGAATTATGCCCGTGATCTTCTTTGTCAAAAATTCGAAAGCTCTGGAAGGTTGGTGAAAAAAGAGGATCTTGTCTCTCAAAGTCAAACCTGCTTTCAGAATGATGGAAAATTGGTTGCTCCATTCCACTGTCAGGATACGGAGATAACTGTAGACGGTAGGCTGGGTGTGATTGTGGGTTCAACTTTTGACGAGAGAAGTGAAACTGTTCCGCTTTTGAGTAAAAAAGCAGTCGGTAAAGCTAACCTCATCAAGGAATTGCCTAGTTTGGCTAAGCGTTGCACTTCTGGGGAGGTCTTATGGTCTCGCTCTGGTGGGATGTTCTTGAGATTTCGCCCTACGCTTCTCGTAATTTCTGCTACAGCTATCTGTGTAGGATTTTGTGCGGTCCTCATCCATCCTCACAAGGTTGGCGAGTTTGCAGTAACGATACGCAGATGTTTATTTGACAAATTTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0006355 GO:0006950 GO:0007154 GO:0008150 GO:0009267 GO:0009605 GO:0009889 GO:0009987 GO:0009991 GO:0010468 GO:0010556 GO:0016604 GO:0016607 GO:0019219 GO:0019222 GO:0031323 GO:0031326 GO:0031667 GO:0031668 GO:0031669 GO:0031974 GO:0031981 GO:0033554 GO:0035874 GO:0040008 GO:0042594 GO:0042802 GO:0042803 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044451 GO:0044464 GO:0046983 GO:0048638 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051171 GO:0051252 GO:0051716 GO:0060255 GO:0065007 GO:0070013 GO:0071496 GO:0080090 GO:0120126 GO:1903506 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

SBP

Protein Analysis

816

Amino Acids

91.34

Weight (kDa)

6.85

Isoelectric Point (pI)

54.82

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
SBP	PF03110	142 - 216	1e-27	SBP domain
Ig_SPL7	PF26102	431 - 546	2.5e-38	SPL7-like, immunoglobulin-like domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009955)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G18830 AT5G18830 AT5G18830
fragaria_vesca	FvH4_4g16910 FvH4_4g16910 FvH4_4g16910 FvH4_4g16910
malus_domestica	MD13G1175800.v1.1 MD16G1177600.v1.1
prunus_persica	Prupe.1G144600_v2.0.a1
pyrus_communis	pycom13g15150 pycom16g14900
rosa_chinensis	RchiOBHm_Chr4g0420491
rosa_laevigata	RLG00000007757
rosa_roxburghii	Rroxscaffold_5G00363110
rosa_rugosa	Rorug04G0164300
rosa_samantha	Rh4AG225900 Rh4BG228600 Rh4CG240200 Rh4DG224300
rosa_wichuraiana	Rw4G019500

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	203
Acc36I	ACCTGC	1 cut(s)	2087
AccB1I	GGYRCC	2 cut(s)	42, 1029
AccB7I	CCANNNNNTGG	3 cut(s)	120, 174, 1048
AccI	GTMKAC	4 cut(s)	153, 333, 742, 2142
AccII	CGCG	3 cut(s)	37, 338, 421
AccIII	TCCGGA	1 cut(s)	193
AclWI	GGATC	4 cut(s)	230, 243, 1148, 2064
AcoI	YGGCCR	1 cut(s)	1050
AcsI	RAATTY	6 cut(s)	81, 241, 1010, 1391, 2021, 2441
AcuI	CTGAAG	4 cut(s)	482, 723, 810, 1770
AdeI	CACNNNGTG	1 cut(s)	487
AfaI	GTAC	3 cut(s)	1096, 1188, 1599
AgeI	ACCGGT	1 cut(s)	1694
AhdI	GACNNNNNGTC	1 cut(s)	163
AjnI	CCWGG	4 cut(s)	61, 173, 1087, 1189
AluBI	AGCT	8 cut(s)	352, 460, 760, 948, 988, 2031, 2231, 2354
AluI	AGCT	8 cut(s)	352, 460, 760, 948, 988, 2031, 2231, 2354
Alw26I	GTCTC	5 cut(s)	527, 701, 1904, 2068, 2298
AlwI	GGATC	4 cut(s)	230, 243, 1148, 2064
AlwNI	CAGNNNCTG	1 cut(s)	824
Ama87I	CYCGRG	4 cut(s)	200, 274, 326, 410
Aor13HI	TCCGGA	1 cut(s)	193
AoxI	GGCC	6 cut(s)	8, 208, 213, 1050, 1299, 1428
ApeKI	GCWGC	2 cut(s)	94, 1953
ApoI	RAATTY	6 cut(s)	81, 241, 1010, 1391, 2021, 2441
AsiGI	ACCGGT	1 cut(s)	1694
Asp700I	GAANNNNTTC	2 cut(s)	1800, 2196
AspLEI	GCGC	1 cut(s)	421
AspS9I	GGNCC	9 cut(s)	196, 209, 214, 271, 430, 1300, 1516, 1544, 2377
AsuC2I	CCSGG	6 cut(s)	212, 218, 370, 411, 412, 1207
AsuHPI	GGTGA	5 cut(s)	139, 542, 887, 1684, 2056
AsuII	TTCGAA	1 cut(s)	2025
AvaI	CYCGRG	4 cut(s)	200, 274, 326, 410
AvaII	GGWCC	6 cut(s)	196, 271, 430, 1516, 1544, 2377
BaeGI	GKGCMC	2 cut(s)	326, 375
BalI	TGGCCA	1 cut(s)	1052
BamHI	GGATCC	1 cut(s)	235
BanI	GGYRCC	2 cut(s)	42, 1029
BanII	GRGCYC	1 cut(s)	182
BarI	GAAGNNNNNNTAC	2 cut(s)	726, 758
BbsI	GAAGAC	4 cut(s)	228, 741, 1027, 1640
BbvI	GCAGC	2 cut(s)	81, 1965
BceAI	ACGGC	3 cut(s)	56, 432, 653
BciT130I	CCWGG	4 cut(s)	63, 175, 1089, 1191
BciVI	GTATCC	2 cut(s)	1417, 2119
BcnI	CCSGG	6 cut(s)	212, 218, 370, 411, 412, 1207
BcoDI	GTCTC	5 cut(s)	527, 701, 1904, 2068, 2298
BfaI	CTAG	5 cut(s)	353, 651, 1017, 1482, 2253
BfmI	CTRYAG	3 cut(s)	743, 2139, 2349
BfuAI	ACCTGC	1 cut(s)	2087
BfuI	GTATCC	2 cut(s)	1417, 2119
BglII	AGATCT	1 cut(s)	133
BisI	GCNGC	5 cut(s)	11, 92, 95, 442, 1954
BlpI	GCTNAGC	1 cut(s)	2262
BlsI	GCNGC	5 cut(s)	12, 93, 96, 443, 1955
BmcAI	AGTACT	1 cut(s)	1599
Bme18I	GGWCC	6 cut(s)	196, 271, 430, 1516, 1544, 2377
BmeRI	GACNNNNNGTC	1 cut(s)	163
BmeT110I	CYCGRG	4 cut(s)	200, 274, 326, 410
BmgT120I	GGNCC	9 cut(s)	196, 209, 214, 271, 430, 1300, 1516, 1544, 2377
BmsI	GCATC	4 cut(s)	453, 880, 1730, 1951
BpiI	GAAGAC	4 cut(s)	228, 741, 1027, 1640
BpmI	CTGGAG	2 cut(s)	84, 1928
Bpu1102I	GCTNAGC	1 cut(s)	2262
Bpu14I	TTCGAA	1 cut(s)	2025
BpuEI	CTTGAG	1 cut(s)	2335
BpuMI	CCSGG	6 cut(s)	212, 218, 370, 411, 412, 1207
Bsa29I	ATCGAT	1 cut(s)	447
BsaBI	GATNNNNATC	2 cut(s)	999, 1865
BsaI	GGTCTC	3 cut(s)	527, 701, 2298
BsaWI	WCCGGW	2 cut(s)	193, 1694
BsaXI	ACNNNNNCTCC	2 cut(s)	95, 125
Bse118I	RCCGGY	2 cut(s)	1060, 1694
Bse1I	ACTGG	2 cut(s)	400, 1595
Bse3DI	GCAATG	1 cut(s)	1125
Bse8I	GATNNNNATC	2 cut(s)	999, 1865
BseAI	TCCGGA	1 cut(s)	193
BseBI	CCWGG	4 cut(s)	63, 175, 1089, 1191
BseCI	ATCGAT	1 cut(s)	447
BseGI	GGATG	8 cut(s)	348, 895, 1097, 1143, 1321, 2313, 2382, 2386
BseJI	GATNNNNATC	2 cut(s)	999, 1865
BseMI	GCAATG	1 cut(s)	1125
BseMII	CTCAG	1 cut(s)	1721
BseNI	ACTGG	2 cut(s)	400, 1595
BseRI	GAGGAG	2 cut(s)	374, 1434
BseSI	GKGCMC	2 cut(s)	326, 375
BseXI	GCAGC	2 cut(s)	81, 1965
BseYI	CCCAGC	1 cut(s)	2152
BsgI	GTGCAG	2 cut(s)	1316, 1644
Bsh1236I	CGCG	3 cut(s)	37, 338, 421
BshFI	GGCC	6 cut(s)	10, 210, 215, 1052, 1301, 1430
BshNI	GGYRCC	2 cut(s)	42, 1029
BshTI	ACCGGT	1 cut(s)	1694
BshVI	ATCGAT	1 cut(s)	447
BsiHKCI	CYCGRG	4 cut(s)	200, 274, 326, 410
BsiSI	CCGG	9 cut(s)	194, 212, 218, 230, 369, 411, 1061, 1206, 1695
BslFI	GGGAC	7 cut(s)	284, 416, 427, 1279, 1487, 1502, 1622
BsmAI	GTCTC	5 cut(s)	527, 701, 1904, 2068, 2298
BsmFI	GGGAC	7 cut(s)	284, 416, 427, 1279, 1487, 1502, 1622
BsmI	GAATGC	1 cut(s)	841
BsnI	GGCC	6 cut(s)	10, 210, 215, 1052, 1301, 1430
Bso31I	GGTCTC	3 cut(s)	527, 701, 2298
BsoBI	CYCGRG	4 cut(s)	200, 274, 326, 410
Bsp119I	TTCGAA	1 cut(s)	2025
Bsp1286I	GDGCHC	3 cut(s)	182, 326, 375
Bsp13I	TCCGGA	1 cut(s)	193
Bsp143I	GATC	7 cut(s)	133, 235, 510, 1153, 1809, 2005, 2056
Bsp1720I	GCTNAGC	1 cut(s)	2262
Bsp19I	CCATGG	1 cut(s)	1350
BspANI	GGCC	6 cut(s)	10, 210, 215, 1052, 1301, 1430
BspCNI	CTCAG	1 cut(s)	1722
BspDI	ATCGAT	1 cut(s)	447
BspEI	TCCGGA	1 cut(s)	193
BspFNI	CGCG	3 cut(s)	37, 338, 421
BspMI	ACCTGC	1 cut(s)	2087
BspPI	GGATC	4 cut(s)	230, 243, 1148, 2064
BspT104I	TTCGAA	1 cut(s)	2025
BspT107I	GGYRCC	2 cut(s)	42, 1029
BspTNI	GGTCTC	3 cut(s)	527, 701, 2298
BsrDI	GCAATG	1 cut(s)	1125
BsrFI	RCCGGY	2 cut(s)	1060, 1694
BsrI	ACTGG	2 cut(s)	400, 1595
BssAI	RCCGGY	2 cut(s)	1060, 1694
BssMI	GATC	7 cut(s)	133, 235, 510, 1153, 1809, 2005, 2056
BssT1I	CCWWGG	2 cut(s)	1304, 1350
Bst2UI	CCWGG	4 cut(s)	63, 175, 1089, 1191
Bst6I	CTCTTC	4 cut(s)	351, 699, 1640, 1672
BstBI	TTCGAA	1 cut(s)	2025
BstC8I	GCNNGC	6 cut(s)	282, 286, 322, 758, 1299, 1342
BstDEI	CTNAG	3 cut(s)	1125, 1730, 2262
BstDSI	CCRYGG	1 cut(s)	1350
BstENI	CCTNNNNNAGG	1 cut(s)	2240
BstF5I	GGATG	8 cut(s)	348, 895, 1097, 1143, 1321, 2313, 2382, 2386
BstFNI	CGCG	3 cut(s)	37, 338, 421
BstHHI	GCGC	1 cut(s)	421
BstKTI	GATC	7 cut(s)	136, 238, 513, 1156, 1812, 2008, 2059
BstMAI	GTCTC	5 cut(s)	527, 701, 1904, 2068, 2298
BstMBI	GATC	7 cut(s)	133, 235, 510, 1153, 1809, 2005, 2056
BstNI	CCWGG	4 cut(s)	63, 175, 1089, 1191
BstSFI	CTRYAG	3 cut(s)	743, 2139, 2349
BstSLI	GKGCMC	2 cut(s)	326, 375
BstUI	CGCG	3 cut(s)	37, 338, 421
BstV1I	GCAGC	2 cut(s)	81, 1965
BstV2I	GAAGAC	4 cut(s)	228, 741, 1027, 1640
BstX2I	RGATCY	4 cut(s)	133, 235, 1153, 2056
BstXI	CCANNNNNNTGG	2 cut(s)	62, 298
BstYI	RGATCY	4 cut(s)	133, 235, 1153, 2056
Bsu15I	ATCGAT	1 cut(s)	447
BsuI	GTATCC	2 cut(s)	1417, 2119
BsuRI	GGCC	6 cut(s)	10, 210, 215, 1052, 1301, 1430
BsuTUI	ATCGAT	1 cut(s)	447
BtgI	CCRYGG	1 cut(s)	1350
BtsCI	GGATG	8 cut(s)	348, 895, 1097, 1143, 1321, 2313, 2382, 2386
BtsI	GCAGTG	2 cut(s)	560, 1476
BtsIMutI	CAGTG	8 cut(s)	513, 560, 825, 856, 1476, 1727, 1945, 2116
BveI	ACCTGC	1 cut(s)	2087
Cac8I	GCNNGC	6 cut(s)	282, 286, 322, 758, 1299, 1342
CaiI	CAGNNNCTG	1 cut(s)	824
CfoI	GCGC	1 cut(s)	421
Cfr10I	RCCGGY	2 cut(s)	1060, 1694
Cfr13I	GGNCC	9 cut(s)	196, 209, 214, 271, 430, 1300, 1516, 1544, 2377
Cfr9I	CCCGGG	1 cut(s)	410
ClaI	ATCGAT	1 cut(s)	447
CseI	GACGC	3 cut(s)	344, 611, 1538
Csp6I	GTAC	3 cut(s)	1095, 1187, 1598
CspAI	ACCGGT	1 cut(s)	1694
CviAII	CATG	8 cut(s)	76, 569, 902, 1172, 1240, 1351, 1770, 1990
CviQI	GTAC	3 cut(s)	1095, 1187, 1598
DdeI	CTNAG	3 cut(s)	1125, 1730, 2262
DpnI	GATC	7 cut(s)	135, 237, 512, 1155, 1811, 2007, 2058
DpnII	GATC	7 cut(s)	133, 235, 510, 1153, 1809, 2005, 2056
DraIII	CACNNNGTG	1 cut(s)	487
DrdI	GACNNNNNNGTC	1 cut(s)	203
DriI	GACNNNNNGTC	1 cut(s)	163
DseDI	GACNNNNNNGTC	1 cut(s)	203
EaeI	YGGCCR	1 cut(s)	1050
Eam1104I	CTCTTC	4 cut(s)	351, 699, 1640, 1672
Eam1105I	GACNNNNNGTC	1 cut(s)	163
EarI	CTCTTC	4 cut(s)	351, 699, 1640, 1672
EciI	GGCGGA	3 cut(s)	172, 915, 1073
Eco130I	CCWWGG	2 cut(s)	1304, 1350
Eco24I	GRGCYC	1 cut(s)	182
Eco31I	GGTCTC	3 cut(s)	527, 701, 2298
Eco32I	GATATC	2 cut(s)	451, 1863
Eco47I	GGWCC	6 cut(s)	196, 271, 430, 1516, 1544, 2377
Eco57I	CTGAAG	4 cut(s)	482, 723, 810, 1770
Eco88I	CYCGRG	4 cut(s)	200, 274, 326, 410
EcoNI	CCTNNNNNAGG	1 cut(s)	2240
EcoO109I	RGGNCCY	4 cut(s)	271, 430, 1300, 1516
EcoRI	GAATTC	1 cut(s)	241
EcoRII	CCWGG	4 cut(s)	61, 173, 1087, 1189
EcoRV	GATATC	2 cut(s)	451, 1863
EcoT14I	CCWWGG	2 cut(s)	1304, 1350
EcoT38I	GRGCYC	1 cut(s)	182
ErhI	CCWWGG	2 cut(s)	1304, 1350
FaeI	CATG	8 cut(s)	79, 572, 905, 1175, 1243, 1354, 1773, 1993
FalI	AAGNNNNNCTT	2 cut(s)	2043, 2075
FaqI	GGGAC	7 cut(s)	284, 416, 427, 1279, 1487, 1502, 1622
FatI	CATG	8 cut(s)	75, 568, 901, 1171, 1239, 1350, 1769, 1989
FauI	CCCGC	4 cut(s)	234, 261, 295, 378
FblI	GTMKAC	4 cut(s)	153, 333, 742, 2142
Fnu4HI	GCNGC	5 cut(s)	11, 92, 95, 442, 1954
FokI	GGATG	8 cut(s)	355, 902, 1104, 1150, 1308, 2320, 2369, 2373
FriOI	GRGCYC	1 cut(s)	182
Fsp4HI	GCNGC	5 cut(s)	11, 92, 95, 442, 1954
FspBI	CTAG	5 cut(s)	353, 651, 1017, 1482, 2253
GlaI	GCGC	1 cut(s)	420
GluI	GCNGC	5 cut(s)	11, 92, 95, 442, 1954
GsaI	CCCAGC	1 cut(s)	2156
GsuI	CTGGAG	2 cut(s)	84, 1928
HaeIII	GGCC	6 cut(s)	10, 210, 215, 1052, 1301, 1430
HapII	CCGG	9 cut(s)	194, 212, 218, 230, 369, 411, 1061, 1206, 1695
HgaI	GACGC	3 cut(s)	344, 611, 1538
HhaI	GCGC	1 cut(s)	421
Hin1II	CATG	8 cut(s)	79, 572, 905, 1175, 1243, 1354, 1773, 1993
Hin6I	GCGC	1 cut(s)	419
HinP1I	GCGC	1 cut(s)	419
HincII	GTYRAC	3 cut(s)	154, 334, 1875
HindII	GTYRAC	3 cut(s)	154, 334, 1875
HpaII	CCGG	9 cut(s)	194, 212, 218, 230, 369, 411, 1061, 1206, 1695
HphI	GGTGA	5 cut(s)	139, 542, 887, 1684, 2056
Hpy166II	GTNNAC	5 cut(s)	154, 334, 743, 1875, 2143
Hpy188III	TCNNGA	7 cut(s)	194, 1102, 1416, 1907, 2034, 2123, 2314
Hpy8I	GTNNAC	5 cut(s)	154, 334, 743, 1875, 2143
Hpy99I	CGWCG	7 cut(s)	42, 107, 155, 158, 161, 338, 530
HpyAV	CCTTC	8 cut(s)	457, 584, 636, 763, 785, 1420, 1463, 2031
HpyCH4IV	ACGT	1 cut(s)	1317
HpyF3I	CTNAG	3 cut(s)	1125, 1730, 2262
HpySE526I	ACGT	1 cut(s)	1317
Hsp92II	CATG	8 cut(s)	79, 572, 905, 1175, 1243, 1354, 1773, 1993
HspAI	GCGC	1 cut(s)	419
KflI	GGGWCCC	1 cut(s)	271
Kpn2I	TCCGGA	1 cut(s)	193
Kzo9I	GATC	7 cut(s)	133, 235, 510, 1153, 1809, 2005, 2056
LmnI	GCTCC	7 cut(s)	185, 293, 349, 457, 665, 725, 2113
Lsp1109I	GCAGC	2 cut(s)	81, 1965
LweI	GCATC	4 cut(s)	453, 880, 1730, 1951
MaeI	CTAG	5 cut(s)	353, 651, 1017, 1482, 2253
MaeII	ACGT	1 cut(s)	1317
MaeIII	GTNAC	2 cut(s)	845, 2413
MalI	GATC	7 cut(s)	135, 237, 512, 1155, 1811, 2007, 2058
MboI	GATC	7 cut(s)	133, 235, 510, 1153, 1809, 2005, 2056
MfeI	CAATTG	1 cut(s)	1499
MflI	RGATCY	4 cut(s)	133, 235, 1153, 2056
MhlI	GDGCHC	3 cut(s)	182, 326, 375
MlsI	TGGCCA	1 cut(s)	1052
MluNI	TGGCCA	1 cut(s)	1052
MlyI	GAGTC	2 cut(s)	262, 1906
MmeI	TCCRAC	8 cut(s)	50, 126, 236, 315, 989, 1050, 1442, 1608
Mox20I	TGGCCA	1 cut(s)	1052
MroI	TCCGGA	1 cut(s)	193
MroXI	GAANNNNTTC	2 cut(s)	1800, 2196
MscI	TGGCCA	1 cut(s)	1052
MseI	TTAA	3 cut(s)	390, 749, 1778
MslI	CAYNNNNRTG	1 cut(s)	958
Msp20I	TGGCCA	1 cut(s)	1052
MspA1I	CMGCKG	2 cut(s)	94, 760
MspI	CCGG	9 cut(s)	194, 212, 218, 230, 369, 411, 1061, 1206, 1695
MunI	CAATTG	1 cut(s)	1499
Mva1269I	GAATGC	1 cut(s)	841
MvaI	CCWGG	4 cut(s)	63, 175, 1089, 1191
MvnI	CGCG	3 cut(s)	37, 338, 421
NciI	CCSGG	6 cut(s)	212, 218, 370, 411, 412, 1207
NcoI	CCATGG	1 cut(s)	1350
NdeII	GATC	7 cut(s)	133, 235, 510, 1153, 1809, 2005, 2056
NlaIII	CATG	8 cut(s)	79, 572, 905, 1175, 1243, 1354, 1773, 1993
NmeAIII	GCCGAG	1 cut(s)	211
NmuCI	GTSAC	1 cut(s)	845
NspV	TTCGAA	1 cut(s)	2025
PctI	GAATGC	1 cut(s)	841
PdmI	GAANNNNTTC	2 cut(s)	1800, 2196
PflMI	CCANNNNNTGG	3 cut(s)	120, 174, 1048
PfoI	TCCNGGA	1 cut(s)	1205
PinAI	ACCGGT	1 cut(s)	1694
PkrI	GCNGC	5 cut(s)	12, 93, 96, 443, 1955
PleI	GAGTC	2 cut(s)	261, 1906
PpsI	GAGTC	2 cut(s)	261, 1906
PpuMI	RGGWCCY	3 cut(s)	271, 430, 1516
Psp5II	RGGWCCY	3 cut(s)	271, 430, 1516
Psp6I	CCWGG	4 cut(s)	61, 173, 1087, 1189
PspFI	CCCAGC	1 cut(s)	2152
PspGI	CCWGG	4 cut(s)	61, 173, 1087, 1189
PspPI	GGNCC	9 cut(s)	196, 209, 214, 271, 430, 1300, 1516, 1544, 2377
PspPPI	RGGWCCY	3 cut(s)	271, 430, 1516
PstNI	CAGNNNCTG	1 cut(s)	824
PsuI	RGATCY	4 cut(s)	133, 235, 1153, 2056
PvuII	CAGCTG	1 cut(s)	760
RsaI	GTAC	3 cut(s)	1096, 1188, 1599
RsaNI	GTAC	3 cut(s)	1095, 1187, 1598
RseI	CAYNNNNRTG	1 cut(s)	958
SalI	GTCGAC	2 cut(s)	152, 332
SaqAI	TTAA	3 cut(s)	390, 749, 1778
SatI	GCNGC	5 cut(s)	11, 92, 95, 442, 1954
Sau3AI	GATC	7 cut(s)	133, 235, 510, 1153, 1809, 2005, 2056
Sau96I	GGNCC	9 cut(s)	196, 209, 214, 271, 430, 1300, 1516, 1544, 2377
ScaI	AGTACT	1 cut(s)	1599
SchI	GAGTC	2 cut(s)	262, 1906
SduI	GDGCHC	3 cut(s)	182, 326, 375
SfaNI	GCATC	4 cut(s)	453, 880, 1730, 1951
SfcI	CTRYAG	3 cut(s)	743, 2139, 2349
SfuI	TTCGAA	1 cut(s)	2025
SgrDI	CGTCGACG	1 cut(s)	152
SinI	GGWCC	6 cut(s)	196, 271, 430, 1516, 1544, 2377
SmaI	CCCGGG	1 cut(s)	412
SmiMI	CAYNNNNRTG	1 cut(s)	958
SmlI	CTYRAG	1 cut(s)	2314
SmoI	CTYRAG	1 cut(s)	2314
SspMI	CTAG	5 cut(s)	353, 651, 1017, 1482, 2253
StyI	CCWWGG	2 cut(s)	1304, 1350
TaiI	ACGT	1 cut(s)	1320
TaqI	TCGA	8 cut(s)	153, 251, 333, 447, 525, 607, 1396, 2025
TatI	WGTACW	2 cut(s)	1094, 1597
TauI	GCSGC	3 cut(s)	13, 94, 444
Tru1I	TTAA	3 cut(s)	390, 749, 1778
Tru9I	TTAA	3 cut(s)	390, 749, 1778
TscAI	CASTG	8 cut(s)	520, 560, 825, 856, 1483, 1734, 1945, 2123
TseFI	GTSAC	1 cut(s)	845
TseI	GCWGC	2 cut(s)	94, 1953
Tsp45I	GTSAC	1 cut(s)	845
TspDTI	ATGAA	8 cut(s)	603, 1154, 1301, 1310, 1584, 1646, 1668, 2006
TspGWI	ACGGA	2 cut(s)	1238, 2144
TspMI	CCCGGG	1 cut(s)	410
TspRI	CASTG	8 cut(s)	520, 560, 825, 856, 1483, 1734, 1945, 2123
Van91I	CCANNNNNTGG	3 cut(s)	120, 174, 1048
VpaK11BI	GGWCC	6 cut(s)	196, 271, 430, 1516, 1544, 2377
XagI	CCTNNNNNAGG	1 cut(s)	2240
XapI	RAATTY	6 cut(s)	81, 241, 1010, 1391, 2021, 2441
XmaI	CCCGGG	1 cut(s)	410
XmiI	GTMKAC	4 cut(s)	153, 333, 742, 2142
XmnI	GAANNNNTTC	2 cut(s)	1800, 2196
XspI	CTAG	5 cut(s)	353, 651, 1017, 1482, 2253
ZrmI	AGTACT	1 cut(s)	1599

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.