Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0009955

Physical Location & Seq

Genomic Coordinates Reverse (-)

46273081 .. 46280285

Gene Structure 7205 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ39023

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2469 bp

ATGCAAAAGTCCCCCCCTCTTTCCCCAACCCAATCACAACGGCAGCGGTTAGACCAACCTAGGGTTTCTCACATTCCTCAACCGCCCATGGCCGCCGGCGACACTTCATCTGTCTGGGACTGGGGCGATCTCCTCGACTTCACCGTCGACGACGACTTGGCCATCTCATGGGCCTCCGCCGACCCGCCCAACCCGCCCGAGTCCCACCACCTTCCCCCGCCGGACGACCCGCCGGAGAATCCGAATCCGAGCGCGGCGCCGGCGGCAAGGATAAGGAAGCGCGACCCGAGGCTGGCGTGCTCCAACTTTCTGGCGGGTCACGTGCCGTGCGCGTGCCCGGAGGTGGACGAGAAAATGATGGAACTGGAGGAGGAGGAAGCCGGGCACGGGAAGAAGCGGGTCAGGACGGTTCGGGCCCCGCCCGGGACGGCCCGGTGTCAGGTCCCGACTTGTGGGGCCGACATTAAGGAGCTCAAAGGCTATCACCGCAGGCACAGAGTCTGCCTTGCCTGCGCCAATGCCACCACCGTCGTCCTCGGCGGCGAGACCAAGCGTTATTGTCAGCAGTGTGGCAAGTTCCATGTCTTATCTGATTTTGATGAAGGTAAGCGGAGCTGTCGAAGAAAATTAGAGCGTCACAATAACAGAAGAAGAAGAAAACCGAGTGATTCAAAAGCAGGGAAGGAATCTCAAAGGGAAGTTCAAACTGAAGGTGGCAATCATGATGGTGAAGCAGGAGAAGACAGTTTACAGTTAAGCAGCCAGATAAATGAGAAGGAAGACTTGGTGGAGTCAGAAGGTGGGGGTATTTCTACCCTCTTTTCAATGCCTAATTCCCAGAATGTCGGCAGTGATGGTGTTGCATCGGCCCTGACTTCTGGTGATACCCAAATGGATGGAGGAAAACATGATTCCAATCACTCTCTTTCTCCGCCACAGTGCGACAACAAAAGTGTCTACTCATCTATGTGTCCGACAGGTCGTATCTCATTCAAGCTCTATGATTGGAATCCAGCAGAATTCCCTAGAAGACTTCGGCACCAAATATTCCAATGGTTGGCTAGTATGCCGGTTGAGTTGGAGGGGTATATCCGTCCTGGATGTATTATCTTGACTGTTTTTATTGCAATGCCAAAGTTTATGTGGATGAAGTTACTTGATGATCCTGCATCGTATCTACATAACTTTGTTATCGTACCTGGAAGGATGCTATCGGGGAGGGGAAATATGCTTGTTTATCTCAATGACATGATTTTCCGTGTTGTAAAAGACGGGACTTCTGTAATAAAAGCCAAAGTGGAGGTGCGGGCCCCTAGGCTACATTATATTCATCCTACATGTTTTGAAGCAGGCAAGCCAATGGAGTTTTTTGTCTGTGGAAGTAATTTGTTACAACCCAAACTTAGGTTTCTTGTATCCTTCTCTGGAAAGTATCTGGCCGATAATTATGACCTGGAATCCTCTCATACTCAGATTGAAGGGGACAGCACTGCTGCTAATATAGATCATCAACTTTACAAGATACATGTGCCTCATACAGAAGCAACTAGTTTTGGTCCTGCGTTTATTGAGGTTGAAAATGAATCTGGGTTATCAAACTTTTTACCTGTACTCATTGGGAACAAAGAGATTTGTGCTGAAATGGAGAGTATTCAAAAAAGATTAGAAGAATCTCTTTTTGTGCGAGGATCATCAGACGTTTCTTCCAGTGGTTCTCTGTTGACCTCTTGTGAAGCATCTTCACTCAGACACAGAGCATTTTCTGAAGTTATTTTAGATATAGCATGGCTTCTTAGAAAGCCCTCCTCAGAAAATGTCCAACAGATCATGACTTCTTCACAGGCACAAAGATTCAATAATTTATTGAACTTATTGATATTCTTCAAGTCAACAACCATACTGGAGAAAGTGTTAGAAAATCTGAACACTCTGATGGATAATGTAGAGATAAACAACCCCGATAGTGGCAGTATTGATGCTGATATGAGGCTATTACAAAAGTACATGGATTGTGCTCGTGATATTCTTAGTCAAAAACTTCAAAGTTCTGGGGTTTCAGTTGTGGAGCCTGGAAGCTTGGTGCAGAAACAGGATCTTATTTCTCAAAGTCTAAGCCGCTTTCAGAGCAAACAACATTTTCTCATACACACTCAGGATACAGAGATTATTGTAGATGGTAAGATGGATGCGATGTTGGGTTCAACGTCTAATGAGAGAAGTGAGACTCTTCCACTTTTAAACAAAAAAGCAGCCACAAAAGCCAACCTTATCAAACAGGCTAACTGTGGTATTTCTTCTGGGGAGCTCCTAAGCTCTCGCTCTAGGCGAACATTCTTGGGATTTCGCTCCACTCTCTATGTAATTTCTGCCACTGCTATGTGTTTAGGAATTTGTGCGGTCGTCTTTCATCCTCATAAGGTTGGCGAATTAGCAGTAACAATACGCAGGTGTCTATTTGACAAGATTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0006355 GO:0006950 GO:0007154 GO:0008150 GO:0009267 GO:0009605 GO:0009889 GO:0009987 GO:0009991 GO:0010468 GO:0010556 GO:0016604 GO:0016607 GO:0019219 GO:0019222 GO:0031323 GO:0031326 GO:0031667 GO:0031668 GO:0031669 GO:0031974 GO:0031981 GO:0033554 GO:0035874 GO:0040008 GO:0042594 GO:0042802 GO:0042803 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044451 GO:0044464 GO:0046983 GO:0048638 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051171 GO:0051252 GO:0051716 GO:0060255 GO:0065007 GO:0070013 GO:0071496 GO:0080090 GO:0120126 GO:1903506 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

SBP

Protein Analysis

822

Amino Acids

91.28

Weight (kDa)

6.69

Isoelectric Point (pI)

54.67

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
SBP	PF03110	146 - 220	5.2e-28	SBP domain
Ig_SPL7	PF26102	434 - 549	2.6e-37	SPL7-like, immunoglobulin-like domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009955)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G18830 AT5G18830 AT5G18830
fragaria_vesca	FvH4_4g16910 FvH4_4g16910 FvH4_4g16910 FvH4_4g16910
malus_domestica	MD13G1175800.v1.1 MD16G1177600.v1.1
prunus_persica	Prupe.1G144600_v2.0.a1
pyrus_communis	pycom13g15150 pycom16g14900
rosa_chinensis	RchiOBHm_Chr4g0420491
rosa_laevigata	RLG00000007757
rosa_roxburghii	Rroxscaffold_5G00363110
rosa_rugosa	Rorug04G0164300
rosa_samantha	Rh4AG225900 Rh4BG228600 Rh4CG240200 Rh4DG224300
rosa_wichuraiana	Rw4G019500

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	2436
AasI	GACNNNNNNGTC	1 cut(s)	143
Acc36I	ACCTGC	1 cut(s)	2436
AccB1I	GGYRCC	2 cut(s)	256, 1038
AccB7I	CCANNNNNTGG	2 cut(s)	168, 1057
AccI	GTMKAC	2 cut(s)	147, 957
AccII	CGCG	3 cut(s)	254, 282, 332
AclWI	GGATC	3 cut(s)	1157, 1696, 2100
AcoI	YGGCCR	3 cut(s)	90, 159, 1437
AcsI	RAATTY	2 cut(s)	1019, 2388
AcuI	CTGAAG	2 cut(s)	729, 1785
AcvI	CACGTG	1 cut(s)	322
AcyI	GRCGYC	1 cut(s)	257
AfaI	GTAC	3 cut(s)	1197, 1611, 2003
AflIII	ACRYGT	2 cut(s)	1337, 1525
AhlI	ACTAGT	1 cut(s)	1547
AjnI	CCWGG	4 cut(s)	1096, 1198, 1452, 2068
AjuI	GAANNNNNNNTTGG	2 cut(s)	767, 799
AluBI	AGCT	6 cut(s)	472, 615, 997, 2076, 2305, 2313
AluI	AGCT	6 cut(s)	472, 615, 997, 2076, 2305, 2313
Alw21I	GWGCWC	4 cut(s)	302, 474, 2017, 2307
Alw26I	GTCTC	2 cut(s)	539, 2216
AlwI	GGATC	3 cut(s)	1157, 1696, 2100
AlwNI	CAGNNNCTG	1 cut(s)	501
Ama87I	CYCGRG	3 cut(s)	197, 286, 422
AoxI	GGCC	9 cut(s)	90, 159, 171, 414, 429, 456, 867, 1308, 1437
ApaI	GGGCCC	2 cut(s)	418, 1312
ApeKI	GCWGC	4 cut(s)	43, 759, 1493, 2249
ApoI	RAATTY	2 cut(s)	1019, 2388
AspA2I	CCTAGG	2 cut(s)	59, 1313
AspLEI	GCGC	5 cut(s)	254, 259, 282, 332, 515
AsuC2I	CCSGG	5 cut(s)	338, 382, 423, 424, 433
AsuHPI	GGTGA	4 cut(s)	133, 476, 740, 893
AvaI	CYCGRG	3 cut(s)	197, 286, 422
AvaII	GGWCC	2 cut(s)	442, 1556
AvrII	CCTAGG	2 cut(s)	59, 1313
BaeGI	GKGCMC	4 cut(s)	338, 387, 418, 1312
BalI	TGGCCA	1 cut(s)	161
BanI	GGYRCC	2 cut(s)	256, 1038
BanII	GRGCYC	4 cut(s)	418, 474, 1312, 2307
BarI	GAAGNNNNNNTAC	2 cut(s)	732, 764
BauI	CACGAG	1 cut(s)	2016
BbrPI	CACGTG	1 cut(s)	322
BbsI	GAAGAC	3 cut(s)	747, 786, 1036
Bbv12I	GWGCWC	4 cut(s)	302, 474, 2017, 2307
BbvI	GCAGC	4 cut(s)	55, 771, 1480, 2261
BccI	CCATC	8 cut(s)	170, 352, 719, 848, 890, 1927, 2168, 2176
BceAI	ACGGC	3 cut(s)	56, 310, 444
BciT130I	CCWGG	4 cut(s)	1098, 1200, 1454, 2070
BciVI	GTATCC	2 cut(s)	1426, 2149
BcnI	CCSGG	5 cut(s)	338, 382, 423, 424, 433
BcoDI	GTCTC	2 cut(s)	539, 2216
BcuI	ACTAGT	1 cut(s)	1547
BfaI	CTAG	6 cut(s)	60, 1026, 1062, 1314, 1548, 2322
BfoI	RGCGCY	1 cut(s)	260
BfuAI	ACCTGC	1 cut(s)	2436
BfuI	GTATCC	2 cut(s)	1426, 2149
BisI	GCNGC	9 cut(s)	44, 93, 255, 264, 541, 760, 1494, 2116, 2250
BlnI	CCTAGG	2 cut(s)	59, 1313
BlsI	GCNGC	9 cut(s)	45, 94, 256, 265, 542, 761, 1495, 2117, 2251
Bme1390I	CCNGG	9 cut(s)	338, 382, 423, 424, 433, 1098, 1200, 1454, 2070
Bme18I	GGWCC	2 cut(s)	442, 1556
BmeT110I	CYCGRG	3 cut(s)	197, 286, 422
BmiI	GGNNCC	9 cut(s)	258, 416, 417, 444, 457, 1040, 1310, 1311, 2067
BmrFI	CCNGG	9 cut(s)	338, 382, 423, 424, 433, 1098, 1200, 1454, 2070
BmrI	ACTGGG	1 cut(s)	130
BmsI	GCATC	6 cut(s)	872, 1178, 1197, 1745, 1966, 2176
BmuI	ACTGGG	1 cut(s)	130
BpiI	GAAGAC	3 cut(s)	747, 786, 1036
BpmI	CTGGAG	2 cut(s)	386, 1922
Bpu10I	CCTNAGC	1 cut(s)	2309
BpuMI	CCSGG	5 cut(s)	338, 382, 423, 424, 433
BsaAI	YACGTR	1 cut(s)	322
BsaBI	GATNNNNATC	2 cut(s)	915, 1008
BsaHI	GRCGYC	1 cut(s)	257
BsaI	GGTCTC	1 cut(s)	539
BsaJI	CCNNGG	6 cut(s)	59, 87, 287, 422, 535, 1313
BsaXI	ACNNNNNCTCC	2 cut(s)	1895, 1925
Bse118I	RCCGGY	3 cut(s)	95, 259, 1069
Bse1I	ACTGG	4 cut(s)	125, 369, 1707, 1905
Bse3DI	GCAATG	1 cut(s)	1134
Bse8I	GATNNNNATC	2 cut(s)	915, 1008
BseBI	CCWGG	4 cut(s)	1098, 1200, 1454, 2070
BseDI	CCNNGG	6 cut(s)	59, 87, 287, 422, 535, 1313
BseGI	GGATG	7 cut(s)	901, 1106, 1152, 1212, 1330, 2191, 2407
BseJI	GATNNNNATC	2 cut(s)	915, 1008
BseMI	GCAATG	1 cut(s)	1134
BseMII	CTCAG	4 cut(s)	1484, 1759, 1821, 2165
BseNI	ACTGG	4 cut(s)	125, 369, 1707, 1905
BseRI	GAGGAG	4 cut(s)	122, 383, 386, 1795
BseSI	GKGCMC	4 cut(s)	338, 387, 418, 1312
BseXI	GCAGC	4 cut(s)	55, 771, 1480, 2261
BsgI	GTGCAG	1 cut(s)	2102
Bsh1236I	CGCG	3 cut(s)	254, 282, 332
Bsh1285I	CGRYCG	1 cut(s)	2400
BshFI	GGCC	9 cut(s)	92, 161, 173, 416, 431, 458, 869, 1310, 1439
BshNI	GGYRCC	2 cut(s)	256, 1038
BsiEI	CGRYCG	1 cut(s)	2400
BsiHKAI	GWGCWC	4 cut(s)	302, 474, 2017, 2307
BsiHKCI	CYCGRG	3 cut(s)	197, 286, 422
BsiSI	CCGG	9 cut(s)	96, 221, 233, 260, 338, 381, 423, 433, 1070
BslFI	GGGAC	6 cut(s)	131, 187, 428, 439, 1288, 1496
BsmAI	GTCTC	2 cut(s)	539, 2216
BsmFI	GGGAC	6 cut(s)	131, 187, 428, 439, 1288, 1496
BsnI	GGCC	9 cut(s)	92, 161, 173, 416, 431, 458, 869, 1310, 1439
Bso31I	GGTCTC	1 cut(s)	539
BsoBI	CYCGRG	3 cut(s)	197, 286, 422
Bsp120I	GGGCCC	2 cut(s)	414, 1308
Bsp1286I	GDGCHC	8 cut(s)	302, 338, 387, 418, 474, 1312, 2017, 2307
Bsp143I	GATC	6 cut(s)	127, 1162, 1504, 1688, 1824, 2092
Bsp19I	CCATGG	1 cut(s)	87
BspANI	GGCC	9 cut(s)	92, 161, 173, 416, 431, 458, 869, 1310, 1439
BspCNI	CTCAG	4 cut(s)	1483, 1758, 1820, 2164
BspFNI	CGCG	3 cut(s)	254, 282, 332
BspHI	TCATGA	2 cut(s)	721, 1827
BspLI	GGNNCC	9 cut(s)	258, 416, 417, 444, 457, 1040, 1310, 1311, 2067
BspMI	ACCTGC	1 cut(s)	2436
BspPI	GGATC	3 cut(s)	1157, 1696, 2100
BspT107I	GGYRCC	2 cut(s)	256, 1038
BspTNI	GGTCTC	1 cut(s)	539
BsrDI	GCAATG	1 cut(s)	1134
BsrFI	RCCGGY	3 cut(s)	95, 259, 1069
BsrI	ACTGG	4 cut(s)	125, 369, 1707, 1905
BssAI	RCCGGY	3 cut(s)	95, 259, 1069
BssECI	CCNNGG	6 cut(s)	59, 87, 287, 422, 535, 1313
BssMI	GATC	6 cut(s)	127, 1162, 1504, 1688, 1824, 2092
BssNI	GRCGYC	1 cut(s)	257
BssSI	CACGAG	1 cut(s)	2016
BssT1I	CCWWGG	3 cut(s)	59, 87, 1313
Bst2BI	CACGAG	1 cut(s)	2016
Bst2UI	CCWGG	4 cut(s)	1098, 1200, 1454, 2070
Bst4CI	ACNGT	8 cut(s)	145, 409, 529, 746, 753, 939, 1117, 2285
Bst6I	CTCTTC	1 cut(s)	2232
BstACI	GRCGYC	1 cut(s)	257
BstBAI	YACGTR	1 cut(s)	322
BstDEI	CTNAG	9 cut(s)	1403, 1470, 1745, 1793, 1807, 2027, 2111, 2151, 2309
BstDSI	CCRYGG	1 cut(s)	87
BstF5I	GGATG	7 cut(s)	901, 1106, 1152, 1212, 1330, 2191, 2407
BstFNI	CGCG	3 cut(s)	254, 282, 332
BstH2I	RGCGCY	1 cut(s)	260
BstHHI	GCGC	5 cut(s)	254, 259, 282, 332, 515
BstKTI	GATC	6 cut(s)	130, 1165, 1507, 1691, 1827, 2095
BstMAI	GTCTC	2 cut(s)	539, 2216
BstMBI	GATC	6 cut(s)	127, 1162, 1504, 1688, 1824, 2092
BstMCI	CGRYCG	1 cut(s)	2400
BstMWI	GCNNNNNNNGC	7 cut(s)	193, 260, 263, 486, 510, 2124, 2258
BstNI	CCWGG	4 cut(s)	1098, 1200, 1454, 2070
BstNSI	RCATGY	2 cut(s)	1341, 1529
BstSCI	CCNGG	9 cut(s)	336, 380, 421, 422, 431, 1096, 1198, 1452, 2068
BstSLI	GKGCMC	4 cut(s)	338, 387, 418, 1312
BstUI	CGCG	3 cut(s)	254, 282, 332
BstV1I	GCAGC	4 cut(s)	55, 771, 1480, 2261
BstV2I	GAAGAC	3 cut(s)	747, 786, 1036
BstX2I	RGATCY	1 cut(s)	2092
BstXI	CCANNNNNNTGG	2 cut(s)	310, 896
BstYI	RGATCY	1 cut(s)	2092
BsuI	GTATCC	2 cut(s)	1426, 2149
BsuRI	GGCC	9 cut(s)	92, 161, 173, 416, 431, 458, 869, 1310, 1439
BtgI	CCRYGG	1 cut(s)	87
BtgZI	GCGATG	1 cut(s)	2204
BtsCI	GGATG	7 cut(s)	901, 1106, 1152, 1212, 1330, 2191, 2407
BtsI	GCAGTG	4 cut(s)	572, 856, 1488, 2370
BtsIMutI	CAGTG	6 cut(s)	572, 856, 944, 1488, 1714, 2370
BveI	ACCTGC	1 cut(s)	2436
CaiI	CAGNNNCTG	1 cut(s)	501
CciI	TCATGA	2 cut(s)	721, 1827
CfoI	GCGC	5 cut(s)	254, 259, 282, 332, 515
Cfr10I	RCCGGY	3 cut(s)	95, 259, 1069
Cfr9I	CCCGGG	1 cut(s)	422
CseI	GACGC	1 cut(s)	623
Csp6I	GTAC	3 cut(s)	1196, 1610, 2002
CviQI	GTAC	3 cut(s)	1196, 1610, 2002
DdeI	CTNAG	9 cut(s)	1403, 1470, 1745, 1793, 1807, 2027, 2111, 2151, 2309
DinI	GGCGCC	1 cut(s)	258
DpnI	GATC	6 cut(s)	129, 1164, 1506, 1690, 1826, 2094
DpnII	GATC	6 cut(s)	127, 1162, 1504, 1688, 1824, 2092
DraI	TTTAAA	1 cut(s)	2238
DrdI	GACNNNNNNGTC	1 cut(s)	143
DseDI	GACNNNNNNGTC	1 cut(s)	143
EaeI	YGGCCR	3 cut(s)	90, 159, 1437
Eam1104I	CTCTTC	1 cut(s)	2232
EarI	CTCTTC	1 cut(s)	2232
EciI	GGCGGA	2 cut(s)	166, 921
Ecl136II	GAGCTC	2 cut(s)	472, 2305
Eco130I	CCWWGG	3 cut(s)	59, 87, 1313
Eco24I	GRGCYC	4 cut(s)	418, 474, 1312, 2307
Eco31I	GGTCTC	1 cut(s)	539
Eco47I	GGWCC	2 cut(s)	442, 1556
Eco53kI	GAGCTC	2 cut(s)	472, 2305
Eco57I	CTGAAG	2 cut(s)	729, 1785
Eco72I	CACGTG	1 cut(s)	322
Eco88I	CYCGRG	3 cut(s)	197, 286, 422
EcoICRI	GAGCTC	2 cut(s)	472, 2305
EcoO109I	RGGNCCY	3 cut(s)	415, 442, 1309
EcoRI	GAATTC	1 cut(s)	1019
EcoRII	CCWGG	4 cut(s)	1096, 1198, 1452, 2068
EcoT14I	CCWWGG	3 cut(s)	59, 87, 1313
EcoT38I	GRGCYC	4 cut(s)	418, 474, 1312, 2307
EgeI	GGCGCC	1 cut(s)	258
EheI	GGCGCC	1 cut(s)	258
ErhI	CCWWGG	3 cut(s)	59, 87, 1313
FalI	AAGNNNNNCTT	6 cut(s)	767, 799, 1659, 1691, 2250, 2282
FaqI	GGGAC	6 cut(s)	131, 187, 428, 439, 1288, 1496
FauI	CCCGC	8 cut(s)	192, 201, 225, 237, 307, 390, 426, 1299
FblI	GTMKAC	2 cut(s)	147, 957
Fnu4HI	GCNGC	9 cut(s)	44, 93, 255, 264, 541, 760, 1494, 2116, 2250
FokI	GGATG	7 cut(s)	908, 1113, 1159, 1219, 1317, 2198, 2394
FriOI	GRGCYC	4 cut(s)	418, 474, 1312, 2307
Fsp4HI	GCNGC	9 cut(s)	44, 93, 255, 264, 541, 760, 1494, 2116, 2250
FspBI	CTAG	6 cut(s)	60, 1026, 1062, 1314, 1548, 2322
GlaI	GCGC	5 cut(s)	253, 258, 281, 331, 514
GluI	GCNGC	9 cut(s)	44, 93, 255, 264, 541, 760, 1494, 2116, 2250
GsuI	CTGGAG	2 cut(s)	386, 1922
HaeII	RGCGCY	1 cut(s)	260
HaeIII	GGCC	9 cut(s)	92, 161, 173, 416, 431, 458, 869, 1310, 1439
HapII	CCGG	9 cut(s)	96, 221, 233, 260, 338, 381, 423, 433, 1070
HgaI	GACGC	1 cut(s)	623
HhaI	GCGC	5 cut(s)	254, 259, 282, 332, 515
Hin1I	GRCGYC	1 cut(s)	257
Hin6I	GCGC	5 cut(s)	252, 257, 280, 330, 513
HinP1I	GCGC	5 cut(s)	252, 257, 280, 330, 513
HincII	GTYRAC	3 cut(s)	148, 1722, 1890
HindII	GTYRAC	3 cut(s)	148, 1722, 1890
HindIII	AAGCTT	1 cut(s)	2074
HpaII	CCGG	9 cut(s)	96, 221, 233, 260, 338, 381, 423, 433, 1070
HphI	GGTGA	4 cut(s)	133, 476, 740, 893
Hpy166II	GTNNAC	6 cut(s)	148, 346, 749, 958, 1722, 1890
Hpy188III	TCNNGA	8 cut(s)	403, 445, 722, 1111, 1425, 1828, 2018, 2153
Hpy8I	GTNNAC	6 cut(s)	148, 346, 749, 958, 1722, 1890
Hpy99I	CGWCG	4 cut(s)	149, 152, 155, 533
HpyAV	CCTTC	9 cut(s)	221, 596, 676, 704, 769, 791, 1197, 1429, 1472
HpyCH4III	ACNGT	8 cut(s)	145, 409, 529, 746, 753, 939, 1117, 2285
HpyCH4IV	ACGT	3 cut(s)	321, 1698, 2204
HpyCH4V	TGCA	5 cut(s)	4, 863, 1127, 1169, 2083
HpyF10VI	GCNNNNNNNGC	7 cut(s)	193, 260, 263, 486, 510, 2124, 2258
HpyF3I	CTNAG	9 cut(s)	1403, 1470, 1745, 1793, 1807, 2027, 2111, 2151, 2309
HpySE526I	ACGT	3 cut(s)	321, 1698, 2204
Hsp92I	GRCGYC	1 cut(s)	257
HspAI	GCGC	5 cut(s)	252, 257, 280, 330, 513
KasI	GGCGCC	1 cut(s)	256
KroI	GCCGGC	2 cut(s)	95, 259
KroNI	GCCGGC	2 cut(s)	97, 261
Kzo9I	GATC	6 cut(s)	127, 1162, 1504, 1688, 1824, 2092
LmnI	GCTCC	7 cut(s)	305, 469, 612, 2065, 2302, 2310, 2351
Lsp1109I	GCAGC	4 cut(s)	55, 771, 1480, 2261
LweI	GCATC	6 cut(s)	872, 1178, 1197, 1745, 1966, 2176
MaeI	CTAG	6 cut(s)	60, 1026, 1062, 1314, 1548, 2322
MaeII	ACGT	3 cut(s)	321, 1698, 2204
MaeIII	GTNAC	5 cut(s)	317, 635, 1152, 1389, 2434
MalI	GATC	6 cut(s)	129, 1164, 1506, 1690, 1826, 2094
MboI	GATC	6 cut(s)	127, 1162, 1504, 1688, 1824, 2092
MflI	RGATCY	1 cut(s)	2092
MhlI	GDGCHC	8 cut(s)	302, 338, 387, 418, 474, 1312, 2017, 2307
MlsI	TGGCCA	1 cut(s)	161
MluCI	AATT	9 cut(s)	626, 832, 1019, 1384, 1444, 1858, 2361, 2388, 2426
MluNI	TGGCCA	1 cut(s)	161
Mly113I	GGCGCC	1 cut(s)	257
MlyI	GAGTC	4 cut(s)	209, 507, 800, 2218
MmeI	TCCRAC	4 cut(s)	327, 998, 1059, 1843
Mox20I	TGGCCA	1 cut(s)	161
MreI	CGCCGGCG	2 cut(s)	95, 259
MroNI	GCCGGC	2 cut(s)	95, 259
MscI	TGGCCA	1 cut(s)	161
MseI	TTAA	4 cut(s)	465, 755, 2237, 2467
MslI	CAYNNNNRTG	4 cut(s)	726, 967, 1931, 2375
Msp20I	TGGCCA	1 cut(s)	161
MspA1I	CMGCKG	1 cut(s)	46
MspI	CCGG	9 cut(s)	96, 221, 233, 260, 338, 381, 423, 433, 1070
MspR9I	CCNGG	9 cut(s)	338, 382, 423, 424, 433, 1098, 1200, 1454, 2070
MteI	GCGCNGCGC	1 cut(s)	255
MvaI	CCWGG	4 cut(s)	1098, 1200, 1454, 2070
MvnI	CGCG	3 cut(s)	254, 282, 332
MwoI	GCNNNNNNNGC	7 cut(s)	193, 260, 263, 486, 510, 2124, 2258
NaeI	GCCGGC	2 cut(s)	97, 261
NarI	GGCGCC	1 cut(s)	257
NciI	CCSGG	5 cut(s)	338, 382, 423, 424, 433
NcoI	CCATGG	1 cut(s)	87
NdeII	GATC	6 cut(s)	127, 1162, 1504, 1688, 1824, 2092
NgoMIV	GCCGGC	2 cut(s)	95, 259
NlaIV	GGNNCC	9 cut(s)	258, 416, 417, 444, 457, 1040, 1310, 1311, 2067
NmeAIII	GCCGAG	1 cut(s)	516
NmuCI	GTSAC	2 cut(s)	317, 635
NspI	RCATGY	2 cut(s)	1341, 1529
PagI	TCATGA	2 cut(s)	721, 1827
PaqCI	CACCTGC	1 cut(s)	2436
PciI	ACATGT	2 cut(s)	1337, 1525
PcsI	WCGNNNNNNNCGW	2 cut(s)	141, 2323
PdiI	GCCGGC	2 cut(s)	97, 261
PflMI	CCANNNNNTGG	2 cut(s)	168, 1057
PfoI	TCCNGGA	1 cut(s)	1096
PkrI	GCNGC	9 cut(s)	45, 94, 256, 265, 542, 761, 1495, 2117, 2251
PleI	GAGTC	4 cut(s)	208, 506, 799, 2218
PluTI	GGCGCC	1 cut(s)	260
PmaCI	CACGTG	1 cut(s)	322
PmlI	CACGTG	1 cut(s)	322
PpsI	GAGTC	4 cut(s)	208, 506, 799, 2218
Ppu21I	YACGTR	1 cut(s)	322
PpuMI	RGGWCCY	1 cut(s)	442
PscI	ACATGT	2 cut(s)	1337, 1525
Psp124BI	GAGCTC	2 cut(s)	474, 2307
Psp5II	RGGWCCY	1 cut(s)	442
Psp6I	CCWGG	4 cut(s)	1096, 1198, 1452, 2068
PspCI	CACGTG	1 cut(s)	322
PspGI	CCWGG	4 cut(s)	1096, 1198, 1452, 2068
PspN4I	GGNNCC	9 cut(s)	258, 416, 417, 444, 457, 1040, 1310, 1311, 2067
PspOMI	GGGCCC	2 cut(s)	414, 1308
PspPPI	RGGWCCY	1 cut(s)	442
PstNI	CAGNNNCTG	1 cut(s)	501
PsuI	RGATCY	1 cut(s)	2092
RsaI	GTAC	3 cut(s)	1197, 1611, 2003
RsaNI	GTAC	3 cut(s)	1196, 1610, 2002
RseI	CAYNNNNRTG	4 cut(s)	726, 967, 1931, 2375
SacI	GAGCTC	2 cut(s)	474, 2307
SalI	GTCGAC	1 cut(s)	146
SaqAI	TTAA	4 cut(s)	465, 755, 2237, 2467
SatI	GCNGC	9 cut(s)	44, 93, 255, 264, 541, 760, 1494, 2116, 2250
Sau3AI	GATC	6 cut(s)	127, 1162, 1504, 1688, 1824, 2092
SchI	GAGTC	4 cut(s)	209, 507, 800, 2218
ScrFI	CCNGG	9 cut(s)	338, 382, 423, 424, 433, 1098, 1200, 1454, 2070
SduI	GDGCHC	8 cut(s)	302, 338, 387, 418, 474, 1312, 2017, 2307
SfaNI	GCATC	6 cut(s)	872, 1178, 1197, 1745, 1966, 2176
SfoI	GGCGCC	1 cut(s)	258
SgrAI	CRCCGGYG	2 cut(s)	95, 259
SgrDI	CGTCGACG	1 cut(s)	146
SinI	GGWCC	2 cut(s)	442, 1556
SmaI	CCCGGG	1 cut(s)	424
SmiMI	CAYNNNNRTG	4 cut(s)	726, 967, 1931, 2375
SpeI	ACTAGT	1 cut(s)	1547
Sse9I	AATT	9 cut(s)	626, 832, 1019, 1384, 1444, 1858, 2361, 2388, 2426
SspDI	GGCGCC	1 cut(s)	256
SspI	AATATT	1 cut(s)	1047
SspMI	CTAG	6 cut(s)	60, 1026, 1062, 1314, 1548, 2322
SstI	GAGCTC	2 cut(s)	474, 2307
StyD4I	CCNGG	9 cut(s)	336, 380, 421, 422, 431, 1096, 1198, 1452, 2068
StyI	CCWWGG	3 cut(s)	59, 87, 1313
TaaI	ACNGT	8 cut(s)	145, 409, 529, 746, 753, 939, 1117, 2285
TaiI	ACGT	3 cut(s)	324, 1701, 2207
TaqI	TCGA	3 cut(s)	135, 147, 619
TasI	AATT	9 cut(s)	626, 832, 1019, 1384, 1444, 1858, 2361, 2388, 2426
TatI	WGTACW	2 cut(s)	1609, 2001
TauI	GCSGC	5 cut(s)	95, 257, 266, 543, 2118
Tru1I	TTAA	4 cut(s)	465, 755, 2237, 2467
Tru9I	TTAA	4 cut(s)	465, 755, 2237, 2467
TscAI	CASTG	6 cut(s)	572, 856, 944, 1495, 1714, 2377
TseFI	GTSAC	2 cut(s)	317, 635
TseI	GCWGC	4 cut(s)	43, 759, 1493, 2249
Tsp45I	GTSAC	2 cut(s)	317, 635
TspDTI	ATGAA	6 cut(s)	96, 615, 1163, 1319, 1596, 2396
TspGWI	ACGGA	2 cut(s)	1082, 1247
TspMI	CCCGGG	1 cut(s)	422
TspRI	CASTG	6 cut(s)	572, 856, 944, 1495, 1714, 2377
Van91I	CCANNNNNTGG	2 cut(s)	168, 1057
VpaK11BI	GGWCC	2 cut(s)	442, 1556
XapI	RAATTY	2 cut(s)	1019, 2388
XceI	RCATGY	2 cut(s)	1341, 1529
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1140
XmaI	CCCGGG	1 cut(s)	422
XmaJI	CCTAGG	2 cut(s)	59, 1313
XmiI	GTMKAC	2 cut(s)	147, 957
XspI	CTAG	6 cut(s)	60, 1026, 1062, 1314, 1548, 2322

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.