Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000004

Orthogroup ID

OG0009955

Physical Location & Seq

Genomic Coordinates Forward (+)

28818362 .. 28824208

Gene Structure 5847 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug04G0164300.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1989 bp

ATGGGCACCTCTGCGCTTAACAAGAGAAAGGGAGCAAAACCGCAGAAGGCTTCGCCCAACAAGAAGAAGCAAAAGAAGGAGCCTTTCACCGCCAAAAACCCAAAGAAGCCCAAGATTGTTCAAGTTCCCGAACCTTCTGACGAAGAAGAAGAAGAAGAAGAAGAAGTAGAGGACCTGGAAGAGTTTGATGTAGGAGATGAGGAAGGATCTGGTTCAGATAGTGACACTGATATTTTTGGTGGGGATGATCCCCTACAAGATGATGACGATGATGACGACTCCCTCCCAGGAAGTGATGAAGATGAAGAGAAAGGTTCTTCAGATTCGGATTCCGACTCGGGTGATATAGAGAAGAAATCAAGGGTCATTGACCAAAAAACGCTGGAGGAAGAAGAAGAAGGTAGAAAGGAACTGGAATTAAATATCAAGGATGAATCTGATGAGTTCAGATTACCAACTAAGCAGGAACTCGAACAAGAGGCGCATCAACCTCCTGATCTTTCGCACCTACAGAGGAGGATAAAAGAGATTGTTCGAGTGCTCTCAAATTTCAAGGCATTGAGGCAAGAGGGGGCGTCAAGGAAGGATTATGTAGAACAGCTTAAGAGAGATTTAAGCTCATACTACGGCTACAATGACTTTTTGATTGGAGCTTTAGTAGAGATGTTTCCAGTTGTGGAACTTGTGGAGCTCATTGAAGCTTTTGAAAAGCCTCGACCTATATGCCTCCGAACTAACACTCTGAAGACACGAAGGAGGGATTTGGCAGCTAGTTTGATAAACAGAGGAGTAAATCTAGATCCCTTAAGCAAGTGGTCAAAAGTTGGACTGGTTGTGTATGAATCACAAGTCCCAGTTGGTGCCACTCCTGAATATATGGCTGGTTATTACATGCTCCAAAGTGCAAGCTCCTTTTTGCCCGTTATGGCCCTTGCTCCTCAAGAAAATGAACGAGTTGTTGATATGGCGGCTGCTCCTGGTGGTAAAACAACCTATGTAGCGGCTCTTATGAAAAATAGTGGAATTATATTTGCAAATGAAATGAAGGAGCCAAGGCTCAAGTCCCTCACTGCTAATTTGCATCGTATGGGGGTGACAAACACAGTCGTTTGTAACTATGACGGCAAGGAGCTCCCTAAGGTTCTGGGTAGCAATGCGGTTGATAGAGTTCTGTTAGATGCTCCTTGCAGCGGGACAGGGGTTATATCCAAAGATGAGTCTGTTAAAACTTCTAAAAGTTCTGATGAAATACAGAAATGTGCTCATCTCCAGAAGCAATTGATACTAGCTGCAATTGACATGGTGGATGCGAATTCGAAATCAGGGGGATACATTGTGTACTCCACGTGCTCCATTATGGTTGCTGAGAATGAAGCTGTTATTGACTATGCACTCAGGAAGAGAAATGTTAAACTTGTTCCCTGCGGACTTGACTTTGGGCGTCCAGGGTTTACCCGGTTTAGGGAACAGCGCTTCCACCCATCAGTGGAAAAGACGAGGCGGTTCTACCCTCATGTTCATAATATGGATGGTTTTTTTGTGGCGAAGCTGAAAAAGATGAGCAATTTGAAGCCAACTACAGCAGAATCTCGACTATCTGAAACAGTAGAGGCTGAAACAGTAGACGTAGATCTCAACATGACAGAAGACGACAGTGAAAAGAATGCCAGAGTAGATGTTCAGCAGCATTCGGCAGATGACGACACGGAAAGTGAAAAGAAGGTTTTGGAAGAAGGGAAACCAGAATTGGCAGGCACTGGGAAAAAGAGGAAAGAAAAGAAGCTCCCCTCCTTTTTCTCTCATCTGAAAGGGCAATTCCCCTTGGATCAAAAAGATGAAAAGAAAGTGAAATCCTCGGACCAAAAAAAGGAAAAGAGAGTGAAACTGAAATTTCCTCCTAGGGAGGAGATTGCAAAAGCCAGGGAAGAGAAGAGGACAGCTCTGAGGAAAAGCAAAGCTAAGAACAATGCCGTTGGTACAGGAGAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0006355 GO:0006950 GO:0007154 GO:0008150 GO:0009267 GO:0009605 GO:0009889 GO:0009987 GO:0009991 GO:0010468 GO:0010556 GO:0016604 GO:0016607 GO:0019219 GO:0019222 GO:0031323 GO:0031326 GO:0031667 GO:0031668 GO:0031669 GO:0031974 GO:0031981 GO:0033554 GO:0035874 GO:0040008 GO:0042594 GO:0042802 GO:0042803 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044451 GO:0044464 GO:0046983 GO:0048638 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051171 GO:0051252 GO:0051716 GO:0060255 GO:0065007 GO:0070013 GO:0071496 GO:0080090 GO:0120126 GO:1903506 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

SBP

Protein Analysis

662

Amino Acids

74.19

Weight (kDa)

5.39

Isoelectric Point (pI)

48.95

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
RsmF-B_ferredox	PF22458	213 - 279	8.9e-06	Methyltr_RsmF/B-like, ferredoxin-like domain
Methyltr_RsmF_N	PF17125	227 - 302	1.5e-06	N-terminal domain of 16S rRNA methyltransferase RsmF
Methyltr_RsmB-F	PF01189	308 - 518	2e-71	16S rRNA methyltransferase RsmB/F

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0009955)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G18830 AT5G18830 AT5G18830
fragaria_vesca	FvH4_4g16910 FvH4_4g16910 FvH4_4g16910 FvH4_4g16910
malus_domestica	MD13G1175800.v1.1 MD16G1177600.v1.1
prunus_persica	Prupe.1G144600_v2.0.a1
pyrus_communis	pycom13g15150 pycom16g14900
rosa_chinensis	RchiOBHm_Chr4g0420491
rosa_laevigata	RLG00000007757
rosa_roxburghii	Rroxscaffold_5G00363110
rosa_rugosa	Rorug04G0164300
rosa_samantha	Rh4AG225900 Rh4BG228600 Rh4CG240200 Rh4DG224300
rosa_wichuraiana	Rw4G019500

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	2 cut(s)	5, 860
AccI	GTMKAC	1 cut(s)	1623
AciI	CCGC	8 cut(s)	41, 90, 968, 1001, 1157, 1191, 1425, 1501
AclWI	GGATC	4 cut(s)	214, 242, 794, 1833
AcsI	RAATTY	3 cut(s)	547, 1312, 1889
AcuI	CTGAAG	2 cut(s)	303, 764
AcvI	CACGTG	1 cut(s)	1347
AcyI	GRCGYC	2 cut(s)	575, 1441
AfaI	GTAC	2 cut(s)	1340, 1978
AfeI	AGCGCT	1 cut(s)	1472
AfiI	CCNNNNNNNGG	5 cut(s)	1190, 1461, 1462, 1486, 1867
AflII	CTTAAG	2 cut(s)	602, 805
AgsI	TTSAA	5 cut(s)	122, 553, 698, 707, 1570
AjnI	CCWGG	5 cut(s)	174, 286, 976, 1444, 1919
AjuI	GAANNNNNNNTTGG	2 cut(s)	1730, 1762
AloI	GAACNNNNNNTCC	2 cut(s)	1458, 1490
Alw21I	GWGCWC	5 cut(s)	543, 693, 1134, 1264, 1352
AlwI	GGATC	4 cut(s)	214, 242, 794, 1833
AlwNI	CAGNNNCTG	1 cut(s)	1757
Ama87I	CYCGRG	1 cut(s)	337
Aor51HI	AGCGCT	1 cut(s)	1472
AoxI	GGCC	1 cut(s)	927
ApeKI	GCWGC	5 cut(s)	767, 971, 1188, 1289, 1684
ApoI	RAATTY	3 cut(s)	547, 1312, 1889
AspA2I	CCTAGG	1 cut(s)	1898
AspLEI	GCGC	3 cut(s)	16, 484, 1473
AspS9I	GGNCC	3 cut(s)	172, 928, 1858
AsuC2I	CCSGG	1 cut(s)	1456
AsuHPI	GGTGA	3 cut(s)	79, 353, 1105
AsuII	TTCGAA	1 cut(s)	1316
AvaI	CYCGRG	1 cut(s)	337
AvaII	GGWCC	2 cut(s)	172, 1858
AvrII	CCTAGG	1 cut(s)	1898
AxyI	CCTNAGG	1 cut(s)	1137
BaeGI	GKGCMC	1 cut(s)	8
BanI	GGYRCC	2 cut(s)	5, 860
BanII	GRGCYC	2 cut(s)	693, 1134
BbrPI	CACGTG	1 cut(s)	1347
BbsI	GAAGAC	2 cut(s)	752, 1653
Bbv12I	GWGCWC	5 cut(s)	543, 693, 1134, 1264, 1352
BbvI	GCAGC	5 cut(s)	779, 958, 1200, 1276, 1696
BccI	CCATC	2 cut(s)	1489, 1523
BceAI	ACGGC	3 cut(s)	643, 1138, 1955
BcgI	CGANNNNNNTGC	2 cut(s)	705, 739
BciT130I	CCWGG	5 cut(s)	176, 288, 978, 1446, 1921
BciVI	GTATCC	1 cut(s)	1322
BcnI	CCSGG	1 cut(s)	1456
BfaI	CTAG	4 cut(s)	771, 797, 1286, 1899
BfmI	CTRYAG	2 cut(s)	509, 1578
BfoI	RGCGCY	1 cut(s)	1474
BfrI	CTTAAG	2 cut(s)	602, 805
BfuI	GTATCC	1 cut(s)	1322
BglII	AGATCT	1 cut(s)	1630
BisI	GCNGC	7 cut(s)	768, 969, 972, 1002, 1189, 1290, 1685
BlnI	CCTAGG	1 cut(s)	1898
BlsI	GCNGC	7 cut(s)	769, 970, 973, 1003, 1190, 1291, 1686
Bme1390I	CCNGG	6 cut(s)	176, 288, 978, 1446, 1456, 1921
Bme18I	GGWCC	2 cut(s)	172, 1858
BmeT110I	CYCGRG	1 cut(s)	337
BmgT120I	GGNCC	3 cut(s)	172, 928, 1858
BmiI	GGNNCC	4 cut(s)	7, 81, 862, 1050
BmrFI	CCNGG	6 cut(s)	176, 288, 978, 1446, 1456, 1921
BmrI	ACTGGG	2 cut(s)	848, 1767
BmsI	GCATC	4 cut(s)	493, 1090, 1168, 1297
BmuI	ACTGGG	2 cut(s)	848, 1767
BpiI	GAAGAC	2 cut(s)	752, 1653
BplI	GAGNNNNNCTC	2 cut(s)	1924, 1956
BpmI	CTGGAG	2 cut(s)	404, 1253
Bpu14I	TTCGAA	1 cut(s)	1316
BpuEI	CTTGAG	2 cut(s)	924, 1043
BpuMI	CCSGG	1 cut(s)	1456
BsaAI	YACGTR	1 cut(s)	1347
BsaHI	GRCGYC	2 cut(s)	575, 1441
BsaJI	CCNNGG	7 cut(s)	286, 1052, 1445, 1821, 1854, 1898, 1920
BsaXI	ACNNNNNCTCC	2 cut(s)	642, 672
Bsc4I	CCNNNNNNNGG	5 cut(s)	1190, 1461, 1462, 1486, 1867
Bse1I	ACTGG	5 cut(s)	417, 671, 834, 854, 1762
Bse21I	CCTNAGG	1 cut(s)	1137
Bse3DI	GCAATG	1 cut(s)	1159
BseBI	CCWGG	5 cut(s)	176, 288, 978, 1446, 1921
BseDI	CCNNGG	7 cut(s)	286, 1052, 1445, 1821, 1854, 1898, 1920
BseGI	GGATG	4 cut(s)	250, 436, 1312, 1534
BseLI	CCNNNNNNNGG	5 cut(s)	1190, 1461, 1462, 1486, 1867
BseMI	GCAATG	1 cut(s)	1159
BseMII	CTCAG	3 cut(s)	1356, 1408, 1934
BseNI	ACTGG	5 cut(s)	417, 671, 834, 854, 1762
BseRI	GAGGAG	4 cut(s)	529, 801, 927, 1919
BseSI	GKGCMC	1 cut(s)	8
BseXI	GCAGC	5 cut(s)	779, 958, 1200, 1276, 1696
BshFI	GGCC	1 cut(s)	929
BshNI	GGYRCC	2 cut(s)	5, 860
BsiHKAI	GWGCWC	5 cut(s)	543, 693, 1134, 1264, 1352
BsiHKCI	CYCGRG	1 cut(s)	337
BsiSI	CCGG	1 cut(s)	1456
BslFI	GGGAC	3 cut(s)	836, 1048, 1207
BslI	CCNNNNNNNGG	5 cut(s)	1190, 1461, 1462, 1486, 1867
BsmFI	GGGAC	3 cut(s)	836, 1048, 1207
BsmI	GAATGC	2 cut(s)	1669, 1687
BsnI	GGCC	1 cut(s)	929
BsoBI	CYCGRG	1 cut(s)	337
Bsp119I	TTCGAA	1 cut(s)	1316
Bsp1286I	GDGCHC	6 cut(s)	8, 543, 693, 1134, 1264, 1352
Bsp143I	GATC	6 cut(s)	206, 247, 496, 799, 1630, 1825
BspACI	CCGC	8 cut(s)	41, 90, 968, 1001, 1157, 1191, 1425, 1501
BspANI	GGCC	1 cut(s)	929
BspCNI	CTCAG	3 cut(s)	1357, 1407, 1935
BspLI	GGNNCC	4 cut(s)	7, 81, 862, 1050
BspPI	GGATC	4 cut(s)	214, 242, 794, 1833
BspT104I	TTCGAA	1 cut(s)	1316
BspT107I	GGYRCC	2 cut(s)	5, 860
BspTI	CTTAAG	2 cut(s)	602, 805
BsrDI	GCAATG	1 cut(s)	1159
BsrI	ACTGG	5 cut(s)	417, 671, 834, 854, 1762
BssECI	CCNNGG	7 cut(s)	286, 1052, 1445, 1821, 1854, 1898, 1920
BssMI	GATC	6 cut(s)	206, 247, 496, 799, 1630, 1825
BssNI	GRCGYC	2 cut(s)	575, 1441
BssT1I	CCWWGG	3 cut(s)	1052, 1821, 1898
Bst2UI	CCWGG	5 cut(s)	176, 288, 978, 1446, 1921
Bst4CI	ACNGT	4 cut(s)	1105, 1606, 1621, 1655
Bst6I	CTCTTC	5 cut(s)	174, 300, 1394, 1920, 1925
BstACI	GRCGYC	2 cut(s)	575, 1441
BstAFI	CTTAAG	2 cut(s)	602, 805
BstBAI	YACGTR	1 cut(s)	1347
BstBI	TTCGAA	1 cut(s)	1316
BstC8I	GCNNGC	2 cut(s)	907, 1753
BstDEI	CTNAG	6 cut(s)	459, 1137, 1365, 1394, 1943, 1959
BstF5I	GGATG	4 cut(s)	250, 436, 1312, 1534
BstH2I	RGCGCY	1 cut(s)	1474
BstHHI	GCGC	3 cut(s)	16, 484, 1473
BstKTI	GATC	6 cut(s)	209, 250, 499, 802, 1633, 1828
BstMBI	GATC	6 cut(s)	206, 247, 496, 799, 1630, 1825
BstNI	CCWGG	5 cut(s)	176, 288, 978, 1446, 1921
BstNSI	RCATGY	1 cut(s)	895
BstSCI	CCNGG	6 cut(s)	174, 286, 976, 1444, 1454, 1919
BstSFI	CTRYAG	2 cut(s)	509, 1578
BstSLI	GKGCMC	1 cut(s)	8
BstV1I	GCAGC	5 cut(s)	779, 958, 1200, 1276, 1696
BstV2I	GAAGAC	2 cut(s)	752, 1653
BstX2I	RGATCY	3 cut(s)	206, 799, 1630
BstYI	RGATCY	3 cut(s)	206, 799, 1630
Bsu36I	CCTNAGG	1 cut(s)	1137
BsuI	GTATCC	1 cut(s)	1322
BsuRI	GGCC	1 cut(s)	929
BtsCI	GGATG	4 cut(s)	250, 436, 1312, 1534
BtsI	GCAGTG	1 cut(s)	1068
BtsIMutI	CAGTG	5 cut(s)	225, 1068, 1491, 1660, 1755
Cac8I	GCNNGC	2 cut(s)	907, 1753
CaiI	CAGNNNCTG	1 cut(s)	1757
CfoI	GCGC	3 cut(s)	16, 484, 1473
Cfr13I	GGNCC	3 cut(s)	172, 928, 1858
CseI	GACGC	2 cut(s)	564, 1430
Csp6I	GTAC	2 cut(s)	1339, 1977
CviAII	CATG	4 cut(s)	892, 1300, 1514, 1639
CviQI	GTAC	2 cut(s)	1339, 1977
DdeI	CTNAG	6 cut(s)	459, 1137, 1365, 1394, 1943, 1959
DpnI	GATC	6 cut(s)	208, 249, 498, 801, 1632, 1827
DpnII	GATC	6 cut(s)	206, 247, 496, 799, 1630, 1825
Eam1104I	CTCTTC	5 cut(s)	174, 300, 1394, 1920, 1925
EarI	CTCTTC	5 cut(s)	174, 300, 1394, 1920, 1925
Ecl136II	GAGCTC	2 cut(s)	691, 1132
Eco130I	CCWWGG	3 cut(s)	1052, 1821, 1898
Eco24I	GRGCYC	2 cut(s)	693, 1134
Eco47I	GGWCC	2 cut(s)	172, 1858
Eco47III	AGCGCT	1 cut(s)	1472
Eco53kI	GAGCTC	2 cut(s)	691, 1132
Eco57I	CTGAAG	2 cut(s)	303, 764
Eco72I	CACGTG	1 cut(s)	1347
Eco81I	CCTNAGG	1 cut(s)	1137
Eco88I	CYCGRG	1 cut(s)	337
EcoICRI	GAGCTC	2 cut(s)	691, 1132
EcoO109I	RGGNCCY	1 cut(s)	172
EcoRI	GAATTC	1 cut(s)	1312
EcoRII	CCWGG	5 cut(s)	174, 286, 976, 1444, 1919
EcoT14I	CCWWGG	3 cut(s)	1052, 1821, 1898
EcoT38I	GRGCYC	2 cut(s)	693, 1134
ErhI	CCWWGG	3 cut(s)	1052, 1821, 1898
FaeI	CATG	4 cut(s)	895, 1303, 1517, 1642
FaqI	GGGAC	3 cut(s)	836, 1048, 1207
FatI	CATG	4 cut(s)	891, 1299, 1513, 1638
FauI	CCCGC	1 cut(s)	1184
FblI	GTMKAC	1 cut(s)	1623
Fnu4HI	GCNGC	7 cut(s)	768, 969, 972, 1002, 1189, 1290, 1685
FokI	GGATG	4 cut(s)	257, 443, 1319, 1541
FriOI	GRGCYC	2 cut(s)	693, 1134
Fsp4HI	GCNGC	7 cut(s)	768, 969, 972, 1002, 1189, 1290, 1685
FspBI	CTAG	4 cut(s)	771, 797, 1286, 1899
GlaI	GCGC	3 cut(s)	15, 483, 1472
GluI	GCNGC	7 cut(s)	768, 969, 972, 1002, 1189, 1290, 1685
GsuI	CTGGAG	2 cut(s)	404, 1253
HaeII	RGCGCY	1 cut(s)	1474
HaeIII	GGCC	1 cut(s)	929
HapII	CCGG	1 cut(s)	1456
HgaI	GACGC	2 cut(s)	564, 1430
HhaI	GCGC	3 cut(s)	16, 484, 1473
Hin1I	GRCGYC	2 cut(s)	575, 1441
Hin1II	CATG	4 cut(s)	895, 1303, 1517, 1642
Hin6I	GCGC	3 cut(s)	14, 482, 1471
HinP1I	GCGC	3 cut(s)	14, 482, 1471
HindIII	AAGCTT	1 cut(s)	699
HinfI	GANTC	8 cut(s)	278, 323, 329, 335, 434, 842, 1217, 1586
HpaII	CCGG	1 cut(s)	1456
HphI	GGTGA	3 cut(s)	79, 353, 1105
Hpy166II	GTNNAC	3 cut(s)	1339, 1452, 1624
Hpy188III	TCNNGA	8 cut(s)	128, 494, 797, 869, 941, 1270, 1396, 1590
Hpy8I	GTNNAC	3 cut(s)	1339, 1452, 1624
HpyCH4III	ACNGT	4 cut(s)	1105, 1606, 1621, 1655
HpyCH4IV	ACGT	2 cut(s)	1346, 1626
HpyCH4V	TGCA	7 cut(s)	905, 1034, 1081, 1188, 1292, 1391, 1913
HpyF3I	CTNAG	6 cut(s)	459, 1137, 1365, 1394, 1943, 1959
HpySE526I	ACGT	2 cut(s)	1346, 1626
Hsp92I	GRCGYC	2 cut(s)	575, 1441
Hsp92II	CATG	4 cut(s)	895, 1303, 1517, 1642
HspAI	GCGC	3 cut(s)	14, 482, 1471
Kzo9I	GATC	6 cut(s)	206, 247, 496, 799, 1630, 1825
Lsp1109I	GCAGC	5 cut(s)	779, 958, 1200, 1276, 1696
LweI	GCATC	4 cut(s)	493, 1090, 1168, 1297
MaeI	CTAG	4 cut(s)	771, 797, 1286, 1899
MaeII	ACGT	2 cut(s)	1346, 1626
MaeIII	GTNAC	3 cut(s)	221, 1093, 1112
MalI	GATC	6 cut(s)	208, 249, 498, 801, 1632, 1827
MboI	GATC	6 cut(s)	206, 247, 496, 799, 1630, 1825
MfeI	CAATTG	2 cut(s)	1277, 1293
MflI	RGATCY	3 cut(s)	206, 799, 1630
MhlI	GDGCHC	6 cut(s)	8, 543, 693, 1134, 1264, 1352
MlyI	GAGTC	3 cut(s)	272, 329, 1226
MmeI	TCCRAC	2 cut(s)	357, 805
MseI	TTAA	7 cut(s)	18, 419, 603, 614, 806, 1224, 1410
MspA1I	CMGCKG	1 cut(s)	1191
MspCI	CTTAAG	2 cut(s)	602, 805
MspI	CCGG	1 cut(s)	1456
MspR9I	CCNGG	6 cut(s)	176, 288, 978, 1446, 1456, 1921
MunI	CAATTG	2 cut(s)	1277, 1293
Mva1269I	GAATGC	2 cut(s)	1669, 1687
MvaI	CCWGG	5 cut(s)	176, 288, 978, 1446, 1921
NciI	CCSGG	1 cut(s)	1456
NdeII	GATC	6 cut(s)	206, 247, 496, 799, 1630, 1825
NlaIII	CATG	4 cut(s)	895, 1303, 1517, 1642
NlaIV	GGNNCC	4 cut(s)	7, 81, 862, 1050
NmuCI	GTSAC	2 cut(s)	221, 1093
NspI	RCATGY	1 cut(s)	895
NspV	TTCGAA	1 cut(s)	1316
PcsI	WCGNNNNNNNCGW	1 cut(s)	273
PctI	GAATGC	2 cut(s)	1669, 1687
PfeI	GAWTC	5 cut(s)	323, 329, 434, 842, 1586
PkrI	GCNGC	7 cut(s)	769, 970, 973, 1003, 1190, 1291, 1686
PleI	GAGTC	3 cut(s)	272, 329, 1225
PmaCI	CACGTG	1 cut(s)	1347
PmlI	CACGTG	1 cut(s)	1347
PpsI	GAGTC	3 cut(s)	272, 329, 1225
Ppu21I	YACGTR	1 cut(s)	1347
PpuMI	RGGWCCY	1 cut(s)	172
Psp124BI	GAGCTC	2 cut(s)	693, 1134
Psp5II	RGGWCCY	1 cut(s)	172
Psp6I	CCWGG	5 cut(s)	174, 286, 976, 1444, 1919
PspCI	CACGTG	1 cut(s)	1347
PspGI	CCWGG	5 cut(s)	174, 286, 976, 1444, 1919
PspN4I	GGNNCC	4 cut(s)	7, 81, 862, 1050
PspPI	GGNCC	3 cut(s)	172, 928, 1858
PspPPI	RGGWCCY	1 cut(s)	172
PstNI	CAGNNNCTG	1 cut(s)	1757
PsuI	RGATCY	3 cut(s)	206, 799, 1630
RsaI	GTAC	2 cut(s)	1340, 1978
RsaNI	GTAC	2 cut(s)	1339, 1977
SacI	GAGCTC	2 cut(s)	693, 1134
SaqAI	TTAA	7 cut(s)	18, 419, 603, 614, 806, 1224, 1410
SatI	GCNGC	7 cut(s)	768, 969, 972, 1002, 1189, 1290, 1685
Sau3AI	GATC	6 cut(s)	206, 247, 496, 799, 1630, 1825
Sau96I	GGNCC	3 cut(s)	172, 928, 1858
SchI	GAGTC	3 cut(s)	272, 329, 1226
ScrFI	CCNGG	6 cut(s)	176, 288, 978, 1446, 1456, 1921
SduI	GDGCHC	6 cut(s)	8, 543, 693, 1134, 1264, 1352
SfaNI	GCATC	4 cut(s)	493, 1090, 1168, 1297
SfcI	CTRYAG	2 cut(s)	509, 1578
SfuI	TTCGAA	1 cut(s)	1316
SinI	GGWCC	2 cut(s)	172, 1858
SmlI	CTYRAG	4 cut(s)	602, 805, 939, 1058
SmoI	CTYRAG	4 cut(s)	602, 805, 939, 1058
SsiI	CCGC	8 cut(s)	41, 90, 968, 1001, 1157, 1191, 1425, 1501
SspMI	CTAG	4 cut(s)	771, 797, 1286, 1899
SstI	GAGCTC	2 cut(s)	693, 1134
StyD4I	CCNGG	6 cut(s)	174, 286, 976, 1444, 1454, 1919
StyI	CCWWGG	3 cut(s)	1052, 1821, 1898
TaaI	ACNGT	4 cut(s)	1105, 1606, 1621, 1655
TaiI	ACGT	2 cut(s)	1349, 1629
TaqI	TCGA	5 cut(s)	471, 535, 715, 1316, 1591
TatI	WGTACW	1 cut(s)	1338
TauI	GCSGC	2 cut(s)	971, 1004
TfiI	GAWTC	5 cut(s)	323, 329, 434, 842, 1586
Tru1I	TTAA	7 cut(s)	18, 419, 603, 614, 806, 1224, 1410
Tru9I	TTAA	7 cut(s)	18, 419, 603, 614, 806, 1224, 1410
TscAI	CASTG	5 cut(s)	232, 1075, 1491, 1660, 1762
TseFI	GTSAC	2 cut(s)	221, 1093
TseI	GCWGC	5 cut(s)	767, 971, 1188, 1289, 1684
Tsp45I	GTSAC	2 cut(s)	221, 1093
TspGWI	ACGGA	1 cut(s)	1721
TspRI	CASTG	5 cut(s)	232, 1075, 1491, 1660, 1762
Vha464I	CTTAAG	2 cut(s)	602, 805
VpaK11BI	GGWCC	2 cut(s)	172, 1858
XapI	RAATTY	3 cut(s)	547, 1312, 1889
XbaI	TCTAGA	1 cut(s)	796
XceI	RCATGY	1 cut(s)	895
XmaJI	CCTAGG	1 cut(s)	1898
XmiI	GTMKAC	1 cut(s)	1623
XspI	CTAG	4 cut(s)	771, 797, 1286, 1899

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.