Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr4

Orthogroup ID

OG0009955

Physical Location & Seq

Genomic Coordinates Reverse (-)

42877879 .. 42885287

Gene Structure 7409 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw4G019500.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2424 bp

ATGGCCGCCGGCGATACTTCATCTGTCTGGGACTGGGGCGATCTCCTCGACTTCACCGTCGACGACGACTTGACCATCGCATGGGGCTCCGCCGACCCGCCCAACCCGCCCGAGGCCAACCACCTGCCCCCGCCGGACGACCCGCCGGAGAATCCGAATCCGAGCCCCCCGGCGCCGGCGGCAAGGATAAGGAAGCGCGACCCGAGACTGGCGTGCTCCAACTTTCTGGCGGGTCACGTGCCGTGCGCGTGCCCGGAGGTGGACGAGAAAATGATGGAACTGGAGGAGGAGGAAGCTGGGCACGGGAAGAAGCGGGTCAGGACGGTTCGGGCCCCGCCCGGGACGGCCCGGTGTCAGGTCCCGACTTGTGGGGCCGACATTAAGGAGCTCAAAGGCTATCACCGCAGGCACAGAGTCTGCCTTGCCTGCGCCAATGCAACCACCGTCGTCCTCGGCGGCGACGCCAAGCGTTATTGTCAGCAGTGTGGCAAGTTCCATGTCTTATCTGATTTTGATGAAGGTAAGCGGAGCTGTCGAAGAAAGTTAGAGCGTCACAATAACAGAAGAAGAAGAAAACCGAGTGATTCAAAAGCAGGGAAGGAATCTCAAAGGGAAGTTCAAACTGAAGGTGGCAATCATGATGGTGAAGCAGGAGAAGACAGTTTACAGTTAAGCAGCCAGATAAATGAGAAGGAAGACTTGGTGGAGTCAGAAGGTGGGGGTATTTCTGCCCTCTTTTCAACGCCTAATTCCCAGAATGTCGGCAGTGATGGTGTTGCATCGGGCCTGACTTCTGGTGATACCCAAATGGATGGAAGAAAACATGATTCCAATCACTCTCTTTCTCCGCCACAGGGCGACAACAAAAGTGTCTACTCATCTATGTGTCCGACAGGTCGTATCTCATTCAAGCTCTATGATTGGAATCCAGCAGAATTCCCTAGAAGACTTCGGCACCAAATATTCCAATGGTTGGCTAGTATGCCGGTTGAGTTGGAGGGGTATATCCGTCCTGGATGTATTATCTTGACTGTTTTTATTGCAATGCCAAAGTTTATGTGGATGAAGTTACTTGATGATCCTGCATCGTATCTACATAACTTTGTTATCGTACCTGGAAGCATGCTATCGGGGAGGGGAAATATGCTTGTTTATCTCAATGACATGATTTTCCGTGTTGTAAAAGACGGAACTTCTGTAATAAAAGCCAAAGTGGAGGTGCGGGCCCCCAGGCTACATTATATTCATCCTACATGTTTTGAAGCAGGCAAGCCAATGGAGTTTTTTGTCTGTGGAAGTAATTTGTTACAACCCAAACTTAGGTTTCTTGTATCCTTCTCTGGAAAGTATCTGGCCGATAATTATGACCCGGAATCCTCTCATACTCAGATTGAAGGGGACAGCACTGCTGCTAATATAGATCATCAACTTTACAAGATACATGTGCCTCATACAGAAGCAACTAGTTTTGGTCCTGCGTTTATTGAGGTTGAAAATGAATCTGGGTTATCAAACTTTTTACCTGTACTCATTGGGAACAAAGAGATTTGTGCTGAAATGGAGACTATTCAAAAAAAATTAGAAGAATCTCTTTTTGTGCGAGGATCATCAGATGTTTCTTCCAGTGGTTCTCTGTTGACCTCTTGTGAAGCATCTTCACTCAGACACAGAGCATTTTCTGAAGTTATTTTAGATATAGCATGGCTTCTTAGAAAGCCCTCCTCAGAAAATGTCCAACAGATCATGACTTCTTCACAGGCACAAAGATTCAATAATTTATTGAACTTATTGATATTCTTCAAGTCAACAACCATACTGGAGAAAGTGTTAGAAAATTTGAACACTCTGATGGATAATGTAGAGATAAACAACCCCGATAGTGGCAGTATTGATGCTGATATGAGGCTATTACAAAAGTACATGGATTGTGCTCATGATATTCTTTGTCAAAAACTTCAAAGTTCTGGGGTTTCAGTTGTGGAGCCTGGAAGCTTGGTGCAGAAACAGGATCTTATTTCTCAAAGTCTAAGCTGCTTTCAGAGCAAACAACATTTTCCCATACACACTCAGGATACAGAGATTATTGTAGATGGTAAGATGGATGCGATGTTGGGTTCAACGTCTAATGAGAGAAGTGAGACTCTTCCACTTTTAAACAAAAAAGCAGCCACGAAAGCCAACCTTATCAAACAGGCTAACTGTGGTATTTCTTCTGGGGAGCTCCTAAGCTCTCGCTCTAGGCGAACATTCTTCGGATTTCGCCCCACTCTCTATGTAATTTCTGCCACTGCTATGTGTTTAGGAATTTGTGCGGTCGTCTTTCATCCTCATAAGGTTGGCGAATTAGCAGTAACAATACGCAGATGTCAGTTTTGTAATTCGGCCGAGGTGTCGCATCATTCAAGGTACCAATTAATTAAGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0006355 GO:0006950 GO:0007154 GO:0008150 GO:0009267 GO:0009605 GO:0009889 GO:0009987 GO:0009991 GO:0010468 GO:0010556 GO:0016604 GO:0016607 GO:0019219 GO:0019222 GO:0031323 GO:0031326 GO:0031667 GO:0031668 GO:0031669 GO:0031974 GO:0031981 GO:0033554 GO:0035874 GO:0040008 GO:0042594 GO:0042802 GO:0042803 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044451 GO:0044464 GO:0046983 GO:0048638 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051171 GO:0051252 GO:0051716 GO:0060255 GO:0065007 GO:0070013 GO:0071496 GO:0080090 GO:0120126 GO:1903506 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

SBP

Protein Analysis

807

Amino Acids

89.37

Weight (kDa)

6.38

Isoelectric Point (pI)

51.06

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
SBP	PF03110	118 - 192	8.3e-28	SBP domain
Ig_SPL7	PF26102	406 - 521	2.5e-37	SPL7-like, immunoglobulin-like domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009955)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G18830 AT5G18830 AT5G18830
fragaria_vesca	FvH4_4g16910 FvH4_4g16910 FvH4_4g16910 FvH4_4g16910
malus_domestica	MD13G1175800.v1.1 MD16G1177600.v1.1
prunus_persica	Prupe.1G144600_v2.0.a1
pyrus_communis	pycom13g15150 pycom16g14900
rosa_chinensis	RchiOBHm_Chr4g0420491
rosa_laevigata	RLG00000007757
rosa_roxburghii	Rroxscaffold_5G00363110
rosa_rugosa	Rorug04G0164300
rosa_samantha	Rh4AG225900 Rh4BG228600 Rh4CG240200 Rh4DG224300
rosa_wichuraiana	Rw4G019500

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	132
AasI	GACNNNNNNGTC	1 cut(s)	56
Acc36I	ACCTGC	1 cut(s)	132
Acc65I	GGTACC	1 cut(s)	2406
AccB1I	GGYRCC	3 cut(s)	172, 954, 2406
AccB7I	CCANNNNNTGG	2 cut(s)	81, 973
AccI	GTMKAC	2 cut(s)	60, 873
AccII	CGCG	2 cut(s)	198, 248
AclWI	GGATC	3 cut(s)	1073, 1612, 2016
AcoI	YGGCCR	3 cut(s)	3, 1353, 2382
AcsI	RAATTY	3 cut(s)	935, 1834, 2304
AcuI	CTGAAG	2 cut(s)	645, 1701
AcvI	CACGTG	1 cut(s)	238
AcyI	GRCGYC	2 cut(s)	173, 462
AfaI	GTAC	4 cut(s)	1113, 1527, 1919, 2408
AflIII	ACRYGT	2 cut(s)	1253, 1441
AhlI	ACTAGT	1 cut(s)	1463
AjnI	CCWGG	4 cut(s)	1012, 1114, 1229, 1984
AjuI	GAANNNNNNNTTGG	2 cut(s)	683, 715
AluBI	AGCT	8 cut(s)	296, 388, 531, 913, 1992, 2031, 2221, 2229
AluI	AGCT	8 cut(s)	296, 388, 531, 913, 1992, 2031, 2221, 2229
Alw21I	GWGCWC	4 cut(s)	218, 390, 1933, 2223
Alw26I	GTCTC	3 cut(s)	199, 1556, 2132
AlwI	GGATC	3 cut(s)	1073, 1612, 2016
AlwNI	CAGNNNCTG	1 cut(s)	417
Ama87I	CYCGRG	3 cut(s)	110, 202, 338
AoxI	GGCC	9 cut(s)	3, 114, 330, 345, 372, 784, 1224, 1353, 2382
ApaI	GGGCCC	2 cut(s)	334, 1228
ApeKI	GCWGC	4 cut(s)	675, 1409, 2031, 2165
ApoI	RAATTY	3 cut(s)	935, 1834, 2304
AseI	ATTAAT	1 cut(s)	2414
Asp718I	GGTACC	1 cut(s)	2406
AspLEI	GCGC	4 cut(s)	175, 198, 248, 431
AspS9I	GGNCC	9 cut(s)	330, 331, 346, 358, 372, 784, 1224, 1225, 1472
AsuC2I	CCSGG	6 cut(s)	170, 254, 339, 340, 349, 1370
AsuHPI	GGTGA	4 cut(s)	46, 392, 656, 809
AvaI	CYCGRG	3 cut(s)	110, 202, 338
AvaII	GGWCC	2 cut(s)	358, 1472
BaeGI	GKGCMC	4 cut(s)	254, 303, 334, 1228
BanI	GGYRCC	3 cut(s)	172, 954, 2406
BanII	GRGCYC	6 cut(s)	89, 167, 334, 390, 1228, 2223
BarI	GAAGNNNNNNTAC	2 cut(s)	648, 680
BbrPI	CACGTG	1 cut(s)	238
BbsI	GAAGAC	3 cut(s)	663, 702, 952
Bbv12I	GWGCWC	4 cut(s)	218, 390, 1933, 2223
BbvI	GCAGC	4 cut(s)	687, 1396, 2018, 2177
BccI	CCATC	8 cut(s)	83, 268, 635, 764, 806, 1843, 2084, 2092
BceAI	ACGGC	2 cut(s)	226, 360
BciT130I	CCWGG	4 cut(s)	1014, 1116, 1231, 1986
BciVI	GTATCC	2 cut(s)	1342, 2065
BcnI	CCSGG	6 cut(s)	170, 254, 339, 340, 349, 1370
BcoDI	GTCTC	3 cut(s)	199, 1556, 2132
BcuI	ACTAGT	1 cut(s)	1463
BfaI	CTAG	4 cut(s)	942, 978, 1464, 2238
BfoI	RGCGCY	1 cut(s)	176
BfuAI	ACCTGC	1 cut(s)	132
BfuI	GTATCC	2 cut(s)	1342, 2065
BisI	GCNGC	7 cut(s)	6, 180, 457, 676, 1410, 2032, 2166
BlsI	GCNGC	7 cut(s)	7, 181, 458, 677, 1411, 2033, 2167
Bme18I	GGWCC	2 cut(s)	358, 1472
BmeT110I	CYCGRG	3 cut(s)	110, 202, 338
BmgT120I	GGNCC	9 cut(s)	330, 331, 346, 358, 372, 784, 1224, 1225, 1472
BmrI	ACTGGG	1 cut(s)	43
BmsI	GCATC	6 cut(s)	788, 1094, 1661, 1882, 2092, 2404
BmuI	ACTGGG	1 cut(s)	43
BpiI	GAAGAC	3 cut(s)	663, 702, 952
BpmI	CTGGAG	2 cut(s)	302, 1838
Bpu10I	CCTNAGC	1 cut(s)	2225
BpuMI	CCSGG	6 cut(s)	170, 254, 339, 340, 349, 1370
BsaAI	YACGTR	1 cut(s)	238
BsaBI	GATNNNNATC	2 cut(s)	831, 924
BsaHI	GRCGYC	2 cut(s)	173, 462
BsaJI	CCNNGG	6 cut(s)	111, 168, 338, 451, 1229, 2385
BsaXI	ACNNNNNCTCC	2 cut(s)	1811, 1841
Bse118I	RCCGGY	3 cut(s)	8, 175, 985
Bse1I	ACTGG	5 cut(s)	38, 213, 285, 1623, 1821
Bse3DI	GCAATG	1 cut(s)	1050
Bse8I	GATNNNNATC	2 cut(s)	831, 924
BseBI	CCWGG	4 cut(s)	1014, 1116, 1231, 1986
BseDI	CCNNGG	6 cut(s)	111, 168, 338, 451, 1229, 2385
BseGI	GGATG	6 cut(s)	817, 1022, 1068, 1246, 2107, 2323
BseJI	GATNNNNATC	2 cut(s)	831, 924
BseMI	GCAATG	1 cut(s)	1050
BseMII	CTCAG	4 cut(s)	1400, 1675, 1737, 2081
BseNI	ACTGG	5 cut(s)	38, 213, 285, 1623, 1821
BseRI	GAGGAG	4 cut(s)	35, 299, 302, 1711
BseSI	GKGCMC	4 cut(s)	254, 303, 334, 1228
BseX3I	CGGCCG	1 cut(s)	2382
BseXI	GCAGC	4 cut(s)	687, 1396, 2018, 2177
BseYI	CCCAGC	1 cut(s)	296
BsgI	GTGCAG	1 cut(s)	2018
Bsh1236I	CGCG	2 cut(s)	198, 248
Bsh1285I	CGRYCG	2 cut(s)	2316, 2385
BshFI	GGCC	9 cut(s)	5, 116, 332, 347, 374, 786, 1226, 1355, 2384
BshNI	GGYRCC	3 cut(s)	172, 954, 2406
BsiEI	CGRYCG	2 cut(s)	2316, 2385
BsiHKAI	GWGCWC	4 cut(s)	218, 390, 1933, 2223
BsiHKCI	CYCGRG	3 cut(s)	110, 202, 338
BslFI	GGGAC	4 cut(s)	44, 344, 355, 1412
BsmAI	GTCTC	3 cut(s)	199, 1556, 2132
BsmFI	GGGAC	4 cut(s)	44, 344, 355, 1412
BsnI	GGCC	9 cut(s)	5, 116, 332, 347, 374, 786, 1226, 1355, 2384
BsoBI	CYCGRG	3 cut(s)	110, 202, 338
Bsp120I	GGGCCC	2 cut(s)	330, 1224
Bsp143I	GATC	6 cut(s)	40, 1078, 1420, 1604, 1740, 2008
BspANI	GGCC	9 cut(s)	5, 116, 332, 347, 374, 786, 1226, 1355, 2384
BspCNI	CTCAG	4 cut(s)	1399, 1674, 1736, 2080
BspFNI	CGCG	2 cut(s)	198, 248
BspHI	TCATGA	3 cut(s)	637, 1743, 1933
BspMI	ACCTGC	1 cut(s)	132
BspPI	GGATC	3 cut(s)	1073, 1612, 2016
BspT107I	GGYRCC	3 cut(s)	172, 954, 2406
BsrDI	GCAATG	1 cut(s)	1050
BsrFI	RCCGGY	3 cut(s)	8, 175, 985
BsrI	ACTGG	5 cut(s)	38, 213, 285, 1623, 1821
BssAI	RCCGGY	3 cut(s)	8, 175, 985
BssECI	CCNNGG	6 cut(s)	111, 168, 338, 451, 1229, 2385
BssMI	GATC	6 cut(s)	40, 1078, 1420, 1604, 1740, 2008
BssNI	GRCGYC	2 cut(s)	173, 462
Bst2UI	CCWGG	4 cut(s)	1014, 1116, 1231, 1986
Bst4CI	ACNGT	7 cut(s)	58, 325, 445, 662, 669, 1033, 2201
Bst6I	CTCTTC	1 cut(s)	2148
BstACI	GRCGYC	2 cut(s)	173, 462
BstBAI	YACGTR	1 cut(s)	238
BstDEI	CTNAG	8 cut(s)	1319, 1386, 1661, 1709, 1723, 2027, 2067, 2225
BstF5I	GGATG	6 cut(s)	817, 1022, 1068, 1246, 2107, 2323
BstFNI	CGCG	2 cut(s)	198, 248
BstH2I	RGCGCY	1 cut(s)	176
BstHHI	GCGC	4 cut(s)	175, 198, 248, 431
BstKTI	GATC	6 cut(s)	43, 1081, 1423, 1607, 1743, 2011
BstMAI	GTCTC	3 cut(s)	199, 1556, 2132
BstMBI	GATC	6 cut(s)	40, 1078, 1420, 1604, 1740, 2008
BstMCI	CGRYCG	2 cut(s)	2316, 2385
BstMWI	GCNNNNNNNGC	6 cut(s)	106, 179, 402, 426, 2040, 2174
BstNI	CCWGG	4 cut(s)	1014, 1116, 1231, 1986
BstNSI	RCATGY	3 cut(s)	1126, 1257, 1445
BstSLI	GKGCMC	4 cut(s)	254, 303, 334, 1228
BstUI	CGCG	2 cut(s)	198, 248
BstV1I	GCAGC	4 cut(s)	687, 1396, 2018, 2177
BstV2I	GAAGAC	3 cut(s)	663, 702, 952
BstX2I	RGATCY	1 cut(s)	2008
BstXI	CCANNNNNNTGG	2 cut(s)	226, 812
BstYI	RGATCY	1 cut(s)	2008
BstZI	CGGCCG	1 cut(s)	2382
BsuI	GTATCC	2 cut(s)	1342, 2065
BsuRI	GGCC	9 cut(s)	5, 116, 332, 347, 374, 786, 1226, 1355, 2384
BtgZI	GCGATG	2 cut(s)	61, 2120
BtsCI	GGATG	6 cut(s)	817, 1022, 1068, 1246, 2107, 2323
BtsI	GCAGTG	4 cut(s)	488, 772, 1404, 2286
BtsIMutI	CAGTG	5 cut(s)	488, 772, 1404, 1630, 2286
BveI	ACCTGC	1 cut(s)	132
CaiI	CAGNNNCTG	1 cut(s)	417
CciI	TCATGA	3 cut(s)	637, 1743, 1933
CfoI	GCGC	4 cut(s)	175, 198, 248, 431
Cfr10I	RCCGGY	3 cut(s)	8, 175, 985
Cfr13I	GGNCC	9 cut(s)	330, 331, 346, 358, 372, 784, 1224, 1225, 1472
Cfr9I	CCCGGG	1 cut(s)	338
CseI	GACGC	2 cut(s)	470, 539
Csp6I	GTAC	4 cut(s)	1112, 1526, 1918, 2407
CviQI	GTAC	4 cut(s)	1112, 1526, 1918, 2407
DdeI	CTNAG	8 cut(s)	1319, 1386, 1661, 1709, 1723, 2027, 2067, 2225
DinI	GGCGCC	1 cut(s)	174
DpnI	GATC	6 cut(s)	42, 1080, 1422, 1606, 1742, 2010
DpnII	GATC	6 cut(s)	40, 1078, 1420, 1604, 1740, 2008
DraI	TTTAAA	1 cut(s)	2154
DrdI	GACNNNNNNGTC	1 cut(s)	56
DseDI	GACNNNNNNGTC	1 cut(s)	56
EaeI	YGGCCR	3 cut(s)	3, 1353, 2382
EagI	CGGCCG	1 cut(s)	2382
Eam1104I	CTCTTC	1 cut(s)	2148
EarI	CTCTTC	1 cut(s)	2148
EciI	GGCGGA	2 cut(s)	79, 837
Ecl136II	GAGCTC	2 cut(s)	388, 2221
EclXI	CGGCCG	1 cut(s)	2382
Eco24I	GRGCYC	6 cut(s)	89, 167, 334, 390, 1228, 2223
Eco47I	GGWCC	2 cut(s)	358, 1472
Eco52I	CGGCCG	1 cut(s)	2382
Eco53kI	GAGCTC	2 cut(s)	388, 2221
Eco57I	CTGAAG	2 cut(s)	645, 1701
Eco72I	CACGTG	1 cut(s)	238
Eco88I	CYCGRG	3 cut(s)	110, 202, 338
EcoICRI	GAGCTC	2 cut(s)	388, 2221
EcoO109I	RGGNCCY	3 cut(s)	331, 358, 1225
EcoRI	GAATTC	1 cut(s)	935
EcoRII	CCWGG	4 cut(s)	1012, 1114, 1229, 1984
EcoT38I	GRGCYC	6 cut(s)	89, 167, 334, 390, 1228, 2223
EgeI	GGCGCC	1 cut(s)	174
EheI	GGCGCC	1 cut(s)	174
FalI	AAGNNNNNCTT	6 cut(s)	683, 715, 1575, 1607, 2166, 2198
FaqI	GGGAC	4 cut(s)	44, 344, 355, 1412
FauI	CCCGC	8 cut(s)	105, 114, 138, 150, 223, 306, 342, 1215
FblI	GTMKAC	2 cut(s)	60, 873
Fnu4HI	GCNGC	7 cut(s)	6, 180, 457, 676, 1410, 2032, 2166
FokI	GGATG	6 cut(s)	824, 1029, 1075, 1233, 2114, 2310
FriOI	GRGCYC	6 cut(s)	89, 167, 334, 390, 1228, 2223
Fsp4HI	GCNGC	7 cut(s)	6, 180, 457, 676, 1410, 2032, 2166
FspBI	CTAG	4 cut(s)	942, 978, 1464, 2238
GlaI	GCGC	4 cut(s)	174, 197, 247, 430
GluI	GCNGC	7 cut(s)	6, 180, 457, 676, 1410, 2032, 2166
GsaI	CCCAGC	1 cut(s)	300
GsuI	CTGGAG	2 cut(s)	302, 1838
HaeII	RGCGCY	1 cut(s)	176
HaeIII	GGCC	9 cut(s)	5, 116, 332, 347, 374, 786, 1226, 1355, 2384
HgaI	GACGC	2 cut(s)	470, 539
HhaI	GCGC	4 cut(s)	175, 198, 248, 431
Hin1I	GRCGYC	2 cut(s)	173, 462
Hin6I	GCGC	4 cut(s)	173, 196, 246, 429
HinP1I	GCGC	4 cut(s)	173, 196, 246, 429
HincII	GTYRAC	3 cut(s)	61, 1638, 1806
HindII	GTYRAC	3 cut(s)	61, 1638, 1806
HindIII	AAGCTT	1 cut(s)	1990
HphI	GGTGA	4 cut(s)	46, 392, 656, 809
Hpy166II	GTNNAC	6 cut(s)	61, 262, 665, 874, 1638, 1806
Hpy188III	TCNNGA	8 cut(s)	319, 361, 638, 1027, 1341, 1744, 1934, 2069
Hpy8I	GTNNAC	6 cut(s)	61, 262, 665, 874, 1638, 1806
Hpy99I	CGWCG	5 cut(s)	62, 65, 68, 449, 464
HpyAV	CCTTC	7 cut(s)	512, 592, 620, 685, 707, 1345, 1388
HpyCH4III	ACNGT	7 cut(s)	58, 325, 445, 662, 669, 1033, 2201
HpyCH4IV	ACGT	2 cut(s)	237, 2120
HpyCH4V	TGCA	5 cut(s)	437, 779, 1043, 1085, 1999
HpyF10VI	GCNNNNNNNGC	6 cut(s)	106, 179, 402, 426, 2040, 2174
HpyF3I	CTNAG	8 cut(s)	1319, 1386, 1661, 1709, 1723, 2027, 2067, 2225
HpySE526I	ACGT	2 cut(s)	237, 2120
Hsp92I	GRCGYC	2 cut(s)	173, 462
HspAI	GCGC	4 cut(s)	173, 196, 246, 429
KasI	GGCGCC	1 cut(s)	172
KpnI	GGTACC	1 cut(s)	2410
KroI	GCCGGC	2 cut(s)	8, 175
KroNI	GCCGGC	2 cut(s)	10, 177
Kzo9I	GATC	6 cut(s)	40, 1078, 1420, 1604, 1740, 2008
LmnI	GCTCC	7 cut(s)	92, 221, 385, 528, 1981, 2218, 2226
Lsp1109I	GCAGC	4 cut(s)	687, 1396, 2018, 2177
LweI	GCATC	6 cut(s)	788, 1094, 1661, 1882, 2092, 2404
MaeI	CTAG	4 cut(s)	942, 978, 1464, 2238
MaeII	ACGT	2 cut(s)	237, 2120
MaeIII	GTNAC	5 cut(s)	233, 551, 1068, 1305, 2350
MalI	GATC	6 cut(s)	42, 1080, 1422, 1606, 1742, 2010
MboI	GATC	6 cut(s)	40, 1078, 1420, 1604, 1740, 2008
MflI	RGATCY	1 cut(s)	2008
Mly113I	GGCGCC	1 cut(s)	173
MlyI	GAGTC	3 cut(s)	423, 716, 2134
MmeI	TCCRAC	4 cut(s)	243, 914, 975, 1759
MreI	CGCCGGCG	2 cut(s)	8, 175
MroNI	GCCGGC	2 cut(s)	8, 175
MseI	TTAA	5 cut(s)	381, 671, 2153, 2414, 2418
MslI	CAYNNNNRTG	4 cut(s)	642, 883, 1847, 2291
MvaI	CCWGG	4 cut(s)	1014, 1116, 1231, 1986
MvnI	CGCG	2 cut(s)	198, 248
MwoI	GCNNNNNNNGC	6 cut(s)	106, 179, 402, 426, 2040, 2174
NaeI	GCCGGC	2 cut(s)	10, 177
NarI	GGCGCC	1 cut(s)	173
NciI	CCSGG	6 cut(s)	170, 254, 339, 340, 349, 1370
NdeII	GATC	6 cut(s)	40, 1078, 1420, 1604, 1740, 2008
NgoMIV	GCCGGC	2 cut(s)	8, 175
NmeAIII	GCCGAG	2 cut(s)	432, 2410
NmuCI	GTSAC	2 cut(s)	233, 551
NspI	RCATGY	3 cut(s)	1126, 1257, 1445
PacI	TTAATTAA	1 cut(s)	2418
PaeI	GCATGC	1 cut(s)	1126
PagI	TCATGA	3 cut(s)	637, 1743, 1933
PaqCI	CACCTGC	1 cut(s)	132
PciI	ACATGT	2 cut(s)	1253, 1441
PcsI	WCGNNNNNNNCGW	2 cut(s)	54, 2239
PdiI	GCCGGC	2 cut(s)	10, 177
PflMI	CCANNNNNTGG	2 cut(s)	81, 973
PfoI	TCCNGGA	1 cut(s)	1012
PkrI	GCNGC	7 cut(s)	7, 181, 458, 677, 1411, 2033, 2167
PleI	GAGTC	3 cut(s)	422, 715, 2134
PluTI	GGCGCC	1 cut(s)	176
PmaCI	CACGTG	1 cut(s)	238
PmlI	CACGTG	1 cut(s)	238
PpsI	GAGTC	3 cut(s)	422, 715, 2134
Ppu21I	YACGTR	1 cut(s)	238
PpuMI	RGGWCCY	1 cut(s)	358
PscI	ACATGT	2 cut(s)	1253, 1441
PshBI	ATTAAT	1 cut(s)	2414
Psp124BI	GAGCTC	2 cut(s)	390, 2223
Psp5II	RGGWCCY	1 cut(s)	358
Psp6I	CCWGG	4 cut(s)	1012, 1114, 1229, 1984
PspCI	CACGTG	1 cut(s)	238
PspFI	CCCAGC	1 cut(s)	296
PspGI	CCWGG	4 cut(s)	1012, 1114, 1229, 1984
PspOMI	GGGCCC	2 cut(s)	330, 1224
PspPI	GGNCC	9 cut(s)	330, 331, 346, 358, 372, 784, 1224, 1225, 1472
PspPPI	RGGWCCY	1 cut(s)	358
PstNI	CAGNNNCTG	1 cut(s)	417
PsuI	RGATCY	1 cut(s)	2008
RsaI	GTAC	4 cut(s)	1113, 1527, 1919, 2408
RsaNI	GTAC	4 cut(s)	1112, 1526, 1918, 2407
RseI	CAYNNNNRTG	4 cut(s)	642, 883, 1847, 2291
SacI	GAGCTC	2 cut(s)	390, 2223
SalI	GTCGAC	1 cut(s)	59
SaqAI	TTAA	5 cut(s)	381, 671, 2153, 2414, 2418
SatI	GCNGC	7 cut(s)	6, 180, 457, 676, 1410, 2032, 2166
Sau3AI	GATC	6 cut(s)	40, 1078, 1420, 1604, 1740, 2008
Sau96I	GGNCC	9 cut(s)	330, 331, 346, 358, 372, 784, 1224, 1225, 1472
SchI	GAGTC	3 cut(s)	423, 716, 2134
SfaNI	GCATC	6 cut(s)	788, 1094, 1661, 1882, 2092, 2404
SfoI	GGCGCC	1 cut(s)	174
SgrAI	CRCCGGYG	2 cut(s)	8, 175
SgrDI	CGTCGACG	1 cut(s)	59
SinI	GGWCC	2 cut(s)	358, 1472
SmaI	CCCGGG	1 cut(s)	340
SmiMI	CAYNNNNRTG	4 cut(s)	642, 883, 1847, 2291
SpeI	ACTAGT	1 cut(s)	1463
SphI	GCATGC	1 cut(s)	1126
SspDI	GGCGCC	1 cut(s)	172
SspI	AATATT	1 cut(s)	963
SspMI	CTAG	4 cut(s)	942, 978, 1464, 2238
SstI	GAGCTC	2 cut(s)	390, 2223
TaaI	ACNGT	7 cut(s)	58, 325, 445, 662, 669, 1033, 2201
TaiI	ACGT	2 cut(s)	240, 2123
TaqI	TCGA	3 cut(s)	48, 60, 535
TatI	WGTACW	2 cut(s)	1525, 1917
TauI	GCSGC	3 cut(s)	8, 182, 459
Tru1I	TTAA	5 cut(s)	381, 671, 2153, 2414, 2418
Tru9I	TTAA	5 cut(s)	381, 671, 2153, 2414, 2418
TscAI	CASTG	5 cut(s)	488, 772, 1411, 1630, 2293
TseFI	GTSAC	2 cut(s)	233, 551
TseI	GCWGC	4 cut(s)	675, 1409, 2031, 2165
Tsp45I	GTSAC	2 cut(s)	233, 551
TspDTI	ATGAA	6 cut(s)	9, 531, 1079, 1235, 1512, 2312
TspGWI	ACGGA	3 cut(s)	998, 1163, 1203
TspMI	CCCGGG	1 cut(s)	338
TspRI	CASTG	5 cut(s)	488, 772, 1411, 1630, 2293
Van91I	CCANNNNNTGG	2 cut(s)	81, 973
VpaK11BI	GGWCC	2 cut(s)	358, 1472
VspI	ATTAAT	1 cut(s)	2414
XapI	RAATTY	3 cut(s)	935, 1834, 2304
XceI	RCATGY	3 cut(s)	1126, 1257, 1445
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1056
XmaI	CCCGGG	1 cut(s)	338
XmiI	GTMKAC	2 cut(s)	60, 873
XspI	CTAG	4 cut(s)	942, 978, 1464, 2238

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.