Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr2

Orthogroup ID

OG0009955

Physical Location & Seq

Genomic Coordinates Forward (+)

20695643 .. 20701989

Gene Structure 6347 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000007757

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2481 bp

ATGCAAAAGTCCCCCCCTCCTCTTTCCCCAACCCAATCACAACGGCAGCCTTTAGACCAACCTAGGGTTTCTCACATTCCTCAACCGCCCATGGCCGCCGGTGACACTTCATCTGTCTGGGACTGGGGCGATCTCCTCGACTTCACCGTCGACGACGACTTGGCCATCTCATGGGGCTCCGCCGACCCGCCCAACCCTCCCGAGGCCCACCACCTGCCTCCGCCGGACGACCCGCCGGAGAATCCGAATCCGAATCCGAGCCCCCCCGCGCCGGCGGCAAGGATAAGGAAGCGCGACCCGAGACTGGCGTGCTCCAACTTTCTGGCGGGTCACGTGCCGTGCGCGTGCCCGGAGGTGGACGAGAAAATGATGGAACTGGAGGAGGAGGAAGCCGGGCACGGGAAGAAGCGGGTCAGGACGGTTCGGGCCCCGCCCGGGACGGCCCGGTGTCAGGTCCCGACTTGTGGGGCCGACATCAAGGAGCTCAAAGGCTATCACCGCAGGCACAGAGTCTGCCTTGCCTGCGCCAATGCCACCACCGTCGTCCTCGGCGGCGAGACCAAGCGTTATTGTCAGCAGTGTGGCAAGTTCCATGTCTTATCTGATTTTGATGAAGGTAAGCGGAGCTGTCGAAGAAAATTAGAGCGTCACAATAACAGAAGAAGAAGAAAACCGAGTGATTCAAAAGCAGGGAAGGAATCCCAAAAGGAAGTTCAAACTGAAGGTGGCAATCATGATGGTGAAGCAGGAGAGGACAGTTTACAGTTAAGCTGCCAGATAAATGAGAAGGAAGACTTGGTGGAGTCAGAAGGTGGGGGTATTTCTACCCTCTTTTCAATGCCTAATTCCCAGAATGTTGGCAGTGATGGTGTTGCATCGGCCCTGACTTCTGGTGATACCCAAATGGATGGAAGAAAACATGATTCCAATCACTCTCTTTCTCCGCCACAGTGCGACAACAAAAGTGTCTACTCATCTATGTGTCCGACAGGTCGTATCTCATTCAAGCTCTATGATTGGAATCCAGCAGAATTCCCTAGAAGACTTCGGCACCAAATATTCCAATGGTTGGCTAGTATGCCGGTTGAGTTGGAGGGGTATATCCGTCCTGGATGTACTATCTTGACTGTTTTTATTGCAATGCCAAAGTTTATGTGGATGAAGTTACTTGATGATCCTGCATCGTATCTACATAACTTTGTTATCGTACCTGGAAGGATGCTATCCGGGAGGGGAAATATGCTTGTTTATCTCAATGACATGATTTTCCGTGTTGTAAAAGATGGGACTTCTGTAATAAAAGCCAAAGTGGAGGTGCGGGCCCCCAGGCTACATTATATTCACCCTACATGTTTTGAAGCAGGCAAGCCAATGGAGTTTTTTGTCTGTGGAAGTAATTTGTTACAACCCAAACTTAGGTTTCTTGTATCCTTCTCTGGAAAGTATCTGGTCGATAATTATAATCCGGAATCCTCTCATACTCAGATTGAAGGGGACAGCACTGCTGGTAATATAGATCATCAACTTTACAAGATACATGTGCCTCGTACAGAAGCAACTAGTTTTGGTCCTGCGTTTATTGAGGTTGAAAATGAATCTGGGTTATCAAACTTTTTACCTGTACTCATTGGGAACAAAGAGATTTGTGCTGAAATGGAGACTATTCAAAAAAGATTAGAAGAATCTCTTTTTGTGCGAGGATCATCAGACGTTTCTTCCAGTGGTTCTCTGTTGACCTCTTGTGAAGCATCTTCACTCAGACACAGAGCATTTTCTGAAGTTATTTTAGATATAGCATGGCTTCTTAGAAAGCCCTCCTCAGAAAATGTCCAACAGATCATGACTTCTTCACAGGCACAAAGATTCAATAATTTATTGAACTTATTGATATTCTTCAAGTCAACAACCATACTGGAGAAAGTGTTCGAAAATCTGAACACTCTGATGGATAATGTAGAGATAAACAACCACGATAGTGGCAGTATTGATGCTGATATGAGGCTATTACAAAAGTACATGGATTGTGCTCGTGGTATTCTCCGTCAGAAACTTCAAAGTTCTGGGGTTTCAGTTGTGGAGCCTGGAAGCTTAGTGCAGAAAGAGGATCTAATTTCTCAAAGTCTAAGCTGCTTTCAGAGCAAACAACATTTTCCCAAACACACTCAGGATACAGAGATTATTGTAGATGGTAAGATGGATGTGATGTTGGGTTCAACATCTAATGAGAGAAGTGAGACTCTTCCGCTTTTAAACAAAAAAGCAGCCACGAAAGCCAACCTTATCAAACAGCCTAACTGTGGTATTTCTTCTGGGGAGCTCCTAAGCTCTCGCTCTAGGCGAACATTCTTGGGATTTCGCCCCACTCTCTATGTAATTTCTGCCACAGCTATGTGTTTAGGAATTTGTGCGGTTGTCTTTCATCCTCACAAGGTTGGCGAATTAGCAGTAACAATACGCAGGTGTCTATTTGACAAGATTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0006355 GO:0006950 GO:0007154 GO:0008150 GO:0009267 GO:0009605 GO:0009889 GO:0009987 GO:0009991 GO:0010468 GO:0010556 GO:0016604 GO:0016607 GO:0019219 GO:0019222 GO:0031323 GO:0031326 GO:0031667 GO:0031668 GO:0031669 GO:0031974 GO:0031981 GO:0033554 GO:0035874 GO:0040008 GO:0042594 GO:0042802 GO:0042803 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044451 GO:0044464 GO:0046983 GO:0048638 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051171 GO:0051252 GO:0051716 GO:0060255 GO:0065007 GO:0070013 GO:0071496 GO:0080090 GO:0120126 GO:1903506 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

SBP

Protein Analysis

827

Amino Acids

91.83

Weight (kDa)

7.1

Isoelectric Point (pI)

55.31

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
SBP	PF03110	150 - 224	5.2e-28	SBP domain
Ig_SPL7	PF26102	438 - 553	3.6e-37	SPL7-like, immunoglobulin-like domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009955)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G18830 AT5G18830 AT5G18830
fragaria_vesca	FvH4_4g16910 FvH4_4g16910 FvH4_4g16910 FvH4_4g16910
malus_domestica	MD13G1175800.v1.1 MD16G1177600.v1.1
prunus_persica	Prupe.1G144600_v2.0.a1
pyrus_communis	pycom13g15150 pycom16g14900
rosa_chinensis	RchiOBHm_Chr4g0420491
rosa_laevigata	RLG00000007757
rosa_roxburghii	Rroxscaffold_5G00363110
rosa_rugosa	Rorug04G0164300
rosa_samantha	Rh4AG225900 Rh4BG228600 Rh4CG240200 Rh4DG224300
rosa_wichuraiana	Rw4G019500

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1461
AarI	CACCTGC	2 cut(s)	222, 2448
AasI	GACNNNNNNGTC	1 cut(s)	146
Acc36I	ACCTGC	2 cut(s)	222, 2448
AccB1I	GGYRCC	1 cut(s)	1050
AccB7I	CCANNNNNTGG	2 cut(s)	171, 1069
AccI	GTMKAC	2 cut(s)	150, 969
AccII	CGCG	3 cut(s)	269, 294, 344
AccIII	TCCGGA	1 cut(s)	1465
AclWI	GGATC	3 cut(s)	1169, 1708, 2112
AcoI	YGGCCR	2 cut(s)	93, 162
AcsI	RAATTY	2 cut(s)	1031, 2400
AcuI	CTGAAG	2 cut(s)	741, 1797
AcvI	CACGTG	1 cut(s)	334
AfaI	GTAC	5 cut(s)	1117, 1209, 1549, 1623, 2015
AflIII	ACRYGT	2 cut(s)	1349, 1537
AhlI	ACTAGT	1 cut(s)	1559
AjnI	CCWGG	4 cut(s)	1108, 1210, 1325, 2080
AjuI	GAANNNNNNNTTGG	4 cut(s)	696, 728, 779, 811
AleI	CACNNNNGTG	1 cut(s)	1974
AloI	GAACNNNNNNTCC	2 cut(s)	1907, 1939
AluBI	AGCT	9 cut(s)	484, 627, 771, 1009, 2088, 2127, 2317, 2325, 2387
AluI	AGCT	9 cut(s)	484, 627, 771, 1009, 2088, 2127, 2317, 2325, 2387
Alw21I	GWGCWC	4 cut(s)	314, 486, 2029, 2319
Alw26I	GTCTC	4 cut(s)	295, 551, 1652, 2228
AlwI	GGATC	3 cut(s)	1169, 1708, 2112
AlwNI	CAGNNNCTG	1 cut(s)	513
Ama87I	CYCGRG	3 cut(s)	200, 298, 434
Aor13HI	TCCGGA	1 cut(s)	1465
AoxI	GGCC	8 cut(s)	93, 162, 204, 426, 441, 468, 879, 1320
ApaI	GGGCCC	2 cut(s)	430, 1324
ApeKI	GCWGC	4 cut(s)	46, 771, 2127, 2261
ApoI	RAATTY	2 cut(s)	1031, 2400
Asp700I	GAANNNNTTC	1 cut(s)	1922
AspA2I	CCTAGG	1 cut(s)	62
AspLEI	GCGC	4 cut(s)	271, 294, 344, 527
AsuC2I	CCSGG	6 cut(s)	350, 394, 435, 436, 445, 1228
AsuHPI	GGTGA	6 cut(s)	113, 136, 488, 752, 905, 1334
AsuII	TTCGAA	1 cut(s)	1926
AvaI	CYCGRG	3 cut(s)	200, 298, 434
AvaII	GGWCC	2 cut(s)	454, 1568
AvrII	CCTAGG	1 cut(s)	62
BaeGI	GKGCMC	4 cut(s)	350, 399, 430, 1324
BalI	TGGCCA	1 cut(s)	164
BanI	GGYRCC	1 cut(s)	1050
BanII	GRGCYC	6 cut(s)	179, 263, 430, 486, 1324, 2319
BauI	CACGAG	1 cut(s)	2028
BbrPI	CACGTG	1 cut(s)	334
BbsI	GAAGAC	2 cut(s)	798, 1048
Bbv12I	GWGCWC	4 cut(s)	314, 486, 2029, 2319
BbvI	GCAGC	4 cut(s)	58, 758, 2114, 2273
BccI	CCATC	9 cut(s)	173, 364, 731, 860, 902, 1277, 1939, 2180, 2188
BceAI	ACGGC	3 cut(s)	59, 322, 456
BciT130I	CCWGG	4 cut(s)	1110, 1212, 1327, 2082
BciVI	GTATCC	2 cut(s)	1438, 2161
BcnI	CCSGG	6 cut(s)	350, 394, 435, 436, 445, 1228
BcoDI	GTCTC	4 cut(s)	295, 551, 1652, 2228
BcuI	ACTAGT	1 cut(s)	1559
BfaI	CTAG	5 cut(s)	63, 1038, 1074, 1560, 2334
BfuAI	ACCTGC	2 cut(s)	222, 2448
BfuI	GTATCC	2 cut(s)	1438, 2161
BisI	GCNGC	7 cut(s)	47, 96, 276, 553, 772, 2128, 2262
BlnI	CCTAGG	1 cut(s)	62
BlsI	GCNGC	7 cut(s)	48, 97, 277, 554, 773, 2129, 2263
Bme18I	GGWCC	2 cut(s)	454, 1568
BmeT110I	CYCGRG	3 cut(s)	200, 298, 434
BmiI	GGNNCC	9 cut(s)	178, 428, 429, 456, 469, 1052, 1322, 1323, 2079
BmrI	ACTGGG	1 cut(s)	133
BmsI	GCATC	5 cut(s)	884, 1190, 1209, 1757, 1978
BmuI	ACTGGG	1 cut(s)	133
BpiI	GAAGAC	2 cut(s)	798, 1048
BpmI	CTGGAG	2 cut(s)	398, 1934
Bpu10I	CCTNAGC	1 cut(s)	2321
Bpu14I	TTCGAA	1 cut(s)	1926
BpuMI	CCSGG	6 cut(s)	350, 394, 435, 436, 445, 1228
BsaAI	YACGTR	1 cut(s)	334
BsaBI	GATNNNNATC	2 cut(s)	927, 1020
BsaI	GGTCTC	1 cut(s)	551
BsaJI	CCNNGG	6 cut(s)	62, 90, 201, 434, 547, 1325
BsaWI	WCCGGW	1 cut(s)	1465
BsaXI	ACNNNNNCTCC	2 cut(s)	1907, 1937
Bse118I	RCCGGY	3 cut(s)	98, 271, 1081
Bse1I	ACTGG	5 cut(s)	128, 309, 381, 1719, 1917
Bse3DI	GCAATG	1 cut(s)	1146
Bse8I	GATNNNNATC	2 cut(s)	927, 1020
BseAI	TCCGGA	1 cut(s)	1465
BseBI	CCWGG	4 cut(s)	1110, 1212, 1327, 2082
BseDI	CCNNGG	6 cut(s)	62, 90, 201, 434, 547, 1325
BseGI	GGATG	6 cut(s)	913, 1118, 1164, 1224, 2203, 2419
BseJI	GATNNNNATC	2 cut(s)	927, 1020
BseMI	GCAATG	1 cut(s)	1146
BseMII	CTCAG	4 cut(s)	1496, 1771, 1833, 2177
BseNI	ACTGG	5 cut(s)	128, 309, 381, 1719, 1917
BseRI	GAGGAG	5 cut(s)	9, 125, 395, 398, 1807
BseSI	GKGCMC	4 cut(s)	350, 399, 430, 1324
BseXI	GCAGC	4 cut(s)	58, 758, 2114, 2273
BsgI	GTGCAG	1 cut(s)	2114
Bsh1236I	CGCG	3 cut(s)	269, 294, 344
BshFI	GGCC	8 cut(s)	95, 164, 206, 428, 443, 470, 881, 1322
BshNI	GGYRCC	1 cut(s)	1050
BsiHKAI	GWGCWC	4 cut(s)	314, 486, 2029, 2319
BsiHKCI	CYCGRG	3 cut(s)	200, 298, 434
BslFI	GGGAC	5 cut(s)	134, 440, 451, 1300, 1508
BsmAI	GTCTC	4 cut(s)	295, 551, 1652, 2228
BsmFI	GGGAC	5 cut(s)	134, 440, 451, 1300, 1508
BsnI	GGCC	8 cut(s)	95, 164, 206, 428, 443, 470, 881, 1322
Bso31I	GGTCTC	1 cut(s)	551
BsoBI	CYCGRG	3 cut(s)	200, 298, 434
Bsp119I	TTCGAA	1 cut(s)	1926
Bsp120I	GGGCCC	2 cut(s)	426, 1320
Bsp13I	TCCGGA	1 cut(s)	1465
Bsp143I	GATC	6 cut(s)	130, 1174, 1516, 1700, 1836, 2104
Bsp19I	CCATGG	1 cut(s)	90
BspANI	GGCC	8 cut(s)	95, 164, 206, 428, 443, 470, 881, 1322
BspCNI	CTCAG	4 cut(s)	1495, 1770, 1832, 2176
BspEI	TCCGGA	1 cut(s)	1465
BspFNI	CGCG	3 cut(s)	269, 294, 344
BspHI	TCATGA	2 cut(s)	733, 1839
BspLI	GGNNCC	9 cut(s)	178, 428, 429, 456, 469, 1052, 1322, 1323, 2079
BspMI	ACCTGC	2 cut(s)	222, 2448
BspPI	GGATC	3 cut(s)	1169, 1708, 2112
BspT104I	TTCGAA	1 cut(s)	1926
BspT107I	GGYRCC	1 cut(s)	1050
BspTNI	GGTCTC	1 cut(s)	551
BsrDI	GCAATG	1 cut(s)	1146
BsrFI	RCCGGY	3 cut(s)	98, 271, 1081
BsrI	ACTGG	5 cut(s)	128, 309, 381, 1719, 1917
BssAI	RCCGGY	3 cut(s)	98, 271, 1081
BssECI	CCNNGG	6 cut(s)	62, 90, 201, 434, 547, 1325
BssMI	GATC	6 cut(s)	130, 1174, 1516, 1700, 1836, 2104
BssSI	CACGAG	1 cut(s)	2028
BssT1I	CCWWGG	2 cut(s)	62, 90
Bst2BI	CACGAG	1 cut(s)	2028
Bst2UI	CCWGG	4 cut(s)	1110, 1212, 1327, 2082
Bst4CI	ACNGT	8 cut(s)	148, 421, 541, 758, 765, 951, 1129, 2297
Bst6I	CTCTTC	1 cut(s)	2244
BstBAI	YACGTR	1 cut(s)	334
BstBI	TTCGAA	1 cut(s)	1926
BstC8I	GCNNGC	8 cut(s)	273, 310, 346, 503, 523, 1320, 1363, 1367
BstDEI	CTNAG	9 cut(s)	1415, 1482, 1757, 1805, 1819, 2089, 2123, 2163, 2321
BstDSI	CCRYGG	1 cut(s)	90
BstF5I	GGATG	6 cut(s)	913, 1118, 1164, 1224, 2203, 2419
BstFNI	CGCG	3 cut(s)	269, 294, 344
BstHHI	GCGC	4 cut(s)	271, 294, 344, 527
BstKTI	GATC	6 cut(s)	133, 1177, 1519, 1703, 1839, 2107
BstMAI	GTCTC	4 cut(s)	295, 551, 1652, 2228
BstMBI	GATC	6 cut(s)	130, 1174, 1516, 1700, 1836, 2104
BstMWI	GCNNNNNNNGC	5 cut(s)	275, 498, 522, 2136, 2270
BstNI	CCWGG	4 cut(s)	1110, 1212, 1327, 2082
BstNSI	RCATGY	2 cut(s)	1353, 1541
BstSLI	GKGCMC	4 cut(s)	350, 399, 430, 1324
BstUI	CGCG	3 cut(s)	269, 294, 344
BstV1I	GCAGC	4 cut(s)	58, 758, 2114, 2273
BstV2I	GAAGAC	2 cut(s)	798, 1048
BstX2I	RGATCY	1 cut(s)	2104
BstXI	CCANNNNNNTGG	4 cut(s)	322, 857, 908, 1976
BstYI	RGATCY	1 cut(s)	2104
BsuI	GTATCC	2 cut(s)	1438, 2161
BsuRI	GGCC	8 cut(s)	95, 164, 206, 428, 443, 470, 881, 1322
BtgI	CCRYGG	1 cut(s)	90
BtsCI	GGATG	6 cut(s)	913, 1118, 1164, 1224, 2203, 2419
BtsI	GCAGTG	3 cut(s)	584, 868, 1500
BtsIMutI	CAGTG	5 cut(s)	584, 868, 956, 1500, 1726
BveI	ACCTGC	2 cut(s)	222, 2448
Cac8I	GCNNGC	8 cut(s)	273, 310, 346, 503, 523, 1320, 1363, 1367
CaiI	CAGNNNCTG	1 cut(s)	513
CciI	TCATGA	2 cut(s)	733, 1839
CfoI	GCGC	4 cut(s)	271, 294, 344, 527
Cfr10I	RCCGGY	3 cut(s)	98, 271, 1081
Cfr9I	CCCGGG	1 cut(s)	434
CseI	GACGC	1 cut(s)	635
Csp6I	GTAC	5 cut(s)	1116, 1208, 1548, 1622, 2014
CviQI	GTAC	5 cut(s)	1116, 1208, 1548, 1622, 2014
DdeI	CTNAG	9 cut(s)	1415, 1482, 1757, 1805, 1819, 2089, 2123, 2163, 2321
DpnI	GATC	6 cut(s)	132, 1176, 1518, 1702, 1838, 2106
DpnII	GATC	6 cut(s)	130, 1174, 1516, 1700, 1836, 2104
DraI	TTTAAA	1 cut(s)	2250
DrdI	GACNNNNNNGTC	1 cut(s)	146
DseDI	GACNNNNNNGTC	1 cut(s)	146
EaeI	YGGCCR	2 cut(s)	93, 162
Eam1104I	CTCTTC	1 cut(s)	2244
EarI	CTCTTC	1 cut(s)	2244
EciI	GGCGGA	3 cut(s)	169, 210, 933
Ecl136II	GAGCTC	2 cut(s)	484, 2317
Eco130I	CCWWGG	2 cut(s)	62, 90
Eco24I	GRGCYC	6 cut(s)	179, 263, 430, 486, 1324, 2319
Eco31I	GGTCTC	1 cut(s)	551
Eco47I	GGWCC	2 cut(s)	454, 1568
Eco53kI	GAGCTC	2 cut(s)	484, 2317
Eco57I	CTGAAG	2 cut(s)	741, 1797
Eco72I	CACGTG	1 cut(s)	334
Eco88I	CYCGRG	3 cut(s)	200, 298, 434
EcoICRI	GAGCTC	2 cut(s)	484, 2317
EcoO109I	RGGNCCY	3 cut(s)	427, 454, 1321
EcoRI	GAATTC	1 cut(s)	1031
EcoRII	CCWGG	4 cut(s)	1108, 1210, 1325, 2080
EcoT14I	CCWWGG	2 cut(s)	62, 90
EcoT38I	GRGCYC	6 cut(s)	179, 263, 430, 486, 1324, 2319
ErhI	CCWWGG	2 cut(s)	62, 90
FalI	AAGNNNNNCTT	6 cut(s)	779, 811, 1671, 1703, 2262, 2294
FaqI	GGGAC	5 cut(s)	134, 440, 451, 1300, 1508
FauI	CCCGC	7 cut(s)	195, 240, 274, 319, 402, 438, 1311
FblI	GTMKAC	2 cut(s)	150, 969
Fnu4HI	GCNGC	7 cut(s)	47, 96, 276, 553, 772, 2128, 2262
FokI	GGATG	6 cut(s)	920, 1125, 1171, 1231, 2210, 2406
FriOI	GRGCYC	6 cut(s)	179, 263, 430, 486, 1324, 2319
Fsp4HI	GCNGC	7 cut(s)	47, 96, 276, 553, 772, 2128, 2262
FspBI	CTAG	5 cut(s)	63, 1038, 1074, 1560, 2334
GlaI	GCGC	4 cut(s)	270, 293, 343, 526
GluI	GCNGC	7 cut(s)	47, 96, 276, 553, 772, 2128, 2262
GsuI	CTGGAG	2 cut(s)	398, 1934
HaeIII	GGCC	8 cut(s)	95, 164, 206, 428, 443, 470, 881, 1322
HgaI	GACGC	1 cut(s)	635
HhaI	GCGC	4 cut(s)	271, 294, 344, 527
Hin6I	GCGC	4 cut(s)	269, 292, 342, 525
HinP1I	GCGC	4 cut(s)	269, 292, 342, 525
HincII	GTYRAC	3 cut(s)	151, 1734, 1902
HindII	GTYRAC	3 cut(s)	151, 1734, 1902
HindIII	AAGCTT	1 cut(s)	2086
HphI	GGTGA	6 cut(s)	113, 136, 488, 752, 905, 1334
Hpy166II	GTNNAC	6 cut(s)	151, 358, 761, 970, 1734, 1902
Hpy188III	TCNNGA	9 cut(s)	200, 415, 457, 734, 1123, 1437, 1466, 1840, 2165
Hpy8I	GTNNAC	6 cut(s)	151, 358, 761, 970, 1734, 1902
Hpy99I	CGWCG	4 cut(s)	152, 155, 158, 545
HpyAV	CCTTC	8 cut(s)	608, 688, 716, 781, 803, 1209, 1441, 1484
HpyCH4III	ACNGT	8 cut(s)	148, 421, 541, 758, 765, 951, 1129, 2297
HpyCH4IV	ACGT	2 cut(s)	333, 1710
HpyCH4V	TGCA	5 cut(s)	4, 875, 1139, 1181, 2095
HpyF10VI	GCNNNNNNNGC	5 cut(s)	275, 498, 522, 2136, 2270
HpyF3I	CTNAG	9 cut(s)	1415, 1482, 1757, 1805, 1819, 2089, 2123, 2163, 2321
HpySE526I	ACGT	2 cut(s)	333, 1710
HspAI	GCGC	4 cut(s)	269, 292, 342, 525
Kpn2I	TCCGGA	1 cut(s)	1465
KroI	GCCGGC	1 cut(s)	271
KroNI	GCCGGC	1 cut(s)	273
Kzo9I	GATC	6 cut(s)	130, 1174, 1516, 1700, 1836, 2104
LmnI	GCTCC	7 cut(s)	182, 317, 481, 624, 2077, 2314, 2322
Lsp1109I	GCAGC	4 cut(s)	58, 758, 2114, 2273
LweI	GCATC	5 cut(s)	884, 1190, 1209, 1757, 1978
MaeI	CTAG	5 cut(s)	63, 1038, 1074, 1560, 2334
MaeII	ACGT	2 cut(s)	333, 1710
MaeIII	GTNAC	6 cut(s)	101, 329, 647, 1164, 1401, 2446
MalI	GATC	6 cut(s)	132, 1176, 1518, 1702, 1838, 2106
MboI	GATC	6 cut(s)	130, 1174, 1516, 1700, 1836, 2104
MflI	RGATCY	1 cut(s)	2104
MlsI	TGGCCA	1 cut(s)	164
MluNI	TGGCCA	1 cut(s)	164
MlyI	GAGTC	3 cut(s)	519, 812, 2230
MmeI	TCCRAC	4 cut(s)	339, 1010, 1071, 1855
Mox20I	TGGCCA	1 cut(s)	164
MreI	CGCCGGCG	1 cut(s)	271
MroI	TCCGGA	1 cut(s)	1465
MroNI	GCCGGC	1 cut(s)	271
MroXI	GAANNNNTTC	1 cut(s)	1922
MscI	TGGCCA	1 cut(s)	164
MseI	TTAA	3 cut(s)	767, 2249, 2479
MslI	CAYNNNNRTG	5 cut(s)	738, 979, 1943, 1974, 2387
Msp20I	TGGCCA	1 cut(s)	164
MvaI	CCWGG	4 cut(s)	1110, 1212, 1327, 2082
MvnI	CGCG	3 cut(s)	269, 294, 344
MwoI	GCNNNNNNNGC	5 cut(s)	275, 498, 522, 2136, 2270
NaeI	GCCGGC	1 cut(s)	273
NciI	CCSGG	6 cut(s)	350, 394, 435, 436, 445, 1228
NcoI	CCATGG	1 cut(s)	90
NdeII	GATC	6 cut(s)	130, 1174, 1516, 1700, 1836, 2104
NgoMIV	GCCGGC	1 cut(s)	271
NlaIV	GGNNCC	9 cut(s)	178, 428, 429, 456, 469, 1052, 1322, 1323, 2079
NmeAIII	GCCGAG	1 cut(s)	528
NmuCI	GTSAC	3 cut(s)	101, 329, 647
NspI	RCATGY	2 cut(s)	1353, 1541
NspV	TTCGAA	1 cut(s)	1926
OliI	CACNNNNGTG	1 cut(s)	1974
PagI	TCATGA	2 cut(s)	733, 1839
PaqCI	CACCTGC	2 cut(s)	222, 2448
PciI	ACATGT	2 cut(s)	1349, 1537
PcsI	WCGNNNNNNNCGW	2 cut(s)	144, 2335
PdiI	GCCGGC	1 cut(s)	273
PdmI	GAANNNNTTC	1 cut(s)	1922
PflMI	CCANNNNNTGG	2 cut(s)	171, 1069
PfoI	TCCNGGA	2 cut(s)	1108, 1226
PkrI	GCNGC	7 cut(s)	48, 97, 277, 554, 773, 2129, 2263
PleI	GAGTC	3 cut(s)	518, 811, 2230
PmaCI	CACGTG	1 cut(s)	334
PmlI	CACGTG	1 cut(s)	334
PpsI	GAGTC	3 cut(s)	518, 811, 2230
Ppu21I	YACGTR	1 cut(s)	334
PpuMI	RGGWCCY	1 cut(s)	454
PscI	ACATGT	2 cut(s)	1349, 1537
PsiI	TTATAA	1 cut(s)	1461
Psp124BI	GAGCTC	2 cut(s)	486, 2319
Psp5II	RGGWCCY	1 cut(s)	454
Psp6I	CCWGG	4 cut(s)	1108, 1210, 1325, 2080
PspCI	CACGTG	1 cut(s)	334
PspGI	CCWGG	4 cut(s)	1108, 1210, 1325, 2080
PspN4I	GGNNCC	9 cut(s)	178, 428, 429, 456, 469, 1052, 1322, 1323, 2079
PspOMI	GGGCCC	2 cut(s)	426, 1320
PspPPI	RGGWCCY	1 cut(s)	454
PstNI	CAGNNNCTG	1 cut(s)	513
PsuI	RGATCY	1 cut(s)	2104
RsaI	GTAC	5 cut(s)	1117, 1209, 1549, 1623, 2015
RsaNI	GTAC	5 cut(s)	1116, 1208, 1548, 1622, 2014
RseI	CAYNNNNRTG	5 cut(s)	738, 979, 1943, 1974, 2387
SacI	GAGCTC	2 cut(s)	486, 2319
SalI	GTCGAC	1 cut(s)	149
SaqAI	TTAA	3 cut(s)	767, 2249, 2479
SatI	GCNGC	7 cut(s)	47, 96, 276, 553, 772, 2128, 2262
Sau3AI	GATC	6 cut(s)	130, 1174, 1516, 1700, 1836, 2104
SchI	GAGTC	3 cut(s)	519, 812, 2230
SfaNI	GCATC	5 cut(s)	884, 1190, 1209, 1757, 1978
SfuI	TTCGAA	1 cut(s)	1926
SgrAI	CRCCGGYG	2 cut(s)	98, 271
SgrDI	CGTCGACG	1 cut(s)	149
SinI	GGWCC	2 cut(s)	454, 1568
SmaI	CCCGGG	1 cut(s)	436
SmiMI	CAYNNNNRTG	5 cut(s)	738, 979, 1943, 1974, 2387
SpeI	ACTAGT	1 cut(s)	1559
SspI	AATATT	1 cut(s)	1059
SspMI	CTAG	5 cut(s)	63, 1038, 1074, 1560, 2334
SstI	GAGCTC	2 cut(s)	486, 2319
StyI	CCWWGG	2 cut(s)	62, 90
TaaI	ACNGT	8 cut(s)	148, 421, 541, 758, 765, 951, 1129, 2297
TaiI	ACGT	2 cut(s)	336, 1713
TaqI	TCGA	5 cut(s)	138, 150, 631, 1452, 1926
TatI	WGTACW	3 cut(s)	1115, 1621, 2013
TauI	GCSGC	3 cut(s)	98, 278, 555
Tru1I	TTAA	3 cut(s)	767, 2249, 2479
Tru9I	TTAA	3 cut(s)	767, 2249, 2479
TscAI	CASTG	5 cut(s)	584, 868, 956, 1507, 1726
TseFI	GTSAC	3 cut(s)	101, 329, 647
TseI	GCWGC	4 cut(s)	46, 771, 2127, 2261
Tsp45I	GTSAC	3 cut(s)	101, 329, 647
TspDTI	ATGAA	5 cut(s)	99, 627, 1175, 1608, 2408
TspGWI	ACGGA	3 cut(s)	1094, 1259, 2030
TspMI	CCCGGG	1 cut(s)	434
TspRI	CASTG	5 cut(s)	584, 868, 956, 1507, 1726
Van91I	CCANNNNNTGG	2 cut(s)	171, 1069
VpaK11BI	GGWCC	2 cut(s)	454, 1568
XapI	RAATTY	2 cut(s)	1031, 2400
XceI	RCATGY	2 cut(s)	1353, 1541
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1152
XmaI	CCCGGG	1 cut(s)	434
XmaJI	CCTAGG	1 cut(s)	62
XmiI	GTMKAC	2 cut(s)	150, 969
XmnI	GAANNNNTTC	1 cut(s)	1922
XspI	CTAG	5 cut(s)	63, 1038, 1074, 1560, 2334

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.