Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr4C

Orthogroup ID

OG0009955

Physical Location & Seq

Genomic Coordinates Reverse (-)

48592612 .. 48599052

Gene Structure 6441 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh4CG240200.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2382 bp

ATGGCCGCCGGCGACACTTCATCTGTCTGGGACTGGGGCGATCTCCTCGACTTCACCGTCGACGACGACTTGGCCATCTCATGGGCCTCCGCCGACCCGCCCAACCCGCCCGAGTCCCACCACCTGCCCCCGCCGGACGACCCGCCGGAGAATCCGAATCCGAGCCCGGCGCCGGCGGCAAGGATAAGGAAGCGCGACCCGAGACTGGCGTGCTCCAACTTTCTGGCGGGTCACGTGCCGTGCGCGTGCCCGGAGGTGGACGAGAAAATGATGGAACTGGAGGAGGAGGAAGCCGGGCACGGGAAGAAGCGGGTCAGGACGGTTCGGGCCCCGCCCGGGACGGCCCGGTGTCAGGTCCCGACTTGTGGGGCCGACATTAAGGAGCTCAAAGGCTATCACCGCAGGCACAGAGTCTGCCTTGCCTGCGCCAATGCCACCACCGTCGTCCTTGGCGGCGACACCAAGCGTTATTGTCAGCAGTGTGGCAAGTTCCATGTCTTATCTGATTTTGATGAAGGTAAGCGGAGCTGTCGAAGAAAATTAGAGCGTCACAATAACAGAAGAAGAAGAAAACCGAGTGATTCAAAAGCAGGGAAGGAATCTCAAAGGGAAGTTCAAACTGAAGGTGGCAATCGTGATGGTGAAGCAGGAGAAGACAGTTTACAGTTAAGCAGCCAGATAAATGAGAAGGAAGACTTGGTGGAGTCAGAAGGTGGGGGTATTTCTACCCTCTTTTCAATGCCTAATTCTCAGAATGTCGGCAGTGATGGTGTTGCATCGGCCCTGACTTCTGGTGATACCCAAATGGATGGAAGAAAACATGATTCCAATCACTCTCTTTCTCCGCCCCAGTGCGACAACAAAAGTGTCTACTCATCTATGTGTCCGACAGGTCGTATCTCATTCAAGCTCTATGATTGGAATCCAGCAGAATTCCCTAGAAGACTTCGGCACCAAATATTCCAATGGTTGGCTAGTATGCCGGTTGAGTTGGAGGGGTATATCCGTCCTGGATGTATTATCTTGACTGTTTTTATTGCAATGCCAAAGTTTATGTGGATGAAGTTACTTGATGATCCTGCATCGTATCTACATAACTTTGTTATCGTACCTGGAAGGATGCTATCGGGGAGGGGAAATATGCTTGTTTATCTCAATGACATGATTTTCCGTGTTGTAAAAGACGGGACTTCTGTAATAAAAGCCAAAGTGGAGGTGCGGGCCCCCAGGCTACATTATATTCATCCTACATGTTTTGAAGCAGGCAAGCCAATGGAGTTTTTTGTCTGTGGAAGTAATTTGTTACAACCCAAACTTAGGTTTCTTGTATCCTTCTCTGGAAAGTATCTGGCCGATAATTATGACCCGGAATCCTCTCATACTCAGATTGAAGGGGACAGCACTGCTGCTAATATAGATCATCAACTTTACAAGATACATGTGCCTCATACAGAAGCAACTAGTTTTGGTCCTGCTTTTATTGAGGTTGAAAATGAATCTGGGTTATCAAACTTTTTACCTGTACTCATTGGGAACAAAGAGATTTGTGCTGAAATGGAGACTATTCAAAAAAGATTAGAAGAATCTCTTTTTGTGCGAGGATCATCAGATGTTTCTTCCAGTGGTTCTCTGTTGACCTCTTGTGAAGCATCTTCACTGAGACACAGAGCATTTTCTGAAGTTATTTTAGATATAGCATGGCTTCTTAGAAAGCCCTCCTCAGAAAATGTCCAACAGATCATGACTTCTTCACAGGCACAAAGATTCAATAATTTATTGAACTTATTGATATTCTTCAAGTCAACAACCATACTGGAGAAAGTGTTAGAAAATCTGAACACTCTGATGGATAATGTAGAGATAAACAACCCCGATAGTGGCAGCATTGATGCTGATATGAGGCTATTACAGAAGTACATGGATTGTTCTCGTGATATTCTTTGTCAAAAACTTCAAAGTTCTGGGGTTTCAGTTGTGGAGCCTGGAAGCTTGGTGCAGAAACAGGATCTTATTTCTCAAAGTCTAAGCTGCTTTCAGAGCAAACAACATTTTCCCATACACACTCAGGATACAGAGATTATTGTAGATGGTAAGATGGATGCGATGTTGGGTTCAACATCTAATGAGAGAAGTGAGACTCTTCCACTTTTAAACAAAAAAGCAGCCACGAAAGCCAACCTTATCAAACAGGCTAACTGTGGTATTTCTTCTGGGGAGCTCCTAAGCTCTCGCTCTAGGCGAACATTCTTGGGATTTCGCCCCACTCTCTATGTAATTTCTGCCACTGCTATGTGTTTAGGAATTTGTGCGGTCGTCTTTCATCCTCATAAGGTTGGCGAATTAGCAGTAACAATACGCAGGTGTCTATTTGACAAGATTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0006355 GO:0006950 GO:0007154 GO:0008150 GO:0009267 GO:0009605 GO:0009889 GO:0009987 GO:0009991 GO:0010468 GO:0010556 GO:0016604 GO:0016607 GO:0019219 GO:0019222 GO:0031323 GO:0031326 GO:0031667 GO:0031668 GO:0031669 GO:0031974 GO:0031981 GO:0033554 GO:0035874 GO:0040008 GO:0042594 GO:0042802 GO:0042803 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044451 GO:0044464 GO:0046983 GO:0048638 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051171 GO:0051252 GO:0051716 GO:0060255 GO:0065007 GO:0070013 GO:0071496 GO:0080090 GO:0120126 GO:1903506 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

SBP

Protein Analysis

793

Amino Acids

88.07

Weight (kDa)

6.47

Isoelectric Point (pI)

53.44

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
SBP	PF03110	117 - 191	7.6e-28	SBP domain
Ig_SPL7	PF26102	405 - 520	2.4e-37	SPL7-like, immunoglobulin-like domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009955)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G18830 AT5G18830 AT5G18830
fragaria_vesca	FvH4_4g16910 FvH4_4g16910 FvH4_4g16910 FvH4_4g16910
malus_domestica	MD13G1175800.v1.1 MD16G1177600.v1.1
prunus_persica	Prupe.1G144600_v2.0.a1
pyrus_communis	pycom13g15150 pycom16g14900
rosa_chinensis	RchiOBHm_Chr4g0420491
rosa_laevigata	RLG00000007757
rosa_roxburghii	Rroxscaffold_5G00363110
rosa_rugosa	Rorug04G0164300
rosa_samantha	Rh4AG225900 Rh4BG228600 Rh4CG240200 Rh4DG224300
rosa_wichuraiana	Rw4G019500

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	2 cut(s)	132, 2349
AasI	GACNNNNNNGTC	1 cut(s)	56
Acc36I	ACCTGC	2 cut(s)	132, 2349
AccB1I	GGYRCC	2 cut(s)	169, 951
AccB7I	CCANNNNNTGG	2 cut(s)	81, 970
AccI	GTMKAC	2 cut(s)	60, 870
AccII	CGCG	2 cut(s)	195, 245
AclWI	GGATC	3 cut(s)	1070, 1609, 2013
AcoI	YGGCCR	3 cut(s)	3, 72, 1350
AcsI	RAATTY	2 cut(s)	932, 2301
AcuI	CTGAAG	2 cut(s)	642, 1698
AcvI	CACGTG	1 cut(s)	235
AcyI	GRCGYC	1 cut(s)	170
AfaI	GTAC	3 cut(s)	1110, 1524, 1916
AflIII	ACRYGT	2 cut(s)	1250, 1438
AhlI	ACTAGT	1 cut(s)	1460
AjnI	CCWGG	4 cut(s)	1009, 1111, 1226, 1981
AjuI	GAANNNNNNNTTGG	2 cut(s)	680, 712
AluBI	AGCT	7 cut(s)	385, 528, 910, 1989, 2028, 2218, 2226
AluI	AGCT	7 cut(s)	385, 528, 910, 1989, 2028, 2218, 2226
Alw21I	GWGCWC	3 cut(s)	215, 387, 2220
Alw26I	GTCTC	4 cut(s)	196, 1553, 1654, 2129
AlwI	GGATC	3 cut(s)	1070, 1609, 2013
AlwNI	CAGNNNCTG	1 cut(s)	414
Ama87I	CYCGRG	3 cut(s)	110, 199, 335
AoxI	GGCC	9 cut(s)	3, 72, 84, 327, 342, 369, 780, 1221, 1350
ApaI	GGGCCC	2 cut(s)	331, 1225
ApeKI	GCWGC	5 cut(s)	672, 1406, 1881, 2028, 2162
ApoI	RAATTY	2 cut(s)	932, 2301
AspLEI	GCGC	4 cut(s)	172, 195, 245, 428
AsuC2I	CCSGG	7 cut(s)	167, 251, 295, 336, 337, 346, 1367
AsuHPI	GGTGA	4 cut(s)	46, 389, 653, 806
AvaI	CYCGRG	3 cut(s)	110, 199, 335
AvaII	GGWCC	2 cut(s)	355, 1469
BaeGI	GKGCMC	4 cut(s)	251, 300, 331, 1225
BalI	TGGCCA	1 cut(s)	74
BanI	GGYRCC	2 cut(s)	169, 951
BanII	GRGCYC	5 cut(s)	167, 331, 387, 1225, 2220
BarI	GAAGNNNNNNTAC	2 cut(s)	645, 677
BauI	CACGAG	1 cut(s)	1929
BbrPI	CACGTG	1 cut(s)	235
BbsI	GAAGAC	3 cut(s)	660, 699, 949
Bbv12I	GWGCWC	3 cut(s)	215, 387, 2220
BbvI	GCAGC	5 cut(s)	684, 1393, 1893, 2015, 2174
BccI	CCATC	8 cut(s)	83, 265, 632, 761, 803, 1840, 2081, 2089
BceAI	ACGGC	2 cut(s)	223, 357
BciT130I	CCWGG	4 cut(s)	1011, 1113, 1228, 1983
BciVI	GTATCC	2 cut(s)	1339, 2062
BcnI	CCSGG	7 cut(s)	167, 251, 295, 336, 337, 346, 1367
BcoDI	GTCTC	4 cut(s)	196, 1553, 1654, 2129
BcuI	ACTAGT	1 cut(s)	1460
BfaI	CTAG	4 cut(s)	939, 975, 1461, 2235
BfoI	RGCGCY	1 cut(s)	173
BfuAI	ACCTGC	2 cut(s)	132, 2349
BfuI	GTATCC	2 cut(s)	1339, 2062
BisI	GCNGC	8 cut(s)	6, 177, 454, 673, 1407, 1882, 2029, 2163
BlsI	GCNGC	8 cut(s)	7, 178, 455, 674, 1408, 1883, 2030, 2164
Bme18I	GGWCC	2 cut(s)	355, 1469
BmeT110I	CYCGRG	3 cut(s)	110, 199, 335
BmiI	GGNNCC	9 cut(s)	171, 329, 330, 357, 370, 953, 1223, 1224, 1980
BmrI	ACTGGG	2 cut(s)	43, 844
BmsI	GCATC	6 cut(s)	785, 1091, 1110, 1658, 1879, 2089
BmuI	ACTGGG	2 cut(s)	43, 844
BpiI	GAAGAC	3 cut(s)	660, 699, 949
BpmI	CTGGAG	2 cut(s)	299, 1835
Bpu10I	CCTNAGC	1 cut(s)	2222
BpuMI	CCSGG	7 cut(s)	167, 251, 295, 336, 337, 346, 1367
BsaAI	YACGTR	1 cut(s)	235
BsaBI	GATNNNNATC	2 cut(s)	828, 921
BsaHI	GRCGYC	1 cut(s)	170
BsaJI	CCNNGG	3 cut(s)	335, 448, 1226
BsaXI	ACNNNNNCTCC	2 cut(s)	1808, 1838
Bse118I	RCCGGY	3 cut(s)	8, 172, 982
Bse1I	ACTGG	6 cut(s)	38, 210, 282, 850, 1620, 1818
Bse3DI	GCAATG	1 cut(s)	1047
Bse8I	GATNNNNATC	2 cut(s)	828, 921
BseBI	CCWGG	4 cut(s)	1011, 1113, 1228, 1983
BseDI	CCNNGG	3 cut(s)	335, 448, 1226
BseGI	GGATG	7 cut(s)	814, 1019, 1065, 1125, 1243, 2104, 2320
BseJI	GATNNNNATC	2 cut(s)	828, 921
BseMI	GCAATG	1 cut(s)	1047
BseMII	CTCAG	5 cut(s)	764, 1397, 1649, 1734, 2078
BseNI	ACTGG	6 cut(s)	38, 210, 282, 850, 1620, 1818
BseRI	GAGGAG	4 cut(s)	35, 296, 299, 1708
BseSI	GKGCMC	4 cut(s)	251, 300, 331, 1225
BseXI	GCAGC	5 cut(s)	684, 1393, 1893, 2015, 2174
BsgI	GTGCAG	1 cut(s)	2015
Bsh1236I	CGCG	2 cut(s)	195, 245
Bsh1285I	CGRYCG	1 cut(s)	2313
BshFI	GGCC	9 cut(s)	5, 74, 86, 329, 344, 371, 782, 1223, 1352
BshNI	GGYRCC	2 cut(s)	169, 951
BsiEI	CGRYCG	1 cut(s)	2313
BsiHKAI	GWGCWC	3 cut(s)	215, 387, 2220
BsiHKCI	CYCGRG	3 cut(s)	110, 199, 335
BslFI	GGGAC	6 cut(s)	44, 100, 341, 352, 1201, 1409
BsmAI	GTCTC	4 cut(s)	196, 1553, 1654, 2129
BsmFI	GGGAC	6 cut(s)	44, 100, 341, 352, 1201, 1409
BsnI	GGCC	9 cut(s)	5, 74, 86, 329, 344, 371, 782, 1223, 1352
BsoBI	CYCGRG	3 cut(s)	110, 199, 335
Bsp120I	GGGCCC	2 cut(s)	327, 1221
Bsp1286I	GDGCHC	8 cut(s)	167, 215, 251, 300, 331, 387, 1225, 2220
Bsp143I	GATC	6 cut(s)	40, 1075, 1417, 1601, 1737, 2005
BspANI	GGCC	9 cut(s)	5, 74, 86, 329, 344, 371, 782, 1223, 1352
BspCNI	CTCAG	5 cut(s)	763, 1396, 1650, 1733, 2077
BspFNI	CGCG	2 cut(s)	195, 245
BspHI	TCATGA	1 cut(s)	1740
BspLI	GGNNCC	9 cut(s)	171, 329, 330, 357, 370, 953, 1223, 1224, 1980
BspMI	ACCTGC	2 cut(s)	132, 2349
BspPI	GGATC	3 cut(s)	1070, 1609, 2013
BspT107I	GGYRCC	2 cut(s)	169, 951
BsrDI	GCAATG	1 cut(s)	1047
BsrFI	RCCGGY	3 cut(s)	8, 172, 982
BsrI	ACTGG	6 cut(s)	38, 210, 282, 850, 1620, 1818
BssAI	RCCGGY	3 cut(s)	8, 172, 982
BssECI	CCNNGG	3 cut(s)	335, 448, 1226
BssMI	GATC	6 cut(s)	40, 1075, 1417, 1601, 1737, 2005
BssNI	GRCGYC	1 cut(s)	170
BssSI	CACGAG	1 cut(s)	1929
BssT1I	CCWWGG	1 cut(s)	448
Bst2BI	CACGAG	1 cut(s)	1929
Bst2UI	CCWGG	4 cut(s)	1011, 1113, 1228, 1983
Bst4CI	ACNGT	7 cut(s)	58, 322, 442, 659, 666, 1030, 2198
Bst6I	CTCTTC	1 cut(s)	2145
BstACI	GRCGYC	1 cut(s)	170
BstBAI	YACGTR	1 cut(s)	235
BstC8I	GCNNGC	9 cut(s)	10, 174, 211, 247, 404, 424, 1221, 1264, 1268
BstDEI	CTNAG	9 cut(s)	750, 1316, 1383, 1658, 1706, 1720, 2024, 2064, 2222
BstF5I	GGATG	7 cut(s)	814, 1019, 1065, 1125, 1243, 2104, 2320
BstFNI	CGCG	2 cut(s)	195, 245
BstH2I	RGCGCY	1 cut(s)	173
BstHHI	GCGC	4 cut(s)	172, 195, 245, 428
BstKTI	GATC	6 cut(s)	43, 1078, 1420, 1604, 1740, 2008
BstMAI	GTCTC	4 cut(s)	196, 1553, 1654, 2129
BstMBI	GATC	6 cut(s)	40, 1075, 1417, 1601, 1737, 2005
BstMCI	CGRYCG	1 cut(s)	2313
BstMWI	GCNNNNNNNGC	6 cut(s)	106, 176, 399, 423, 2037, 2171
BstNI	CCWGG	4 cut(s)	1011, 1113, 1228, 1983
BstNSI	RCATGY	2 cut(s)	1254, 1442
BstSLI	GKGCMC	4 cut(s)	251, 300, 331, 1225
BstUI	CGCG	2 cut(s)	195, 245
BstV1I	GCAGC	5 cut(s)	684, 1393, 1893, 2015, 2174
BstV2I	GAAGAC	3 cut(s)	660, 699, 949
BstX2I	RGATCY	1 cut(s)	2005
BstXI	CCANNNNNNTGG	2 cut(s)	223, 809
BstYI	RGATCY	1 cut(s)	2005
BsuI	GTATCC	2 cut(s)	1339, 2062
BsuRI	GGCC	9 cut(s)	5, 74, 86, 329, 344, 371, 782, 1223, 1352
BtgZI	GCGATG	1 cut(s)	2117
BtsCI	GGATG	7 cut(s)	814, 1019, 1065, 1125, 1243, 2104, 2320
BtsI	GCAGTG	4 cut(s)	485, 769, 1401, 2283
BtsIMutI	CAGTG	7 cut(s)	485, 769, 857, 1401, 1627, 1655, 2283
BveI	ACCTGC	2 cut(s)	132, 2349
Cac8I	GCNNGC	9 cut(s)	10, 174, 211, 247, 404, 424, 1221, 1264, 1268
CaiI	CAGNNNCTG	1 cut(s)	414
CciI	TCATGA	1 cut(s)	1740
CfoI	GCGC	4 cut(s)	172, 195, 245, 428
Cfr10I	RCCGGY	3 cut(s)	8, 172, 982
Cfr9I	CCCGGG	1 cut(s)	335
CseI	GACGC	1 cut(s)	536
Csp6I	GTAC	3 cut(s)	1109, 1523, 1915
CviAII	CATG	9 cut(s)	81, 494, 821, 1162, 1251, 1439, 1698, 1741, 1918
CviQI	GTAC	3 cut(s)	1109, 1523, 1915
DdeI	CTNAG	9 cut(s)	750, 1316, 1383, 1658, 1706, 1720, 2024, 2064, 2222
DinI	GGCGCC	1 cut(s)	171
DpnI	GATC	6 cut(s)	42, 1077, 1419, 1603, 1739, 2007
DpnII	GATC	6 cut(s)	40, 1075, 1417, 1601, 1737, 2005
DraI	TTTAAA	1 cut(s)	2151
DrdI	GACNNNNNNGTC	1 cut(s)	56
DseDI	GACNNNNNNGTC	1 cut(s)	56
EaeI	YGGCCR	3 cut(s)	3, 72, 1350
Eam1104I	CTCTTC	1 cut(s)	2145
EarI	CTCTTC	1 cut(s)	2145
EciI	GGCGGA	2 cut(s)	79, 834
Ecl136II	GAGCTC	2 cut(s)	385, 2218
Eco130I	CCWWGG	1 cut(s)	448
Eco24I	GRGCYC	5 cut(s)	167, 331, 387, 1225, 2220
Eco47I	GGWCC	2 cut(s)	355, 1469
Eco53kI	GAGCTC	2 cut(s)	385, 2218
Eco57I	CTGAAG	2 cut(s)	642, 1698
Eco72I	CACGTG	1 cut(s)	235
Eco88I	CYCGRG	3 cut(s)	110, 199, 335
EcoICRI	GAGCTC	2 cut(s)	385, 2218
EcoO109I	RGGNCCY	3 cut(s)	328, 355, 1222
EcoRI	GAATTC	1 cut(s)	932
EcoRII	CCWGG	4 cut(s)	1009, 1111, 1226, 1981
EcoT14I	CCWWGG	1 cut(s)	448
EcoT38I	GRGCYC	5 cut(s)	167, 331, 387, 1225, 2220
EgeI	GGCGCC	1 cut(s)	171
EheI	GGCGCC	1 cut(s)	171
ErhI	CCWWGG	1 cut(s)	448
FaeI	CATG	9 cut(s)	84, 497, 824, 1165, 1254, 1442, 1701, 1744, 1921
FalI	AAGNNNNNCTT	6 cut(s)	680, 712, 1572, 1604, 2163, 2195
FaqI	GGGAC	6 cut(s)	44, 100, 341, 352, 1201, 1409
FatI	CATG	9 cut(s)	80, 493, 820, 1161, 1250, 1438, 1697, 1740, 1917
FauI	CCCGC	8 cut(s)	105, 114, 138, 150, 220, 303, 339, 1212
FblI	GTMKAC	2 cut(s)	60, 870
Fnu4HI	GCNGC	8 cut(s)	6, 177, 454, 673, 1407, 1882, 2029, 2163
FokI	GGATG	7 cut(s)	821, 1026, 1072, 1132, 1230, 2111, 2307
FriOI	GRGCYC	5 cut(s)	167, 331, 387, 1225, 2220
Fsp4HI	GCNGC	8 cut(s)	6, 177, 454, 673, 1407, 1882, 2029, 2163
FspBI	CTAG	4 cut(s)	939, 975, 1461, 2235
GlaI	GCGC	4 cut(s)	171, 194, 244, 427
GluI	GCNGC	8 cut(s)	6, 177, 454, 673, 1407, 1882, 2029, 2163
GsuI	CTGGAG	2 cut(s)	299, 1835
HaeII	RGCGCY	1 cut(s)	173
HaeIII	GGCC	9 cut(s)	5, 74, 86, 329, 344, 371, 782, 1223, 1352
HgaI	GACGC	1 cut(s)	536
HhaI	GCGC	4 cut(s)	172, 195, 245, 428
Hin1I	GRCGYC	1 cut(s)	170
Hin1II	CATG	9 cut(s)	84, 497, 824, 1165, 1254, 1442, 1701, 1744, 1921
Hin6I	GCGC	4 cut(s)	170, 193, 243, 426
HinP1I	GCGC	4 cut(s)	170, 193, 243, 426
HincII	GTYRAC	3 cut(s)	61, 1635, 1803
HindII	GTYRAC	3 cut(s)	61, 1635, 1803
HindIII	AAGCTT	1 cut(s)	1987
HphI	GGTGA	4 cut(s)	46, 389, 653, 806
Hpy166II	GTNNAC	6 cut(s)	61, 259, 662, 871, 1635, 1803
Hpy188III	TCNNGA	8 cut(s)	316, 358, 635, 1024, 1338, 1741, 1931, 2066
Hpy8I	GTNNAC	6 cut(s)	61, 259, 662, 871, 1635, 1803
Hpy99I	CGWCG	4 cut(s)	62, 65, 68, 446
HpyAV	CCTTC	8 cut(s)	509, 589, 617, 682, 704, 1110, 1342, 1385
HpyCH4III	ACNGT	7 cut(s)	58, 322, 442, 659, 666, 1030, 2198
HpyCH4IV	ACGT	1 cut(s)	234
HpyCH4V	TGCA	4 cut(s)	776, 1040, 1082, 1996
HpyF10VI	GCNNNNNNNGC	6 cut(s)	106, 176, 399, 423, 2037, 2171
HpyF3I	CTNAG	9 cut(s)	750, 1316, 1383, 1658, 1706, 1720, 2024, 2064, 2222
HpySE526I	ACGT	1 cut(s)	234
Hsp92I	GRCGYC	1 cut(s)	170
Hsp92II	CATG	9 cut(s)	84, 497, 824, 1165, 1254, 1442, 1701, 1744, 1921
HspAI	GCGC	4 cut(s)	170, 193, 243, 426
KasI	GGCGCC	1 cut(s)	169
KroI	GCCGGC	2 cut(s)	8, 172
KroNI	GCCGGC	2 cut(s)	10, 174
Kzo9I	GATC	6 cut(s)	40, 1075, 1417, 1601, 1737, 2005
LmnI	GCTCC	6 cut(s)	218, 382, 525, 1978, 2215, 2223
Lsp1109I	GCAGC	5 cut(s)	684, 1393, 1893, 2015, 2174
LweI	GCATC	6 cut(s)	785, 1091, 1110, 1658, 1879, 2089
MaeI	CTAG	4 cut(s)	939, 975, 1461, 2235
MaeII	ACGT	1 cut(s)	234
MaeIII	GTNAC	5 cut(s)	230, 548, 1065, 1302, 2347
MalI	GATC	6 cut(s)	42, 1077, 1419, 1603, 1739, 2007
MboI	GATC	6 cut(s)	40, 1075, 1417, 1601, 1737, 2005
MflI	RGATCY	1 cut(s)	2005
MhlI	GDGCHC	8 cut(s)	167, 215, 251, 300, 331, 387, 1225, 2220
MlsI	TGGCCA	1 cut(s)	74
MluCI	AATT	9 cut(s)	539, 745, 932, 1297, 1357, 1771, 2274, 2301, 2339
MluNI	TGGCCA	1 cut(s)	74
Mly113I	GGCGCC	1 cut(s)	170
MlyI	GAGTC	4 cut(s)	122, 420, 713, 2131
MmeI	TCCRAC	4 cut(s)	240, 911, 972, 1756
Mox20I	TGGCCA	1 cut(s)	74
MreI	CGCCGGCG	2 cut(s)	8, 172
MroNI	GCCGGC	2 cut(s)	8, 172
MscI	TGGCCA	1 cut(s)	74
MseI	TTAA	4 cut(s)	378, 668, 2150, 2380
MslI	CAYNNNNRTG	3 cut(s)	880, 1844, 2288
Msp20I	TGGCCA	1 cut(s)	74
MvaI	CCWGG	4 cut(s)	1011, 1113, 1228, 1983
MvnI	CGCG	2 cut(s)	195, 245
MwoI	GCNNNNNNNGC	6 cut(s)	106, 176, 399, 423, 2037, 2171
NaeI	GCCGGC	2 cut(s)	10, 174
NarI	GGCGCC	1 cut(s)	170
NciI	CCSGG	7 cut(s)	167, 251, 295, 336, 337, 346, 1367
NdeII	GATC	6 cut(s)	40, 1075, 1417, 1601, 1737, 2005
NgoMIV	GCCGGC	2 cut(s)	8, 172
NlaIII	CATG	9 cut(s)	84, 497, 824, 1165, 1254, 1442, 1701, 1744, 1921
NlaIV	GGNNCC	9 cut(s)	171, 329, 330, 357, 370, 953, 1223, 1224, 1980
NmuCI	GTSAC	2 cut(s)	230, 548
NspI	RCATGY	2 cut(s)	1254, 1442
PagI	TCATGA	1 cut(s)	1740
PaqCI	CACCTGC	2 cut(s)	132, 2349
PciI	ACATGT	2 cut(s)	1250, 1438
PcsI	WCGNNNNNNNCGW	2 cut(s)	54, 2236
PdiI	GCCGGC	2 cut(s)	10, 174
PflMI	CCANNNNNTGG	2 cut(s)	81, 970
PfoI	TCCNGGA	1 cut(s)	1009
PkrI	GCNGC	8 cut(s)	7, 178, 455, 674, 1408, 1883, 2030, 2164
PleI	GAGTC	4 cut(s)	121, 419, 712, 2131
PluTI	GGCGCC	1 cut(s)	173
PmaCI	CACGTG	1 cut(s)	235
PmlI	CACGTG	1 cut(s)	235
PpsI	GAGTC	4 cut(s)	121, 419, 712, 2131
Ppu21I	YACGTR	1 cut(s)	235
PpuMI	RGGWCCY	1 cut(s)	355
PscI	ACATGT	2 cut(s)	1250, 1438
Psp124BI	GAGCTC	2 cut(s)	387, 2220
Psp5II	RGGWCCY	1 cut(s)	355
Psp6I	CCWGG	4 cut(s)	1009, 1111, 1226, 1981
PspCI	CACGTG	1 cut(s)	235
PspGI	CCWGG	4 cut(s)	1009, 1111, 1226, 1981
PspN4I	GGNNCC	9 cut(s)	171, 329, 330, 357, 370, 953, 1223, 1224, 1980
PspOMI	GGGCCC	2 cut(s)	327, 1221
PspPPI	RGGWCCY	1 cut(s)	355
PstNI	CAGNNNCTG	1 cut(s)	414
PsuI	RGATCY	1 cut(s)	2005
RsaI	GTAC	3 cut(s)	1110, 1524, 1916
RsaNI	GTAC	3 cut(s)	1109, 1523, 1915
RseI	CAYNNNNRTG	3 cut(s)	880, 1844, 2288
SacI	GAGCTC	2 cut(s)	387, 2220
SalI	GTCGAC	1 cut(s)	59
SaqAI	TTAA	4 cut(s)	378, 668, 2150, 2380
SatI	GCNGC	8 cut(s)	6, 177, 454, 673, 1407, 1882, 2029, 2163
Sau3AI	GATC	6 cut(s)	40, 1075, 1417, 1601, 1737, 2005
SchI	GAGTC	4 cut(s)	122, 420, 713, 2131
SduI	GDGCHC	8 cut(s)	167, 215, 251, 300, 331, 387, 1225, 2220
SfaNI	GCATC	6 cut(s)	785, 1091, 1110, 1658, 1879, 2089
SfoI	GGCGCC	1 cut(s)	171
SgrAI	CRCCGGYG	2 cut(s)	8, 172
SgrDI	CGTCGACG	1 cut(s)	59
SinI	GGWCC	2 cut(s)	355, 1469
SmaI	CCCGGG	1 cut(s)	337
SmiMI	CAYNNNNRTG	3 cut(s)	880, 1844, 2288
SpeI	ACTAGT	1 cut(s)	1460
Sse9I	AATT	9 cut(s)	539, 745, 932, 1297, 1357, 1771, 2274, 2301, 2339
SspDI	GGCGCC	1 cut(s)	169
SspI	AATATT	1 cut(s)	960
SspMI	CTAG	4 cut(s)	939, 975, 1461, 2235
SstI	GAGCTC	2 cut(s)	387, 2220
StyI	CCWWGG	1 cut(s)	448
TaaI	ACNGT	7 cut(s)	58, 322, 442, 659, 666, 1030, 2198
TaiI	ACGT	1 cut(s)	237
TaqI	TCGA	3 cut(s)	48, 60, 532
TasI	AATT	9 cut(s)	539, 745, 932, 1297, 1357, 1771, 2274, 2301, 2339
TatI	WGTACW	2 cut(s)	1522, 1914
TauI	GCSGC	3 cut(s)	8, 179, 456
Tru1I	TTAA	4 cut(s)	378, 668, 2150, 2380
Tru9I	TTAA	4 cut(s)	378, 668, 2150, 2380
TscAI	CASTG	7 cut(s)	485, 769, 857, 1408, 1627, 1662, 2290
TseFI	GTSAC	2 cut(s)	230, 548
TseI	GCWGC	5 cut(s)	672, 1406, 1881, 2028, 2162
Tsp45I	GTSAC	2 cut(s)	230, 548
TspDTI	ATGAA	6 cut(s)	9, 528, 1076, 1232, 1509, 2309
TspGWI	ACGGA	2 cut(s)	995, 1160
TspMI	CCCGGG	1 cut(s)	335
TspRI	CASTG	7 cut(s)	485, 769, 857, 1408, 1627, 1662, 2290
Van91I	CCANNNNNTGG	2 cut(s)	81, 970
VpaK11BI	GGWCC	2 cut(s)	355, 1469
XapI	RAATTY	2 cut(s)	932, 2301
XceI	RCATGY	2 cut(s)	1254, 1442
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1053
XmaI	CCCGGG	1 cut(s)	335
XmiI	GTMKAC	2 cut(s)	60, 870
XspI	CTAG	4 cut(s)	939, 975, 1461, 2235

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.