Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr13

Orthogroup ID

OG0010119

Physical Location & Seq

Genomic Coordinates Forward (+)

21994084 .. 21998536

Gene Structure 4453 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD13G1224700.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3363 bp

ATGGAATGGAGCATCGAGCTAGAGAAGGCCCTGCGCTCCAAGAAACCAGGGAGCTCACTCGAAGCCATTTCAGAAATCAGTGCAAGACTCCAACGGTTAAGCAGAGAGCCAGAGCCTTCTCCAGCTGTCCACCATCTGTTCGACCTAATTCCTGGTGAGGGCAAGCTCTTTTTAAATGCCATCATCCTTCGTCTTGCCAATGCTTTCGAATGTGGAGACAAGCATGTAAGGCTCTGTATTGTCAAGGCTTTTCTGTTTGAGTACCGGAAGAGGAACAAAAGGGAAGAGTATAACGGAGTTTTGTCCAAAACTCGGGTTTATAATTATATCCAGGCAGAATTGCTGAGGATGGTTAAGCTTGTGTTGGACAGTGGGGATGTTGAGGATAGGGCTTTGGCTTTGGGTCTGTTCGGTTGCTGGGCACATTTTGCTAAAGAGAGTTCGAGCACACGCTACTTGGTGCTTTCTAGTTTGGTTTCCTCACACGTTATGGAGGTAAAAGCGTCGTTATTTGCAGCAGGATGTTTTTCCGAGTTATCAGAGGACTTTGCATGCGTTGTCTTGGAGATGCTACCTCGTATGATGACTTCACCAGAAACGTCACCTGCTATAAGGTTGGCTGGAGCACGAGTGTTTGCCAAACTTGGGCGCTCACATGCTCTTGCAAATAATGCTTACAAGACTTGCCTAAAGCTTCTGTTAGAGTCCGCAGATGAGGATTGCCAGGTTGCAATGCTGGTTTCTCTCTCCAAACTGGCTTCCAGGTCAACCGTTCTTATATCTCAGCAGGTGGACTTGCTTCTCTTGTTTCTTAGCCAAGAAAAGCCTCTTCATCTGCGTGCAACGGCAGTAAGAAGCCTGCATTTTGTATACAGTCAAGGAATGTGTCATTTTCCTTTAAATGCATATCTTGTGAGAGCGTTATTTAACATACTAGATGAACCTCAAGTTCCGTCACCCATGCTATGTGATGCACTGCAGACTTTACGTAAGATTATTTCATGTACGGTACCCGATCTACCCCTTGATGTACTTGAATCTTCTAAGCTGTTAAGCGTTGTTGAGAATGCAACTTCATCTCCAATCACGTCTGAGGGCCTGTTAACTTTTTCTGTTTTGGTAGATGTTTCAAGGAAACTAAAGGGAAGTACAGAGATGGGATCTCTTGCACCTCGTTCCTCTCTTCTGCCATCGCATGTGACCTCACTTGTCATTGATCGAATCACCTTGATGGTGAAGCCAGTTTTGGATCTTTGTCAGACTGAGTCTCCAGTGTTTCAACAAGTTAATTGCCTGCTCAATCTTCTTTTCTTTCTAAGTCGAGAATATCCGGATCTGCATGTCTTTGTGTTGGATCAAATACATGTTTTGGTCAAGTCTCTCTCATATATGCATGATAATCAGGTCGTTACATCAGAAGCAGATGCATTTGTTCGTGATAATGTAGACTTGAAAGGAGAAAAAAGCAGAACTATCAGATCAAAGCTTCTATTTATTGTGTACAGATTTTTGGGGGCCTTTCTTGAAAATCTCAGTGAAGCTGGCGCCATTTCCACCAAAGTATTTGACAAAGTGAAGCTTCTGGTTGAACTTGTAAGTCAGAGCAACTTGCTTGAATGTTATACATACACACTTTACTCTTTGTTGTTACATTGTCGAATCATTTGGGATAACATGGTGCATGAGAGTGAGGGAAGTTACAATCTTGATAAGAACTTGGGCATATCTCACTCAAGGGAGCATGAAATTCGTACCATTGAACGTGCAAAGAGGATGCTGACAGAAAACAATAAGTGGCCAGCTTACAGAGTCGGGACTTATGCAGCATGTCAGGGAGCCTGGCTCACTGCCACTTTGACATTTGAGCAGTTAGCATCAATGGTTCATTCGATTTCCTGCTGCTGCTGGATGAGATCATTAGTTCAATTTTCGGATTCTGAGAGGAAACTCATGTTACTGCTGTTGACAAAACAAGGTATAGAGACACATAAATTCGATGTTATACTTTCTAGTAATGATTCAGCTAGTAATATCAGGGAGCATATTAACAGTAGTGAGCTAGCAGCCGCTTACAATGGTCTTTGTTCTTCTTTGGCAACATTAAAAGTTGATGTCAGAATGGGACAACCTTTTTATTTCCAAAGGTGGTTTTTGTCTTTAAGAGCAAATGTGCTTGGAGCAGTGGTGGATATAGTTAAAGTTCTGGAAAACATTCAATTTGACCAGCACGACATTCCCGATAATGGACAGGTTGGATACCTCGTATCCTTACAGAAGTTTACTCGAATATCTGTGCAGTTGAAGAGGCTATCACAAGAATTTGATCTAGTAACAAAATCTTTCATTGACATGGACAGAAAAAGTTCAGGAATCATTTCGGAACTCGCACTATCTTGTTCACTGTTGGCTTTTTGTGCTGGTTTTTCTCTCTACATTCCAAGCCTAATCAAATCTGTTTCCATTAACGGTCTGGGAACAACAGAGAACAACTTAGACTCAATGTTGATACAAAATCTAATTGGGCGGTTGGGGGCTAGTAACCATGAAACCAGTGCAAATCTTTATCTGCTTTTGAATCCAGCTGGCAAGCCCATTGATTGTTGTCACTTGCAGTCCAGAATCCAAGCATGTAAGGTTGGTTCTGAAGCAAAATATATTCTCAGTGTTTGTAGTTATGCGGTTTCAGGGATTTCTGGGTTGAAAAGCAAGGCAAACGGAGTCCACAATGTGGAAGGTCTGTCCCAAGCAACCAAAGACGGCTTACAACTTCTATATAGCATCCTTATGAAATGGATGCAAGTCCCCTTCCGGACTCCCAAGTACTTCTTTAAATTAAGGCCTTGCCTTGGGTCAGAACTCTTCGCTGTCAATGAAACAAGAAACCCAGATGGAATATACGTCTCCTCGGGCTTCCACTTATCATTACATTTTTGTCTTCAGTTAAGAAATGTGCCACAAGACATCCGAGTCCAGTTGAAAAATTTGTACTGCATGCTGTACAGTGGAGTATCCTTTCAGGAGCCAAGAGGAAGTGGAGAAAACAAGGAGCACAAGCAGGCTTGGGAAGCTGATGACATTGTAGAAATGAATGAAAAGCTGTTGCAGTATGTAACAGAGTGCAGTACGAAAAAAAGTAATAAGCGTCGGAGGGGTAAAAATGATGGCGAGTTCGTGAGTACGTTCGTGCGTTTCGAACTGAACGAGAGAGGGCAAGGGTTCTCAAGTTGCTTGCTTGATGTTTCTGCTTTTCCAGCGGGTTCTTACAGAATCAAATGGCATAGCTGTTGTGTTGGTAGTCAGGGTAATTGTTGGACTCTACCCACTTTGAATTCTGGTCCTCTTTTTACTGTACAAGGGTTATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

1121

Amino Acids

125.35

Weight (kDa)

8.29

Isoelectric Point (pI)

43.93

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
INTS7_N	PF24436	5 - 469	1.1e-38	Integrator complex subunit 7, N-terminal
INTS7_HB	PF24437	617 - 784	2e-06	Integrator complex subunit 7 helical bundle
INTS7_C_plants	PF22966	950 - 1118	5.1e-69	Integrator complex subunit 7, C-terminal domain in plants

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0010119)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G20060
fragaria_vesca	FvH4_4g05080 FvH4_4g05080 FvH4_4g05080 FvH4_4g05080
malus_domestica	MD13G1224700.v1.1 MD16G1229900.v1.1
prunus_persica	Prupe.3G104300_v2.0.a1
pyrus_communis	pycom13g19830 pycom16g19170
rosa_chinensis	RchiOBHm_Chr4g0396011
rosa_laevigata	RLG00000009581
rosa_multiflora	Rmu_sc0012989.1_g000013 Rmu_sc0015594.1_g000011
rosa_roxburghii	Rroxscaffold_5G00340800
rosa_rugosa	Rorug03G0352900
rosa_samantha	Rh4BG063300 Rh4CG069900 Rh4CG070000 Rh4DG059900
rosa_wichuraiana	Rw4G005230

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	321
AarI	CACCTGC	2 cut(s)	613, 778
AasI	GACNNNNNNGTC	1 cut(s)	2966
Acc36I	ACCTGC	2 cut(s)	613, 778
Acc65I	GGTACC	1 cut(s)	1009
AccB1I	GGYRCC	2 cut(s)	1009, 1544
AccB7I	CCANNNNNTGG	1 cut(s)	2728
AccI	GTMKAC	2 cut(s)	870, 1446
AccIII	TCCGGA	2 cut(s)	1330, 2808
AciI	CCGC	5 cut(s)	708, 2067, 2524, 2678, 3254
AclWI	GGATC	4 cut(s)	1168, 1257, 1341, 1362
AcoI	YGGCCR	1 cut(s)	1796
AcsI	RAATTY	5 cut(s)	1746, 1991, 2318, 2980, 3328
AcuI	CTGAAG	2 cut(s)	2664, 2921
AcyI	GRCGYC	1 cut(s)	1545
AdeI	CACNNNGTG	1 cut(s)	2728
AfiI	CCNNNNNNNGG	6 cut(s)	158, 312, 645, 2243, 2728, 2846
AflIII	ACRYGT	2 cut(s)	484, 1363
AjiI	CACGTC	1 cut(s)	1089
AjnI	CCWGG	6 cut(s)	46, 151, 330, 723, 761, 1838
AjuI	GAANNNNNNNTTGG	2 cut(s)	1229, 1261
Alw21I	GWGCWC	4 cut(s)	56, 449, 628, 3051
Alw26I	GTCTC	5 cut(s)	210, 1272, 1383, 1976, 2905
AlwI	GGATC	4 cut(s)	1168, 1257, 1341, 1362
Ama87I	CYCGRG	2 cut(s)	312, 2905
Aor13HI	TCCGGA	2 cut(s)	1330, 2808
AoxI	GGCC	5 cut(s)	27, 1096, 1515, 1796, 2837
ApeKI	GCWGC	5 cut(s)	515, 1823, 1899, 1902, 2063
ApoI	RAATTY	5 cut(s)	1746, 1991, 2318, 2980, 3328
Asp700I	GAANNNNTTC	3 cut(s)	2211, 2362, 2374
Asp718I	GGTACC	1 cut(s)	1009
AspLEI	GCGC	3 cut(s)	36, 651, 1547
AspS9I	GGNCC	4 cut(s)	28, 1096, 1515, 3335
AsuHPI	GGTGA	6 cut(s)	167, 582, 594, 948, 1216, 1246
AsuII	TTCGAA	2 cut(s)	207, 3192
AsuNHI	GCTAGC	1 cut(s)	2059
AvaI	CYCGRG	2 cut(s)	312, 2905
AvaII	GGWCC	1 cut(s)	3335
BaeGI	GKGCMC	1 cut(s)	424
BalI	TGGCCA	1 cut(s)	1798
BanI	GGYRCC	2 cut(s)	1009, 1544
BanII	GRGCYC	1 cut(s)	56
BarI	GAAGNNNNNNTAC	2 cut(s)	571, 603
BauI	CACGAG	1 cut(s)	627
BbsI	GAAGAC	1 cut(s)	2927
Bbv12I	GWGCWC	4 cut(s)	56, 449, 628, 3051
BbvCI	CCTCAGC	1 cut(s)	344
BbvI	GCAGC	5 cut(s)	527, 1835, 1886, 1889, 2075
BccI	CCATC	8 cut(s)	141, 188, 343, 1150, 1198, 1225, 2882, 3155
BceAI	ACGGC	2 cut(s)	861, 2773
BcgI	CGANNNNNNTGC	2 cut(s)	1730, 1764
BciT130I	CCWGG	6 cut(s)	48, 153, 332, 725, 763, 1840
BciVI	GTATCC	3 cut(s)	2249, 2275, 3019
BcoDI	GTCTC	5 cut(s)	210, 1272, 1383, 1976, 2905
BfaI	CTAG	8 cut(s)	20, 468, 935, 2010, 2025, 2060, 2327, 2535
BfmI	CTRYAG	1 cut(s)	977
BfoI	RGCGCY	2 cut(s)	652, 1548
BfuAI	ACCTGC	2 cut(s)	613, 778
BfuI	GTATCC	3 cut(s)	2249, 2275, 3019
BisI	GCNGC	6 cut(s)	516, 1824, 1900, 1903, 2064, 2067
BlsI	GCNGC	6 cut(s)	517, 1825, 1901, 1904, 2065, 2068
BmcAI	AGTACT	1 cut(s)	2822
Bme1390I	CCNGG	6 cut(s)	48, 153, 332, 725, 763, 1840
Bme18I	GGWCC	1 cut(s)	3335
BmeT110I	CYCGRG	2 cut(s)	312, 2905
BmgBI	CACGTC	1 cut(s)	1089
BmgT120I	GGNCC	4 cut(s)	28, 1096, 1515, 3335
BmiI	GGNNCC	5 cut(s)	1011, 1516, 1546, 1837, 3021
BmrFI	CCNGG	6 cut(s)	48, 153, 332, 725, 763, 1840
BmsI	GCATC	8 cut(s)	21, 558, 961, 1414, 1764, 1883, 2784, 2787
BmtI	GCTAGC	1 cut(s)	2063
BpiI	GAAGAC	1 cut(s)	2927
BplI	GAGNNNNNCTC	2 cut(s)	1827, 1859
BpmI	CTGGAG	3 cut(s)	105, 642, 1254
Bpu10I	CCTNAGC	1 cut(s)	344
Bpu14I	TTCGAA	2 cut(s)	207, 3192
BpuEI	CTTGAG	3 cut(s)	930, 1717, 3205
BsaAI	YACGTR	1 cut(s)	989
BsaHI	GRCGYC	1 cut(s)	1545
BsaJI	CCNNGG	3 cut(s)	47, 2845, 2904
BsaWI	WCCGGW	3 cut(s)	264, 1330, 2808
BsaXI	ACNNNNNCTCC	8 cut(s)	615, 645, 1063, 1093, 1252, 1282, 2169, 2199
Bsc4I	CCNNNNNNNGG	6 cut(s)	158, 312, 645, 2243, 2728, 2846
Bse1I	ACTGG	5 cut(s)	759, 1241, 1271, 2550, 2971
Bse3DI	GCAATG	1 cut(s)	738
BseAI	TCCGGA	2 cut(s)	1330, 2808
BseBI	CCWGG	6 cut(s)	48, 153, 332, 725, 763, 1840
BseDI	CCNNGG	3 cut(s)	47, 2845, 2904
BseGI	GGATG	9 cut(s)	183, 354, 382, 527, 1779, 1914, 2778, 2799, 2961
BseLI	CCNNNNNNNGG	6 cut(s)	158, 312, 645, 2243, 2728, 2846
BseMI	GCAATG	1 cut(s)	738
BseMII	CTCAG	7 cut(s)	335, 797, 1083, 1254, 1546, 1929, 2674
BseNI	ACTGG	5 cut(s)	759, 1241, 1271, 2550, 2971
BseRI	GAGGAG	1 cut(s)	2893
BseSI	GKGCMC	1 cut(s)	424
BseXI	GCAGC	5 cut(s)	527, 1835, 1886, 1889, 2075
BseYI	CCCAGC	1 cut(s)	417
BsgI	GTGCAG	2 cut(s)	2315, 3139
BshFI	GGCC	5 cut(s)	29, 1098, 1517, 1798, 2839
BshNI	GGYRCC	2 cut(s)	1009, 1544
BsiHKAI	GWGCWC	4 cut(s)	56, 449, 628, 3051
BsiHKCI	CYCGRG	2 cut(s)	312, 2905
BsiSI	CCGG	3 cut(s)	265, 1331, 2809
BslFI	GGGAC	4 cut(s)	1828, 2136, 2725, 2786
BslI	CCNNNNNNNGG	6 cut(s)	158, 312, 645, 2243, 2728, 2846
BsmAI	GTCTC	5 cut(s)	210, 1272, 1383, 1976, 2905
BsmBI	CGTCTC	1 cut(s)	2905
BsmFI	GGGAC	4 cut(s)	1828, 2136, 2725, 2786
BsmI	GAATGC	1 cut(s)	1072
BsnI	GGCC	5 cut(s)	29, 1098, 1517, 1798, 2839
BsoBI	CYCGRG	2 cut(s)	312, 2905
Bsp119I	TTCGAA	2 cut(s)	207, 3192
Bsp1286I	GDGCHC	5 cut(s)	56, 424, 449, 628, 3051
Bsp13I	TCCGGA	2 cut(s)	1330, 2808
Bsp1407I	TGTACA	3 cut(s)	1500, 2997, 3349
Bsp143I	GATC	9 cut(s)	1015, 1160, 1216, 1249, 1333, 1354, 1478, 1913, 2323
BspACI	CCGC	5 cut(s)	708, 2067, 2524, 2678, 3254
BspANI	GGCC	5 cut(s)	29, 1098, 1517, 1798, 2839
BspCNI	CTCAG	7 cut(s)	336, 796, 1084, 1255, 1545, 1930, 2673
BspEI	TCCGGA	2 cut(s)	1330, 2808
BspLI	GGNNCC	5 cut(s)	1011, 1516, 1546, 1837, 3021
BspMAI	CTGCAG	1 cut(s)	981
BspMI	ACCTGC	2 cut(s)	613, 778
BspOI	GCTAGC	1 cut(s)	2063
BspPI	GGATC	4 cut(s)	1168, 1257, 1341, 1362
BspT104I	TTCGAA	2 cut(s)	207, 3192
BspT107I	GGYRCC	2 cut(s)	1009, 1544
BsrDI	GCAATG	1 cut(s)	738
BsrGI	TGTACA	3 cut(s)	1500, 2997, 3349
BsrI	ACTGG	5 cut(s)	759, 1241, 1271, 2550, 2971
BssECI	CCNNGG	3 cut(s)	47, 2845, 2904
BssMI	GATC	9 cut(s)	1015, 1160, 1216, 1249, 1333, 1354, 1478, 1913, 2323
BssNAI	GTATAC	1 cut(s)	871
BssNI	GRCGYC	1 cut(s)	1545
BssSI	CACGAG	1 cut(s)	627
BssT1I	CCWWGG	1 cut(s)	2845
Bst1107I	GTATAC	1 cut(s)	871
Bst2BI	CACGAG	1 cut(s)	627
Bst2UI	CCWGG	6 cut(s)	48, 153, 332, 725, 763, 1840
Bst6I	CTCTTC	6 cut(s)	263, 279, 834, 1188, 2297, 2864
BstACI	GRCGYC	1 cut(s)	1545
BstAPI	GCANNNNNTGC	2 cut(s)	428, 671
BstAUI	TGTACA	3 cut(s)	1500, 2997, 3349
BstBAI	YACGTR	1 cut(s)	989
BstBI	TTCGAA	2 cut(s)	207, 3192
BstF5I	GGATG	9 cut(s)	183, 354, 382, 527, 1779, 1914, 2778, 2799, 2961
BstH2I	RGCGCY	2 cut(s)	652, 1548
BstHHI	GCGC	3 cut(s)	36, 651, 1547
BstKTI	GATC	9 cut(s)	1018, 1163, 1219, 1252, 1336, 1357, 1481, 1916, 2326
BstMAI	GTCTC	5 cut(s)	210, 1272, 1383, 1976, 2905
BstMBI	GATC	9 cut(s)	1015, 1160, 1216, 1249, 1333, 1354, 1478, 1913, 2323
BstMWI	GCNNNNNNNGC	6 cut(s)	229, 428, 671, 2414, 3065, 3251
BstNI	CCWGG	6 cut(s)	48, 153, 332, 725, 763, 1840
BstNSI	RCATGY	9 cut(s)	227, 555, 659, 1199, 1343, 1367, 1830, 2631, 2995
BstSCI	CCNGG	6 cut(s)	46, 151, 330, 723, 761, 1838
BstSFI	CTRYAG	1 cut(s)	977
BstSLI	GKGCMC	1 cut(s)	424
BstSNI	TACGTA	1 cut(s)	989
BstV1I	GCAGC	5 cut(s)	527, 1835, 1886, 1889, 2075
BstV2I	GAAGAC	1 cut(s)	2927
BstX2I	RGATCY	3 cut(s)	1160, 1249, 1333
BstYI	RGATCY	3 cut(s)	1160, 1249, 1333
BstZ17I	GTATAC	1 cut(s)	871
BsuI	GTATCC	3 cut(s)	2249, 2275, 3019
BsuRI	GGCC	5 cut(s)	29, 1098, 1517, 1798, 2839
BtgZI	GCGATG	1 cut(s)	1176
BtrI	CACGTC	1 cut(s)	1089
BtsCI	GGATG	9 cut(s)	183, 354, 382, 527, 1779, 1914, 2778, 2799, 2961
BtsI	GCAGTG	3 cut(s)	974, 1845, 2187
BveI	ACCTGC	2 cut(s)	613, 778
CfoI	GCGC	3 cut(s)	36, 651, 1547
Cfr13I	GGNCC	4 cut(s)	28, 1096, 1515, 3335
CseI	GACGC	2 cut(s)	492, 3131
DinI	GGCGCC	1 cut(s)	1546
DpnI	GATC	9 cut(s)	1017, 1162, 1218, 1251, 1335, 1356, 1480, 1915, 2325
DpnII	GATC	9 cut(s)	1015, 1160, 1216, 1249, 1333, 1354, 1478, 1913, 2323
DraI	TTTAAA	3 cut(s)	174, 900, 2830
DraIII	CACNNNGTG	1 cut(s)	2728
DrdI	GACNNNNNNGTC	1 cut(s)	2966
DseDI	GACNNNNNNGTC	1 cut(s)	2966
EaeI	YGGCCR	1 cut(s)	1796
Eam1104I	CTCTTC	6 cut(s)	263, 279, 834, 1188, 2297, 2864
EarI	CTCTTC	6 cut(s)	263, 279, 834, 1188, 2297, 2864
Ecl136II	GAGCTC	1 cut(s)	54
Eco105I	TACGTA	1 cut(s)	989
Eco130I	CCWWGG	1 cut(s)	2845
Eco147I	AGGCCT	1 cut(s)	2839
Eco24I	GRGCYC	1 cut(s)	56
Eco47I	GGWCC	1 cut(s)	3335
Eco53kI	GAGCTC	1 cut(s)	54
Eco57I	CTGAAG	2 cut(s)	2664, 2921
Eco88I	CYCGRG	2 cut(s)	312, 2905
EcoICRI	GAGCTC	1 cut(s)	54
EcoO109I	RGGNCCY	3 cut(s)	28, 1096, 1515
EcoRI	GAATTC	1 cut(s)	3328
EcoRII	CCWGG	6 cut(s)	46, 151, 330, 723, 761, 1838
EcoT14I	CCWWGG	1 cut(s)	2845
EcoT22I	ATGCAT	3 cut(s)	907, 1395, 1429
EcoT38I	GRGCYC	1 cut(s)	56
EgeI	GGCGCC	1 cut(s)	1546
EheI	GGCGCC	1 cut(s)	1546
ErhI	CCWWGG	1 cut(s)	2845
Esp3I	CGTCTC	1 cut(s)	2905
FalI	AAGNNNNNCTT	4 cut(s)	1563, 1595, 2810, 2842
FaqI	GGGAC	4 cut(s)	1828, 2136, 2725, 2786
FauI	CCCGC	1 cut(s)	3247
FblI	GTMKAC	2 cut(s)	870, 1446
Fnu4HI	GCNGC	6 cut(s)	516, 1824, 1900, 1903, 2064, 2067
FokI	GGATG	9 cut(s)	170, 361, 389, 534, 1786, 1921, 2765, 2806, 2948
FriOI	GRGCYC	1 cut(s)	56
Fsp4HI	GCNGC	6 cut(s)	516, 1824, 1900, 1903, 2064, 2067
FspBI	CTAG	8 cut(s)	20, 468, 935, 2010, 2025, 2060, 2327, 2535
GlaI	GCGC	3 cut(s)	35, 650, 1546
GluI	GCNGC	6 cut(s)	516, 1824, 1900, 1903, 2064, 2067
GsaI	CCCAGC	1 cut(s)	421
GsuI	CTGGAG	3 cut(s)	105, 642, 1254
HaeII	RGCGCY	2 cut(s)	652, 1548
HaeIII	GGCC	5 cut(s)	29, 1098, 1517, 1798, 2839
HapII	CCGG	3 cut(s)	265, 1331, 2809
HgaI	GACGC	2 cut(s)	492, 3131
HhaI	GCGC	3 cut(s)	36, 651, 1547
Hin1I	GRCGYC	1 cut(s)	1545
Hin6I	GCGC	3 cut(s)	34, 649, 1545
HinP1I	GCGC	3 cut(s)	34, 649, 1545
HincII	GTYRAC	3 cut(s)	768, 1104, 1965
HindII	GTYRAC	3 cut(s)	768, 1104, 1965
HindIII	AAGCTT	4 cut(s)	356, 692, 1484, 1577
HpaI	GTTAAC	1 cut(s)	1104
HpaII	CCGG	3 cut(s)	265, 1331, 2809
HphI	GGTGA	6 cut(s)	167, 582, 594, 948, 1216, 1246
Hpy99I	CGWCG	2 cut(s)	508, 3147
HpyAV	CCTTC	5 cut(s)	19, 126, 197, 2726, 2815
HpyCH4IV	ACGT	7 cut(s)	486, 599, 988, 1088, 1762, 2898, 3179
HpyF10VI	GCNNNNNNNGC	6 cut(s)	229, 428, 671, 2414, 3065, 3251
HpySE526I	ACGT	7 cut(s)	486, 599, 988, 1088, 1762, 2898, 3179
Hsp92I	GRCGYC	1 cut(s)	1545
HspAI	GCGC	3 cut(s)	34, 649, 1545
KasI	GGCGCC	1 cut(s)	1544
Kpn2I	TCCGGA	2 cut(s)	1330, 2808
KpnI	GGTACC	1 cut(s)	1013
KspAI	GTTAAC	1 cut(s)	1104
Kzo9I	GATC	9 cut(s)	1015, 1160, 1216, 1249, 1333, 1354, 1478, 1913, 2323
Lsp1109I	GCAGC	5 cut(s)	527, 1835, 1886, 1889, 2075
LweI	GCATC	8 cut(s)	21, 558, 961, 1414, 1764, 1883, 2784, 2787
MaeI	CTAG	8 cut(s)	20, 468, 935, 2010, 2025, 2060, 2327, 2535
MaeII	ACGT	7 cut(s)	486, 599, 988, 1088, 1762, 2898, 3179
MalI	GATC	9 cut(s)	1017, 1162, 1218, 1251, 1335, 1356, 1480, 1915, 2325
MboI	GATC	9 cut(s)	1015, 1160, 1216, 1249, 1333, 1354, 1478, 1913, 2323
MflI	RGATCY	3 cut(s)	1160, 1249, 1333
MhlI	GDGCHC	5 cut(s)	56, 424, 449, 628, 3051
MlsI	TGGCCA	1 cut(s)	1798
MluNI	TGGCCA	1 cut(s)	1798
Mly113I	GGCGCC	1 cut(s)	1545
MlyI	GAGTC	9 cut(s)	81, 713, 1274, 1818, 2489, 2727, 2806, 2976, 3307
MmeI	TCCRAC	6 cut(s)	115, 345, 1332, 2233, 3125, 3290
Mox20I	TGGCCA	1 cut(s)	1798
Mph1103I	ATGCAT	3 cut(s)	907, 1395, 1429
MroI	TCCGGA	2 cut(s)	1330, 2808
MroXI	GAANNNNTTC	3 cut(s)	2211, 2362, 2374
MscI	TGGCCA	1 cut(s)	1798
MslI	CAYNNNNRTG	5 cut(s)	837, 1229, 1686, 2348, 2783
Msp20I	TGGCCA	1 cut(s)	1798
MspA1I	CMGCKG	3 cut(s)	125, 2582, 3254
MspI	CCGG	3 cut(s)	265, 1331, 2809
MspR9I	CCNGG	6 cut(s)	48, 153, 332, 725, 763, 1840
Mva1269I	GAATGC	1 cut(s)	1072
MvaI	CCWGG	6 cut(s)	48, 153, 332, 725, 763, 1840
MwoI	GCNNNNNNNGC	6 cut(s)	229, 428, 671, 2414, 3065, 3251
NarI	GGCGCC	1 cut(s)	1545
NdeII	GATC	9 cut(s)	1015, 1160, 1216, 1249, 1333, 1354, 1478, 1913, 2323
NheI	GCTAGC	1 cut(s)	2059
NlaIV	GGNNCC	5 cut(s)	1011, 1516, 1546, 1837, 3021
NmuCI	GTSAC	4 cut(s)	600, 954, 1198, 2603
NsiI	ATGCAT	3 cut(s)	907, 1395, 1429
NspI	RCATGY	9 cut(s)	227, 555, 659, 1199, 1343, 1367, 1830, 2631, 2995
NspV	TTCGAA	2 cut(s)	207, 3192
PaeI	GCATGC	2 cut(s)	555, 2995
PaqCI	CACCTGC	2 cut(s)	613, 778
PceI	AGGCCT	1 cut(s)	2839
PciI	ACATGT	1 cut(s)	1363
PcsI	WCGNNNNNNNCGW	3 cut(s)	2235, 3189, 3198
PctI	GAATGC	1 cut(s)	1072
PdmI	GAANNNNTTC	3 cut(s)	2211, 2362, 2374
PfeI	GAWTC	9 cut(s)	1037, 1221, 1659, 1934, 2018, 2370, 2575, 2619, 3267
PflFI	GACNNNGTC	1 cut(s)	1264
PflMI	CCANNNNNTGG	1 cut(s)	2728
PkrI	GCNGC	6 cut(s)	517, 1825, 1901, 1904, 2065, 2068
PleI	GAGTC	9 cut(s)	81, 712, 1273, 1817, 2489, 2726, 2806, 2975, 3307
PluTI	GGCGCC	1 cut(s)	1548
PpsI	GAGTC	9 cut(s)	81, 712, 1273, 1817, 2489, 2726, 2806, 2975, 3307
Ppu21I	YACGTR	1 cut(s)	989
PscI	ACATGT	1 cut(s)	1363
PsiI	TTATAA	1 cut(s)	321
Psp124BI	GAGCTC	1 cut(s)	56
Psp6I	CCWGG	6 cut(s)	46, 151, 330, 723, 761, 1838
PspFI	CCCAGC	1 cut(s)	417
PspGI	CCWGG	6 cut(s)	46, 151, 330, 723, 761, 1838
PspN4I	GGNNCC	5 cut(s)	1011, 1516, 1546, 1837, 3021
PspPI	GGNCC	4 cut(s)	28, 1096, 1515, 3335
PsrI	GAACNNNNNNTAC	2 cut(s)	2623, 2655
PstI	CTGCAG	1 cut(s)	981
PsuI	RGATCY	3 cut(s)	1160, 1249, 1333
PsyI	GACNNNGTC	1 cut(s)	1264
PvuII	CAGCTG	2 cut(s)	125, 2582
RseI	CAYNNNNRTG	5 cut(s)	837, 1229, 1686, 2348, 2783
SacI	GAGCTC	1 cut(s)	56
SatI	GCNGC	6 cut(s)	516, 1824, 1900, 1903, 2064, 2067
Sau3AI	GATC	9 cut(s)	1015, 1160, 1216, 1249, 1333, 1354, 1478, 1913, 2323
Sau96I	GGNCC	4 cut(s)	28, 1096, 1515, 3335
ScaI	AGTACT	1 cut(s)	2822
SchI	GAGTC	9 cut(s)	81, 713, 1274, 1818, 2489, 2727, 2806, 2976, 3307
ScrFI	CCNGG	6 cut(s)	48, 153, 332, 725, 763, 1840
SduI	GDGCHC	5 cut(s)	56, 424, 449, 628, 3051
SfaNI	GCATC	8 cut(s)	21, 558, 961, 1414, 1764, 1883, 2784, 2787
SfcI	CTRYAG	1 cut(s)	977
SfoI	GGCGCC	1 cut(s)	1546
SfuI	TTCGAA	2 cut(s)	207, 3192
SinI	GGWCC	1 cut(s)	3335
SmiMI	CAYNNNNRTG	5 cut(s)	837, 1229, 1686, 2348, 2783
SmlI	CTYRAG	3 cut(s)	945, 1732, 3220
SmoI	CTYRAG	3 cut(s)	945, 1732, 3220
SnaBI	TACGTA	1 cut(s)	989
SphI	GCATGC	2 cut(s)	555, 2995
SseBI	AGGCCT	1 cut(s)	2839
SsiI	CCGC	5 cut(s)	708, 2067, 2524, 2678, 3254
SspDI	GGCGCC	1 cut(s)	1544
SspMI	CTAG	8 cut(s)	20, 468, 935, 2010, 2025, 2060, 2327, 2535
SstI	GAGCTC	1 cut(s)	56
StuI	AGGCCT	1 cut(s)	2839
StyD4I	CCNGG	6 cut(s)	46, 151, 330, 723, 761, 1838
StyI	CCWWGG	1 cut(s)	2845
TaiI	ACGT	7 cut(s)	489, 602, 991, 1091, 1765, 2901, 3182
TatI	WGTACW	7 cut(s)	1030, 1148, 1500, 2820, 2985, 2997, 3349
TauI	GCSGC	1 cut(s)	2069
TfiI	GAWTC	9 cut(s)	1037, 1221, 1659, 1934, 2018, 2370, 2575, 2619, 3267
TseFI	GTSAC	4 cut(s)	600, 954, 1198, 2603
TseI	GCWGC	5 cut(s)	515, 1823, 1899, 1902, 2063
Tsp45I	GTSAC	4 cut(s)	600, 954, 1198, 2603
TspGWI	ACGGA	3 cut(s)	309, 942, 2730
Tth111I	GACNNNGTC	1 cut(s)	1264
Van91I	CCANNNNNTGG	1 cut(s)	2728
VpaK11BI	GGWCC	1 cut(s)	3335
XapI	RAATTY	5 cut(s)	1746, 1991, 2318, 2980, 3328
XceI	RCATGY	9 cut(s)	227, 555, 659, 1199, 1343, 1367, 1830, 2631, 2995
XcmI	CCANNNNNNNNNTGG	1 cut(s)	2467
XmiI	GTMKAC	2 cut(s)	870, 1446
XmnI	GAANNNNTTC	3 cut(s)	2211, 2362, 2374
XspI	CTAG	8 cut(s)	20, 468, 935, 2010, 2025, 2060, 2327, 2535
ZrmI	AGTACT	1 cut(s)	2822
Zsp2I	ATGCAT	3 cut(s)	907, 1395, 1429

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.