snRNA processing
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT4G20060 |
| fragaria_vesca | FvH4_4g05080 FvH4_4g05080 FvH4_4g05080 FvH4_4g05080 |
| malus_domestica | MD13G1224700.v1.1 MD16G1229900.v1.1 |
| prunus_persica | Prupe.3G104300_v2.0.a1 |
| pyrus_communis | pycom13g19830 pycom16g19170 |
| rosa_chinensis | RchiOBHm_Chr4g0396011 |
| rosa_laevigata | RLG00000009581 |
| rosa_multiflora | Rmu_sc0012989.1_g000013 Rmu_sc0015594.1_g000011 |
| rosa_roxburghii | Rroxscaffold_5G00340800 |
| rosa_rugosa | Rorug03G0352900 |
| rosa_samantha | Rh4BG063300 Rh4CG069900 Rh4CG070000 Rh4DG059900 |
| rosa_wichuraiana | Rw4G005230 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 718 |
| AasI | GACNNNNNNGTC | 2 cut(s) | 1364, 2945 |
| AatII | GACGTC | 1 cut(s) | 189 |
| Acc36I | ACCTGC | 1 cut(s) | 718 |
| AccB1I | GGYRCC | 1 cut(s) | 1505 |
| AccI | GTMKAC | 4 cut(s) | 979, 1407, 1461, 2976 |
| AccII | CGCG | 1 cut(s) | 815 |
| AccIII | TCCGGA | 2 cut(s) | 1291, 2787 |
| AciI | CCGC | 5 cut(s) | 44, 391, 813, 815, 2045 |
| AclWI | GGATC | 3 cut(s) | 1218, 1302, 1323 |
| AcsI | RAATTY | 7 cut(s) | 1707, 1949, 2297, 2810, 2905, 2959, 3292 |
| AcuI | CTGAAG | 4 cut(s) | 920, 1539, 2900, 2978 |
| AcyI | GRCGYC | 1 cut(s) | 186 |
| AdeI | CACNNNGTG | 1 cut(s) | 2707 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 423, 750, 2825, 3008 |
| AjiI | CACGTC | 1 cut(s) | 1050 |
| AjnI | CCWGG | 7 cut(s) | 157, 262, 828, 866, 1796, 2557, 2823 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 1828, 1860 |
| Alw21I | GWGCWC | 4 cut(s) | 733, 758, 2040, 2703 |
| Alw26I | GTCTC | 9 cut(s) | 167, 321, 1128, 1233, 1344, 1897, 1917, 1934, 2720 |
| Alw44I | GTGCAC | 1 cut(s) | 2699 |
| AlwI | GGATC | 3 cut(s) | 1218, 1302, 1323 |
| Ama87I | CYCGRG | 1 cut(s) | 1678 |
| Aor13HI | TCCGGA | 2 cut(s) | 1291, 2787 |
| AoxI | GGCC | 8 cut(s) | 19, 357, 1057, 1476, 1754, 2385, 2511, 2816 |
| ApaLI | GTGCAC | 1 cut(s) | 2699 |
| ApeKI | GCWGC | 8 cut(s) | 101, 620, 676, 940, 1781, 1857, 1860, 3261 |
| ApoI | RAATTY | 7 cut(s) | 1707, 1949, 2297, 2810, 2905, 2959, 3292 |
| AseI | ATTAAT | 1 cut(s) | 1248 |
| Asp700I | GAANNNNTTC | 3 cut(s) | 2190, 2341, 2353 |
| AspLEI | GCGC | 2 cut(s) | 147, 1642 |
| AspS9I | GGNCC | 6 cut(s) | 19, 357, 1057, 2101, 2511, 3314 |
| AsuHPI | GGTGA | 6 cut(s) | 278, 687, 699, 1177, 1994, 2099 |
| AsuNHI | GCTAGC | 1 cut(s) | 970 |
| AvaI | CYCGRG | 1 cut(s) | 1678 |
| AvaII | GGWCC | 2 cut(s) | 2101, 3314 |
| AxyI | CCTNAGG | 1 cut(s) | 2884 |
| BaeGI | GKGCMC | 2 cut(s) | 529, 2703 |
| BanI | GGYRCC | 1 cut(s) | 1505 |
| BanII | GRGCYC | 1 cut(s) | 2040 |
| BauI | CACGAG | 2 cut(s) | 732, 1155 |
| BbsI | GAAGAC | 1 cut(s) | 855 |
| Bbv12I | GWGCWC | 4 cut(s) | 733, 758, 2040, 2703 |
| BbvCI | CCTCAGC | 1 cut(s) | 449 |
| BbvI | GCAGC | 8 cut(s) | 113, 632, 663, 927, 1793, 1844, 1847, 3248 |
| BccI | CCATC | 9 cut(s) | 299, 889, 1111, 1159, 1186, 1517, 2048, 2729, 3134 |
| BcgI | CGANNNNNNTGC | 4 cut(s) | 1691, 1717, 1725, 1751 |
| BciT130I | CCWGG | 7 cut(s) | 159, 264, 830, 868, 1798, 2559, 2825 |
| BciVI | GTATCC | 2 cut(s) | 2228, 2254 |
| BcoDI | GTCTC | 9 cut(s) | 167, 321, 1128, 1233, 1344, 1897, 1917, 1934, 2720 |
| BfaI | CTAG | 9 cut(s) | 131, 537, 573, 971, 1364, 1968, 2004, 2153, 2306 |
| BfmI | CTRYAG | 3 cut(s) | 1462, 2622, 2977 |
| BfuAI | ACCTGC | 1 cut(s) | 718 |
| BfuI | GTATCC | 2 cut(s) | 2228, 2254 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 52 |
| BisI | GCNGC | 9 cut(s) | 102, 621, 677, 941, 1782, 1858, 1861, 2046, 3262 |
| BlsI | GCNGC | 9 cut(s) | 103, 622, 678, 942, 1783, 1859, 1862, 2047, 3263 |
| BmcAI | AGTACT | 1 cut(s) | 2801 |
| Bme1390I | CCNGG | 7 cut(s) | 159, 264, 830, 868, 1798, 2559, 2825 |
| Bme18I | GGWCC | 2 cut(s) | 2101, 3314 |
| BmeT110I | CYCGRG | 1 cut(s) | 1678 |
| BmgBI | CACGTC | 1 cut(s) | 1050 |
| BmgT120I | GGNCC | 6 cut(s) | 19, 357, 1057, 2101, 2511, 3314 |
| BmiI | GGNNCC | 7 cut(s) | 175, 200, 219, 1507, 1795, 2512, 3000 |
| BmrFI | CCNGG | 7 cut(s) | 159, 264, 830, 868, 1798, 2559, 2825 |
| BmtI | GCTAGC | 1 cut(s) | 974 |
| BoxI | GACNNNNGTC | 1 cut(s) | 1909 |
| BpiI | GAAGAC | 1 cut(s) | 855 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 1785, 1817 |
| BpmI | CTGGAG | 2 cut(s) | 747, 1215 |
| Bpu10I | CCTNAGC | 1 cut(s) | 449 |
| BpuEI | CTTGAG | 1 cut(s) | 1892 |
| BsaAI | YACGTR | 1 cut(s) | 65 |
| BsaBI | GATNNNNATC | 1 cut(s) | 2777 |
| BsaHI | GRCGYC | 1 cut(s) | 186 |
| BsaI | GGTCTC | 3 cut(s) | 167, 1128, 2720 |
| BsaJI | CCNNGG | 3 cut(s) | 813, 2730, 2824 |
| BsaWI | WCCGGW | 4 cut(s) | 375, 1291, 2787, 2949 |
| BsaXI | ACNNNNNCTCC | 8 cut(s) | 720, 750, 1024, 1054, 1213, 1243, 2148, 2178 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 423, 750, 2825, 3008 |
| Bse1I | ACTGG | 6 cut(s) | 1202, 1232, 2401, 2514, 2529, 3230 |
| Bse21I | CCTNAGG | 1 cut(s) | 2884 |
| Bse3DI | GCAATG | 2 cut(s) | 122, 843 |
| Bse8I | GATNNNNATC | 1 cut(s) | 2777 |
| BseAI | TCCGGA | 2 cut(s) | 1291, 2787 |
| BseBI | CCWGG | 7 cut(s) | 159, 264, 830, 868, 1798, 2559, 2825 |
| BseDI | CCNNGG | 3 cut(s) | 813, 2730, 2824 |
| BseJI | GATNNNNATC | 1 cut(s) | 2777 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 423, 750, 2825, 3008 |
| BseMI | GCAATG | 2 cut(s) | 122, 843 |
| BseMII | CTCAG | 8 cut(s) | 440, 902, 1014, 1044, 1215, 1507, 1887, 2898 |
| BseNI | ACTGG | 6 cut(s) | 1202, 1232, 2401, 2514, 2529, 3230 |
| BseRI | GAGGAG | 1 cut(s) | 1915 |
| BseSI | GKGCMC | 2 cut(s) | 529, 2703 |
| BseXI | GCAGC | 8 cut(s) | 113, 632, 663, 927, 1793, 1844, 1847, 3248 |
| BsgI | GTGCAG | 2 cut(s) | 2294, 3118 |
| Bsh1236I | CGCG | 1 cut(s) | 815 |
| BshFI | GGCC | 8 cut(s) | 21, 359, 1059, 1478, 1756, 2387, 2513, 2818 |
| BshNI | GGYRCC | 1 cut(s) | 1505 |
| BsiHKAI | GWGCWC | 4 cut(s) | 733, 758, 2040, 2703 |
| BsiHKCI | CYCGRG | 1 cut(s) | 1678 |
| BsiSI | CCGG | 4 cut(s) | 376, 1292, 2788, 2950 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 423, 750, 2825, 3008 |
| BsmAI | GTCTC | 9 cut(s) | 167, 321, 1128, 1233, 1344, 1897, 1917, 1934, 2720 |
| BsmBI | CGTCTC | 1 cut(s) | 1934 |
| BsmI | GAATGC | 2 cut(s) | 1033, 3313 |
| BsnI | GGCC | 8 cut(s) | 21, 359, 1059, 1478, 1756, 2387, 2513, 2818 |
| Bso31I | GGTCTC | 3 cut(s) | 167, 1128, 2720 |
| BsoBI | CYCGRG | 1 cut(s) | 1678 |
| Bsp1286I | GDGCHC | 5 cut(s) | 529, 733, 758, 2040, 2703 |
| Bsp13I | TCCGGA | 2 cut(s) | 1291, 2787 |
| Bsp1407I | TGTACA | 1 cut(s) | 3328 |
| Bsp143I | GATC | 9 cut(s) | 1161, 1177, 1210, 1294, 1315, 1439, 1871, 1954, 2302 |
| BspACI | CCGC | 5 cut(s) | 44, 391, 813, 815, 2045 |
| BspANI | GGCC | 8 cut(s) | 21, 359, 1059, 1478, 1756, 2387, 2513, 2818 |
| BspCNI | CTCAG | 8 cut(s) | 441, 901, 1015, 1045, 1216, 1506, 1888, 2897 |
| BspEI | TCCGGA | 2 cut(s) | 1291, 2787 |
| BspFNI | CGCG | 1 cut(s) | 815 |
| BspLI | GGNNCC | 7 cut(s) | 175, 200, 219, 1507, 1795, 2512, 3000 |
| BspMI | ACCTGC | 1 cut(s) | 718 |
| BspOI | GCTAGC | 1 cut(s) | 974 |
| BspPI | GGATC | 3 cut(s) | 1218, 1302, 1323 |
| BspQI | GCTCTTC | 1 cut(s) | 284 |
| BspT107I | GGYRCC | 1 cut(s) | 1505 |
| BspTNI | GGTCTC | 3 cut(s) | 167, 1128, 2720 |
| BsrDI | GCAATG | 2 cut(s) | 122, 843 |
| BsrGI | TGTACA | 1 cut(s) | 3328 |
| BsrI | ACTGG | 6 cut(s) | 1202, 1232, 2401, 2514, 2529, 3230 |
| BssECI | CCNNGG | 3 cut(s) | 813, 2730, 2824 |
| BssMI | GATC | 9 cut(s) | 1161, 1177, 1210, 1294, 1315, 1439, 1871, 1954, 2302 |
| BssNI | GRCGYC | 1 cut(s) | 186 |
| BssSI | CACGAG | 2 cut(s) | 732, 1155 |
| BssT1I | CCWWGG | 1 cut(s) | 2730 |
| Bst2BI | CACGAG | 2 cut(s) | 732, 1155 |
| Bst2UI | CCWGG | 7 cut(s) | 159, 264, 830, 868, 1798, 2559, 2825 |
| Bst4CI | ACNGT | 8 cut(s) | 207, 476, 861, 2030, 2642, 2981, 3084, 3328 |
| Bst6I | CTCTTC | 6 cut(s) | 44, 284, 374, 939, 1724, 2276 |
| BstACI | GRCGYC | 1 cut(s) | 186 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 533 |
| BstAUI | TGTACA | 1 cut(s) | 3328 |
| BstBAI | YACGTR | 1 cut(s) | 65 |
| BstC8I | GCNNGC | 6 cut(s) | 945, 972, 1256, 1758, 2567, 3209 |
| BstDSI | CCRYGG | 1 cut(s) | 813 |
| BstFNI | CGCG | 1 cut(s) | 815 |
| BstHHI | GCGC | 2 cut(s) | 147, 1642 |
| BstKTI | GATC | 9 cut(s) | 1164, 1180, 1213, 1297, 1318, 1442, 1874, 1957, 2305 |
| BstMAI | GTCTC | 9 cut(s) | 167, 321, 1128, 1233, 1344, 1897, 1917, 1934, 2720 |
| BstMBI | GATC | 9 cut(s) | 1161, 1177, 1210, 1294, 1315, 1439, 1871, 1954, 2302 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 52, 233, 533, 1028, 3044 |
| BstNI | CCWGG | 7 cut(s) | 159, 264, 830, 868, 1798, 2559, 2825 |
| BstNSI | RCATGY | 7 cut(s) | 108, 660, 792, 978, 1304, 1788, 2610 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 1909 |
| BstSCI | CCNGG | 7 cut(s) | 157, 262, 828, 866, 1796, 2557, 2823 |
| BstSFI | CTRYAG | 3 cut(s) | 1462, 2622, 2977 |
| BstSLI | GKGCMC | 2 cut(s) | 529, 2703 |
| BstUI | CGCG | 1 cut(s) | 815 |
| BstV1I | GCAGC | 8 cut(s) | 113, 632, 663, 927, 1793, 1844, 1847, 3248 |
| BstV2I | GAAGAC | 1 cut(s) | 855 |
| BstX2I | RGATCY | 2 cut(s) | 1210, 1294 |
| BstYI | RGATCY | 2 cut(s) | 1210, 1294 |
| Bsu36I | CCTNAGG | 1 cut(s) | 2884 |
| BsuI | GTATCC | 2 cut(s) | 2228, 2254 |
| BsuRI | GGCC | 8 cut(s) | 21, 359, 1059, 1478, 1756, 2387, 2513, 2818 |
| BtgI | CCRYGG | 1 cut(s) | 813 |
| BtgZI | GCGATG | 1 cut(s) | 594 |
| BtrI | CACGTC | 1 cut(s) | 1050 |
| BtsI | GCAGTG | 1 cut(s) | 1803 |
| BveI | ACCTGC | 1 cut(s) | 718 |
| Cac8I | GCNNGC | 6 cut(s) | 945, 972, 1256, 1758, 2567, 3209 |
| CfoI | GCGC | 2 cut(s) | 147, 1642 |
| Cfr13I | GGNCC | 6 cut(s) | 19, 357, 1057, 2101, 2511, 3314 |
| Cfr42I | CCGCGG | 1 cut(s) | 816 |
| CseI | GACGC | 1 cut(s) | 3110 |
| CsiI | ACCWGGT | 1 cut(s) | 157 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 51, 86 |
| DpnI | GATC | 9 cut(s) | 1163, 1179, 1212, 1296, 1317, 1441, 1873, 1956, 2304 |
| DpnII | GATC | 9 cut(s) | 1161, 1177, 1210, 1294, 1315, 1439, 1871, 1954, 2302 |
| DraI | TTTAAA | 1 cut(s) | 2809 |
| DraIII | CACNNNGTG | 1 cut(s) | 2707 |
| DrdI | GACNNNNNNGTC | 2 cut(s) | 1364, 2945 |
| DseDI | GACNNNNNNGTC | 2 cut(s) | 1364, 2945 |
| Eam1104I | CTCTTC | 6 cut(s) | 44, 284, 374, 939, 1724, 2276 |
| EarI | CTCTTC | 6 cut(s) | 44, 284, 374, 939, 1724, 2276 |
| Ecl136II | GAGCTC | 1 cut(s) | 2038 |
| Eco130I | CCWWGG | 1 cut(s) | 2730 |
| Eco147I | AGGCCT | 1 cut(s) | 2818 |
| Eco24I | GRGCYC | 1 cut(s) | 2040 |
| Eco31I | GGTCTC | 3 cut(s) | 167, 1128, 2720 |
| Eco47I | GGWCC | 2 cut(s) | 2101, 3314 |
| Eco53kI | GAGCTC | 1 cut(s) | 2038 |
| Eco57I | CTGAAG | 4 cut(s) | 920, 1539, 2900, 2978 |
| Eco81I | CCTNAGG | 1 cut(s) | 2884 |
| Eco88I | CYCGRG | 1 cut(s) | 1678 |
| EcoICRI | GAGCTC | 1 cut(s) | 2038 |
| EcoO109I | RGGNCCY | 3 cut(s) | 19, 357, 1057 |
| EcoRII | CCWGG | 7 cut(s) | 157, 262, 828, 866, 1796, 2557, 2823 |
| EcoT14I | CCWWGG | 1 cut(s) | 2730 |
| EcoT22I | ATGCAT | 1 cut(s) | 1390 |
| EcoT38I | GRGCYC | 1 cut(s) | 2040 |
| ErhI | CCWWGG | 1 cut(s) | 2730 |
| Esp3I | CGTCTC | 1 cut(s) | 1934 |
| FalI | AAGNNNNNCTT | 6 cut(s) | 1524, 1556, 2723, 2755, 2789, 2821 |
| FauI | CCCGC | 1 cut(s) | 51 |
| FauNDI | CATATG | 2 cut(s) | 684, 1348 |
| FblI | GTMKAC | 4 cut(s) | 979, 1407, 1461, 2976 |
| Fnu4HI | GCNGC | 9 cut(s) | 102, 621, 677, 941, 1782, 1858, 1861, 2046, 3262 |
| FriOI | GRGCYC | 1 cut(s) | 2040 |
| Fsp4HI | GCNGC | 9 cut(s) | 102, 621, 677, 941, 1782, 1858, 1861, 2046, 3262 |
| FspBI | CTAG | 9 cut(s) | 131, 537, 573, 971, 1364, 1968, 2004, 2153, 2306 |
| GlaI | GCGC | 2 cut(s) | 146, 1641 |
| GluI | GCNGC | 9 cut(s) | 102, 621, 677, 941, 1782, 1858, 1861, 2046, 3262 |
| GsuI | CTGGAG | 2 cut(s) | 747, 1215 |
| HaeIII | GGCC | 8 cut(s) | 21, 359, 1059, 1478, 1756, 2387, 2513, 2818 |
| HapII | CCGG | 4 cut(s) | 376, 1292, 2788, 2950 |
| HgaI | GACGC | 1 cut(s) | 3110 |
| HhaI | GCGC | 2 cut(s) | 147, 1642 |
| Hin1I | GRCGYC | 1 cut(s) | 186 |
| Hin6I | GCGC | 2 cut(s) | 145, 1640 |
| HinP1I | GCGC | 2 cut(s) | 145, 1640 |
| HincII | GTYRAC | 3 cut(s) | 873, 1633, 1923 |
| HindII | GTYRAC | 3 cut(s) | 873, 1633, 1923 |
| HindIII | AAGCTT | 4 cut(s) | 461, 797, 1445, 1538 |
| HpaI | GTTAAC | 1 cut(s) | 1633 |
| HpaII | CCGG | 4 cut(s) | 376, 1292, 2788, 2950 |
| HphI | GGTGA | 6 cut(s) | 278, 687, 699, 1177, 1994, 2099 |
| Hpy99I | CGWCG | 2 cut(s) | 191, 3126 |
| HpyCH4III | ACNGT | 8 cut(s) | 207, 476, 861, 2030, 2642, 2981, 3084, 3328 |
| HpyCH4IV | ACGT | 6 cut(s) | 64, 186, 591, 704, 1049, 3166 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 52, 233, 533, 1028, 3044 |
| HpySE526I | ACGT | 6 cut(s) | 64, 186, 591, 704, 1049, 3166 |
| Hsp92I | GRCGYC | 1 cut(s) | 186 |
| HspAI | GCGC | 2 cut(s) | 145, 1640 |
| Kpn2I | TCCGGA | 2 cut(s) | 1291, 2787 |
| KspAI | GTTAAC | 1 cut(s) | 1633 |
| KspI | CCGCGG | 1 cut(s) | 816 |
| Kzo9I | GATC | 9 cut(s) | 1161, 1177, 1210, 1294, 1315, 1439, 1871, 1954, 2302 |
| LguI | GCTCTTC | 1 cut(s) | 284 |
| Lsp1109I | GCAGC | 8 cut(s) | 113, 632, 663, 927, 1793, 1844, 1847, 3248 |
| MabI | ACCWGGT | 1 cut(s) | 157 |
| MaeI | CTAG | 9 cut(s) | 131, 537, 573, 971, 1364, 1968, 2004, 2153, 2306 |
| MaeII | ACGT | 6 cut(s) | 64, 186, 591, 704, 1049, 3166 |
| MaeIII | GTNAC | 7 cut(s) | 705, 1608, 1658, 2308, 2516, 3078, 3088 |
| MalI | GATC | 9 cut(s) | 1163, 1179, 1212, 1296, 1317, 1441, 1873, 1956, 2304 |
| MboI | GATC | 9 cut(s) | 1161, 1177, 1210, 1294, 1315, 1439, 1871, 1954, 2302 |
| MfeI | CAATTG | 1 cut(s) | 1716 |
| MflI | RGATCY | 2 cut(s) | 1210, 1294 |
| MhlI | GDGCHC | 5 cut(s) | 529, 733, 758, 2040, 2703 |
| MlyI | GAGTC | 8 cut(s) | 336, 818, 1235, 1776, 1899, 2468, 2785, 2955 |
| MmeI | TCCRAC | 5 cut(s) | 226, 309, 1199, 2212, 3269 |
| Mph1103I | ATGCAT | 1 cut(s) | 1390 |
| MroI | TCCGGA | 2 cut(s) | 1291, 2787 |
| MroXI | GAANNNNTTC | 3 cut(s) | 2190, 2341, 2353 |
| MslI | CAYNNNNRTG | 4 cut(s) | 1190, 1647, 2327, 2762 |
| MspA1I | CMGCKG | 3 cut(s) | 815, 940, 2045 |
| MspI | CCGG | 4 cut(s) | 376, 1292, 2788, 2950 |
| MspR9I | CCNGG | 7 cut(s) | 159, 264, 830, 868, 1798, 2559, 2825 |
| MunI | CAATTG | 1 cut(s) | 1716 |
| Mva1269I | GAATGC | 2 cut(s) | 1033, 3313 |
| MvaI | CCWGG | 7 cut(s) | 159, 264, 830, 868, 1798, 2559, 2825 |
| MvnI | CGCG | 1 cut(s) | 815 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 52, 233, 533, 1028, 3044 |
| NdeI | CATATG | 2 cut(s) | 684, 1348 |
| NdeII | GATC | 9 cut(s) | 1161, 1177, 1210, 1294, 1315, 1439, 1871, 1954, 2302 |
| NheI | GCTAGC | 1 cut(s) | 970 |
| NlaIV | GGNNCC | 7 cut(s) | 175, 200, 219, 1507, 1795, 2512, 3000 |
| NmeAIII | GCCGAG | 2 cut(s) | 77, 661 |
| NmuCI | GTSAC | 1 cut(s) | 705 |
| NsiI | ATGCAT | 1 cut(s) | 1390 |
| NspI | RCATGY | 7 cut(s) | 108, 660, 792, 978, 1304, 1788, 2610 |
| PaqCI | CACCTGC | 1 cut(s) | 718 |
| PceI | AGGCCT | 1 cut(s) | 2818 |
| PciSI | GCTCTTC | 1 cut(s) | 284 |
| PctI | GAATGC | 2 cut(s) | 1033, 3313 |
| PdmI | GAANNNNTTC | 3 cut(s) | 2190, 2341, 2353 |
| PflFI | GACNNNGTC | 1 cut(s) | 1225 |
| PkrI | GCNGC | 9 cut(s) | 103, 622, 678, 942, 1783, 1859, 1862, 2047, 3263 |
| PleI | GAGTC | 8 cut(s) | 336, 817, 1234, 1775, 1899, 2468, 2785, 2954 |
| PpsI | GAGTC | 8 cut(s) | 336, 817, 1234, 1775, 1899, 2468, 2785, 2954 |
| Ppu21I | YACGTR | 1 cut(s) | 65 |
| PshAI | GACNNNNGTC | 1 cut(s) | 1909 |
| PshBI | ATTAAT | 1 cut(s) | 1248 |
| Psp124BI | GAGCTC | 1 cut(s) | 2040 |
| Psp6I | CCWGG | 7 cut(s) | 157, 262, 828, 866, 1796, 2557, 2823 |
| PspGI | CCWGG | 7 cut(s) | 157, 262, 828, 866, 1796, 2557, 2823 |
| PspN4I | GGNNCC | 7 cut(s) | 175, 200, 219, 1507, 1795, 2512, 3000 |
| PspPI | GGNCC | 6 cut(s) | 19, 357, 1057, 2101, 2511, 3314 |
| PsrI | GAACNNNNNNTAC | 4 cut(s) | 1824, 1856, 2602, 2634 |
| PsuI | RGATCY | 2 cut(s) | 1210, 1294 |
| PsyI | GACNNNGTC | 1 cut(s) | 1225 |
| PvuII | CAGCTG | 1 cut(s) | 940 |
| RseI | CAYNNNNRTG | 4 cut(s) | 1190, 1647, 2327, 2762 |
| SacI | GAGCTC | 1 cut(s) | 2040 |
| SacII | CCGCGG | 1 cut(s) | 816 |
| SapI | GCTCTTC | 1 cut(s) | 284 |
| SatI | GCNGC | 9 cut(s) | 102, 621, 677, 941, 1782, 1858, 1861, 2046, 3262 |
| Sau3AI | GATC | 9 cut(s) | 1161, 1177, 1210, 1294, 1315, 1439, 1871, 1954, 2302 |
| Sau96I | GGNCC | 6 cut(s) | 19, 357, 1057, 2101, 2511, 3314 |
| ScaI | AGTACT | 1 cut(s) | 2801 |
| SchI | GAGTC | 8 cut(s) | 336, 818, 1235, 1776, 1899, 2468, 2785, 2955 |
| ScrFI | CCNGG | 7 cut(s) | 159, 264, 830, 868, 1798, 2559, 2825 |
| SduI | GDGCHC | 5 cut(s) | 529, 733, 758, 2040, 2703 |
| SexAI | ACCWGGT | 1 cut(s) | 157 |
| SfcI | CTRYAG | 3 cut(s) | 1462, 2622, 2977 |
| Sfr303I | CCGCGG | 1 cut(s) | 816 |
| SgrBI | CCGCGG | 1 cut(s) | 816 |
| SinI | GGWCC | 2 cut(s) | 2101, 3314 |
| SmiMI | CAYNNNNRTG | 4 cut(s) | 1190, 1647, 2327, 2762 |
| SmlI | CTYRAG | 1 cut(s) | 1907 |
| SmoI | CTYRAG | 1 cut(s) | 1907 |
| SseBI | AGGCCT | 1 cut(s) | 2818 |
| SsiI | CCGC | 5 cut(s) | 44, 391, 813, 815, 2045 |
| SspMI | CTAG | 9 cut(s) | 131, 537, 573, 971, 1364, 1968, 2004, 2153, 2306 |
| SstI | GAGCTC | 1 cut(s) | 2040 |
| StuI | AGGCCT | 1 cut(s) | 2818 |
| StyD4I | CCNGG | 7 cut(s) | 157, 262, 828, 866, 1796, 2557, 2823 |
| StyI | CCWWGG | 1 cut(s) | 2730 |
| TaaI | ACNGT | 8 cut(s) | 207, 476, 861, 2030, 2642, 2981, 3084, 3328 |
| TaiI | ACGT | 6 cut(s) | 67, 189, 594, 707, 1052, 3169 |
| TaqI | TCGA | 9 cut(s) | 126, 252, 1180, 1282, 1548, 1618, 1821, 2427, 3124 |
| TaqII | GACCGA | 1 cut(s) | 2435 |
| TatI | WGTACW | 7 cut(s) | 1109, 2258, 2393, 2799, 2964, 3101, 3328 |
| TauI | GCSGC | 1 cut(s) | 2048 |
| TseFI | GTSAC | 1 cut(s) | 705 |
| TseI | GCWGC | 8 cut(s) | 101, 620, 676, 940, 1781, 1857, 1860, 3261 |
| Tsp45I | GTSAC | 1 cut(s) | 705 |
| TspGWI | ACGGA | 1 cut(s) | 2709 |
| Tth111I | GACNNNGTC | 1 cut(s) | 1225 |
| VneI | GTGCAC | 1 cut(s) | 2699 |
| VpaK11BI | GGWCC | 2 cut(s) | 2101, 3314 |
| VspI | ATTAAT | 1 cut(s) | 1248 |
| XapI | RAATTY | 7 cut(s) | 1707, 1949, 2297, 2810, 2905, 2959, 3292 |
| XceI | RCATGY | 7 cut(s) | 108, 660, 792, 978, 1304, 1788, 2610 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 2446 |
| XmiI | GTMKAC | 4 cut(s) | 979, 1407, 1461, 2976 |
| XmnI | GAANNNNTTC | 3 cut(s) | 2190, 2341, 2353 |
| XspI | CTAG | 9 cut(s) | 131, 537, 573, 971, 1364, 1968, 2004, 2153, 2306 |
| ZraI | GACGTC | 1 cut(s) | 187 |
| ZrmI | AGTACT | 1 cut(s) | 2801 |
| Zsp2I | ATGCAT | 1 cut(s) | 1390 |