pycom13g19830

snRNA processing

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr13
OG0010119
Physical Location & Seq
Forward (+)
15779333 .. 15783034
3702 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom13g19830.1

Sequence Viewer

Length: 3159 bp
ATGGAAAGGAGCTCAGCAGCACGTGTGGTGGAATGGAGCATCAAGCTAGAGAAGGCCCTGCGCTCCAGGAAACCAGGGAGCTCACTCGAAGCCATTTCGGAAATCAGTGCAAGAATCCAACGGTTATGCAGAGAGCCAGAGCCTTCTCCAGCTGTCCACCATCTGTTCGACCTAATTCCTGGCGAGGACAAGCTCTTTTTAAATGCCATCATCCTTCGTATTGCCAACGCTTTCGAATGTGGAGACAAGCATATAAGGCTCTGTATTGTCAAGGCTTTTCTGTTTGAGTACCGGAAGAGGAACAAAAGGAAAGAGTACAACGGAGTTTTCTCCAAGACTCGGGTTTATACGCAGGCGGAATTGCTGAGGATGGTTAAGCTTGTGTTTGACGGTGGGGATGTTGAGGATAGGGCTTTGGCTTTGGGTCTGTTCGGTTGCTGGGCACATTTTGCTAAAGAGAGTTCGAGCACACGCTACTCGGTGCTTTCTAGTTTGGTTTCCTCACACGTTATGGAGGTAAAAGCGTCGTTATTTGCAGCAGGATGTTTTTCCGAGTTATCAGAGGACTTTGCATGCGTTGTCTTGGAGATGCTGCCTCGTATGATGACTTCACCGGAAACGTCACCTGCTATAAGGTTGGCTGGAGCACGAGTATTTGCCAAACTTGGATGCTCACATGCTCTTGCAAATAATGCTTACAAGATTTGCCTAAAGCTTCTGCTAGAGTCCGCGGATGAGGATTGCCATGTTGCAATGCTGGTTTCTCTCTCCAAACTGGCTTCCAGGTCAACCCTTCTTATATCTCAGCAGGTAATTGTTTTTGGTAGCATATTCTTTCAAATTTCTCGATTCGTAATACTCATTGGCATCTGGATGCAGGTGGACTTGCTTCTCTTGTTTCTTAGCCAAGAAAAACCTCTTCATCTGCGTGCAACGGCAGTAAGAAGCTTGCATTTTATATACAGTCAAGGAATGTGTCATTTTCCTTTAAATGCATATCTTGTGAGAGCGTTATTTAACATACTAGATGAACCTCAAGTTCCGTCACCCATGCTATGTGATGCACTGCAGACTTTACGTAAGATTATTTCATGTACGGTACCCGATCTACCCTTTGATGTACTTGAATCTTCTAAGCTGTTAAGCGTTGTTGAGAATGCAACTTCATCTCCAATCACGTCTGAGGGCCTGTTAGCTTTTTCTGTTTTGGTAGATGTTTCAAGGAAACTAAGGGGAAGTACAGAGATGGGATCTCTTGCACCTCATTCCTCTCTTCTGCCATCTCATGTGACCTCACTTGTCATTGATCGAATCACCTTAATGGTGAAGCCAGTTTTGGATCTTTGTCAGACCGAGTCTCCAGTGTTTCAACAAGTTAATTGCCTGCTCAATCTTCTTTTCTTTCTAAGTCGAGAATATCCGGATCTGCATGTCTTTGTGTTGGATCAAATACATGTTTTGGTCAAGTCTTTCTCATATATGCATGACAATCGGGTCGTTACATCAGAAGCAGATGCATTTGTTCGTGATAATGTAGACTTGAAAGGAGAAAAAAGCAGAACTATCAGATCAAAGCTTCTATTTATTGTGTACAGATTTTTGGGGGCCTTTCTTGAAAATCTCAGTGAAGCTGGCGCCATCTCCACCAAAGTATTTGACAAAGTGAAGCTTCTGGTTGAACTTGTAAGTCAGAGCAACTTGCTTGAATGTTATACATACACACTTTACTCTTTGTTGTTACATTGTCGAATCATTTGGGATAACATGGTGCATGAGACTGAGGGAAGTTACAATCTTGATAAGAACTCGGGCATATCTCACTCAAGGGAGCATGAAATTCGTACCATTGAACATGCAAAGAGGATGCTCACAGAAAACAATAAGTGGCCAGCTTACAGAGTCGGGACTTATGCAGCATGTCAGGGAGCCTGGCTCACTGCCACTATGACATTTGAGCAGTTAGTCTCAATGGTTCATTCGATTTCCTGCTGCTGCTGGATGAGATCATTAGTTCAATTTTCGGATTCTGAGAGGAAACTCATGTTGCTGCTGTTGACAAAACAAGGTATAGAGACACATAAATTCGATGTTAGACTTTCTAGTAATGATTCAGCTAGTAACATCAGGGAGCATATTAACAGTAGGGAGCTAGCAGCCGCTTACAATGGTCTTTGTTCTTCTTTGGCAACGTTAAAAGTTGATGTCAGAATGGGACAAACTTTTTATTTCCAAAGGTGGTTTTTGTCTTTAAGAGCAAAGGTGCTTGGAGCAGTGGTGGATATAGTTAAAGTTCTGGAAAACATTCAATTTGACCAGCACGACATTCCCAATAATGGACAGGTTGGATACCTCGTATCCTTACAGAAGTTTACTCGAATATCTGTGCAGTTGAAGAGGCTATCACAAGAATTTGATCGATCAATAGTAACAAAATCTTTCATTGACATGGACAGAAAAAGTTCAGGAATCATTTCAGAACTCACACTATCTTGTTCACTGTTGGCTTTTTGTACTGGTTTTTCTCTCTACATTCCAAGCCTAATCAAATCTGTTTCCATTAACGGTCTGGGAACAACAGAGAACAATTTAGACTCAATGTTGATACAAAATCTAATTGGGCGGTTGGGGGCTAGTAACCATGAAACCAGTGCAAATCTTTATCTGCTTTTGAATCCAGTTGGCAATCCCATTGATTGTTGTCACTTGCAGTCGAGAATCCAAGCATGTAAGGTTGGTTCTGAAGCAAAATATATTCTCAGTGTTTGTAGTTATGCGGTTTCAGGGATTTCTGGGTTGAAAAGCAAGGCAAACGGAGTCCACAATGTGGAAGGTCTGTCCCAAGCAACCAAAGACGGCGTACAACTTCTGTATAGCATCCTTATGAAATGGATGCGAATCCCCTTCCGGACTCCCAAGTACTTCTTTAAATTAAGGCCTTACCTTGGGTCAGAACTCTTCGCTGTCAATGAAACAAGAAACCCAGATGGAATATACGGGCTTCCACTTATCATTACATTTGTGTCTTCAGTTAAGAAATGTGCCACCAGACATCCGAGTCCGGTTGAAAAGTTTGTACTACATGCTTTACAGTGGAGTATCCTTTCAGGAGCCAAGAGGAAGTGGAGAAAACAGGGAGCAAAAGCAGGCTTGGGAAGCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

1053

Amino Acids

117.9

Weight (kDa)

8.98

Isoelectric Point (pI)

41.89

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
INTS7_N PF24436 15 - 496 1.1e-31 Integrator complex subunit 7, N-terminal
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 2 cut(s) 634, 868
AasI GACNNNNNNGTC 2 cut(s) 1493, 3054
Acc36I ACCTGC 3 cut(s) 634, 799, 868
Acc65I GGTACC 1 cut(s) 1099
AccB1I GGYRCC 2 cut(s) 1099, 1634
AccB7I CCANNNNNTGG 1 cut(s) 2824
AccI GTMKAC 1 cut(s) 1536
AccII CGCG 1 cut(s) 731
AccIII TCCGGA 2 cut(s) 1420, 2904
AciI CCGC 6 cut(s) 356, 729, 731, 2157, 2620, 2774
AclI AACGTT 1 cut(s) 2189
AclWI GGATC 4 cut(s) 1258, 1347, 1431, 1452
AcoI YGGCCR 1 cut(s) 1886
AcsI RAATTY 4 cut(s) 840, 1836, 2081, 2408
AcuI CTGAAG 2 cut(s) 2760, 3009
AcvI CACGTG 1 cut(s) 23
AcyI GRCGYC 1 cut(s) 1635
AdeI CACNNNGTG 1 cut(s) 2824
AfiI CCNNNNNNNGG 4 cut(s) 339, 2333, 2824, 2942
AflIII ACRYGT 3 cut(s) 22, 505, 1453
AjiI CACGTC 1 cut(s) 1179
AjnI CCWGG 5 cut(s) 65, 73, 178, 782, 1928
AjuI GAANNNNNNNTTGG 2 cut(s) 1319, 1351
Alw21I GWGCWC 4 cut(s) 14, 83, 470, 649
Alw26I GTCTC 5 cut(s) 237, 1362, 1769, 1969, 2066
AlwI GGATC 4 cut(s) 1258, 1347, 1431, 1452
Ama87I CYCGRG 2 cut(s) 339, 1807
Aor13HI TCCGGA 2 cut(s) 1420, 2904
AoxI GGCC 5 cut(s) 54, 1186, 1605, 1886, 2933
ApeKI GCWGC 8 cut(s) 17, 536, 592, 1913, 1989, 1992, 2047, 2153
ApoI RAATTY 4 cut(s) 840, 1836, 2081, 2408
Asp700I GAANNNNTTC 3 cut(s) 2301, 2458, 2470
Asp718I GGTACC 1 cut(s) 1099
AspLEI GCGC 2 cut(s) 63, 1637
AspS9I GGNCC 3 cut(s) 55, 1186, 1605
AsuHPI GGTGA 5 cut(s) 603, 615, 1038, 1306, 1336
AsuII TTCGAA 1 cut(s) 234
AsuNHI GCTAGC 1 cut(s) 2149
AvaI CYCGRG 2 cut(s) 339, 1807
BaeGI GKGCMC 1 cut(s) 445
BalI TGGCCA 1 cut(s) 1888
BanI GGYRCC 2 cut(s) 1099, 1634
BanII GRGCYC 2 cut(s) 14, 83
BarI GAAGNNNNNNTAC 2 cut(s) 592, 624
BauI CACGAG 1 cut(s) 648
BbrPI CACGTG 1 cut(s) 23
BbsI GAAGAC 1 cut(s) 3015
Bbv12I GWGCWC 4 cut(s) 14, 83, 470, 649
BbvCI CCTCAGC 1 cut(s) 365
BbvI GCAGC 8 cut(s) 29, 548, 579, 1925, 1976, 1979, 2034, 2165
BccI CCATC 7 cut(s) 168, 215, 364, 1240, 1288, 1646, 2978
BceAI ACGGC 2 cut(s) 951, 2869
BcgI CGANNNNNNTGC 4 cut(s) 1472, 1506, 1820, 1854
BciT130I CCWGG 5 cut(s) 67, 75, 180, 784, 1930
BciVI GTATCC 3 cut(s) 2339, 2365, 3107
BcoDI GTCTC 5 cut(s) 237, 1362, 1769, 1969, 2066
BfaI CTAG 8 cut(s) 47, 489, 722, 1025, 2100, 2115, 2150, 2631
BfmI CTRYAG 1 cut(s) 1067
BfoI RGCGCY 1 cut(s) 1638
BfuAI ACCTGC 3 cut(s) 634, 799, 868
BfuI GTATCC 3 cut(s) 2339, 2365, 3107
BisI GCNGC 9 cut(s) 18, 537, 593, 1914, 1990, 1993, 2048, 2154, 2157
BlpI GCTNAGC 1 cut(s) 13
BlsI GCNGC 9 cut(s) 19, 538, 594, 1915, 1991, 1994, 2049, 2155, 2158
BmcAI AGTACT 1 cut(s) 2918
Bme1390I CCNGG 5 cut(s) 67, 75, 180, 784, 1930
BmeT110I CYCGRG 2 cut(s) 339, 1807
BmgBI CACGTC 1 cut(s) 1179
BmgT120I GGNCC 3 cut(s) 55, 1186, 1605
BmiI GGNNCC 5 cut(s) 1101, 1606, 1636, 1927, 3109
BmrFI CCNGG 5 cut(s) 67, 75, 180, 784, 1930
BmtI GCTAGC 1 cut(s) 2153
BpiI GAAGAC 1 cut(s) 3015
BplI GAGNNNNNCTC 2 cut(s) 1917, 1949
BpmI CTGGAG 4 cut(s) 49, 132, 663, 1344
Bpu10I CCTNAGC 1 cut(s) 365
Bpu1102I GCTNAGC 1 cut(s) 13
Bpu14I TTCGAA 1 cut(s) 234
BpuEI CTTGAG 2 cut(s) 1020, 1807
Bsa29I ATCGAT 1 cut(s) 2416
BsaAI YACGTR 2 cut(s) 23, 1079
BsaBI GATNNNNATC 1 cut(s) 2894
BsaHI GRCGYC 1 cut(s) 1635
BsaJI CCNNGG 3 cut(s) 74, 729, 2941
BsaWI WCCGGW 5 cut(s) 291, 613, 1420, 2904, 3058
BsaXI ACNNNNNCTCC 8 cut(s) 636, 666, 1153, 1183, 1342, 1372, 2259, 2289
Bsc4I CCNNNNNNNGG 4 cut(s) 339, 2333, 2824, 2942
Bse1I ACTGG 6 cut(s) 780, 1331, 1361, 2518, 2646, 2675
Bse3DI GCAATG 1 cut(s) 759
Bse8I GATNNNNATC 1 cut(s) 2894
BseAI TCCGGA 2 cut(s) 1420, 2904
BseBI CCWGG 5 cut(s) 67, 75, 180, 784, 1930
BseCI ATCGAT 1 cut(s) 2416
BseDI CCNNGG 3 cut(s) 74, 729, 2941
BseJI GATNNNNATC 1 cut(s) 2894
BseLI CCNNNNNNNGG 4 cut(s) 339, 2333, 2824, 2942
BseMI GCAATG 1 cut(s) 759
BseMII CTCAG 8 cut(s) 27, 356, 818, 1173, 1636, 1770, 2019, 2770
BseNI ACTGG 6 cut(s) 780, 1331, 1361, 2518, 2646, 2675
BseSI GKGCMC 1 cut(s) 445
BseXI GCAGC 8 cut(s) 29, 548, 579, 1925, 1976, 1979, 2034, 2165
BseYI CCCAGC 1 cut(s) 438
BsgI GTGCAG 1 cut(s) 2405
Bsh1236I CGCG 1 cut(s) 731
BshFI GGCC 5 cut(s) 56, 1188, 1607, 1888, 2935
BshNI GGYRCC 2 cut(s) 1099, 1634
BshVI ATCGAT 1 cut(s) 2416
BsiHKAI GWGCWC 4 cut(s) 14, 83, 470, 649
BsiHKCI CYCGRG 2 cut(s) 339, 1807
BsiSI CCGG 5 cut(s) 292, 614, 1421, 2905, 3059
BslFI GGGAC 3 cut(s) 1918, 2226, 2821
BslI CCNNNNNNNGG 4 cut(s) 339, 2333, 2824, 2942
BsmAI GTCTC 5 cut(s) 237, 1362, 1769, 1969, 2066
BsmFI GGGAC 3 cut(s) 1918, 2226, 2821
BsmI GAATGC 1 cut(s) 1162
BsnI GGCC 5 cut(s) 56, 1188, 1607, 1888, 2935
BsoBI CYCGRG 2 cut(s) 339, 1807
Bsp119I TTCGAA 1 cut(s) 234
Bsp1286I GDGCHC 5 cut(s) 14, 83, 445, 470, 649
Bsp13I TCCGGA 2 cut(s) 1420, 2904
Bsp1407I TGTACA 1 cut(s) 1590
Bsp1720I GCTNAGC 1 cut(s) 13
BspACI CCGC 6 cut(s) 356, 729, 731, 2157, 2620, 2774
BspANI GGCC 5 cut(s) 56, 1188, 1607, 1888, 2935
BspCNI CTCAG 8 cut(s) 26, 357, 817, 1174, 1635, 1771, 2020, 2769
BspDI ATCGAT 1 cut(s) 2416
BspEI TCCGGA 2 cut(s) 1420, 2904
BspFNI CGCG 1 cut(s) 731
BspLI GGNNCC 5 cut(s) 1101, 1606, 1636, 1927, 3109
BspMAI CTGCAG 1 cut(s) 1071
BspMI ACCTGC 3 cut(s) 634, 799, 868
BspOI GCTAGC 1 cut(s) 2153
BspPI GGATC 4 cut(s) 1258, 1347, 1431, 1452
BspT104I TTCGAA 1 cut(s) 234
BspT107I GGYRCC 2 cut(s) 1099, 1634
BsrDI GCAATG 1 cut(s) 759
BsrGI TGTACA 1 cut(s) 1590
BsrI ACTGG 6 cut(s) 780, 1331, 1361, 2518, 2646, 2675
BssECI CCNNGG 3 cut(s) 74, 729, 2941
BssNI GRCGYC 1 cut(s) 1635
BssSI CACGAG 1 cut(s) 648
BssT1I CCWWGG 1 cut(s) 2941
Bst2BI CACGAG 1 cut(s) 648
Bst2UI CCWGG 5 cut(s) 67, 75, 180, 784, 1930
Bst4CI ACNGT 8 cut(s) 123, 392, 965, 1099, 2141, 2499, 2564, 3090
Bst6I CTCTTC 5 cut(s) 290, 924, 1278, 2387, 2960
BstACI GRCGYC 1 cut(s) 1635
BstAPI GCANNNNNTGC 2 cut(s) 449, 692
BstAUI TGTACA 1 cut(s) 1590
BstBAI YACGTR 2 cut(s) 23, 1079
BstBI TTCGAA 1 cut(s) 234
BstC8I GCNNGC 9 cut(s) 354, 574, 930, 950, 1385, 1633, 1890, 2151, 3145
BstDSI CCRYGG 1 cut(s) 729
BstFNI CGCG 1 cut(s) 731
BstH2I RGCGCY 1 cut(s) 1638
BstHHI GCGC 2 cut(s) 63, 1637
BstMAI GTCTC 5 cut(s) 237, 1362, 1769, 1969, 2066
BstMWI GCNNNNNNNGC 4 cut(s) 256, 449, 692, 3153
BstNI CCWGG 5 cut(s) 67, 75, 180, 784, 1930
BstNSI RCATGY 8 cut(s) 576, 680, 1433, 1457, 1856, 1920, 2727, 3083
BstSCI CCNGG 5 cut(s) 65, 73, 178, 782, 1928
BstSFI CTRYAG 1 cut(s) 1067
BstSLI GKGCMC 1 cut(s) 445
BstSNI TACGTA 1 cut(s) 1079
BstUI CGCG 1 cut(s) 731
BstV1I GCAGC 8 cut(s) 29, 548, 579, 1925, 1976, 1979, 2034, 2165
BstV2I GAAGAC 1 cut(s) 3015
BstX2I RGATCY 3 cut(s) 1250, 1339, 1423
BstYI RGATCY 3 cut(s) 1250, 1339, 1423
Bsu15I ATCGAT 1 cut(s) 2416
BsuI GTATCC 3 cut(s) 2339, 2365, 3107
BsuRI GGCC 5 cut(s) 56, 1188, 1607, 1888, 2935
BsuTUI ATCGAT 1 cut(s) 2416
BtgI CCRYGG 1 cut(s) 729
BtrI CACGTC 1 cut(s) 1179
BtsI GCAGTG 3 cut(s) 1064, 1935, 2277
BveI ACCTGC 3 cut(s) 634, 799, 868
Cac8I GCNNGC 9 cut(s) 354, 574, 930, 950, 1385, 1633, 1890, 2151, 3145
CfoI GCGC 2 cut(s) 63, 1637
Cfr13I GGNCC 3 cut(s) 55, 1186, 1605
Cfr42I CCGCGG 1 cut(s) 732
ClaI ATCGAT 1 cut(s) 2416
CseI GACGC 1 cut(s) 513
DinI GGCGCC 1 cut(s) 1636
DraI TTTAAA 3 cut(s) 201, 990, 2926
DraIII CACNNNGTG 1 cut(s) 2824
DrdI GACNNNNNNGTC 2 cut(s) 1493, 3054
DseDI GACNNNNNNGTC 2 cut(s) 1493, 3054
EaeI YGGCCR 1 cut(s) 1886
Eam1104I CTCTTC 5 cut(s) 290, 924, 1278, 2387, 2960
EarI CTCTTC 5 cut(s) 290, 924, 1278, 2387, 2960
EciI GGCGGA 1 cut(s) 371
Ecl136II GAGCTC 2 cut(s) 12, 81
Eco105I TACGTA 1 cut(s) 1079
Eco130I CCWWGG 1 cut(s) 2941
Eco147I AGGCCT 1 cut(s) 2935
Eco24I GRGCYC 2 cut(s) 14, 83
Eco53kI GAGCTC 2 cut(s) 12, 81
Eco57I CTGAAG 2 cut(s) 2760, 3009
Eco72I CACGTG 1 cut(s) 23
Eco88I CYCGRG 2 cut(s) 339, 1807
EcoICRI GAGCTC 2 cut(s) 12, 81
EcoO109I RGGNCCY 3 cut(s) 55, 1186, 1605
EcoRII CCWGG 5 cut(s) 65, 73, 178, 782, 1928
EcoT14I CCWWGG 1 cut(s) 2941
EcoT22I ATGCAT 3 cut(s) 997, 1485, 1519
EcoT38I GRGCYC 2 cut(s) 14, 83
EgeI GGCGCC 1 cut(s) 1636
EheI GGCGCC 1 cut(s) 1636
ErhI CCWWGG 1 cut(s) 2941
FalI AAGNNNNNCTT 4 cut(s) 1653, 1685, 2906, 2938
FaqI GGGAC 3 cut(s) 1918, 2226, 2821
FblI GTMKAC 1 cut(s) 1536
Fnu4HI GCNGC 9 cut(s) 18, 537, 593, 1914, 1990, 1993, 2048, 2154, 2157
FriOI GRGCYC 2 cut(s) 14, 83
Fsp4HI GCNGC 9 cut(s) 18, 537, 593, 1914, 1990, 1993, 2048, 2154, 2157
FspBI CTAG 8 cut(s) 47, 489, 722, 1025, 2100, 2115, 2150, 2631
GlaI GCGC 2 cut(s) 62, 1636
GluI GCNGC 9 cut(s) 18, 537, 593, 1914, 1990, 1993, 2048, 2154, 2157
GsaI CCCAGC 1 cut(s) 442
GsuI CTGGAG 4 cut(s) 49, 132, 663, 1344
HaeII RGCGCY 1 cut(s) 1638
HaeIII GGCC 5 cut(s) 56, 1188, 1607, 1888, 2935
HapII CCGG 5 cut(s) 292, 614, 1421, 2905, 3059
HgaI GACGC 1 cut(s) 513
HhaI GCGC 2 cut(s) 63, 1637
Hin1I GRCGYC 1 cut(s) 1635
Hin6I GCGC 2 cut(s) 61, 1635
HinP1I GCGC 2 cut(s) 61, 1635
HincII GTYRAC 2 cut(s) 789, 2055
HindII GTYRAC 2 cut(s) 789, 2055
HindIII AAGCTT 5 cut(s) 377, 713, 946, 1574, 1667
HpaII CCGG 5 cut(s) 292, 614, 1421, 2905, 3059
HphI GGTGA 5 cut(s) 603, 615, 1038, 1306, 1336
Hpy166II GTNNAC 9 cut(s) 157, 789, 883, 1537, 1591, 2055, 2370, 2495, 2818
Hpy8I GTNNAC 9 cut(s) 157, 789, 883, 1537, 1591, 2055, 2370, 2495, 2818
Hpy99I CGWCG 1 cut(s) 529
HpyAV CCTTC 6 cut(s) 46, 153, 224, 803, 2822, 2911
HpyCH4III ACNGT 8 cut(s) 123, 392, 965, 1099, 2141, 2499, 2564, 3090
HpyCH4IV ACGT 6 cut(s) 22, 507, 620, 1078, 1178, 2189
HpyF10VI GCNNNNNNNGC 4 cut(s) 256, 449, 692, 3153
HpySE526I ACGT 6 cut(s) 22, 507, 620, 1078, 1178, 2189
Hsp92I GRCGYC 1 cut(s) 1635
HspAI GCGC 2 cut(s) 61, 1635
KasI GGCGCC 1 cut(s) 1634
Kpn2I TCCGGA 2 cut(s) 1420, 2904
KpnI GGTACC 1 cut(s) 1103
KspI CCGCGG 1 cut(s) 732
Lsp1109I GCAGC 8 cut(s) 29, 548, 579, 1925, 1976, 1979, 2034, 2165
MaeI CTAG 8 cut(s) 47, 489, 722, 1025, 2100, 2115, 2150, 2631
MaeII ACGT 6 cut(s) 22, 507, 620, 1078, 1178, 2189
MboII GAAGA 9 cut(s) 307, 911, 1122, 1265, 1385, 2169, 2404, 2947, 3015
MflI RGATCY 3 cut(s) 1250, 1339, 1423
MhlI GDGCHC 5 cut(s) 14, 83, 445, 470, 649
MlsI TGGCCA 1 cut(s) 1888
MluNI TGGCCA 1 cut(s) 1888
Mly113I GGCGCC 1 cut(s) 1635
MlyI GAGTC 8 cut(s) 331, 734, 1364, 1908, 2585, 2823, 2902, 3064
MmeI TCCRAC 3 cut(s) 142, 1422, 2323
Mox20I TGGCCA 1 cut(s) 1888
Mph1103I ATGCAT 3 cut(s) 997, 1485, 1519
MroI TCCGGA 2 cut(s) 1420, 2904
MroXI GAANNNNTTC 3 cut(s) 2301, 2458, 2470
MscI TGGCCA 1 cut(s) 1888
MslI CAYNNNNRTG 5 cut(s) 872, 927, 1319, 2444, 2879
Msp20I TGGCCA 1 cut(s) 1888
MspA1I CMGCKG 2 cut(s) 152, 731
MspI CCGG 5 cut(s) 292, 614, 1421, 2905, 3059
MspR9I CCNGG 5 cut(s) 67, 75, 180, 784, 1930
Mva1269I GAATGC 1 cut(s) 1162
MvaI CCWGG 5 cut(s) 67, 75, 180, 784, 1930
MvnI CGCG 1 cut(s) 731
MwoI GCNNNNNNNGC 4 cut(s) 256, 449, 692, 3153
NarI GGCGCC 1 cut(s) 1635
NheI GCTAGC 1 cut(s) 2149
NlaIV GGNNCC 5 cut(s) 1101, 1606, 1636, 1927, 3109
NmuCI GTSAC 4 cut(s) 621, 1044, 1288, 2699
NsiI ATGCAT 3 cut(s) 997, 1485, 1519
NspI RCATGY 8 cut(s) 576, 680, 1433, 1457, 1856, 1920, 2727, 3083
NspV TTCGAA 1 cut(s) 234
PaeI GCATGC 1 cut(s) 576
PaqCI CACCTGC 2 cut(s) 634, 868
PceI AGGCCT 1 cut(s) 2935
PciI ACATGT 1 cut(s) 1453
PctI GAATGC 1 cut(s) 1162
PdmI GAANNNNTTC 3 cut(s) 2301, 2458, 2470
PflFI GACNNNGTC 1 cut(s) 1354
PflMI CCANNNNNTGG 1 cut(s) 2824
PfoI TCCNGGA 1 cut(s) 65
PkrI GCNGC 9 cut(s) 19, 538, 594, 1915, 1991, 1994, 2049, 2155, 2158
PleI GAGTC 8 cut(s) 331, 733, 1363, 1907, 2585, 2822, 2902, 3063
PluTI GGCGCC 1 cut(s) 1638
PmaCI CACGTG 1 cut(s) 23
PmlI CACGTG 1 cut(s) 23
PpsI GAGTC 8 cut(s) 331, 733, 1363, 1907, 2585, 2822, 2902, 3063
Ppu21I YACGTR 2 cut(s) 23, 1079
PscI ACATGT 1 cut(s) 1453
Psp124BI GAGCTC 2 cut(s) 14, 83
Psp1406I AACGTT 1 cut(s) 2189
Psp6I CCWGG 5 cut(s) 65, 73, 178, 782, 1928
PspCI CACGTG 1 cut(s) 23
PspFI CCCAGC 1 cut(s) 438
PspGI CCWGG 5 cut(s) 65, 73, 178, 782, 1928
PspN4I GGNNCC 5 cut(s) 1101, 1606, 1636, 1927, 3109
PspPI GGNCC 3 cut(s) 55, 1186, 1605
PsrI GAACNNNNNNTAC 2 cut(s) 2719, 2751
PstI CTGCAG 1 cut(s) 1071
PsuI RGATCY 3 cut(s) 1250, 1339, 1423
PsyI GACNNNGTC 1 cut(s) 1354
PvuII CAGCTG 1 cut(s) 152
RseI CAYNNNNRTG 5 cut(s) 872, 927, 1319, 2444, 2879
SacI GAGCTC 2 cut(s) 14, 83
SacII CCGCGG 1 cut(s) 732
SatI GCNGC 9 cut(s) 18, 537, 593, 1914, 1990, 1993, 2048, 2154, 2157
Sau96I GGNCC 3 cut(s) 55, 1186, 1605
ScaI AGTACT 1 cut(s) 2918
SchI GAGTC 8 cut(s) 331, 734, 1364, 1908, 2585, 2823, 2902, 3064
ScrFI CCNGG 5 cut(s) 67, 75, 180, 784, 1930
SduI GDGCHC 5 cut(s) 14, 83, 445, 470, 649
SfcI CTRYAG 1 cut(s) 1067
SfoI GGCGCC 1 cut(s) 1636
Sfr303I CCGCGG 1 cut(s) 732
SfuI TTCGAA 1 cut(s) 234
SgrBI CCGCGG 1 cut(s) 732
SmiMI CAYNNNNRTG 5 cut(s) 872, 927, 1319, 2444, 2879
SmlI CTYRAG 2 cut(s) 1035, 1822
SmoI CTYRAG 2 cut(s) 1035, 1822
SnaBI TACGTA 1 cut(s) 1079
SphI GCATGC 1 cut(s) 576
SseBI AGGCCT 1 cut(s) 2935
SsiI CCGC 6 cut(s) 356, 729, 731, 2157, 2620, 2774
SspDI GGCGCC 1 cut(s) 1634
SspMI CTAG 8 cut(s) 47, 489, 722, 1025, 2100, 2115, 2150, 2631
SstI GAGCTC 2 cut(s) 14, 83
StuI AGGCCT 1 cut(s) 2935
StyD4I CCNGG 5 cut(s) 65, 73, 178, 782, 1928
StyI CCWWGG 1 cut(s) 2941
TaaI ACNGT 8 cut(s) 123, 392, 965, 1099, 2141, 2499, 2564, 3090
TaiI ACGT 6 cut(s) 25, 510, 623, 1081, 1181, 2192
TaqII GACCGA 1 cut(s) 1367
TatI WGTACW 7 cut(s) 315, 1120, 1238, 1590, 2510, 2916, 3073
TauI GCSGC 1 cut(s) 2159
TseFI GTSAC 4 cut(s) 621, 1044, 1288, 2699
TseI GCWGC 8 cut(s) 17, 536, 592, 1913, 1989, 1992, 2047, 2153
Tsp45I GTSAC 4 cut(s) 621, 1044, 1288, 2699
TspGWI ACGGA 3 cut(s) 336, 1032, 2826
Tth111I GACNNNGTC 1 cut(s) 1354
Van91I CCANNNNNTGG 1 cut(s) 2824
XapI RAATTY 4 cut(s) 840, 1836, 2081, 2408
XceI RCATGY 8 cut(s) 576, 680, 1433, 1457, 1856, 1920, 2727, 3083
XcmI CCANNNNNNNNNTGG 1 cut(s) 2563
XmiI GTMKAC 1 cut(s) 1536
XmnI GAANNNNTTC 3 cut(s) 2301, 2458, 2470
XspI CTAG 8 cut(s) 47, 489, 722, 1025, 2100, 2115, 2150, 2631
ZrmI AGTACT 1 cut(s) 2918
Zsp2I ATGCAT 3 cut(s) 997, 1485, 1519
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.