Rh4DG059900

snRNA processing

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr4D
OG0010119
Physical Location & Seq
Forward (+)
9099761 .. 9104298
4538 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh4DG059900.1

Sequence Viewer

Length: 2604 bp
ATGCAGGCTGAATTGCTTGTATTGTTTCTTAACAAAGAAAAAACTTTTCATCTTCGGGGAACAGCACTAAGATGCCTGCATTATATTTTCAGTAAAGGAATGTGTCATGTTCCTTTAAACGCATCTCTGGTGAACACATTAGTTAGCATGCTAGATGAACCCCAACTCCCATCACACATGCTATTTCAAGCACTGCAGACGTTGCGTAAGATAATTTTGCATATACATCCTAATCTGCCCTCTGATGTCTTTGAATCCTCTAAGCTGTTAAGCATTGCTACGAATGTATCTGCATCTCCAATTACATCAGAGAGCATGTTAGCCCTTTCTGTTTTGGTAAATATATCAAGAAAGTTAAAGGGAAGCACACAGATGGAGTCCTTTGTGCATTCAGAGTCTCATCTCCCATCTCGGGTGATTTTGCTTATCATAGATCAGATCACTTTGACAGTGAAGCCAGTTTTGGTTCTTTGTCAGATTGATTCTGTAGTGCTTCTGAAAGTTAATTTCCTTCTTGATCTTCTTATCATTCTAAATCGAGAATATCCAGATTTACATCTTCTAGTATTGGATCAAATATTTGGTTTAATCAAGTCCATCTCGATTGTGCATGACAATGTCATGGCTACAATAGACACAGATGCCTTTGTTCATGATAATGCAGATTTAAAAGAGAGCTCAGTTATCAGATCGAAGCTAGTATTTAGGATTTACAGATTTTTAATAACCTTTCTGGAGAATCTCAGTGAAGCTGAAGCCATCTCCACAAAAGTATTTGACAAGGTGAAGATTCTGGTCGAACATTTATGCCAGAGTAACTTGTTTGAGTGCTATGCATACACAATTTACTCTTTGCTGTTGCAACATCAGTTCATTTGGGGTCAGTTGGTGCATGAGAGCGAGGGAAGTTGCAATAGACTCTCGGATATATCTCTTCATAGTTACTCTGTTGGGCGTGAAACTCATGTCATTGAATTTGCTAAGAGGATGCTAACAGAAAAAAATAGTTGGCCTGCTTACAGGGTCGGGACATATGCAGCATGTCAGGGAGCTTGGCACACTGCGACTTTTATATTTGAGCAATTGGTGAAAAGAGTTCGCTCTGATCTGTGCTGTCGCTGGTTGAAATCACTAGTTCATTATGCTCATGGGGAGTGGAAATGGGAGCTGCTTCGATTGCCAAAACAAGGGTTAGAGACACGCAAATTCCCTCTTACACTTTCCATGGATGATTTAGGTGAAATTGGTCAAGATGCAGCTTGTAATATGAAGGGGCATATTTATAGTAAAGAGCTGGCTGCAGCTTACAACAGTCTCTGCTCTTCTTTGGAAACATTGAGAGTTGATGTCACAACAGGCCAAAGGTTTTATTTCCAGAGATGGTTTTTGTCCTTAAGAGTAAAGTTACTAGGAGCTGTGGTGGATATACTTGATATTTTGAGAAACATAATAAAAAATAGGCAGGGTCGGAAAAGTTCTTTGGTTGAATACTTTATTTTGTTGCAGAAGCTTACTCAGATATCTCTGCAGTTGAAGAGGGTGGCACATGAATTTGATCTAGTTAGAACATCTTTCATTGACATCGACAAGAAAAGTTCAAGTATCATTTCAGCGCTAGCATTAAGTTGCTCTGTGTTGGCCTTTTGTTCTGGTTTTGCTCTCTACATTCCAAGCCTAGCTAATCGCGTTGCTATTTGTGGTCAGGGAGTTGCAAACAATATAGACACAATACTGATACAAAATCTAGTTGGGCGGTTGTGGCACAGTAACCATGAATCCATTACAGATCTCTGTCTGCTTTGGGAGGTGGGTGGAAAGCCTTTTGATTGTTTTCACTTTCGATCAGGAATCCAAGCATGTGAAAATTGTTCCGAAGCAAGAGATATTCTTGGGGTCAGTAGTTATGCGGTTTCAGGGTTTTCTGGCTTGAAAAGCAAGTCTAACAGAGTGCAGAATGAGGAAGGTCTCTCCGAAGTAACCAAGGATGGCCTGCGACTTCTACTTGAAATTCTTATGAAATGGATGCAGATCCCTTTCCGGACTCCCAAGTACTTCTTCAACTTGAGGCCCTGCCTTGGGTCAGAACTCTTTGCTGTCAACGAAACTAGAAACCAAGATGGAATATCTGTTTCATTAGGCTTCCACTTGTCATTAAATCTCTGCCTTCAATTAAGAAATGCGCCACCAGACATCCCAGTGCGGTTTAACAAATTCTACTGCATGCTCTATTGTAAACTATCCTTTGTGGAGCCAAGATCAAGTGGAGAACACAAGGAGCAAGAGCTGGGTACTTATCAAGCTTGGGAAACCGATGACATGGTAGAAGTTAATGAAAAGCTGTTGAAGTATGCAACCGAATGCAGCACAAGAAAGAGTAATAAGCGTGGAAGGAGTAGTGATGATGAGGACTTTGTGCATTCATTCGTTTGTTTTGAACTGAATGACAGAGGACAAGGGTTCTCTAGTTGCTTGCTTGATGTTTCTGGTTTTCCAGTAGGTTATTATAGAATCAAATGGTATAGCTGTTGTTTTGATAATCAGGGAGAGTGTTGGACCCTCCCCCCTTTGAATCCTGGACCTGTATTTACTGTACAGAGTTTGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

867

Amino Acids

98.5

Weight (kDa)

7.5

Isoelectric Point (pI)

45.62

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
INTS7_C_plants PF22966 693 - 865 1.5e-72 Integrator complex subunit 7, C-terminal domain in plants
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccII CGCG 1 cut(s) 1686
AccIII TCCGGA 1 cut(s) 2037
AciI CCGC 3 cut(s) 1753, 1907, 2200
AclWI GGATC 2 cut(s) 579, 2023
AcsI RAATTY 5 cut(s) 974, 1205, 1550, 2007, 2210
AcuI CTGAAG 1 cut(s) 774
AfaI GTAC 3 cut(s) 2051, 2290, 2592
AfeI AGCGCT 1 cut(s) 1614
AfiI CCNNNNNNNGG 4 cut(s) 412, 1187, 2075, 2076
AflII CTTAAG 1 cut(s) 1393
AhlI ACTAGT 1 cut(s) 1132
AjnI CCWGG 1 cut(s) 2572
AjuI GAANNNNNNNTTGG 6 cut(s) 446, 478, 1463, 1495, 2039, 2071
AloI GAACNNNNNNTCC 2 cut(s) 150, 182
Alw21I GWGCWC 1 cut(s) 680
Alw26I GTCTC 4 cut(s) 402, 1190, 1319, 1970
AlwI GGATC 2 cut(s) 579, 2023
AlwNI CAGNNNCTG 1 cut(s) 1317
Ama87I CYCGRG 1 cut(s) 411
Aor13HI TCCGGA 1 cut(s) 2037
Aor51HI AGCGCT 1 cut(s) 1614
AoxI GGCC 5 cut(s) 1010, 1357, 1638, 1987, 2066
ApeKI GCWGC 6 cut(s) 1037, 1168, 1256, 1298, 1301, 2361
ApoI RAATTY 5 cut(s) 974, 1205, 1550, 2007, 2210
AspLEI GCGC 2 cut(s) 1615, 2182
AspS9I GGNCC 3 cut(s) 2067, 2553, 2576
AsuHPI GGTGA 5 cut(s) 142, 427, 796, 1099, 1250
AsuNHI GCTAGC 1 cut(s) 1615
AvaI CYCGRG 1 cut(s) 411
AvaII GGWCC 2 cut(s) 2553, 2576
BaeI ACNNNNGTAYC 2 cut(s) 270, 303
BanII GRGCYC 1 cut(s) 680
Bbv12I GWGCWC 1 cut(s) 680
BbvI GCAGC 6 cut(s) 1049, 1155, 1268, 1285, 1313, 2373
BccI CCATC 8 cut(s) 178, 367, 415, 605, 767, 1374, 1979, 2111
BciT130I CCWGG 1 cut(s) 2574
BcoDI GTCTC 4 cut(s) 402, 1190, 1319, 1970
BcuI ACTAGT 1 cut(s) 1132
BfmI CTRYAG 4 cut(s) 194, 486, 1299, 1526
BfoI RGCGCY 1 cut(s) 1616
BfrI CTTAAG 1 cut(s) 1393
BglII AGATCT 1 cut(s) 1786
BisI GCNGC 6 cut(s) 1038, 1169, 1257, 1299, 1302, 2362
BlsI GCNGC 6 cut(s) 1039, 1170, 1258, 1300, 1303, 2363
BmcAI AGTACT 1 cut(s) 2051
Bme1390I CCNGG 1 cut(s) 2574
Bme18I GGWCC 2 cut(s) 2553, 2576
BmeT110I CYCGRG 1 cut(s) 411
BmgT120I GGNCC 3 cut(s) 2067, 2553, 2576
BmiI GGNNCC 2 cut(s) 2250, 2555
BmrFI CCNGG 1 cut(s) 2574
BmrI ACTGGG 1 cut(s) 2189
BmsI GCATC 7 cut(s) 62, 131, 302, 631, 978, 1243, 2013
BmtI GCTAGC 1 cut(s) 1619
BmuI ACTGGG 1 cut(s) 2189
BpmI CTGGAG 1 cut(s) 755
BpuEI CTTGAG 1 cut(s) 2083
BsaBI GATNNNNATC 2 cut(s) 555, 2027
BsaI GGTCTC 1 cut(s) 1970
BsaJI CCNNGG 3 cut(s) 1224, 1980, 2074
BsaWI WCCGGW 1 cut(s) 2037
BsaXI ACNNNNNCTCC 4 cut(s) 150, 180, 1404, 1434
Bsc4I CCNNNNNNNGG 4 cut(s) 412, 1187, 2075, 2076
Bse1I ACTGG 3 cut(s) 458, 2195, 2492
Bse3DI GCAATG 1 cut(s) 273
Bse8I GATNNNNATC 2 cut(s) 555, 2027
BseAI TCCGGA 1 cut(s) 2037
BseBI CCWGG 1 cut(s) 2574
BseDI CCNNGG 3 cut(s) 1224, 1980, 2074
BseGI GGATG 6 cut(s) 226, 993, 1234, 1990, 2028, 2190
BseJI GATNNNNATC 2 cut(s) 555, 2027
BseLI CCNNNNNNNGG 4 cut(s) 412, 1187, 2075, 2076
BseMI GCAATG 1 cut(s) 273
BseMII CTCAG 3 cut(s) 693, 757, 1529
BseNI ACTGG 3 cut(s) 458, 2195, 2492
BseXI GCAGC 6 cut(s) 1049, 1155, 1268, 1285, 1313, 2373
BseYI CCCAGC 1 cut(s) 2284
BsgI GTGCAG 1 cut(s) 1970
Bsh1236I CGCG 1 cut(s) 1686
BshFI GGCC 5 cut(s) 1012, 1359, 1640, 1989, 2068
BsiHKAI GWGCWC 1 cut(s) 680
BsiHKCI CYCGRG 1 cut(s) 411
BsiSI CCGG 1 cut(s) 2038
BslFI GGGAC 1 cut(s) 1042
BslI CCNNNNNNNGG 4 cut(s) 412, 1187, 2075, 2076
BsmAI GTCTC 4 cut(s) 402, 1190, 1319, 1970
BsmFI GGGAC 1 cut(s) 1042
BsmI GAATGC 3 cut(s) 388, 2363, 2416
BsnI GGCC 5 cut(s) 1012, 1359, 1640, 1989, 2068
Bso31I GGTCTC 1 cut(s) 1970
BsoBI CYCGRG 1 cut(s) 411
Bsp1286I GDGCHC 1 cut(s) 680
Bsp13I TCCGGA 1 cut(s) 2037
Bsp1407I TGTACA 1 cut(s) 2590
Bsp19I CCATGG 1 cut(s) 1224
BspACI CCGC 3 cut(s) 1753, 1907, 2200
BspANI GGCC 5 cut(s) 1012, 1359, 1640, 1989, 2068
BspCNI CTCAG 3 cut(s) 692, 756, 1528
BspEI TCCGGA 1 cut(s) 2037
BspFNI CGCG 1 cut(s) 1686
BspHI TCATGA 1 cut(s) 652
BspLI GGNNCC 2 cut(s) 2250, 2555
BspMAI CTGCAG 3 cut(s) 198, 1303, 1530
BspOI GCTAGC 1 cut(s) 1619
BspPI GGATC 2 cut(s) 579, 2023
BspQI GCTCTTC 1 cut(s) 1327
BspTI CTTAAG 1 cut(s) 1393
BspTNI GGTCTC 1 cut(s) 1970
BsrDI GCAATG 1 cut(s) 273
BsrGI TGTACA 1 cut(s) 2590
BsrI ACTGG 3 cut(s) 458, 2195, 2492
BssECI CCNNGG 3 cut(s) 1224, 1980, 2074
BssT1I CCWWGG 3 cut(s) 1224, 1980, 2074
Bst2UI CCWGG 1 cut(s) 2574
Bst4CI ACNGT 4 cut(s) 451, 1313, 1766, 2590
Bst6I CTCTTC 3 cut(s) 939, 1327, 1529
BstAFI CTTAAG 1 cut(s) 1393
BstAPI GCANNNNNTGC 1 cut(s) 202
BstAUI TGTACA 1 cut(s) 2590
BstC8I GCNNGC 9 cut(s) 6, 77, 149, 1014, 1296, 1617, 1991, 2222, 2471
BstDEI CTNAG 6 cut(s) 68, 261, 679, 743, 981, 1515
BstDSI CCRYGG 1 cut(s) 1224
BstF5I GGATG 6 cut(s) 226, 993, 1234, 1990, 2028, 2190
BstFNI CGCG 1 cut(s) 1686
BstH2I RGCGCY 1 cut(s) 1616
BstHHI GCGC 2 cut(s) 1615, 2182
BstMAI GTCTC 4 cut(s) 402, 1190, 1319, 1970
BstMWI GCNNNNNNNGC 4 cut(s) 202, 1177, 1759, 1932
BstNI CCWGG 1 cut(s) 2574
BstNSI RCATGY 6 cut(s) 151, 181, 319, 1044, 1860, 2224
BstSCI CCNGG 1 cut(s) 2572
BstSFI CTRYAG 4 cut(s) 194, 486, 1299, 1526
BstUI CGCG 1 cut(s) 1686
BstV1I GCAGC 6 cut(s) 1049, 1155, 1268, 1285, 1313, 2373
BstX2I RGATCY 2 cut(s) 1786, 2028
BstYI RGATCY 2 cut(s) 1786, 2028
BsuRI GGCC 5 cut(s) 1012, 1359, 1640, 1989, 2068
BtgI CCRYGG 1 cut(s) 1224
BtsCI GGATG 6 cut(s) 226, 993, 1234, 1990, 2028, 2190
BtsI GCAGTG 2 cut(s) 191, 1059
BtsIMutI CAGTG 5 cut(s) 191, 456, 751, 1059, 2202
Cac8I GCNNGC 9 cut(s) 6, 77, 149, 1014, 1296, 1617, 1991, 2222, 2471
CaiI CAGNNNCTG 1 cut(s) 1317
CciI TCATGA 1 cut(s) 652
CfoI GCGC 2 cut(s) 1615, 2182
Cfr13I GGNCC 3 cut(s) 2067, 2553, 2576
Csp6I GTAC 3 cut(s) 2050, 2289, 2591
CviQI GTAC 3 cut(s) 2050, 2289, 2591
DdeI CTNAG 6 cut(s) 68, 261, 679, 743, 981, 1515
DraI TTTAAA 2 cut(s) 117, 669
Eam1104I CTCTTC 3 cut(s) 939, 1327, 1529
EarI CTCTTC 3 cut(s) 939, 1327, 1529
Ecl136II GAGCTC 1 cut(s) 678
Eco130I CCWWGG 3 cut(s) 1224, 1980, 2074
Eco24I GRGCYC 1 cut(s) 680
Eco31I GGTCTC 1 cut(s) 1970
Eco32I GATATC 1 cut(s) 1521
Eco47I GGWCC 2 cut(s) 2553, 2576
Eco47III AGCGCT 1 cut(s) 1614
Eco53kI GAGCTC 1 cut(s) 678
Eco57I CTGAAG 1 cut(s) 774
Eco88I CYCGRG 1 cut(s) 411
EcoICRI GAGCTC 1 cut(s) 678
EcoO109I RGGNCCY 1 cut(s) 2067
EcoRII CCWGG 1 cut(s) 2572
EcoRV GATATC 1 cut(s) 1521
EcoT14I CCWWGG 3 cut(s) 1224, 1980, 2074
EcoT22I ATGCAT 1 cut(s) 838
EcoT38I GRGCYC 1 cut(s) 680
ErhI CCWWGG 3 cut(s) 1224, 1980, 2074
FalI AAGNNNNNCTT 2 cut(s) 2039, 2071
FaqI GGGAC 1 cut(s) 1042
FauNDI CATATG 1 cut(s) 1033
Fnu4HI GCNGC 6 cut(s) 1038, 1169, 1257, 1299, 1302, 2362
FokI GGATG 6 cut(s) 213, 1000, 1241, 1997, 2035, 2177
FriOI GRGCYC 1 cut(s) 680
Fsp4HI GCNGC 6 cut(s) 1038, 1169, 1257, 1299, 1302, 2362
GlaI GCGC 2 cut(s) 1614, 2181
GluI GCNGC 6 cut(s) 1038, 1169, 1257, 1299, 1302, 2362
GsaI CCCAGC 1 cut(s) 2288
GsuI CTGGAG 1 cut(s) 755
HaeII RGCGCY 1 cut(s) 1616
HaeIII GGCC 5 cut(s) 1012, 1359, 1640, 1989, 2068
HapII CCGG 1 cut(s) 2038
HhaI GCGC 2 cut(s) 1615, 2182
Hin6I GCGC 2 cut(s) 1613, 2180
HinP1I GCGC 2 cut(s) 1613, 2180
HincII GTYRAC 1 cut(s) 2098
HindII GTYRAC 1 cut(s) 2098
HindIII AAGCTT 2 cut(s) 1508, 2298
HpaII CCGG 1 cut(s) 2038
HphI GGTGA 5 cut(s) 142, 427, 796, 1099, 1250
Hpy166II GTNNAC 3 cut(s) 133, 2098, 2234
Hpy8I GTNNAC 3 cut(s) 133, 2098, 2234
HpyAV CCTTC 5 cut(s) 521, 1264, 1955, 2174, 2382
HpyCH4III ACNGT 4 cut(s) 451, 1313, 1766, 2590
HpyCH4IV ACGT 1 cut(s) 200
HpyF10VI GCNNNNNNNGC 4 cut(s) 202, 1177, 1759, 1932
HpyF3I CTNAG 6 cut(s) 68, 261, 679, 743, 981, 1515
HpySE526I ACGT 1 cut(s) 200
HspAI GCGC 2 cut(s) 1613, 2180
Kpn2I TCCGGA 1 cut(s) 2037
LguI GCTCTTC 1 cut(s) 1327
LmnI GCTCC 5 cut(s) 1049, 1165, 1412, 2248, 2275
Lsp1109I GCAGC 6 cut(s) 1049, 1155, 1268, 1285, 1313, 2373
LweI GCATC 7 cut(s) 62, 131, 302, 631, 978, 1243, 2013
MaeII ACGT 1 cut(s) 200
MaeIII GTNAC 6 cut(s) 815, 941, 1348, 1404, 1766, 1975
MboII GAAGA 8 cut(s) 44, 512, 551, 799, 926, 1314, 1546, 2047
MfeI CAATTG 1 cut(s) 1082
MflI RGATCY 2 cut(s) 1786, 2028
MhlI GDGCHC 1 cut(s) 680
MlyI GAGTC 4 cut(s) 386, 404, 912, 2035
MmeI TCCRAC 2 cut(s) 1448, 2531
Mph1103I ATGCAT 1 cut(s) 838
MroI TCCGGA 1 cut(s) 2037
MslI CAYNNNNRTG 5 cut(s) 70, 371, 615, 657, 2195
MspCI CTTAAG 1 cut(s) 1393
MspI CCGG 1 cut(s) 2038
MspR9I CCNGG 1 cut(s) 2574
MunI CAATTG 1 cut(s) 1082
Mva1269I GAATGC 3 cut(s) 388, 2363, 2416
MvaI CCWGG 1 cut(s) 2574
MvnI CGCG 1 cut(s) 1686
MwoI GCNNNNNNNGC 4 cut(s) 202, 1177, 1759, 1932
NcoI CCATGG 1 cut(s) 1224
NdeI CATATG 1 cut(s) 1033
NheI GCTAGC 1 cut(s) 1615
NlaIV GGNNCC 2 cut(s) 2250, 2555
NmuCI GTSAC 1 cut(s) 1348
NsiI ATGCAT 1 cut(s) 838
NspI RCATGY 6 cut(s) 151, 181, 319, 1044, 1860, 2224
PaeI GCATGC 2 cut(s) 151, 2224
PagI TCATGA 1 cut(s) 652
PciSI GCTCTTC 1 cut(s) 1327
PctI GAATGC 3 cut(s) 388, 2363, 2416
PfeI GAWTC 8 cut(s) 254, 482, 739, 790, 1775, 1848, 2508, 2569
PflFI GACNNNGTC 1 cut(s) 617
PfoI TCCNGGA 1 cut(s) 2572
PkrI GCNGC 6 cut(s) 1039, 1170, 1258, 1300, 1303, 2363
PleI GAGTC 4 cut(s) 385, 403, 912, 2035
PpsI GAGTC 4 cut(s) 385, 403, 912, 2035
Psp124BI GAGCTC 1 cut(s) 680
Psp6I CCWGG 1 cut(s) 2572
PspFI CCCAGC 1 cut(s) 2284
PspGI CCWGG 1 cut(s) 2572
PspN4I GGNNCC 2 cut(s) 2250, 2555
PspPI GGNCC 3 cut(s) 2067, 2553, 2576
PstI CTGCAG 3 cut(s) 198, 1303, 1530
PstNI CAGNNNCTG 1 cut(s) 1317
PsuI RGATCY 2 cut(s) 1786, 2028
PsyI GACNNNGTC 1 cut(s) 617
RsaI GTAC 3 cut(s) 2051, 2290, 2592
RsaNI GTAC 3 cut(s) 2050, 2289, 2591
RseI CAYNNNNRTG 5 cut(s) 70, 371, 615, 657, 2195
SacI GAGCTC 1 cut(s) 680
SapI GCTCTTC 1 cut(s) 1327
SatI GCNGC 6 cut(s) 1038, 1169, 1257, 1299, 1302, 2362
Sau96I GGNCC 3 cut(s) 2067, 2553, 2576
ScaI AGTACT 1 cut(s) 2051
SchI GAGTC 4 cut(s) 386, 404, 912, 2035
ScrFI CCNGG 1 cut(s) 2574
SduI GDGCHC 1 cut(s) 680
SfaNI GCATC 7 cut(s) 62, 131, 302, 631, 978, 1243, 2013
SfcI CTRYAG 4 cut(s) 194, 486, 1299, 1526
SinI GGWCC 2 cut(s) 2553, 2576
SmiMI CAYNNNNRTG 5 cut(s) 70, 371, 615, 657, 2195
SmlI CTYRAG 2 cut(s) 1393, 2062
SmoI CTYRAG 2 cut(s) 1393, 2062
SpeI ACTAGT 1 cut(s) 1132
SphI GCATGC 2 cut(s) 151, 2224
SsiI CCGC 3 cut(s) 1753, 1907, 2200
SspI AATATT 1 cut(s) 579
SstI GAGCTC 1 cut(s) 680
StyD4I CCNGG 1 cut(s) 2572
StyI CCWWGG 3 cut(s) 1224, 1980, 2074
TaaI ACNGT 4 cut(s) 451, 1313, 1766, 2590
TaiI ACGT 1 cut(s) 203
TaqI TCGA 7 cut(s) 538, 602, 692, 798, 1174, 1584, 1840
TatI WGTACW 2 cut(s) 2049, 2590
TfiI GAWTC 8 cut(s) 254, 482, 739, 790, 1775, 1848, 2508, 2569
TscAI CASTG 5 cut(s) 198, 456, 751, 1066, 2202
TseFI GTSAC 1 cut(s) 1348
TseI GCWGC 6 cut(s) 1037, 1168, 1256, 1298, 1301, 2361
Tsp45I GTSAC 1 cut(s) 1348
TspRI CASTG 5 cut(s) 198, 456, 751, 1066, 2202
Tth111I GACNNNGTC 1 cut(s) 617
Vha464I CTTAAG 1 cut(s) 1393
VpaK11BI GGWCC 2 cut(s) 2553, 2576
XapI RAATTY 5 cut(s) 974, 1205, 1550, 2007, 2210
XceI RCATGY 6 cut(s) 151, 181, 319, 1044, 1860, 2224
ZrmI AGTACT 1 cut(s) 2051
Zsp2I ATGCAT 1 cut(s) 838
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.