MD14G1117800.v1.1

Protein of unknown function (DUF1191)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr14
OG0013990
Physical Location & Seq
Forward (+)
19267471 .. 19268367
897 bp
Loading structure...
UTR
Exon/CDS
Intron
MD14G1117800.v1.1.491

Sequence Viewer

Length: 897 bp
ATGAGCACAAATTCAATGTGCTTTTGCTTCTTCACATTTGTACTTTTTTCATGTGTGTGCTGCTTGAGCAACTCTACTACTGAGTCTTTGGATGTGTTTAGTCGAGATTTGGCCTTCAAGGCGCTTGCAGAGCGCCGGGCTCGCACCGGCTTTCTGTACAAGGCTGTCCTCCCCGCTAACCTATCCGGCATGGAAGTCTCCGTCGTGAGGCTCCTAACCCGGCGGTTGTGGAATAGAGGTGCTACTAATTTCAGCTGCTTCAAAATTCCATCAAGGACCATCCCAATGCCTCATGTGAAGAGACTGGCTTTTGTGCATCAAAATTTGGGCAACTGGTCATCTTACTACTACCCTCTTCCAGGTTACTCACTAGTCTCTTCTGTTGTTGGTTTTACGGTTTATGATGCTTCGAATACCAGCTCGAAAAGCACCACAAAGCTCGGCCTCAACACGATGGGGAAACCTATACTGGTTCAGTTTCCGAATCTCACATTGGACAGAAGAACAAGCGCAAGGGCAAAATGTGCATCATTTTCTGCCAAAGGGACGGTTTCCCTCAGCGAAATGAGATCACCTGGTGTGTGTTACACCACAGAGCAAGGTCATTTTTTGATTGTTGTTCCGTCCAAGAGAAAAGGAAGCATGAAGCATTTGTGGGTTATAGGGTTCGTGCTTGGATTTCCCCTGATAGTTGTGGCGGGTTATGTTGGGATTGTATTGTTGAAGCGTCTAAGGACAAAGAAGATTGAAACAATGGAGAAACAAGCTGAAGAGGATTTGGTTCTCGAAAACAGATGGGTTTACGGTAGTAAAATGCCTTCTGCTGCATTTACAAGAACAATGCCGGCTCTTGAGAATGGTTATCCATGCCGCGGTTCATCGGATCACTTCATCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF1191

Protein Analysis

299

Amino Acids

33.25

Weight (kDa)

9.84

Isoelectric Point (pI)

42.84

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF1191 PF06697 26 - 208 2.2e-65 Protein of unknown function (DUF1191)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0013990)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G23720
fragaria_vesca FvH4_5g03780
malus_domestica MD06G1098600.v1.1 MD14G1117800.v1.1
prunus_persica Prupe.5G112200_v2.0.a1
rosa_chinensis RchiOBHm_Chr7g0195831
rosa_laevigata RLG00000004084 RLG00000004085
rosa_multiflora Rmu_co8456501.1_g000001 Rmu_sc0002445.1_g000012
rosa_roxburghii Rroxscaffold_3G00260060
rosa_rugosa Rorug07G0026500
rosa_samantha Rh7AG154500 Rh7BG156300 Rh7CG160000 Rh7DG155400
rosa_wichuraiana Rw7G013200

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccII CGCG 1 cut(s) 873
AciI CCGC 5 cut(s) 174, 223, 698, 871, 873
AclWI GGATC 1 cut(s) 891
AcsI RAATTY 3 cut(s) 10, 264, 322
AcuI CTGAAG 1 cut(s) 789
AdeI CACNNNGTG 1 cut(s) 578
AfaI GTAC 2 cut(s) 42, 158
AfiI CCNNNNNNNGG 3 cut(s) 207, 359, 872
AgsI TTSAA 5 cut(s) 15, 118, 262, 724, 749
AhlI ACTAGT 1 cut(s) 370
AjnI CCWGG 2 cut(s) 358, 574
AjuI GAANNNNNNNTTGG 2 cut(s) 476, 508
AluBI AGCT 4 cut(s) 255, 420, 439, 767
AluI AGCT 4 cut(s) 255, 420, 439, 767
Alw21I GWGCWC 1 cut(s) 8
Alw26I GTCTC 3 cut(s) 202, 295, 379
AlwI GGATC 1 cut(s) 891
AoxI GGCC 2 cut(s) 111, 442
ApeKI GCWGC 3 cut(s) 60, 255, 824
ApoI RAATTY 3 cut(s) 10, 264, 322
AspLEI GCGC 3 cut(s) 124, 135, 512
AspS9I GGNCC 1 cut(s) 276
AsuC2I CCSGG 2 cut(s) 137, 220
AsuHPI GGTGA 1 cut(s) 564
AsuII TTCGAA 1 cut(s) 410
AvaII GGWCC 1 cut(s) 276
BanII GRGCYC 1 cut(s) 142
BarI GAAGNNNNNNTAC 2 cut(s) 802, 834
Bbv12I GWGCWC 1 cut(s) 8
BbvCI CCTCAGC 1 cut(s) 557
BbvI GCAGC 3 cut(s) 47, 242, 811
BccI CCATC 4 cut(s) 277, 287, 448, 789
BciT130I CCWGG 2 cut(s) 360, 576
BcnI CCSGG 2 cut(s) 137, 220
BcoDI GTCTC 3 cut(s) 202, 295, 379
BcuI ACTAGT 1 cut(s) 370
BfaI CTAG 1 cut(s) 371
BfoI RGCGCY 2 cut(s) 125, 136
BglI GCCNNNNNGGC 1 cut(s) 119
BisI GCNGC 4 cut(s) 61, 256, 825, 871
BlsI GCNGC 4 cut(s) 62, 257, 826, 872
Bme1390I CCNGG 4 cut(s) 137, 220, 360, 576
Bme18I GGWCC 1 cut(s) 276
BmgT120I GGNCC 1 cut(s) 276
BmiI GGNNCC 1 cut(s) 212
BmrFI CCNGG 4 cut(s) 137, 220, 360, 576
BmsI GCATC 3 cut(s) 325, 394, 536
Bpu10I CCTNAGC 1 cut(s) 557
Bpu14I TTCGAA 1 cut(s) 410
BpuEI CTTGAG 2 cut(s) 85, 872
BpuMI CCSGG 2 cut(s) 137, 220
BsaJI CCNNGG 1 cut(s) 871
Bsc4I CCNNNNNNNGG 3 cut(s) 207, 359, 872
Bse118I RCCGGY 2 cut(s) 146, 844
Bse1I ACTGG 3 cut(s) 309, 338, 474
BseBI CCWGG 2 cut(s) 360, 576
BseDI CCNNGG 1 cut(s) 871
BseGI GGATG 2 cut(s) 97, 279
BseLI CCNNNNNNNGG 3 cut(s) 207, 359, 872
BseMII CTCAG 2 cut(s) 72, 571
BseNI ACTGG 3 cut(s) 309, 338, 474
BseXI GCAGC 3 cut(s) 47, 242, 811
Bsh1236I CGCG 1 cut(s) 873
BshFI GGCC 2 cut(s) 113, 444
BsiHKAI GWGCWC 1 cut(s) 8
BsiSI CCGG 5 cut(s) 136, 147, 186, 220, 845
BslFI GGGAC 1 cut(s) 559
BslI CCNNNNNNNGG 3 cut(s) 207, 359, 872
BsmAI GTCTC 3 cut(s) 202, 295, 379
BsmFI GGGAC 1 cut(s) 559
BsnI GGCC 2 cut(s) 113, 444
Bsp119I TTCGAA 1 cut(s) 410
Bsp1286I GDGCHC 2 cut(s) 8, 142
Bsp1407I TGTACA 1 cut(s) 156
Bsp143I GATC 2 cut(s) 569, 883
BspACI CCGC 5 cut(s) 174, 223, 698, 871, 873
BspANI GGCC 2 cut(s) 113, 444
BspCNI CTCAG 2 cut(s) 73, 570
BspFNI CGCG 1 cut(s) 873
BspLI GGNNCC 1 cut(s) 212
BspPI GGATC 1 cut(s) 891
BspT104I TTCGAA 1 cut(s) 410
BsrFI RCCGGY 2 cut(s) 146, 844
BsrGI TGTACA 1 cut(s) 156
BsrI ACTGG 3 cut(s) 309, 338, 474
BssAI RCCGGY 2 cut(s) 146, 844
BssECI CCNNGG 1 cut(s) 871
BssMI GATC 2 cut(s) 569, 883
Bst2UI CCWGG 2 cut(s) 360, 576
Bst4CI ACNGT 3 cut(s) 397, 550, 806
Bst6I CTCTTC 4 cut(s) 293, 360, 382, 765
BstAPI GCANNNNNTGC 1 cut(s) 524
BstAUI TGTACA 1 cut(s) 156
BstBI TTCGAA 1 cut(s) 410
BstC8I GCNNGC 3 cut(s) 126, 142, 846
BstDEI CTNAG 3 cut(s) 81, 557, 731
BstDSI CCRYGG 1 cut(s) 871
BstENI CCTNNNNNAGG 1 cut(s) 357
BstF5I GGATG 2 cut(s) 97, 279
BstFNI CGCG 1 cut(s) 873
BstH2I RGCGCY 2 cut(s) 125, 136
BstHHI GCGC 3 cut(s) 124, 135, 512
BstKTI GATC 2 cut(s) 572, 886
BstMAI GTCTC 3 cut(s) 202, 295, 379
BstMBI GATC 2 cut(s) 569, 883
BstMWI GCNNNNNNNGC 6 cut(s) 66, 119, 130, 141, 426, 524
BstNI CCWGG 2 cut(s) 360, 576
BstSCI CCNGG 4 cut(s) 135, 218, 358, 574
BstUI CGCG 1 cut(s) 873
BstV1I GCAGC 3 cut(s) 47, 242, 811
BsuRI GGCC 2 cut(s) 113, 444
BtgI CCRYGG 1 cut(s) 871
BtsCI GGATG 2 cut(s) 97, 279
Cac8I GCNNGC 3 cut(s) 126, 142, 846
CfoI GCGC 3 cut(s) 124, 135, 512
Cfr10I RCCGGY 2 cut(s) 146, 844
Cfr13I GGNCC 1 cut(s) 276
Cfr42I CCGCGG 1 cut(s) 874
CseI GACGC 1 cut(s) 716
CsiI ACCWGGT 1 cut(s) 574
Csp6I GTAC 2 cut(s) 41, 157
CviAII CATG 5 cut(s) 51, 190, 293, 643, 867
CviQI GTAC 2 cut(s) 41, 157
DdeI CTNAG 3 cut(s) 81, 557, 731
DpnI GATC 2 cut(s) 571, 885
DpnII GATC 2 cut(s) 569, 883
DraIII CACNNNGTG 1 cut(s) 578
Eam1104I CTCTTC 4 cut(s) 293, 360, 382, 765
EarI CTCTTC 4 cut(s) 293, 360, 382, 765
Eco24I GRGCYC 1 cut(s) 142
Eco47I GGWCC 1 cut(s) 276
Eco57I CTGAAG 1 cut(s) 789
EcoNI CCTNNNNNAGG 1 cut(s) 357
EcoRII CCWGG 2 cut(s) 358, 574
EcoT38I GRGCYC 1 cut(s) 142
FaeI CATG 5 cut(s) 54, 193, 296, 646, 870
FaiI YATR 9 cut(s) 52, 191, 294, 402, 467, 644, 662, 705, 868
FaqI GGGAC 1 cut(s) 559
FatI CATG 5 cut(s) 50, 189, 292, 642, 866
FauI CCCGC 2 cut(s) 181, 691
Fnu4HI GCNGC 4 cut(s) 61, 256, 825, 871
FokI GGATG 2 cut(s) 104, 266
FriOI GRGCYC 1 cut(s) 142
Fsp4HI GCNGC 4 cut(s) 61, 256, 825, 871
FspBI CTAG 1 cut(s) 371
GlaI GCGC 3 cut(s) 123, 134, 511
GluI GCNGC 4 cut(s) 61, 256, 825, 871
HaeII RGCGCY 2 cut(s) 125, 136
HaeIII GGCC 2 cut(s) 113, 444
HapII CCGG 5 cut(s) 136, 147, 186, 220, 845
HgaI GACGC 1 cut(s) 716
HhaI GCGC 3 cut(s) 124, 135, 512
Hin1II CATG 5 cut(s) 54, 193, 296, 646, 870
Hin6I GCGC 3 cut(s) 122, 133, 510
HinP1I GCGC 3 cut(s) 122, 133, 510
HinfI GANTC 2 cut(s) 83, 484
HpaII CCGG 5 cut(s) 136, 147, 186, 220, 845
HphI GGTGA 1 cut(s) 564
Hpy166II GTNNAC 1 cut(s) 802
Hpy188I TCNGA 3 cut(s) 483, 883, 896
Hpy188III TCNNGA 4 cut(s) 104, 205, 785, 851
Hpy8I GTNNAC 1 cut(s) 802
Hpy99I CGWCG 1 cut(s) 206
HpyAV CCTTC 2 cut(s) 124, 828
HpyCH4III ACNGT 3 cut(s) 397, 550, 806
HpyCH4V TGCA 4 cut(s) 128, 316, 527, 827
HpyF10VI GCNNNNNNNGC 6 cut(s) 66, 119, 130, 141, 426, 524
HpyF3I CTNAG 3 cut(s) 81, 557, 731
Hsp92II CATG 5 cut(s) 54, 193, 296, 646, 870
HspAI GCGC 3 cut(s) 122, 133, 510
KroI GCCGGC 1 cut(s) 844
KroNI GCCGGC 1 cut(s) 846
KspI CCGCGG 1 cut(s) 874
Kzo9I GATC 2 cut(s) 569, 883
LmnI GCTCC 1 cut(s) 216
Lsp1109I GCAGC 3 cut(s) 47, 242, 811
LweI GCATC 3 cut(s) 325, 394, 536
MabI ACCWGGT 1 cut(s) 574
MaeI CTAG 1 cut(s) 371
MaeIII GTNAC 2 cut(s) 362, 584
MalI GATC 2 cut(s) 571, 885
MboI GATC 2 cut(s) 569, 883
MboII GAAGA 7 cut(s) 22, 310, 347, 369, 513, 754, 782
MhlI GDGCHC 2 cut(s) 8, 142
MluCI AATT 4 cut(s) 10, 247, 264, 322
MlyI GAGTC 1 cut(s) 92
MnlI CCTC 8 cut(s) 179, 201, 230, 300, 363, 455, 566, 766
MroNI GCCGGC 1 cut(s) 844
MslI CAYNNNNRTG 2 cut(s) 55, 284
MspA1I CMGCKG 2 cut(s) 255, 873
MspI CCGG 5 cut(s) 136, 147, 186, 220, 845
MspR9I CCNGG 4 cut(s) 137, 220, 360, 576
MvaI CCWGG 2 cut(s) 360, 576
MvnI CGCG 1 cut(s) 873
MwoI GCNNNNNNNGC 6 cut(s) 66, 119, 130, 141, 426, 524
NaeI GCCGGC 1 cut(s) 846
NciI CCSGG 2 cut(s) 137, 220
NdeII GATC 2 cut(s) 569, 883
NgoMIV GCCGGC 1 cut(s) 844
NlaIII CATG 5 cut(s) 54, 193, 296, 646, 870
NlaIV GGNNCC 1 cut(s) 212
NmeAIII GCCGAG 1 cut(s) 420
NspV TTCGAA 1 cut(s) 410
PdiI GCCGGC 1 cut(s) 846
PfeI GAWTC 1 cut(s) 484
PkrI GCNGC 4 cut(s) 62, 257, 826, 872
PleI GAGTC 1 cut(s) 91
PpsI GAGTC 1 cut(s) 91
Psp6I CCWGG 2 cut(s) 358, 574
PspGI CCWGG 2 cut(s) 358, 574
PspN4I GGNNCC 1 cut(s) 212
PspPI GGNCC 1 cut(s) 276
PvuII CAGCTG 1 cut(s) 255
RsaI GTAC 2 cut(s) 42, 158
RsaNI GTAC 2 cut(s) 41, 157
RseI CAYNNNNRTG 2 cut(s) 55, 284
SacII CCGCGG 1 cut(s) 874
SatI GCNGC 4 cut(s) 61, 256, 825, 871
Sau3AI GATC 2 cut(s) 569, 883
Sau96I GGNCC 1 cut(s) 276
SchI GAGTC 1 cut(s) 92
ScrFI CCNGG 4 cut(s) 137, 220, 360, 576
SduI GDGCHC 2 cut(s) 8, 142
SexAI ACCWGGT 1 cut(s) 574
SfaNI GCATC 3 cut(s) 325, 394, 536
Sfr303I CCGCGG 1 cut(s) 874
SfuI TTCGAA 1 cut(s) 410
SgrBI CCGCGG 1 cut(s) 874
SinI GGWCC 1 cut(s) 276
SmiMI CAYNNNNRTG 2 cut(s) 55, 284
SmlI CTYRAG 2 cut(s) 64, 851
SmoI CTYRAG 2 cut(s) 64, 851
SpeI ACTAGT 1 cut(s) 370
Sse9I AATT 4 cut(s) 10, 247, 264, 322
SsiI CCGC 5 cut(s) 174, 223, 698, 871, 873
SspMI CTAG 1 cut(s) 371
StyD4I CCNGG 4 cut(s) 135, 218, 358, 574
TaaI ACNGT 3 cut(s) 397, 550, 806
TaqI TCGA 4 cut(s) 103, 410, 422, 786
TasI AATT 4 cut(s) 10, 247, 264, 322
TatI WGTACW 2 cut(s) 40, 156
TauI GCSGC 1 cut(s) 873
TfiI GAWTC 1 cut(s) 484
TseI GCWGC 3 cut(s) 60, 255, 824
TspDTI ATGAA 4 cut(s) 39, 659, 867, 880
TspGWI ACGGA 2 cut(s) 190, 612
VpaK11BI GGWCC 1 cut(s) 276
XagI CCTNNNNNAGG 1 cut(s) 357
XapI RAATTY 3 cut(s) 10, 264, 322
XspI CTAG 1 cut(s) 371
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.