MD15G1014900.v1.1

Protein RCC2 homolog

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr15
OG0012326
Physical Location & Seq
Reverse (-)
877104 .. 881819
4716 bp
Loading structure...
UTR
Exon/CDS
Intron
MD15G1014900.v1.1.491

Sequence Viewer

Length: 1617 bp
ATGTCTGCGGTCCAGGCGGATAAGAAGGTGGAGGTGGAGAAATCGGGAGAGCTTTTGTTCTGCGGAGGTACGTCTTGGGACGCCATTGGTCGGCGCAAAGGCGCCATTGAAGGTAATTTGATCTCCCCCACGCGCCTCCGCCCTCTCGTCGACATCGACATCCGATTCGTCGCCTCGGGTTGCTCTTCGTGTCATTGTGTGGCATTGGATGTGGAAGGGCGGTGTTATACCTGGGGACGCAATGAGAAGGGGCAGCTGGGCCATGGTGATACAATTCAGCGCGATAGGCCAACTGTAGTGTCGGAACTTTCGAAGTACAGAGTTGTTAGAGCTTCATCCGGGAAGAATCACACTGTAGTCCTTACTGAGGATGGACATTCTTTCGCCTTTGGCTGGAATAAGCATGGACAGCTGGGTTCAGGTTCAGCAAAAAATGAAGTTGAGGCTTCCCCCGTTCGCTGTCAAGTGTCTGAGGTTAAAAATGTTGCTTGTGGGGGTGACTTCACTGTGTGGTTATCTAGTGTTGAAGGAGCTTCTATACTAACTGCCGGCCTTCCACAGTATGGGCAACTTGGGCATGGTACAGATAATGAGTATAATACTAAAGACAGCTCAGTGAAGCTTGCTTATGAAGCCCAACCACGCCCTAAAGCAATAGCCTCTCTAGCTGGGGAAATTATTGTGAAAGTTGCATGTGGAACAAATCATACAGTGGCAGTGGATGCAAATGGCTATGTTTATACGTGGGGCTATGGTGGTTATGGAAGGCTTGGACATAGGGAGCAGAAGGATGAATGGTCTCCTCGTCGTGTTGATATCTTCCAAAGGAATAATATTCTGCCTCCTGATGCAATTATTTCAGCTGGTTCTGTAAACTCTGCATGTACTGCAGGTGGAGGGCAATTGTATATGTGGGGTAAAATTAAGAATACAGGTGACGACTGGATGTATCCTAAACCACTTATGGACTTAAGTGGCTGGAATTTGCGTTGCATGGATTCAGGCAATATGCACCATTTCGTTGGTGCTGATTCCTCCTGCATAAGCTGGGGTCATGCTCAAAATGGAGAGCTGGGATATGGCCCTAATGGACAGAAGTCTTCTGCAGTTCCCAAAAAGGTGGATATCCTTGAGGGTATGCATGTTATGAGTGTTGCATGTGGACTTGGCCATTCCATGGTTATTGTTGATAGAACAACTGTTGGTGACCGACTTGATCAGCTTGAGGTGTATGATGGCAAAGCTTCTGTTGAAGGGAGTGAGGAACCTGTGAGTGCCGCTCCAGCTTCTAAGCAAACTCCTAAAAGGGGTGCTTCAAAAGCATCTGAAAATTCCAAGAGGAAGAAGTCAAAAGAACCTTCTGATTCGGAAGATGAAGAAGACAGCGATGAGCCTGATGACGACAGTGATGGAAGCAATGATGAGGACAATGGTGAGCAAGAACCTAAAAGTCGACGAGGTGGGAAGACTTCTGGTAGTGGTAGAGGCAATGGAGCTAAAAAGGCGGCACCAGCTGAGGTAAAGCGTGGACGGGGTCGCCCTCCCGCAAATAAAAGCCCAAGTCCTGCACCAGCAAAAACTGCAACTGGTAAGAGAGGAAGACCTCGCAGGTCGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
RCC1

Protein Analysis

539

Amino Acids

57.52

Weight (kDa)

7.9

Isoelectric Point (pI)

45.08

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
WD40_RLD PF25390 12 - 307 2.6e-57 RCC1-like domain
RCC1 PF00415 72 - 121 7.6e-16 Regulator of chromosome condensation (RCC1) repeat
Alsin_RLD PF25384 74 - 158 8.7e-11 Alsin RCC1-like domain
RCC1_2 PF13540 108 - 137 1.5e-07 Regulator of chromosome condensation (RCC1) repeat
RCC1 PF00415 124 - 170 3.5e-08 Regulator of chromosome condensation (RCC1) repeat
RCC1 PF00415 181 - 240 2.2e-08 Regulator of chromosome condensation (RCC1) repeat
RCC1_2 PF13540 227 - 255 8.8e-09 Regulator of chromosome condensation (RCC1) repeat
RCC1 PF00415 243 - 279 3.5e-08 Regulator of chromosome condensation (RCC1) repeat
WD40_RLD PF25390 314 - 398 5e-08 RCC1-like domain
RCC1 PF00415 348 - 395 6.8e-09 Regulator of chromosome condensation (RCC1) repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0012326)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G19880
fragaria_vesca FvH4_2g38830 FvH4_2g38830
malus_domestica MD08G1015900.v1.1 MD15G1014900.v1.1
prunus_persica Prupe.1G369200_v2.0.a1 Prupe.1G369200_v2.0.a1
pyrus_communis pycom08g01390 pycom15g01290
rosa_chinensis RchiOBHm_Chr6g0302441
rosa_laevigata RLG00000011171
rosa_multiflora Rmu_sc0003633.1_g000040
rosa_roxburghii Rroxscaffold_7G00165780
rosa_rugosa Rorug06G0314300
rosa_samantha Rh6AG427200 Rh6BG475500 Rh6CG439400 Rh6DG426400
rosa_wichuraiana Rw6G036960

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 881
Acc36I ACCTGC 2 cut(s) 881, 1599
AccB1I GGYRCC 2 cut(s) 101, 1507
AccB7I CCANNNNNTGG 2 cut(s) 563, 1177
AccBSI CCGCTC 1 cut(s) 1280
AccI GTMKAC 2 cut(s) 150, 1453
AccII CGCG 2 cut(s) 133, 282
AciI CCGC 8 cut(s) 8, 17, 63, 139, 220, 1278, 1505, 1545
AcoI YGGCCR 1 cut(s) 1168
AcsI RAATTY 2 cut(s) 982, 1330
AcyI GRCGYC 2 cut(s) 81, 102
AdeI CACNNNGTG 1 cut(s) 510
AfaI GTAC 4 cut(s) 70, 317, 583, 886
AfiI CCNNNNNNNGG 6 cut(s) 90, 367, 393, 563, 1177, 1307
AflII CTTAAG 1 cut(s) 970
AgsI TTSAA 4 cut(s) 110, 527, 1253, 1317
AjnI CCWGG 2 cut(s) 12, 230
Alw26I GTCTC 1 cut(s) 804
Ama87I CYCGRG 1 cut(s) 175
AoxI GGCC 5 cut(s) 259, 287, 550, 1081, 1168
ApeKI GCWGC 1 cut(s) 253
ApoI RAATTY 2 cut(s) 982, 1330
ArsI GACNNNNNNTTYG 2 cut(s) 149, 181
AspLEI GCGC 4 cut(s) 96, 104, 135, 282
AspS9I GGNCC 3 cut(s) 10, 259, 1082
AsuC2I CCSGG 1 cut(s) 340
AsuHPI GGTGA 5 cut(s) 278, 509, 947, 1217, 1445
AsuII TTCGAA 1 cut(s) 311
AvaI CYCGRG 1 cut(s) 175
AvaII GGWCC 1 cut(s) 10
BalI TGGCCA 1 cut(s) 1170
BanI GGYRCC 2 cut(s) 101, 1507
BbsI GAAGAC 4 cut(s) 1092, 1386, 1472, 1606
BbvCI CCTCAGC 1 cut(s) 1515
BbvI GCAGC 1 cut(s) 265
BccI CCATC 3 cut(s) 365, 1229, 1403
BciT130I CCWGG 2 cut(s) 14, 232
BciVI GTATCC 1 cut(s) 960
BclI TGATCA 1 cut(s) 1216
BcnI CCSGG 1 cut(s) 340
BcoDI GTCTC 1 cut(s) 804
BfaI CTAG 2 cut(s) 519, 665
BfmI CTRYAG 4 cut(s) 294, 354, 888, 1104
BfoI RGCGCY 1 cut(s) 105
BfrI CTTAAG 1 cut(s) 970
BfuAI ACCTGC 2 cut(s) 881, 1599
BfuI GTATCC 1 cut(s) 960
BisI GCNGC 3 cut(s) 254, 1278, 1506
BlsI GCNGC 3 cut(s) 255, 1279, 1507
Bme1390I CCNGG 3 cut(s) 14, 232, 340
Bme18I GGWCC 1 cut(s) 10
BmeT110I CYCGRG 1 cut(s) 175
BmgT120I GGNCC 3 cut(s) 10, 259, 1082
BmiI GGNNCC 3 cut(s) 103, 1266, 1509
BmrFI CCNGG 3 cut(s) 14, 232, 340
BmsI GCATC 3 cut(s) 712, 838, 1331
BoxI GACNNNNGTC 1 cut(s) 1096
BpiI GAAGAC 4 cut(s) 1092, 1386, 1472, 1606
BplI GAGNNNNNCTC 2 cut(s) 1264, 1296
BpmI CTGGAG 1 cut(s) 1266
Bpu10I CCTNAGC 1 cut(s) 1515
Bpu14I TTCGAA 1 cut(s) 311
BpuEI CTTGAG 2 cut(s) 1151, 1244
BpuMI CCSGG 1 cut(s) 340
BsaAI YACGTR 1 cut(s) 744
BsaHI GRCGYC 2 cut(s) 81, 102
BsaI GGTCTC 1 cut(s) 804
BsaJI CCNNGG 4 cut(s) 174, 231, 262, 1176
Bsc4I CCNNNNNNNGG 6 cut(s) 90, 367, 393, 563, 1177, 1307
Bse118I RCCGGY 1 cut(s) 548
Bse1I ACTGG 2 cut(s) 947, 1591
Bse3DI GCAATG 3 cut(s) 247, 1423, 1495
BseBI CCWGG 2 cut(s) 14, 232
BseDI CCNNGG 4 cut(s) 174, 231, 262, 1176
BseGI GGATG 7 cut(s) 159, 214, 335, 376, 727, 796, 951
BseLI CCNNNNNNNGG 6 cut(s) 90, 367, 393, 563, 1177, 1307
BseMI GCAATG 3 cut(s) 247, 1423, 1495
BseMII CTCAG 4 cut(s) 357, 462, 627, 1506
BseNI ACTGG 2 cut(s) 947, 1591
BseRI GAGGAG 1 cut(s) 792
BseXI GCAGC 1 cut(s) 265
BseYI CCCAGC 5 cut(s) 256, 412, 668, 1047, 1072
BsgI GTGCAG 1 cut(s) 1551
Bsh1236I CGCG 2 cut(s) 133, 282
BshFI GGCC 5 cut(s) 261, 289, 552, 1083, 1170
BshNI GGYRCC 2 cut(s) 101, 1507
BsiHKCI CYCGRG 1 cut(s) 175
BsiSI CCGG 2 cut(s) 339, 549
BslFI GGGAC 2 cut(s) 92, 249
BslI CCNNNNNNNGG 6 cut(s) 90, 367, 393, 563, 1177, 1307
BsmAI GTCTC 1 cut(s) 804
BsmFI GGGAC 2 cut(s) 92, 249
BsnI GGCC 5 cut(s) 261, 289, 552, 1083, 1170
Bso31I GGTCTC 1 cut(s) 804
BsoBI CYCGRG 1 cut(s) 175
Bsp119I TTCGAA 1 cut(s) 311
Bsp143I GATC 2 cut(s) 120, 1216
Bsp19I CCATGG 2 cut(s) 262, 1176
BspACI CCGC 8 cut(s) 8, 17, 63, 139, 220, 1278, 1505, 1545
BspANI GGCC 5 cut(s) 261, 289, 552, 1083, 1170
BspCNI CTCAG 4 cut(s) 358, 463, 626, 1507
BspFNI CGCG 2 cut(s) 133, 282
BspLI GGNNCC 3 cut(s) 103, 1266, 1509
BspMAI CTGCAG 2 cut(s) 892, 1108
BspMI ACCTGC 2 cut(s) 881, 1599
BspQI GCTCTTC 1 cut(s) 190
BspT104I TTCGAA 1 cut(s) 311
BspT107I GGYRCC 2 cut(s) 101, 1507
BspTI CTTAAG 1 cut(s) 970
BspTNI GGTCTC 1 cut(s) 804
BsrBI CCGCTC 1 cut(s) 1280
BsrDI GCAATG 3 cut(s) 247, 1423, 1495
BsrFI RCCGGY 1 cut(s) 548
BsrI ACTGG 2 cut(s) 947, 1591
BssAI RCCGGY 1 cut(s) 548
BssECI CCNNGG 4 cut(s) 174, 231, 262, 1176
BssMI GATC 2 cut(s) 120, 1216
BssNI GRCGYC 2 cut(s) 81, 102
BssT1I CCWWGG 2 cut(s) 262, 1176
Bst2UI CCWGG 2 cut(s) 14, 232
Bst4CI ACNGT 7 cut(s) 295, 355, 508, 561, 712, 1201, 1406
Bst6I CTCTTC 1 cut(s) 190
BstACI GRCGYC 2 cut(s) 81, 102
BstAFI CTTAAG 1 cut(s) 970
BstAPI GCANNNNNTGC 3 cut(s) 722, 887, 1580
BstBAI YACGTR 1 cut(s) 744
BstBI TTCGAA 1 cut(s) 311
BstC8I GCNNGC 2 cut(s) 550, 624
BstDEI CTNAG 5 cut(s) 366, 471, 613, 1290, 1515
BstDSI CCRYGG 2 cut(s) 262, 1176
BstEII GGTNACC 1 cut(s) 1205
BstENI CCTNNNNNAGG 1 cut(s) 365
BstF5I GGATG 7 cut(s) 159, 214, 335, 376, 727, 796, 951
BstFNI CGCG 2 cut(s) 133, 282
BstH2I RGCGCY 1 cut(s) 105
BstHHI GCGC 4 cut(s) 96, 104, 135, 282
BstKTI GATC 2 cut(s) 123, 1219
BstMAI GTCTC 1 cut(s) 804
BstMBI GATC 2 cut(s) 120, 1216
BstNI CCWGG 2 cut(s) 14, 232
BstNSI RCATGY 4 cut(s) 696, 885, 1145, 1161
BstPAI GACNNNNGTC 1 cut(s) 1096
BstPI GGTNACC 1 cut(s) 1205
BstSCI CCNGG 3 cut(s) 12, 230, 338
BstSFI CTRYAG 4 cut(s) 294, 354, 888, 1104
BstUI CGCG 2 cut(s) 133, 282
BstV1I GCAGC 1 cut(s) 265
BstV2I GAAGAC 4 cut(s) 1092, 1386, 1472, 1606
BstXI CCANNNNNNTGG 2 cut(s) 1022, 1120
BsuI GTATCC 1 cut(s) 960
BsuRI GGCC 5 cut(s) 261, 289, 552, 1083, 1170
BtgI CCRYGG 2 cut(s) 262, 1176
BtgZI GCGATG 1 cut(s) 1401
BtsCI GGATG 7 cut(s) 159, 214, 335, 376, 727, 796, 951
BtsI GCAGTG 1 cut(s) 723
BtsIMutI CAGTG 6 cut(s) 351, 504, 621, 717, 723, 1411
BveI ACCTGC 2 cut(s) 881, 1599
Cac8I GCNNGC 2 cut(s) 550, 624
CfoI GCGC 4 cut(s) 96, 104, 135, 282
Cfr10I RCCGGY 1 cut(s) 548
Cfr13I GGNCC 3 cut(s) 10, 259, 1082
CseI GACGC 2 cut(s) 89, 246
Csp6I GTAC 4 cut(s) 69, 316, 582, 885
CviQI GTAC 4 cut(s) 69, 316, 582, 885
DdeI CTNAG 5 cut(s) 366, 471, 613, 1290, 1515
DinI GGCGCC 1 cut(s) 103
DpnI GATC 2 cut(s) 122, 1218
DpnII GATC 2 cut(s) 120, 1216
DraIII CACNNNGTG 1 cut(s) 510
EaeI YGGCCR 1 cut(s) 1168
Eam1104I CTCTTC 1 cut(s) 190
EarI CTCTTC 1 cut(s) 190
EciI GGCGGA 2 cut(s) 32, 128
Eco130I CCWWGG 2 cut(s) 262, 1176
Eco31I GGTCTC 1 cut(s) 804
Eco32I GATATC 2 cut(s) 817, 1126
Eco47I GGWCC 1 cut(s) 10
Eco88I CYCGRG 1 cut(s) 175
Eco91I GGTNACC 1 cut(s) 1205
EcoNI CCTNNNNNAGG 1 cut(s) 365
EcoO65I GGTNACC 1 cut(s) 1205
EcoRII CCWGG 2 cut(s) 12, 230
EcoRV GATATC 2 cut(s) 817, 1126
EcoT14I CCWWGG 2 cut(s) 262, 1176
EcoT22I ATGCAT 1 cut(s) 1143
EgeI GGCGCC 1 cut(s) 103
EheI GGCGCC 1 cut(s) 103
ErhI CCWWGG 2 cut(s) 262, 1176
FalI AAGNNNNNCTT 2 cut(s) 1297, 1329
FaqI GGGAC 2 cut(s) 92, 249
FauI CCCGC 1 cut(s) 1552
FbaI TGATCA 1 cut(s) 1216
FblI GTMKAC 2 cut(s) 150, 1453
Fnu4HI GCNGC 3 cut(s) 254, 1278, 1506
FokI GGATG 7 cut(s) 146, 221, 322, 383, 734, 803, 958
Fsp4HI GCNGC 3 cut(s) 254, 1278, 1506
FspBI CTAG 2 cut(s) 519, 665
GlaI GCGC 4 cut(s) 95, 103, 134, 281
GluI GCNGC 3 cut(s) 254, 1278, 1506
GsaI CCCAGC 5 cut(s) 260, 416, 672, 1051, 1076
GsuI CTGGAG 1 cut(s) 1266
HaeII RGCGCY 1 cut(s) 105
HaeIII GGCC 5 cut(s) 261, 289, 552, 1083, 1170
HapII CCGG 2 cut(s) 339, 549
HgaI GACGC 2 cut(s) 89, 246
HhaI GCGC 4 cut(s) 96, 104, 135, 282
Hin1I GRCGYC 2 cut(s) 81, 102
Hin6I GCGC 4 cut(s) 94, 102, 133, 280
HinP1I GCGC 4 cut(s) 94, 102, 133, 280
HincII GTYRAC 2 cut(s) 151, 1454
HindII GTYRAC 2 cut(s) 151, 1454
HindIII AAGCTT 2 cut(s) 620, 1242
HinfI GANTC 5 cut(s) 165, 346, 998, 1031, 1364
HpaII CCGG 2 cut(s) 339, 549
HphI GGTGA 5 cut(s) 278, 509, 947, 1217, 1445
Hpy166II GTNNAC 5 cut(s) 151, 874, 1163, 1454, 1529
Hpy188I TCNGA 6 cut(s) 164, 304, 472, 1327, 1363, 1369
Hpy188III TCNNGA 2 cut(s) 45, 845
Hpy8I GTNNAC 5 cut(s) 151, 874, 1163, 1454, 1529
Hpy99I CGWCG 4 cut(s) 152, 173, 810, 1458
HpyCH4III ACNGT 7 cut(s) 295, 355, 508, 561, 712, 1201, 1406
HpyCH4IV ACGT 2 cut(s) 71, 743
HpyF3I CTNAG 5 cut(s) 366, 471, 613, 1290, 1515
HpySE526I ACGT 2 cut(s) 71, 743
Hsp92I GRCGYC 2 cut(s) 81, 102
HspAI GCGC 4 cut(s) 94, 102, 133, 280
KasI GGCGCC 1 cut(s) 101
KroI GCCGGC 1 cut(s) 548
KroNI GCCGGC 1 cut(s) 550
Ksp22I TGATCA 1 cut(s) 1216
Kzo9I GATC 2 cut(s) 120, 1216
LguI GCTCTTC 1 cut(s) 190
LmnI GCTCC 4 cut(s) 530, 781, 1285, 1493
Lsp1109I GCAGC 1 cut(s) 265
LweI GCATC 3 cut(s) 712, 838, 1331
MaeI CTAG 2 cut(s) 519, 665
MaeII ACGT 2 cut(s) 71, 743
MaeIII GTNAC 3 cut(s) 497, 935, 1205
MalI GATC 2 cut(s) 122, 1218
MbiI CCGCTC 1 cut(s) 1280
MboI GATC 2 cut(s) 120, 1216
MfeI CAATTG 1 cut(s) 902
MlsI TGGCCA 1 cut(s) 1170
MluCI AATT 8 cut(s) 115, 273, 675, 852, 902, 921, 982, 1330
MluNI TGGCCA 1 cut(s) 1170
Mly113I GGCGCC 1 cut(s) 102
MmeI TCCRAC 1 cut(s) 282
Mox20I TGGCCA 1 cut(s) 1170
Mph1103I ATGCAT 1 cut(s) 1143
MroNI GCCGGC 1 cut(s) 548
MscI TGGCCA 1 cut(s) 1170
MseI TTAA 3 cut(s) 477, 924, 971
Msp20I TGGCCA 1 cut(s) 1170
MspA1I CMGCKG 4 cut(s) 256, 412, 863, 1514
MspCI CTTAAG 1 cut(s) 970
MspI CCGG 2 cut(s) 339, 549
MspR9I CCNGG 3 cut(s) 14, 232, 340
MunI CAATTG 1 cut(s) 902
MvaI CCWGG 2 cut(s) 14, 232
MvnI CGCG 2 cut(s) 133, 282
NaeI GCCGGC 1 cut(s) 550
NarI GGCGCC 1 cut(s) 102
NciI CCSGG 1 cut(s) 340
NcoI CCATGG 2 cut(s) 262, 1176
NdeII GATC 2 cut(s) 120, 1216
NgoMIV GCCGGC 1 cut(s) 548
NlaIV GGNNCC 3 cut(s) 103, 1266, 1509
NmuCI GTSAC 3 cut(s) 497, 935, 1205
NsiI ATGCAT 1 cut(s) 1143
NspI RCATGY 4 cut(s) 696, 885, 1145, 1161
NspV TTCGAA 1 cut(s) 311
PaqCI CACCTGC 1 cut(s) 881
PciSI GCTCTTC 1 cut(s) 190
PcsI WCGNNNNNNNCGW 2 cut(s) 153, 308
PdiI GCCGGC 1 cut(s) 550
PfeI GAWTC 5 cut(s) 165, 346, 998, 1031, 1364
PflFI GACNNNGTC 1 cut(s) 1533
PflMI CCANNNNNTGG 2 cut(s) 563, 1177
PfoI TCCNGGA 1 cut(s) 338
PkrI GCNGC 3 cut(s) 255, 1279, 1507
PluTI GGCGCC 1 cut(s) 105
Ppu21I YACGTR 1 cut(s) 744
PshAI GACNNNNGTC 1 cut(s) 1096
Psp6I CCWGG 2 cut(s) 12, 230
PspEI GGTNACC 1 cut(s) 1205
PspFI CCCAGC 5 cut(s) 256, 412, 668, 1047, 1072
PspGI CCWGG 2 cut(s) 12, 230
PspN4I GGNNCC 3 cut(s) 103, 1266, 1509
PspPI GGNCC 3 cut(s) 10, 259, 1082
PsrI GAACNNNNNNTAC 2 cut(s) 691, 723
PstI CTGCAG 2 cut(s) 892, 1108
PsyI GACNNNGTC 1 cut(s) 1533
PvuII CAGCTG 4 cut(s) 256, 412, 863, 1514
RsaI GTAC 4 cut(s) 70, 317, 583, 886
RsaNI GTAC 4 cut(s) 69, 316, 582, 885
SalI GTCGAC 2 cut(s) 149, 1452
SapI GCTCTTC 1 cut(s) 190
SaqAI TTAA 3 cut(s) 477, 924, 971
SatI GCNGC 3 cut(s) 254, 1278, 1506
Sau3AI GATC 2 cut(s) 120, 1216
Sau96I GGNCC 3 cut(s) 10, 259, 1082
ScrFI CCNGG 3 cut(s) 14, 232, 340
SfaNI GCATC 3 cut(s) 712, 838, 1331
SfcI CTRYAG 4 cut(s) 294, 354, 888, 1104
SfoI GGCGCC 1 cut(s) 103
SfuI TTCGAA 1 cut(s) 311
SinI GGWCC 1 cut(s) 10
SmlI CTYRAG 3 cut(s) 970, 1130, 1223
SmoI CTYRAG 3 cut(s) 970, 1130, 1223
Sse9I AATT 8 cut(s) 115, 273, 675, 852, 902, 921, 982, 1330
SsiI CCGC 8 cut(s) 8, 17, 63, 139, 220, 1278, 1505, 1545
SspDI GGCGCC 1 cut(s) 101
SspI AATATT 1 cut(s) 835
SspMI CTAG 2 cut(s) 519, 665
StyD4I CCNGG 3 cut(s) 12, 230, 338
StyI CCWWGG 2 cut(s) 262, 1176
TaaI ACNGT 7 cut(s) 295, 355, 508, 561, 712, 1201, 1406
TaiI ACGT 2 cut(s) 74, 746
TaqI TCGA 4 cut(s) 150, 156, 311, 1453
TaqII GACCGA 1 cut(s) 1224
TasI AATT 8 cut(s) 115, 273, 675, 852, 902, 921, 982, 1330
TatI WGTACW 2 cut(s) 315, 884
TauI GCSGC 2 cut(s) 1280, 1508
TfiI GAWTC 5 cut(s) 165, 346, 998, 1031, 1364
Tru1I TTAA 3 cut(s) 477, 924, 971
Tru9I TTAA 3 cut(s) 477, 924, 971
TscAI CASTG 6 cut(s) 358, 511, 621, 717, 723, 1411
TseFI GTSAC 3 cut(s) 497, 935, 1205
TseI GCWGC 1 cut(s) 253
Tsp45I GTSAC 3 cut(s) 497, 935, 1205
TspDTI ATGAA 5 cut(s) 324, 450, 645, 807, 1389
TspRI CASTG 6 cut(s) 358, 511, 621, 717, 723, 1411
Tth111I GACNNNGTC 1 cut(s) 1533
Van91I CCANNNNNTGG 2 cut(s) 563, 1177
Vha464I CTTAAG 1 cut(s) 970
VpaK11BI GGWCC 1 cut(s) 10
XagI CCTNNNNNAGG 1 cut(s) 365
XapI RAATTY 2 cut(s) 982, 1330
XceI RCATGY 4 cut(s) 696, 885, 1145, 1161
XmiI GTMKAC 2 cut(s) 150, 1453
XspI CTAG 2 cut(s) 519, 665
Zsp2I ATGCAT 1 cut(s) 1143
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.