Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr15

Orthogroup ID

OG0008397

Physical Location & Seq

Genomic Coordinates Forward (+)

6182130 .. 6184764

Gene Structure 2635 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

MD15G1088600.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1341 bp

ATGGCGGAGGAGGAGGTTGTGGTAGCCGCGGAGAGCCCTATGCCGTCGGATCACAAGCGCAAGCTCGAGGATTTGGAGCCTAAAGCAGCACCGGAAATAGTTGAGCTCGACTCCAACGGTCCCGATGACGCGAATGCAGAGCCTGATTGCACCGAAGAAGTCGATGTATCGCCGTCCGATAAATCAGAAGCGAAGAGGCCTCGCCTTGATGACAAGCCCGACGGAATAGCTAGTGAGAATGGCCACCAAGAGGAGAAGGTAGATGAGCCCAAAAAGGAGAATGAGGATCAGCCAAGTGTAGATAGCGGTGACTTGGAGGTCCCCCAACCTGCGTCTGTGGAAGTTACCGAAGCAGTGACCGACGAGCAAAAGTCTGAAGTTAATGAACTACAGAATGGCATGAATAGTGAGCCGAGTGACACCCAAAATCATGCTGAGAATTCTGTGGCGGAAAAAGCTGAGGAACCCTCTCAAGGGGAGTCTCAACCACACTATGCAGAGGAACCTCAGCAAGGTGATGCTTACTCTGCGCAACAAGAACAGCCTTCTGTGAGTGAGACTGTGACGCACAAAATGGAGGTTCCTAATAATAAGGTTGGGGTTTTAATTGGCAAGTCGGGGGATACTATACGGTACTTGCAATACAATTCTGGAGCAAAGATTCAAATCACAAGGGATTCCGATGCAGATCCATATTCTGCAACCAGGCCAGTGGAGATAATAGGAACTTTGGATAATATAAGCAAAGCAGAGAAACTGATAAATGCTGTTATTGCCGAGGCTGATGCAGGGGGTTCTCCTTCTTTGGTTGCTAGAGGCGTTGCTACTGCACTGGCTGTTGCAGCAGCAGAACAAATTCAGATTCAAGTTCCGAATGAGAAGGTTGGTTTGATAATTGGCAGAGGTGGAGAGACCATTAAAGGTCTGCAGACCCGATCAGGGGCACGCATCCAGTTGATACCCCAACATCTTCCGGAGGGGGATGAATCTAAAGAAAGGACTGTCCGAGTTACTGGTGATAAGAAGCAGATTGAAGTTGCAAGAGAATTGATAAAGGAAGTTATGAATCAGGTTGTTACTTTTGTGGTTATTATATTTTGTGCGAGCGGTATTGTGGTTGCTACTGTGGTTTCTTCTTCATTGGACCATTGTCACTGTATGCTGGTTGAGTTGTTTTGTTTCTTATACCTATTTCTGATCTCATACACGTCATATTCTATGCTACAAATGATTGGATGCATTTCTTTTTTAATTCTATTTGACATGTGCCGGCTTAATGGTTGTCCCCACTTAGTTGATATGTCGTCAACCATATCCTATGCTCGTCAAGATTTAAGATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000976 GO:0000977 GO:0000978 GO:0000981 GO:0000982 GO:0000987 GO:0001012 GO:0001067 GO:0001077 GO:0001228 GO:0003674 GO:0003676 GO:0003677 GO:0003690 GO:0003700 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0006139 GO:0006351 GO:0006355 GO:0006357 GO:0006366 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009889 GO:0009891 GO:0009893 GO:0009987 GO:0010467 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010628 GO:0016070 GO:0018130 GO:0019219 GO:0019222 GO:0019438 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0032774 GO:0034641 GO:0034645 GO:0034654 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043565 GO:0044212 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044271 GO:0044424 GO:0044464 GO:0045893 GO:0045935 GO:0045944 GO:0046483 GO:0048518 GO:0048522 GO:0050789 GO:0050794 GO:0051171 GO:0051173 GO:0051252 GO:0051254 GO:0060255 GO:0065007 GO:0071704 GO:0080090 GO:0090304 GO:0097159 GO:0097659 GO:0140110 GO:1901360 GO:1901362 GO:1901363 GO:1901576 GO:1902680 GO:1903506 GO:1903508 GO:1990837 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

KH_1

Protein Analysis

447

Amino Acids

48.5

Weight (kDa)

4.51

Isoelectric Point (pI)

51.01

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
KH_1	PF00013	189 - 255	1.2e-16	KH domain
KH_1	PF00013	286 - 353	4.7e-19	KH domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0008397)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G33680 AT4G10070
fragaria_vesca	FvH4_2g35080 FvH4_2g35080 FvH4_2g35080
malus_domestica	MD08G1108100.v1.1 MD15G1088600.v1.1 MD15G1088800.v1.1
prunus_persica	Prupe.1G442700_v2.0.a1
pyrus_communis	pycom08g09010 pycom15g08310
rosa_chinensis	RchiOBHm_Chr6g0306891
rosa_laevigata	RLG00000010757
rosa_multiflora	Rmu_co8448611.1_g000001 Rmu_co8474845.1_g000001 Rmu_sc0018770.1_g000003
rosa_roxburghii	Rroxscaffold_7G00161380
rosa_rugosa	Rorug06G0354100
rosa_samantha	Rh6AG465700 Rh6BG435100 Rh6CG480200 Rh6DG467100
rosa_wichuraiana	Rw6G040590

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	317
Acc16I	TGCGCA	1 cut(s)	531
Acc36I	ACCTGC	1 cut(s)	337
AccBSI	CCGCTC	1 cut(s)	1107
AccII	CGCG	2 cut(s)	29, 131
AccIII	TCCGGA	1 cut(s)	973
AciI	CCGC	6 cut(s)	5, 27, 29, 306, 449, 1107
AclWI	GGATC	3 cut(s)	57, 294, 683
AcoI	YGGCCR	1 cut(s)	241
AcsI	RAATTY	2 cut(s)	439, 855
AcuI	CTGAAG	1 cut(s)	396
AfaI	GTAC	1 cut(s)	635
AfiI	CCNNNNNNNGG	6 cut(s)	250, 473, 474, 512, 939, 940
AflIII	ACRYGT	2 cut(s)	1206, 1263
AgsI	TTSAA	3 cut(s)	665, 866, 1034
AjiI	CACGTC	1 cut(s)	1209
AjnI	CCWGG	1 cut(s)	704
AluBI	AGCT	4 cut(s)	64, 106, 230, 458
AluI	AGCT	4 cut(s)	64, 106, 230, 458
Alw21I	GWGCWC	1 cut(s)	108
Alw26I	GTCTC	3 cut(s)	486, 551, 905
AlwI	GGATC	3 cut(s)	57, 294, 683
AlwNI	CAGNNNCTG	1 cut(s)	143
Ama87I	CYCGRG	1 cut(s)	65
Aor13HI	TCCGGA	1 cut(s)	973
AoxI	GGCC	3 cut(s)	197, 241, 707
ApeKI	GCWGC	3 cut(s)	86, 842, 845
ApoI	RAATTY	2 cut(s)	439, 855
Asp700I	GAANNNNTTC	1 cut(s)	855
AspLEI	GCGC	2 cut(s)	60, 532
AspS9I	GGNCC	3 cut(s)	119, 319, 1144
AsuHPI	GGTGA	3 cut(s)	320, 527, 1028
AvaI	CYCGRG	1 cut(s)	65
AvaII	GGWCC	3 cut(s)	119, 319, 1144
BaeGI	GKGCMC	1 cut(s)	946
BalI	TGGCCA	1 cut(s)	243
BanII	GRGCYC	3 cut(s)	38, 108, 270
Bbv12I	GWGCWC	1 cut(s)	108
BbvCI	CCTCAGC	2 cut(s)	459, 507
BbvI	GCAGC	3 cut(s)	98, 854, 857
BceAI	ACGGC	2 cut(s)	28, 157
BcgI	CGANNNNNNTGC	2 cut(s)	767, 801
BciT130I	CCWGG	1 cut(s)	706
BciVI	GTATCC	1 cut(s)	616
BcoDI	GTCTC	3 cut(s)	486, 551, 905
BfaI	CTAG	2 cut(s)	231, 813
BfmI	CTRYAG	2 cut(s)	389, 926
BfuAI	ACCTGC	1 cut(s)	337
BfuI	GTATCC	1 cut(s)	616
BisI	GCNGC	4 cut(s)	27, 87, 843, 846
BlsI	GCNGC	4 cut(s)	28, 88, 844, 847
Bme1390I	CCNGG	1 cut(s)	706
Bme18I	GGWCC	3 cut(s)	119, 319, 1144
BmeT110I	CYCGRG	1 cut(s)	65
BmgBI	CACGTC	1 cut(s)	1209
BmgT120I	GGNCC	3 cut(s)	119, 319, 1144
BmiI	GGNNCC	6 cut(s)	78, 121, 321, 465, 504, 582
BmrFI	CCNGG	1 cut(s)	706
BmsI	GCATC	5 cut(s)	508, 673, 775, 957, 1226
BoxI	GACNNNNGTC	1 cut(s)	1149
BplI	GAGNNNNNCTC	4 cut(s)	95, 127, 452, 484
BpmI	CTGGAG	1 cut(s)	672
Bpu10I	CCTNAGC	2 cut(s)	459, 507
BpuEI	CTTGAG	1 cut(s)	456
BsaBI	GATNNNNATC	2 cut(s)	665, 687
BsaI	GGTCTC	1 cut(s)	905
BsaJI	CCNNGG	2 cut(s)	27, 777
BsaWI	WCCGGW	2 cut(s)	91, 973
Bsc4I	CCNNNNNNNGG	6 cut(s)	250, 473, 474, 512, 939, 940
Bse118I	RCCGGY	1 cut(s)	1269
Bse1I	ACTGG	4 cut(s)	710, 837, 952, 1018
Bse8I	GATNNNNATC	2 cut(s)	665, 687
BseAI	TCCGGA	1 cut(s)	973
BseBI	CCWGG	1 cut(s)	706
BseDI	CCNNGG	2 cut(s)	27, 777
BseGI	GGATG	3 cut(s)	948, 988, 1241
BseJI	GATNNNNATC	2 cut(s)	665, 687
BseLI	CCNNNNNNNGG	6 cut(s)	250, 473, 474, 512, 939, 940
BseMII	CTCAG	3 cut(s)	426, 450, 521
BseNI	ACTGG	4 cut(s)	710, 837, 952, 1018
BseRI	GAGGAG	3 cut(s)	23, 26, 266
BseSI	GKGCMC	1 cut(s)	946
BseXI	GCAGC	3 cut(s)	98, 854, 857
BsgI	GTGCAG	1 cut(s)	813
Bsh1236I	CGCG	2 cut(s)	29, 131
BshFI	GGCC	3 cut(s)	199, 243, 709
BsiHKAI	GWGCWC	1 cut(s)	108
BsiHKCI	CYCGRG	1 cut(s)	65
BsiSI	CCGG	3 cut(s)	92, 974, 1270
BslFI	GGGAC	3 cut(s)	105, 305, 1269
BslI	CCNNNNNNNGG	6 cut(s)	250, 473, 474, 512, 939, 940
BsmAI	GTCTC	3 cut(s)	486, 551, 905
BsmFI	GGGAC	3 cut(s)	105, 305, 1269
BsmI	GAATGC	1 cut(s)	139
BsnI	GGCC	3 cut(s)	199, 243, 709
Bso31I	GGTCTC	1 cut(s)	905
BsoBI	CYCGRG	1 cut(s)	65
Bsp1286I	GDGCHC	4 cut(s)	38, 108, 270, 946
Bsp13I	TCCGGA	1 cut(s)	973
Bsp143I	GATC	5 cut(s)	49, 286, 688, 935, 1197
BspACI	CCGC	6 cut(s)	5, 27, 29, 306, 449, 1107
BspANI	GGCC	3 cut(s)	199, 243, 709
BspCNI	CTCAG	3 cut(s)	427, 451, 520
BspEI	TCCGGA	1 cut(s)	973
BspFNI	CGCG	2 cut(s)	29, 131
BspLI	GGNNCC	6 cut(s)	78, 121, 321, 465, 504, 582
BspMAI	CTGCAG	1 cut(s)	930
BspMI	ACCTGC	1 cut(s)	337
BspPI	GGATC	3 cut(s)	57, 294, 683
BspTNI	GGTCTC	1 cut(s)	905
BsrBI	CCGCTC	1 cut(s)	1107
BsrFI	RCCGGY	1 cut(s)	1269
BsrI	ACTGG	4 cut(s)	710, 837, 952, 1018
BssAI	RCCGGY	1 cut(s)	1269
BssECI	CCNNGG	2 cut(s)	27, 777
BssMI	GATC	5 cut(s)	49, 286, 688, 935, 1197
Bst2UI	CCWGG	1 cut(s)	706
Bst4CI	ACNGT	6 cut(s)	119, 562, 633, 1003, 1126, 1157
Bst6I	CTCTTC	1 cut(s)	188
BstC8I	GCNNGC	4 cut(s)	62, 946, 1105, 1271
BstDEI	CTNAG	4 cut(s)	435, 459, 507, 1291
BstDSI	CCRYGG	1 cut(s)	27
BstENI	CCTNNNNNAGG	1 cut(s)	510
BstF5I	GGATG	3 cut(s)	948, 988, 1241
BstFNI	CGCG	2 cut(s)	29, 131
BstHHI	GCGC	2 cut(s)	60, 532
BstKTI	GATC	5 cut(s)	52, 289, 691, 938, 1200
BstMAI	GTCTC	3 cut(s)	486, 551, 905
BstMBI	GATC	5 cut(s)	49, 286, 688, 935, 1197
BstMWI	GCNNNNNNNGC	4 cut(s)	455, 527, 773, 842
BstNI	CCWGG	1 cut(s)	706
BstNSI	RCATGY	1 cut(s)	1267
BstPAI	GACNNNNGTC	1 cut(s)	1149
BstSCI	CCNGG	1 cut(s)	704
BstSFI	CTRYAG	2 cut(s)	389, 926
BstSLI	GKGCMC	1 cut(s)	946
BstUI	CGCG	2 cut(s)	29, 131
BstV1I	GCAGC	3 cut(s)	98, 854, 857
BstX2I	RGATCY	1 cut(s)	688
BstXI	CCANNNNNNTGG	1 cut(s)	712
BstYI	RGATCY	1 cut(s)	688
BsuI	GTATCC	1 cut(s)	616
BsuRI	GGCC	3 cut(s)	199, 243, 709
BtgI	CCRYGG	1 cut(s)	27
BtrI	CACGTC	1 cut(s)	1209
BtsCI	GGATG	3 cut(s)	948, 988, 1241
BtsI	GCAGTG	1 cut(s)	360
BtsIMutI	CAGTG	4 cut(s)	360, 717, 830, 1153
BveI	ACCTGC	1 cut(s)	337
Cac8I	GCNNGC	4 cut(s)	62, 946, 1105, 1271
CaiI	CAGNNNCTG	1 cut(s)	143
CfoI	GCGC	2 cut(s)	60, 532
Cfr10I	RCCGGY	1 cut(s)	1269
Cfr13I	GGNCC	3 cut(s)	119, 319, 1144
Cfr42I	CCGCGG	1 cut(s)	30
CseI	GACGC	3 cut(s)	137, 321, 574
Csp6I	GTAC	1 cut(s)	634
CviAII	CATG	3 cut(s)	400, 431, 1264
CviQI	GTAC	1 cut(s)	634
DdeI	CTNAG	4 cut(s)	435, 459, 507, 1291
DpnI	GATC	5 cut(s)	51, 288, 690, 937, 1199
DpnII	GATC	5 cut(s)	49, 286, 688, 935, 1197
DrdI	GACNNNNNNGTC	1 cut(s)	317
DseDI	GACNNNNNNGTC	1 cut(s)	317
EaeI	YGGCCR	1 cut(s)	241
Eam1104I	CTCTTC	1 cut(s)	188
EarI	CTCTTC	1 cut(s)	188
EciI	GGCGGA	2 cut(s)	20, 464
Ecl136II	GAGCTC	1 cut(s)	106
Eco147I	AGGCCT	1 cut(s)	199
Eco24I	GRGCYC	3 cut(s)	38, 108, 270
Eco31I	GGTCTC	1 cut(s)	905
Eco47I	GGWCC	3 cut(s)	119, 319, 1144
Eco53kI	GAGCTC	1 cut(s)	106
Eco57I	CTGAAG	1 cut(s)	396
Eco88I	CYCGRG	1 cut(s)	65
EcoICRI	GAGCTC	1 cut(s)	106
EcoNI	CCTNNNNNAGG	1 cut(s)	510
EcoO109I	RGGNCCY	1 cut(s)	319
EcoRI	GAATTC	1 cut(s)	439
EcoRII	CCWGG	1 cut(s)	704
EcoT22I	ATGCAT	1 cut(s)	1241
EcoT38I	GRGCYC	3 cut(s)	38, 108, 270
FaeI	CATG	3 cut(s)	403, 434, 1267
FaqI	GGGAC	3 cut(s)	105, 305, 1269
FatI	CATG	3 cut(s)	399, 430, 1263
Fnu4HI	GCNGC	4 cut(s)	27, 87, 843, 846
FokI	GGATG	3 cut(s)	935, 995, 1248
FriOI	GRGCYC	3 cut(s)	38, 108, 270
Fsp4HI	GCNGC	4 cut(s)	27, 87, 843, 846
FspBI	CTAG	2 cut(s)	231, 813
FspI	TGCGCA	1 cut(s)	531
GlaI	GCGC	2 cut(s)	59, 531
GluI	GCNGC	4 cut(s)	27, 87, 843, 846
GsuI	CTGGAG	1 cut(s)	672
HaeIII	GGCC	3 cut(s)	199, 243, 709
HapII	CCGG	3 cut(s)	92, 974, 1270
HgaI	GACGC	3 cut(s)	137, 321, 574
HhaI	GCGC	2 cut(s)	60, 532
Hin1II	CATG	3 cut(s)	403, 434, 1267
Hin6I	GCGC	2 cut(s)	58, 530
HinP1I	GCGC	2 cut(s)	58, 530
HincII	GTYRAC	1 cut(s)	1308
HindII	GTYRAC	1 cut(s)	1308
HinfI	GANTC	7 cut(s)	110, 479, 661, 677, 862, 986, 1066
HpaII	CCGG	3 cut(s)	92, 974, 1270
HphI	GGTGA	3 cut(s)	320, 527, 1028
Hpy166II	GTNNAC	1 cut(s)	1308
Hpy188I	TCNGA	9 cut(s)	49, 178, 187, 376, 682, 861, 873, 1007, 1197
Hpy188III	TCNNGA	4 cut(s)	122, 651, 974, 1328
Hpy8I	GTNNAC	1 cut(s)	1308
Hpy99I	CGWCG	3 cut(s)	49, 224, 365
HpyAV	CCTTC	4 cut(s)	250, 555, 810, 874
HpyCH4III	ACNGT	6 cut(s)	119, 562, 633, 1003, 1126, 1157
HpyCH4IV	ACGT	1 cut(s)	1208
HpyF10VI	GCNNNNNNNGC	4 cut(s)	455, 527, 773, 842
HpyF3I	CTNAG	4 cut(s)	435, 459, 507, 1291
HpySE526I	ACGT	1 cut(s)	1208
Hsp92II	CATG	3 cut(s)	403, 434, 1267
HspAI	GCGC	2 cut(s)	58, 530
Kpn2I	TCCGGA	1 cut(s)	973
KroI	GCCGGC	1 cut(s)	1269
KroNI	GCCGGC	1 cut(s)	1271
KspI	CCGCGG	1 cut(s)	30
Kzo9I	GATC	5 cut(s)	49, 286, 688, 935, 1197
LmnI	GCTCC	2 cut(s)	76, 653
Lsp1109I	GCAGC	3 cut(s)	98, 854, 857
LweI	GCATC	5 cut(s)	508, 673, 775, 957, 1226
MaeI	CTAG	2 cut(s)	231, 813
MaeII	ACGT	1 cut(s)	1208
MaeIII	GTNAC	8 cut(s)	308, 343, 355, 416, 562, 1009, 1075, 1151
MalI	GATC	5 cut(s)	51, 288, 690, 937, 1199
MbiI	CCGCTC	1 cut(s)	1107
MboI	GATC	5 cut(s)	49, 286, 688, 935, 1197
MboII	GAAGA	5 cut(s)	167, 205, 962, 1125, 1128
MflI	RGATCY	1 cut(s)	688
MhlI	GDGCHC	4 cut(s)	38, 108, 270, 946
MlsI	TGGCCA	1 cut(s)	243
MluCI	AATT	7 cut(s)	439, 606, 646, 855, 894, 1046, 1251
MluNI	TGGCCA	1 cut(s)	243
MlyI	GAGTC	2 cut(s)	104, 488
MmeI	TCCRAC	2 cut(s)	27, 138
Mox20I	TGGCCA	1 cut(s)	243
Mph1103I	ATGCAT	1 cut(s)	1241
MroI	TCCGGA	1 cut(s)	973
MroNI	GCCGGC	1 cut(s)	1269
MroXI	GAANNNNTTC	1 cut(s)	855
MscI	TGGCCA	1 cut(s)	243
MseI	TTAA	6 cut(s)	381, 605, 918, 1250, 1275, 1334
Msp20I	TGGCCA	1 cut(s)	243
MspA1I	CMGCKG	1 cut(s)	29
MspI	CCGG	3 cut(s)	92, 974, 1270
MspR9I	CCNGG	1 cut(s)	706
Mva1269I	GAATGC	1 cut(s)	139
MvaI	CCWGG	1 cut(s)	706
MvnI	CGCG	2 cut(s)	29, 131
MwoI	GCNNNNNNNGC	4 cut(s)	455, 527, 773, 842
NaeI	GCCGGC	1 cut(s)	1271
NdeII	GATC	5 cut(s)	49, 286, 688, 935, 1197
NgoMIV	GCCGGC	1 cut(s)	1269
NlaIII	CATG	3 cut(s)	403, 434, 1267
NlaIV	GGNNCC	6 cut(s)	78, 121, 321, 465, 504, 582
NmeAIII	GCCGAG	2 cut(s)	438, 802
NmuCI	GTSAC	5 cut(s)	308, 355, 416, 562, 1151
NsbI	TGCGCA	1 cut(s)	531
NsiI	ATGCAT	1 cut(s)	1241
NspI	RCATGY	1 cut(s)	1267
PaeR7I	CTCGAG	1 cut(s)	65
PceI	AGGCCT	1 cut(s)	199
PciI	ACATGT	1 cut(s)	1263
PctI	GAATGC	1 cut(s)	139
PdiI	GCCGGC	1 cut(s)	1271
PdmI	GAANNNNTTC	1 cut(s)	855
PfeI	GAWTC	5 cut(s)	661, 677, 862, 986, 1066
PkrI	GCNGC	4 cut(s)	28, 88, 844, 847
PleI	GAGTC	2 cut(s)	104, 487
PpsI	GAGTC	2 cut(s)	104, 487
PpuMI	RGGWCCY	1 cut(s)	319
PscI	ACATGT	1 cut(s)	1263
PshAI	GACNNNNGTC	1 cut(s)	1149
Psp124BI	GAGCTC	1 cut(s)	108
Psp5II	RGGWCCY	1 cut(s)	319
Psp6I	CCWGG	1 cut(s)	704
PspGI	CCWGG	1 cut(s)	704
PspN4I	GGNNCC	6 cut(s)	78, 121, 321, 465, 504, 582
PspPI	GGNCC	3 cut(s)	119, 319, 1144
PspPPI	RGGWCCY	1 cut(s)	319
PspXI	VCTCGAGB	1 cut(s)	65
PstI	CTGCAG	1 cut(s)	930
PstNI	CAGNNNCTG	1 cut(s)	143
PsuI	RGATCY	1 cut(s)	688
RsaI	GTAC	1 cut(s)	635
RsaNI	GTAC	1 cut(s)	634
SacI	GAGCTC	1 cut(s)	108
SacII	CCGCGG	1 cut(s)	30
SaqAI	TTAA	6 cut(s)	381, 605, 918, 1250, 1275, 1334
SatI	GCNGC	4 cut(s)	27, 87, 843, 846
Sau3AI	GATC	5 cut(s)	49, 286, 688, 935, 1197
Sau96I	GGNCC	3 cut(s)	119, 319, 1144
SchI	GAGTC	2 cut(s)	104, 488
ScrFI	CCNGG	1 cut(s)	706
SduI	GDGCHC	4 cut(s)	38, 108, 270, 946
SfaNI	GCATC	5 cut(s)	508, 673, 775, 957, 1226
SfcI	CTRYAG	2 cut(s)	389, 926
Sfr274I	CTCGAG	1 cut(s)	65
Sfr303I	CCGCGG	1 cut(s)	30
SgrBI	CCGCGG	1 cut(s)	30
SinI	GGWCC	3 cut(s)	119, 319, 1144
SlaI	CTCGAG	1 cut(s)	65
SmlI	CTYRAG	2 cut(s)	65, 471
SmoI	CTYRAG	2 cut(s)	65, 471
Sse9I	AATT	7 cut(s)	439, 606, 646, 855, 894, 1046, 1251
SseBI	AGGCCT	1 cut(s)	199
SsiI	CCGC	6 cut(s)	5, 27, 29, 306, 449, 1107
SspMI	CTAG	2 cut(s)	231, 813
SstI	GAGCTC	1 cut(s)	108
StuI	AGGCCT	1 cut(s)	199
StyD4I	CCNGG	1 cut(s)	704
TaaI	ACNGT	6 cut(s)	119, 562, 633, 1003, 1126, 1157
TaiI	ACGT	1 cut(s)	1211
TaqI	TCGA	3 cut(s)	66, 108, 162
TaqII	GACCGA	1 cut(s)	374
TasI	AATT	7 cut(s)	439, 606, 646, 855, 894, 1046, 1251
TauI	GCSGC	1 cut(s)	29
TfiI	GAWTC	5 cut(s)	661, 677, 862, 986, 1066
Tru1I	TTAA	6 cut(s)	381, 605, 918, 1250, 1275, 1334
Tru9I	TTAA	6 cut(s)	381, 605, 918, 1250, 1275, 1334
TscAI	CASTG	4 cut(s)	360, 717, 837, 1160
TseFI	GTSAC	5 cut(s)	308, 355, 416, 562, 1151
TseI	GCWGC	3 cut(s)	86, 842, 845
Tsp45I	GTSAC	5 cut(s)	308, 355, 416, 562, 1151
TspDTI	ATGAA	5 cut(s)	399, 416, 999, 1079, 1128
TspGWI	ACGGA	1 cut(s)	237
TspRI	CASTG	4 cut(s)	360, 717, 837, 1160
VpaK11BI	GGWCC	3 cut(s)	119, 319, 1144
XagI	CCTNNNNNAGG	1 cut(s)	510
XapI	RAATTY	2 cut(s)	439, 855
XceI	RCATGY	1 cut(s)	1267
XhoI	CTCGAG	1 cut(s)	65
XmnI	GAANNNNTTC	1 cut(s)	855
XspI	CTAG	2 cut(s)	231, 813
Zsp2I	ATGCAT	1 cut(s)	1241

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.