Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr8

Orthogroup ID

OG0008397

Physical Location & Seq

Genomic Coordinates Forward (+)

7281278 .. 7286725

Gene Structure 5448 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom08g09010.7

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2475 bp

ATGGCCCGTTGGCCCAATAAGGGACCCACTCCATGTAAGCCTTTAAACCCTCTCATCACTCACACGCTGTCGTGTCCGTTCAGATTAACTCCCTCCATATCTCCCACACGCTCAAAACTCCAACTCTCAACCCTAGATTCGCCAAAACCCACCGACCTAATCGAGTGCTCTATGGCGGAGGAGGAGGTTGTGGTTGCCGTGGAAAGCCCTAGGCCGTCGGATCATAAGCGGAAGCTCGAGGATTTGGAGCCTAAAGCAGCACCGGAAATAGTTGAGCTCGACTCCGACGGGCCGGATGATGCGAATGCGGAGCCTGGATGCGCTGAAGAAGTTGATGTGCCGCCTTCAGATGAATCGGAGGCGAAGAAGCCTCGTCTTGATGACAAGCCCCACGGAATAGCTAGTGAGAATGGCCACCAAGAGGAGGAGGTAGATGAGCCCGAAAAAGAGAATGAGGATCAACCAAATGTTGATAGCGGTGACCCAGAGGTCCCCCAGCCTACATCTGTGGAAGTTACTGAAGCAGTGACCGACGAGCAAAAGTCTGAAGTTAACGAACAACATAATGACATGAATGGTGAGCCGAGCGACACCCAGCAGCCTGCTGAGAATTCTGTGGCGGAAAAAGCTGAGGAACCCCCTCAAGGGGAGTCTCAACCACACTACGCGGAGGAACCACAGCAAGGTGGAGCTTACTTTGTGCAACAAGAGCAGCCTTCTGCAAATGAGATTTTGACACACAAAATGGAGGTTCCTAATAATAAGGTTGGGGTTTTAATTGGAAAGTCGGGGGATACTATACGGTACTTGCAATACAATTCTGGAGCAAAGATTCAAATCACAAGGGATTCCGATGCAGACCCATATTCTGCAACCAGGCCTGTGGAGATAATAGGAACTTTGGATAGTATAAGCAAGGCAGAGAAACTGATTAATGCCGTTATTGCAGAGGCTGATGCAGGGGGTTCTCCTTCTTTGGTTGCTAGAGGTGTTGCTACTGCACAGGCTGTTGCAGCTGCAGAACAAATTCAGATTCAAGTTCCGAATGAGAAGGTCGGTTTGATAATTGGCAGAGGTGGGGAGACCATTAAAGGTCTGCAGACCACATCAGGGGCACGCATCCAGGTATTGATACCCCAACATCTTCCGGAGGGGGATGAATCTAAAGAAAGGACCGTCCGAGTTACTGGTGATAAGAAGCAGATTGAAGTTGCTAAAGAATTGATAAAGGAGGTTATGAATCAGACTGTGAGGCCATCACCTCTCTCCAGTGGTTTTAATCATCAGGGTTATCGTCCCCATGGACCAGGTGGTCCTCAATGGGGTCCGCGAGGACCTCATCTACCTCAGCCATATTCGTATGATTATCCGCAACGAGGACCTTATCCATCCCATAATCCTCAGTACCCTCCTGTGTATGGGGGTTATCCTCAACATATGGGTCCAAGAAGTGGCTATGGTTCTGGTTGGGGGCAAAGGCCACCTTCCAGCATGCCACATGGTGGTGGTTATGATTACTATGGTGGACAAGGAGCAGATGCCCCAGTATCTGCCCAACATTCTGCTCCCGTTCCTTCTCATGCACCTGGACCATCTCCTAACCCTGCAATGGGTGCACCCTCCCAAGCAAATTACAATTATGGTCATCCGGCAACTTATTCCCAGGCTGCACCTCCTCAGCATAACTATGGGCATGGATACGAAGAACCAAAATATGATAATCATGCTCCAATGCAGTATCCCTACGGAGGACAAGCACCTTCTCAGCAATATCCACAAACTGGAGCTCATCCAGGTTATGGTCCACAGCAGACTTACAGCAAGCCACCACCTTATGGCATGCCATCACAAGCTCCAAATCCTCAGTCTTATGGCCCTCCTAGGGCTAGTCAACCTGGAGACGCGGTTTATCAGGGTTCTGCACCACCTCATTCATATGGTCCAAATGTCCCGGCTCAACAGCCATATCCATATGCATCCAGTGGACCTGCTCAGCAGACCTATCCTGCGTATGGTTCTGCACCAGCTGCTGATGGGTACAGTCAGCCACCACCCGCTTCTGGCTCGGGTTATCCACAACAAGGAGGACAACCTGTTAGTTATGGTCAGCCTGGTGCACAGCAGGCACCTGGCTATGGACAGGCAGCTCCTACTGCAGGGTACGCACAATACCCATCTTCTCAGCAAGGTTACGCTGAGCAGGCTGCTCCAAACGCAGCAGGTTATGGGTACCAGGGGTCTCAAGACCCTGGATATGGAGGAGCCTCTGCAGGAGCATATGGTGCACCAGCAGCTGCGCAGCCAGGTTATGCACAACCAGCAGCTCAACAAACTTATGATCAGTCGATCCCCCAGTCTGCCGGTTATGGAGCTGCACCACCAGCTGCATCAGCTGGTTATGGAAAGACGGTGTCCCCCCAGCCTGGTTATCCCCAGTATGACTCGAGCCAAATGTATGCTGCTGCACCTCGCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000976 GO:0000977 GO:0000978 GO:0000981 GO:0000982 GO:0000987 GO:0001012 GO:0001067 GO:0001077 GO:0001228 GO:0003674 GO:0003676 GO:0003677 GO:0003690 GO:0003700 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0006139 GO:0006351 GO:0006355 GO:0006357 GO:0006366 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009889 GO:0009891 GO:0009893 GO:0009987 GO:0010467 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010628 GO:0016070 GO:0018130 GO:0019219 GO:0019222 GO:0019438 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0032774 GO:0034641 GO:0034645 GO:0034654 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043565 GO:0044212 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044271 GO:0044424 GO:0044464 GO:0045893 GO:0045935 GO:0045944 GO:0046483 GO:0048518 GO:0048522 GO:0050789 GO:0050794 GO:0051171 GO:0051173 GO:0051252 GO:0051254 GO:0060255 GO:0065007 GO:0071704 GO:0080090 GO:0090304 GO:0097159 GO:0097659 GO:0140110 GO:1901360 GO:1901362 GO:1901363 GO:1901576 GO:1902680 GO:1903506 GO:1903508 GO:1990837 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

KH_1

Protein Analysis

825

Amino Acids

87.09

Weight (kDa)

4.9

Isoelectric Point (pI)

61.56

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0008397)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G33680 AT4G10070
fragaria_vesca	FvH4_2g35080 FvH4_2g35080 FvH4_2g35080
malus_domestica	MD08G1108100.v1.1 MD15G1088600.v1.1 MD15G1088800.v1.1
prunus_persica	Prupe.1G442700_v2.0.a1
pyrus_communis	pycom08g09010 pycom15g08310
rosa_chinensis	RchiOBHm_Chr6g0306891
rosa_laevigata	RLG00000010757
rosa_multiflora	Rmu_co8448611.1_g000001 Rmu_co8474845.1_g000001 Rmu_sc0018770.1_g000003
rosa_roxburghii	Rroxscaffold_7G00161380
rosa_rugosa	Rorug06G0354100
rosa_samantha	Rh6AG465700 Rh6BG435100 Rh6CG480200 Rh6DG467100
rosa_wichuraiana	Rw6G040590

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	2 cut(s)	488, 1311
Acc16I	TGCGCA	1 cut(s)	2298
Acc36I	ACCTGC	2 cut(s)	1996, 2210
Acc65I	GGTACC	1 cut(s)	2229
AccB1I	GGYRCC	2 cut(s)	2125, 2229
AccB7I	CCANNNNNTGG	5 cut(s)	1451, 1502, 1781, 1799, 1835
AccII	CGCG	3 cut(s)	668, 1330, 1904
AccIII	TCCGGA	1 cut(s)	1147
AclWI	GGATC	3 cut(s)	228, 465, 2341
AcoI	YGGCCR	1 cut(s)	412
AcsI	RAATTY	2 cut(s)	610, 1026
AcuI	CTGAAG	4 cut(s)	330, 345, 540, 567
AdeI	CACNNNGTG	1 cut(s)	1502
AfaI	GTAC	5 cut(s)	806, 1406, 2039, 2162, 2231
AgsI	TTSAA	3 cut(s)	836, 1037, 1208
Alw21I	GWGCWC	6 cut(s)	170, 279, 1618, 1789, 2119, 2287
Alw26I	GTCTC	4 cut(s)	657, 1076, 1893, 2244
Alw44I	GTGCAC	3 cut(s)	1614, 2115, 2283
AlwI	GGATC	3 cut(s)	228, 465, 2341
AlwNI	CAGNNNCTG	4 cut(s)	953, 1550, 2030, 2294
Ama87I	CYCGRG	3 cut(s)	236, 2065, 2443
Aor13HI	TCCGGA	1 cut(s)	1147
AoxI	GGCC	9 cut(s)	3, 11, 212, 290, 412, 878, 1253, 1478, 1873
ApaLI	GTGCAC	3 cut(s)	1614, 2115, 2283
ApoI	RAATTY	2 cut(s)	610, 1026
ArsI	GACNNNNNNTTYG	2 cut(s)	1850, 1882
AseI	ATTAAT	1 cut(s)	933
Asp700I	GAANNNNTTC	1 cut(s)	1026
Asp718I	GGTACC	1 cut(s)	2229
AspA2I	CCTAGG	2 cut(s)	209, 1880
AspLEI	GCGC	2 cut(s)	323, 2299
AsuC2I	CCSGG	1 cut(s)	1952
AsuHPI	GGTGA	4 cut(s)	491, 590, 1202, 1251
AvaI	CYCGRG	3 cut(s)	236, 2065, 2443
AvrII	CCTAGG	2 cut(s)	209, 1880
BaeGI	GKGCMC	4 cut(s)	1117, 1618, 2119, 2287
BalI	TGGCCA	1 cut(s)	414
BanI	GGYRCC	2 cut(s)	2125, 2229
BanII	GRGCYC	3 cut(s)	279, 441, 1789
Bbv12I	GWGCWC	6 cut(s)	170, 279, 1618, 1789, 2119, 2287
BbvCI	CCTCAGC	3 cut(s)	630, 1347, 1677
BccI	CCATC	6 cut(s)	1264, 1396, 1600, 1852, 2027, 2182
BceAI	ACGGC	3 cut(s)	182, 199, 923
BciVI	GTATCC	3 cut(s)	787, 1691, 1749
BclI	TGATCA	1 cut(s)	2338
BcnI	CCSGG	1 cut(s)	1952
BcoDI	GTCTC	4 cut(s)	657, 1076, 1893, 2244
BfaI	CTAG	6 cut(s)	134, 210, 402, 984, 1881, 1887
BfmI	CTRYAG	4 cut(s)	1017, 1097, 2154, 2268
BfuAI	ACCTGC	2 cut(s)	1996, 2210
BfuI	GTATCC	3 cut(s)	787, 1691, 1749
BlnI	CCTAGG	2 cut(s)	209, 1880
BlpI	GCTNAGC	2 cut(s)	1992, 2196
BmeT110I	CYCGRG	3 cut(s)	236, 2065, 2443
BmrI	ACTGGG	3 cut(s)	1538, 2347, 2428
BmsI	GCATC	8 cut(s)	289, 308, 844, 946, 1128, 1528, 1985, 2396
BmuI	ACTGGG	3 cut(s)	1538, 2347, 2428
BplI	GAGNNNNNCTC	2 cut(s)	266, 298
BpmI	CTGGAG	4 cut(s)	843, 1252, 1803, 1917
Bpu10I	CCTNAGC	3 cut(s)	630, 1347, 1677
Bpu1102I	GCTNAGC	2 cut(s)	1992, 2196
BpuEI	CTTGAG	2 cut(s)	627, 2226
BpuMI	CCSGG	1 cut(s)	1952
BsaBI	GATNNNNATC	1 cut(s)	836
BsaI	GGTCTC	2 cut(s)	1076, 2244
BsaJI	CCNNGG	8 cut(s)	198, 209, 391, 1300, 1662, 1880, 2233, 2248
BsaWI	WCCGGW	2 cut(s)	262, 1147
BsaXI	ACNNNNNCTCC	2 cut(s)	1890, 1920
Bse118I	RCCGGY	1 cut(s)	2360
Bse1I	ACTGG	7 cut(s)	1192, 1269, 1544, 1786, 1980, 2353, 2434
Bse3DI	GCAATG	1 cut(s)	1614
Bse8I	GATNNNNATC	1 cut(s)	836
BseAI	TCCGGA	1 cut(s)	1147
BseDI	CCNNGG	8 cut(s)	198, 209, 391, 1300, 1662, 1880, 2233, 2248
BseGI	GGATG	8 cut(s)	301, 323, 1119, 1162, 1388, 1645, 1789, 1976
BseJI	GATNNNNATC	1 cut(s)	836
BseMI	GCAATG	1 cut(s)	1614
BseNI	ACTGG	7 cut(s)	1192, 1269, 1544, 1786, 1980, 2353, 2434
BseRI	GAGGAG	6 cut(s)	194, 197, 437, 440, 1665, 2274
BseSI	GKGCMC	4 cut(s)	1117, 1618, 2119, 2287
BseYI	CCCAGC	3 cut(s)	495, 594, 2418
BsgI	GTGCAG	6 cut(s)	984, 1653, 1905, 2004, 2358, 2448
Bsh1236I	CGCG	3 cut(s)	668, 1330, 1904
BshFI	GGCC	9 cut(s)	5, 13, 214, 292, 414, 880, 1255, 1480, 1875
BshNI	GGYRCC	2 cut(s)	2125, 2229
BsiHKAI	GWGCWC	6 cut(s)	170, 279, 1618, 1789, 2119, 2287
BsiHKCI	CYCGRG	3 cut(s)	236, 2065, 2443
BsiSI	CCGG	6 cut(s)	263, 293, 1148, 1649, 1952, 2361
BslFI	GGGAC	5 cut(s)	36, 476, 1281, 1934, 2398
BsmAI	GTCTC	4 cut(s)	657, 1076, 1893, 2244
BsmBI	CGTCTC	1 cut(s)	1893
BsmFI	GGGAC	5 cut(s)	36, 476, 1281, 1934, 2398
BsmI	GAATGC	1 cut(s)	310
BsnI	GGCC	9 cut(s)	5, 13, 214, 292, 414, 880, 1255, 1480, 1875
Bso31I	GGTCTC	2 cut(s)	1076, 2244
BsoBI	CYCGRG	3 cut(s)	236, 2065, 2443
Bsp1286I	GDGCHC	8 cut(s)	170, 279, 441, 1117, 1618, 1789, 2119, 2287
Bsp13I	TCCGGA	1 cut(s)	1147
Bsp143I	GATC	4 cut(s)	220, 457, 2338, 2346
Bsp1720I	GCTNAGC	2 cut(s)	1992, 2196
Bsp19I	CCATGG	1 cut(s)	1300
BspANI	GGCC	9 cut(s)	5, 13, 214, 292, 414, 880, 1255, 1480, 1875
BspEI	TCCGGA	1 cut(s)	1147
BspFNI	CGCG	3 cut(s)	668, 1330, 1904
BspMAI	CTGCAG	4 cut(s)	1021, 1101, 2158, 2272
BspMI	ACCTGC	2 cut(s)	1996, 2210
BspPI	GGATC	3 cut(s)	228, 465, 2341
BspT107I	GGYRCC	2 cut(s)	2125, 2229
BspTNI	GGTCTC	2 cut(s)	1076, 2244
BsrDI	GCAATG	1 cut(s)	1614
BsrFI	RCCGGY	1 cut(s)	2360
BsrI	ACTGG	7 cut(s)	1192, 1269, 1544, 1786, 1980, 2353, 2434
BssAI	RCCGGY	1 cut(s)	2360
BssECI	CCNNGG	8 cut(s)	198, 209, 391, 1300, 1662, 1880, 2233, 2248
BssMI	GATC	4 cut(s)	220, 457, 2338, 2346
BssT1I	CCWWGG	3 cut(s)	209, 1300, 1880
Bst4CI	ACNGT	5 cut(s)	804, 1177, 1249, 2042, 2410
BstAPI	GCANNNNNTGC	3 cut(s)	1613, 2027, 2282
BstC8I	GCNNGC	7 cut(s)	603, 1117, 1493, 1823, 1841, 2124, 2202
BstDSI	CCRYGG	3 cut(s)	198, 391, 1300
BstEII	GGTNACC	1 cut(s)	479
BstENI	CCTNNNNNAGG	1 cut(s)	2154
BstF5I	GGATG	8 cut(s)	301, 323, 1119, 1162, 1388, 1645, 1789, 1976
BstFNI	CGCG	3 cut(s)	668, 1330, 1904
BstHHI	GCGC	2 cut(s)	323, 2299
BstKTI	GATC	4 cut(s)	223, 460, 2341, 2349
BstMAI	GTCTC	4 cut(s)	657, 1076, 1893, 2244
BstMBI	GATC	4 cut(s)	220, 457, 2338, 2346
BstNSI	RCATGY	2 cut(s)	1495, 1843
BstPI	GGTNACC	1 cut(s)	479
BstSFI	CTRYAG	4 cut(s)	1017, 1097, 2154, 2268
BstSLI	GKGCMC	4 cut(s)	1117, 1618, 2119, 2287
BstUI	CGCG	3 cut(s)	668, 1330, 1904
BstXI	CCANNNNNNTGG	1 cut(s)	883
BsuI	GTATCC	3 cut(s)	787, 1691, 1749
BsuRI	GGCC	9 cut(s)	5, 13, 214, 292, 414, 880, 1255, 1480, 1875
BtgI	CCRYGG	3 cut(s)	198, 391, 1300
BtsCI	GGATG	8 cut(s)	301, 323, 1119, 1162, 1388, 1645, 1789, 1976
BtsI	GCAGTG	1 cut(s)	531
BtsIMutI	CAGTG	3 cut(s)	531, 1276, 1987
BveI	ACCTGC	2 cut(s)	1996, 2210
Cac8I	GCNNGC	7 cut(s)	603, 1117, 1493, 1823, 1841, 2124, 2202
CaiI	CAGNNNCTG	4 cut(s)	953, 1550, 2030, 2294
CfoI	GCGC	2 cut(s)	323, 2299
Cfr10I	RCCGGY	1 cut(s)	2360
CseI	GACGC	1 cut(s)	1910
CsiI	ACCWGGT	1 cut(s)	1306
Csp6I	GTAC	5 cut(s)	805, 1405, 2038, 2161, 2230
CviAII	CATG	9 cut(s)	33, 571, 1301, 1492, 1499, 1580, 1694, 1724, 1840
CviQI	GTAC	5 cut(s)	805, 1405, 2038, 2161, 2230
DpnI	GATC	4 cut(s)	222, 459, 2340, 2348
DpnII	GATC	4 cut(s)	220, 457, 2338, 2346
DraI	TTTAAA	1 cut(s)	45
DraIII	CACNNNGTG	1 cut(s)	1502
DrdI	GACNNNNNNGTC	2 cut(s)	488, 1311
DseDI	GACNNNNNNGTC	2 cut(s)	488, 1311
EaeI	YGGCCR	1 cut(s)	412
EciI	GGCGGA	2 cut(s)	191, 635
Ecl136II	GAGCTC	2 cut(s)	277, 1787
Eco130I	CCWWGG	3 cut(s)	209, 1300, 1880
Eco147I	AGGCCT	1 cut(s)	880
Eco24I	GRGCYC	3 cut(s)	279, 441, 1789
Eco31I	GGTCTC	2 cut(s)	1076, 2244
Eco53kI	GAGCTC	2 cut(s)	277, 1787
Eco57I	CTGAAG	4 cut(s)	330, 345, 540, 567
Eco88I	CYCGRG	3 cut(s)	236, 2065, 2443
Eco91I	GGTNACC	1 cut(s)	479
EcoICRI	GAGCTC	2 cut(s)	277, 1787
EcoNI	CCTNNNNNAGG	1 cut(s)	2154
EcoO109I	RGGNCCY	4 cut(s)	23, 490, 1334, 1379
EcoO65I	GGTNACC	1 cut(s)	479
EcoRI	GAATTC	1 cut(s)	610
EcoT14I	CCWWGG	3 cut(s)	209, 1300, 1880
EcoT22I	ATGCAT	1 cut(s)	1978
EcoT38I	GRGCYC	3 cut(s)	279, 441, 1789
ErhI	CCWWGG	3 cut(s)	209, 1300, 1880
Esp3I	CGTCTC	1 cut(s)	1893
FaeI	CATG	9 cut(s)	36, 574, 1304, 1495, 1502, 1583, 1697, 1727, 1843
FalI	AAGNNNNNCTT	2 cut(s)	1468, 1500
FaqI	GGGAC	5 cut(s)	36, 476, 1281, 1934, 2398
FatI	CATG	9 cut(s)	32, 570, 1300, 1491, 1498, 1579, 1693, 1723, 1839
FauI	CCCGC	1 cut(s)	2062
FauNDI	CATATG	4 cut(s)	1437, 1936, 1972, 2278
FbaI	TGATCA	1 cut(s)	2338
FokI	GGATG	8 cut(s)	308, 330, 1106, 1169, 1375, 1632, 1776, 1963
FriOI	GRGCYC	3 cut(s)	279, 441, 1789
FspBI	CTAG	6 cut(s)	134, 210, 402, 984, 1881, 1887
FspI	TGCGCA	1 cut(s)	2298
GlaI	GCGC	2 cut(s)	322, 2298
GsaI	CCCAGC	3 cut(s)	499, 598, 2422
GsuI	CTGGAG	4 cut(s)	843, 1252, 1803, 1917
HaeIII	GGCC	9 cut(s)	5, 13, 214, 292, 414, 880, 1255, 1480, 1875
HapII	CCGG	6 cut(s)	263, 293, 1148, 1649, 1952, 2361
HgaI	GACGC	1 cut(s)	1910
HhaI	GCGC	2 cut(s)	323, 2299
Hin1II	CATG	9 cut(s)	36, 574, 1304, 1495, 1502, 1583, 1697, 1727, 1843
Hin6I	GCGC	2 cut(s)	321, 2297
HinP1I	GCGC	2 cut(s)	321, 2297
HincII	GTYRAC	2 cut(s)	553, 1892
HindII	GTYRAC	2 cut(s)	553, 1892
HpaI	GTTAAC	1 cut(s)	553
HpaII	CCGG	6 cut(s)	263, 293, 1148, 1649, 1952, 2361
HphI	GGTGA	4 cut(s)	491, 590, 1202, 1251
Hpy166II	GTNNAC	8 cut(s)	553, 1526, 1616, 1805, 1892, 1985, 2117, 2285
Hpy188III	TCNNGA	4 cut(s)	377, 822, 1148, 2243
Hpy8I	GTNNAC	8 cut(s)	553, 1526, 1616, 1805, 1892, 1985, 2117, 2285
Hpy99I	CGWCG	3 cut(s)	220, 290, 536
HpyAV	CCTTC	7 cut(s)	354, 726, 981, 1045, 1494, 1584, 1770
HpyCH4III	ACNGT	5 cut(s)	804, 1177, 1249, 2042, 2410
Hsp92II	CATG	9 cut(s)	36, 574, 1304, 1495, 1502, 1583, 1697, 1727, 1843
HspAI	GCGC	2 cut(s)	321, 2297
KflI	GGGWCCC	1 cut(s)	23
Kpn2I	TCCGGA	1 cut(s)	1147
KpnI	GGTACC	1 cut(s)	2233
Ksp22I	TGATCA	1 cut(s)	2338
KspAI	GTTAAC	1 cut(s)	553
Kzo9I	GATC	4 cut(s)	220, 457, 2338, 2346
LweI	GCATC	8 cut(s)	289, 308, 844, 946, 1128, 1528, 1985, 2396
MabI	ACCWGGT	1 cut(s)	1306
MaeI	CTAG	6 cut(s)	134, 210, 402, 984, 1881, 1887
MaeIII	GTNAC	5 cut(s)	479, 514, 526, 1183, 2189
MalI	GATC	4 cut(s)	222, 459, 2340, 2348
MboI	GATC	4 cut(s)	220, 457, 2338, 2346
MboII	GAAGA	5 cut(s)	338, 376, 1136, 1715, 2169
MhlI	GDGCHC	8 cut(s)	170, 279, 441, 1117, 1618, 1789, 2119, 2287
MlsI	TGGCCA	1 cut(s)	414
MluCI	AATT	8 cut(s)	610, 777, 817, 1026, 1065, 1220, 1630, 1636
MluNI	TGGCCA	1 cut(s)	414
MlyI	GAGTC	3 cut(s)	275, 659, 2435
MmeI	TCCRAC	3 cut(s)	145, 198, 309
Mox20I	TGGCCA	1 cut(s)	414
Mph1103I	ATGCAT	1 cut(s)	1978
MroI	TCCGGA	1 cut(s)	1147
MroXI	GAANNNNTTC	1 cut(s)	1026
MscI	TGGCCA	1 cut(s)	414
MseI	TTAA	7 cut(s)	44, 86, 552, 776, 933, 1089, 1278
MslI	CAYNNNNRTG	3 cut(s)	1503, 1686, 1935
Msp20I	TGGCCA	1 cut(s)	414
MspA1I	CMGCKG	5 cut(s)	1016, 2027, 2294, 2384, 2393
MspI	CCGG	6 cut(s)	263, 293, 1148, 1649, 1952, 2361
Mva1269I	GAATGC	1 cut(s)	310
MvnI	CGCG	3 cut(s)	668, 1330, 1904
NciI	CCSGG	1 cut(s)	1952
NcoI	CCATGG	1 cut(s)	1300
NdeI	CATATG	4 cut(s)	1437, 1936, 1972, 2278
NdeII	GATC	4 cut(s)	220, 457, 2338, 2346
NlaIII	CATG	9 cut(s)	36, 574, 1304, 1495, 1502, 1583, 1697, 1727, 1843
NmeAIII	GCCGAG	1 cut(s)	609
NmuCI	GTSAC	2 cut(s)	479, 526
NsbI	TGCGCA	1 cut(s)	2298
NsiI	ATGCAT	1 cut(s)	1978
NspI	RCATGY	2 cut(s)	1495, 1843
PaeI	GCATGC	2 cut(s)	1495, 1843
PaeR7I	CTCGAG	2 cut(s)	236, 2443
PceI	AGGCCT	1 cut(s)	880
PctI	GAATGC	1 cut(s)	310
PdmI	GAANNNNTTC	1 cut(s)	1026
PfeI	GAWTC	7 cut(s)	137, 353, 832, 848, 1033, 1160, 1240
PflFI	GACNNNGTC	1 cut(s)	2410
PflMI	CCANNNNNTGG	5 cut(s)	1451, 1502, 1781, 1799, 1835
PleI	GAGTC	3 cut(s)	275, 658, 2435
PpsI	GAGTC	3 cut(s)	275, 658, 2435
PpuMI	RGGWCCY	4 cut(s)	23, 490, 1334, 1379
PshBI	ATTAAT	1 cut(s)	933
Psp124BI	GAGCTC	2 cut(s)	279, 1789
Psp5II	RGGWCCY	4 cut(s)	23, 490, 1334, 1379
PspEI	GGTNACC	1 cut(s)	479
PspFI	CCCAGC	3 cut(s)	495, 594, 2418
PspPPI	RGGWCCY	4 cut(s)	23, 490, 1334, 1379
PspXI	VCTCGAGB	2 cut(s)	236, 2443
PstI	CTGCAG	4 cut(s)	1021, 1101, 2158, 2272
PstNI	CAGNNNCTG	4 cut(s)	953, 1550, 2030, 2294
PsyI	GACNNNGTC	1 cut(s)	2410
PvuII	CAGCTG	5 cut(s)	1016, 2027, 2294, 2384, 2393
RsaI	GTAC	5 cut(s)	806, 1406, 2039, 2162, 2231
RsaNI	GTAC	5 cut(s)	805, 1405, 2038, 2161, 2230
RseI	CAYNNNNRTG	3 cut(s)	1503, 1686, 1935
SacI	GAGCTC	2 cut(s)	279, 1789
SaqAI	TTAA	7 cut(s)	44, 86, 552, 776, 933, 1089, 1278
Sau3AI	GATC	4 cut(s)	220, 457, 2338, 2346
SchI	GAGTC	3 cut(s)	275, 659, 2435
SduI	GDGCHC	8 cut(s)	170, 279, 441, 1117, 1618, 1789, 2119, 2287
SexAI	ACCWGGT	1 cut(s)	1306
SfaNI	GCATC	8 cut(s)	289, 308, 844, 946, 1128, 1528, 1985, 2396
SfcI	CTRYAG	4 cut(s)	1017, 1097, 2154, 2268
Sfr274I	CTCGAG	2 cut(s)	236, 2443
SlaI	CTCGAG	2 cut(s)	236, 2443
SmiMI	CAYNNNNRTG	3 cut(s)	1503, 1686, 1935
SmlI	CTYRAG	4 cut(s)	236, 642, 2241, 2443
SmoI	CTYRAG	4 cut(s)	236, 642, 2241, 2443
SphI	GCATGC	2 cut(s)	1495, 1843
Sse9I	AATT	8 cut(s)	610, 777, 817, 1026, 1065, 1220, 1630, 1636
SseBI	AGGCCT	1 cut(s)	880
SspMI	CTAG	6 cut(s)	134, 210, 402, 984, 1881, 1887
SstI	GAGCTC	2 cut(s)	279, 1789
StuI	AGGCCT	1 cut(s)	880
StyI	CCWWGG	3 cut(s)	209, 1300, 1880
TaaI	ACNGT	5 cut(s)	804, 1177, 1249, 2042, 2410
TaqI	TCGA	5 cut(s)	162, 237, 279, 2345, 2444
TaqII	GACCGA	1 cut(s)	545
TasI	AATT	8 cut(s)	610, 777, 817, 1026, 1065, 1220, 1630, 1636
TauI	GCSGC	1 cut(s)	343
TfiI	GAWTC	7 cut(s)	137, 353, 832, 848, 1033, 1160, 1240
Tru1I	TTAA	7 cut(s)	44, 86, 552, 776, 933, 1089, 1278
Tru9I	TTAA	7 cut(s)	44, 86, 552, 776, 933, 1089, 1278
TscAI	CASTG	3 cut(s)	531, 1276, 1987
TseFI	GTSAC	2 cut(s)	479, 526
Tsp45I	GTSAC	2 cut(s)	479, 526
TspDTI	ATGAA	5 cut(s)	366, 587, 1173, 1253, 1923
TspGWI	ACGGA	3 cut(s)	66, 408, 1761
TspRI	CASTG	3 cut(s)	531, 1276, 1987
Tth111I	GACNNNGTC	1 cut(s)	2410
Van91I	CCANNNNNTGG	5 cut(s)	1451, 1502, 1781, 1799, 1835
VneI	GTGCAC	3 cut(s)	1614, 2115, 2283
VspI	ATTAAT	1 cut(s)	933
XagI	CCTNNNNNAGG	1 cut(s)	2154
XapI	RAATTY	2 cut(s)	610, 1026
XceI	RCATGY	2 cut(s)	1495, 1843
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1307
XhoI	CTCGAG	2 cut(s)	236, 2443
XmaJI	CCTAGG	2 cut(s)	209, 1880
XmnI	GAANNNNTTC	1 cut(s)	1026
XspI	CTAG	6 cut(s)	134, 210, 402, 984, 1881, 1887
Zsp2I	ATGCAT	1 cut(s)	1978

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.