MD15G1091700.v1.1

Monoglyceride

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr15
OG0013002
Physical Location & Seq
Reverse (-)
6363670 .. 6366529
2860 bp
Loading structure...
UTR
Exon/CDS
Intron
MD15G1091700.v1.1.491

Sequence Viewer

Length: 1155 bp
ATGTCGACGGCGGAGATGGAGCAGCTGACCTCCGGAGCCAGCAACCGCATAATCCCGATCCTCAAAACCCTAAGAGCCTCCCTCCTCTTCATCCACACCTTCTTCCTCTCCCTCATCCTCTTCTTCCTTCCTCGCCGTTGCCGCCGCGGAATCTCGGAGTCTCTGCTGGATGCTCCGTCGTCTAAGAAGCGAAAGTCGGCGTGGAGGAGAGAGGAGGAGGACACCTTCAGGCGCAGAGCATTGGCTGAGGGGTATCACACCGGCGACGGCCACTGCTGGTACCGCTCCGCCACGTTCTTGTTCTTTGGTGGTCGCAACAACGCCCTCTTCTGCCGGTCATGGTTTCCGGTCTCCGGCACTCCAAGGGGTATTTTGATCATCATACACGGGCTTAATGAGCACAGTGGAAGATATGCTGATTTTGCAAGGCAACTAACCTCATGCAACTTTGGGGTGTATGCAATGGACTGGATAGGTCATGGCGGCAGCGATGGATTGCATGGATACGTTCCTTCACTTGACTATGTTGTTGCTGACACTGGTGCTTTCTTGGAGAAGATTAGGTTAGAGAACCCTGGAGTACCGTGCTTCCTCTTTGGTCACTCAACAGGAGGAGCTGTTGTCTTGAAGGCGGCAGCAGTCCCTCAAATTGAAGGAATGCTAGAGGGTATTGTACTGACATCACCAGCTTTGCGCGTTAAGCCAGCACATCCAATTGTTGGGGCTGTGGCTCCAATTGTTTCTATGGTGGCTCCCAAGTTCCAGTTTAAAGGTGCAAACAAGAGGGGAATTCCAGTGTCGAGGGATCCTGCACAATTGTTGGCCAAGTACTCCGATCCCCTGGTCTATACAGGTCCAATCAGGGTCCGAACAGGCTATGAGATATTGCGGATCTCCTCTCACTTGACGCGGAACTTTAAGTTTGTGAATATCCCCTTCTTTGTTCTTCATGGAACTGCTGATAGAGTCACCGATCCACTAGCCTCCCAGGACCTCTACAATGAGGCGGCATCCGAGTTCAAAGATATAAAGCTCTATGACGGTTTCTTGCACGACCTTCTCTTTGAGCCGGAGCGTGTGGAGATTGCACAGGATATAATTGACTGGATGGATAAGAGATTGAGTGTTGGTGTCGAGGATGTTAATGGCCTGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00561 ko01100 ko04714 ko04723 ko04923 map00561 map01100 map04714 map04723 map04923
Pfam Domains
Protein Families
Hydrolase_4

Protein Analysis

385

Amino Acids

42.76

Weight (kDa)

8.88

Isoelectric Point (pI)

40.45

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Hydrolase_4 PF12146 120 - 358 6.2e-73 Serine aminopeptidase, S33
Abhydrolase_1 PF00561 124 - 336 1.3e-13 alpha/beta hydrolase fold
Abhydrolase_6 PF12697 125 - 333 2.7e-13 Alpha/beta hydrolase family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0013002)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G11650 AT5G11650
fragaria_vesca FvH4_2g35400
malus_domestica MD08G1112500.v1.1 MD15G1091700.v1.1
prunus_persica Prupe.1G446700_v2.0.a1
pyrus_communis pycom08g09340 pycom15g08550
rosa_chinensis RchiOBHm_Chr6g0306501
rosa_laevigata RLG00000010791
rosa_multiflora Rmu_sc0002971.1_g000010
rosa_roxburghii Rroxscaffold_7G00161720
rosa_rugosa Rorug06G0350000
rosa_samantha Rh6AG462100 Rh6BG438700 Rh6CG476400 Rh6DG463100
rosa_wichuraiana Rw6G040280

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 279
AccB1I GGYRCC 1 cut(s) 279
AccB7I CCANNNNNTGG 1 cut(s) 719
AccBSI CCGCTC 1 cut(s) 285
AccI GTMKAC 1 cut(s) 5
AccII CGCG 3 cut(s) 147, 696, 910
AccIII TCCGGA 1 cut(s) 32
AclWI GGATC 6 cut(s) 52, 800, 813, 830, 899, 968
AcoI YGGCCR 2 cut(s) 268, 822
AcsI RAATTY 1 cut(s) 789
AcuI CTGAAG 1 cut(s) 211
AfaI GTAC 4 cut(s) 281, 582, 675, 830
AfiI CCNNNNNNNGG 2 cut(s) 353, 719
AgsI TTSAA 3 cut(s) 628, 653, 1021
AjnI CCWGG 3 cut(s) 574, 840, 987
AluBI AGCT 4 cut(s) 25, 617, 689, 1033
AluI AGCT 4 cut(s) 25, 617, 689, 1033
Alw21I GWGCWC 1 cut(s) 402
Alw26I GTCTC 2 cut(s) 165, 355
AlwI GGATC 6 cut(s) 52, 800, 813, 830, 899, 968
Aor13HI TCCGGA 1 cut(s) 32
AoxI GGCC 3 cut(s) 268, 822, 1147
ApeKI GCWGC 3 cut(s) 22, 486, 635
ApoI RAATTY 1 cut(s) 789
ArsI GACNNNNNNTTYG 2 cut(s) 1046, 1078
Asp718I GGTACC 1 cut(s) 279
AspLEI GCGC 2 cut(s) 234, 696
AspS9I GGNCC 3 cut(s) 854, 865, 991
AsuHPI GGTGA 2 cut(s) 675, 961
AvaII GGWCC 3 cut(s) 854, 865, 991
BalI TGGCCA 1 cut(s) 824
BamHI GGATCC 1 cut(s) 805
BanI GGYRCC 1 cut(s) 279
Bbv12I GWGCWC 1 cut(s) 402
BbvCI CCTCAGC 1 cut(s) 246
BbvI GCAGC 3 cut(s) 34, 498, 647
BccI CCATC 3 cut(s) 10, 485, 1102
BceAI ACGGC 3 cut(s) 24, 120, 283
BciT130I CCWGG 3 cut(s) 576, 842, 989
BciVI GTATCC 1 cut(s) 497
BclI TGATCA 1 cut(s) 375
BcoDI GTCTC 2 cut(s) 165, 355
BfaI CTAG 2 cut(s) 662, 980
BfuI GTATCC 1 cut(s) 497
BisI GCNGC 8 cut(s) 23, 142, 145, 484, 487, 633, 636, 1008
BlsI GCNGC 8 cut(s) 24, 143, 146, 485, 488, 634, 637, 1009
BmcAI AGTACT 1 cut(s) 830
Bme1390I CCNGG 3 cut(s) 576, 842, 989
Bme18I GGWCC 3 cut(s) 854, 865, 991
BmgT120I GGNCC 3 cut(s) 854, 865, 991
BmiI GGNNCC 6 cut(s) 37, 281, 732, 753, 807, 866
BmrFI CCNGG 3 cut(s) 576, 842, 989
BmsI GCATC 2 cut(s) 160, 1019
BplI GAGNNNNNCTC 2 cut(s) 66, 98
BpmI CTGGAG 1 cut(s) 597
Bpu10I CCTNAGC 1 cut(s) 246
BsaI GGTCTC 1 cut(s) 355
BsaJI CCNNGG 5 cut(s) 145, 362, 574, 840, 987
BsaWI WCCGGW 2 cut(s) 32, 346
BsaXI ACNNNNNCTCC 4 cut(s) 603, 606, 633, 636
Bsc4I CCNNNNNNNGG 2 cut(s) 353, 719
Bse118I RCCGGY 2 cut(s) 260, 333
Bse1I ACTGG 5 cut(s) 473, 544, 763, 794, 1109
Bse3DI GCAATG 1 cut(s) 468
BseAI TCCGGA 1 cut(s) 32
BseBI CCWGG 3 cut(s) 576, 842, 989
BseDI CCNNGG 5 cut(s) 145, 362, 574, 840, 987
BseGI GGATG 7 cut(s) 90, 114, 175, 709, 1010, 1113, 1144
BseLI CCNNNNNNNGG 2 cut(s) 353, 719
BseMI GCAATG 1 cut(s) 468
BseMII CTCAG 1 cut(s) 237
BseNI ACTGG 5 cut(s) 473, 544, 763, 794, 1109
BseRI GAGGAG 6 cut(s) 74, 220, 227, 230, 627, 886
BseXI GCAGC 3 cut(s) 34, 498, 647
BsgI GTGCAG 1 cut(s) 795
Bsh1236I CGCG 3 cut(s) 147, 696, 910
BshFI GGCC 3 cut(s) 270, 824, 1149
BshNI GGYRCC 1 cut(s) 279
BsiHKAI GWGCWC 1 cut(s) 402
BsiSI CCGG 6 cut(s) 33, 261, 334, 347, 354, 1070
BslFI GGGAC 1 cut(s) 626
BslI CCNNNNNNNGG 2 cut(s) 353, 719
BsmAI GTCTC 2 cut(s) 165, 355
BsmFI GGGAC 1 cut(s) 626
BsmI GAATGC 1 cut(s) 663
BsnI GGCC 3 cut(s) 270, 824, 1149
Bso31I GGTCTC 1 cut(s) 355
Bsp1286I GDGCHC 1 cut(s) 402
Bsp13I TCCGGA 1 cut(s) 32
Bsp143I GATC 6 cut(s) 57, 375, 805, 835, 891, 973
BspANI GGCC 3 cut(s) 270, 824, 1149
BspCNI CTCAG 1 cut(s) 238
BspEI TCCGGA 1 cut(s) 32
BspFNI CGCG 3 cut(s) 147, 696, 910
BspLI GGNNCC 6 cut(s) 37, 281, 732, 753, 807, 866
BspPI GGATC 6 cut(s) 52, 800, 813, 830, 899, 968
BspT107I GGYRCC 1 cut(s) 279
BspTNI GGTCTC 1 cut(s) 355
BsrBI CCGCTC 1 cut(s) 285
BsrDI GCAATG 1 cut(s) 468
BsrFI RCCGGY 2 cut(s) 260, 333
BsrI ACTGG 5 cut(s) 473, 544, 763, 794, 1109
BssAI RCCGGY 2 cut(s) 260, 333
BssECI CCNNGG 5 cut(s) 145, 362, 574, 840, 987
BssMI GATC 6 cut(s) 57, 375, 805, 835, 891, 973
BssT1I CCWWGG 1 cut(s) 362
Bst2UI CCWGG 3 cut(s) 576, 842, 989
Bst4CI ACNGT 3 cut(s) 404, 585, 1043
Bst6I CTCTTC 3 cut(s) 92, 125, 332
BstC8I GCNNGC 2 cut(s) 40, 705
BstDEI CTNAG 3 cut(s) 71, 183, 246
BstDSI CCRYGG 1 cut(s) 145
BstF5I GGATG 7 cut(s) 90, 114, 175, 709, 1010, 1113, 1144
BstFNI CGCG 3 cut(s) 147, 696, 910
BstHHI GCGC 2 cut(s) 234, 696
BstKTI GATC 6 cut(s) 60, 378, 808, 838, 894, 976
BstMAI GTCTC 2 cut(s) 165, 355
BstMBI GATC 6 cut(s) 57, 375, 805, 835, 891, 973
BstMWI GCNNNNNNNGC 5 cut(s) 141, 282, 397, 422, 700
BstNI CCWGG 3 cut(s) 576, 842, 989
BstSCI CCNGG 3 cut(s) 574, 840, 987
BstUI CGCG 3 cut(s) 147, 696, 910
BstV1I GCAGC 3 cut(s) 34, 498, 647
BstX2I RGATCY 2 cut(s) 805, 891
BstYI RGATCY 2 cut(s) 805, 891
BsuI GTATCC 1 cut(s) 497
BsuRI GGCC 3 cut(s) 270, 824, 1149
BtgI CCRYGG 1 cut(s) 145
BtgZI GCGATG 1 cut(s) 504
BtsCI GGATG 7 cut(s) 90, 114, 175, 709, 1010, 1113, 1144
BtsI GCAGTG 1 cut(s) 271
BtsIMutI CAGTG 4 cut(s) 271, 409, 537, 801
Cac8I GCNNGC 2 cut(s) 40, 705
CfoI GCGC 2 cut(s) 234, 696
Cfr10I RCCGGY 2 cut(s) 260, 333
Cfr13I GGNCC 3 cut(s) 854, 865, 991
Cfr42I CCGCGG 1 cut(s) 148
CseI GACGC 1 cut(s) 916
Csp6I GTAC 4 cut(s) 280, 581, 674, 829
CviAII CATG 5 cut(s) 339, 441, 479, 500, 950
CviQI GTAC 4 cut(s) 280, 581, 674, 829
DdeI CTNAG 3 cut(s) 71, 183, 246
DpnI GATC 6 cut(s) 59, 377, 807, 837, 893, 975
DpnII GATC 6 cut(s) 57, 375, 805, 835, 891, 973
DraI TTTAAA 1 cut(s) 769
EaeI YGGCCR 2 cut(s) 268, 822
Eam1104I CTCTTC 3 cut(s) 92, 125, 332
EarI CTCTTC 3 cut(s) 92, 125, 332
EciI GGCGGA 2 cut(s) 26, 277
Eco130I CCWWGG 1 cut(s) 362
Eco31I GGTCTC 1 cut(s) 355
Eco47I GGWCC 3 cut(s) 854, 865, 991
Eco57I CTGAAG 1 cut(s) 211
EcoO109I RGGNCCY 1 cut(s) 991
EcoRI GAATTC 1 cut(s) 789
EcoRII CCWGG 3 cut(s) 574, 840, 987
EcoT14I CCWWGG 1 cut(s) 362
ErhI CCWWGG 1 cut(s) 362
FaeI CATG 5 cut(s) 342, 444, 482, 503, 953
FaqI GGGAC 1 cut(s) 626
FatI CATG 5 cut(s) 338, 440, 478, 499, 949
FbaI TGATCA 1 cut(s) 375
FblI GTMKAC 1 cut(s) 5
Fnu4HI GCNGC 8 cut(s) 23, 142, 145, 484, 487, 633, 636, 1008
FokI GGATG 7 cut(s) 77, 101, 182, 696, 997, 1120, 1151
Fsp4HI GCNGC 8 cut(s) 23, 142, 145, 484, 487, 633, 636, 1008
FspBI CTAG 2 cut(s) 662, 980
GlaI GCGC 2 cut(s) 233, 695
GluI GCNGC 8 cut(s) 23, 142, 145, 484, 487, 633, 636, 1008
GsuI CTGGAG 1 cut(s) 597
HaeIII GGCC 3 cut(s) 270, 824, 1149
HapII CCGG 6 cut(s) 33, 261, 334, 347, 354, 1070
HgaI GACGC 1 cut(s) 916
HhaI GCGC 2 cut(s) 234, 696
Hin1II CATG 5 cut(s) 342, 444, 482, 503, 953
Hin6I GCGC 2 cut(s) 232, 694
HinP1I GCGC 2 cut(s) 232, 694
HincII GTYRAC 1 cut(s) 6
HindII GTYRAC 1 cut(s) 6
HinfI GANTC 3 cut(s) 150, 158, 966
HpaII CCGG 6 cut(s) 33, 261, 334, 347, 354, 1070
HphI GGTGA 2 cut(s) 675, 961
Hpy166II GTNNAC 1 cut(s) 6
Hpy188I TCNGA 4 cut(s) 157, 835, 869, 1015
Hpy188III TCNNGA 3 cut(s) 33, 55, 625
Hpy8I GTNNAC 1 cut(s) 6
Hpy99I CGWCG 3 cut(s) 10, 181, 269
HpyAV CCTTC 8 cut(s) 109, 137, 235, 522, 622, 647, 946, 1067
HpyCH4III ACNGT 3 cut(s) 404, 585, 1043
HpyCH4IV ACGT 2 cut(s) 293, 507
HpyCH4V TGCA 8 cut(s) 425, 444, 461, 499, 776, 812, 1051, 1088
HpyF10VI GCNNNNNNNGC 5 cut(s) 141, 282, 397, 422, 700
HpyF3I CTNAG 3 cut(s) 71, 183, 246
HpySE526I ACGT 2 cut(s) 293, 507
Hsp92II CATG 5 cut(s) 342, 444, 482, 503, 953
HspAI GCGC 2 cut(s) 232, 694
Kpn2I TCCGGA 1 cut(s) 32
KpnI GGTACC 1 cut(s) 283
Ksp22I TGATCA 1 cut(s) 375
KspI CCGCGG 1 cut(s) 148
Kzo9I GATC 6 cut(s) 57, 375, 805, 835, 891, 973
LmnI GCTCC 8 cut(s) 19, 35, 178, 290, 614, 736, 757, 1072
Lsp1109I GCAGC 3 cut(s) 34, 498, 647
LweI GCATC 2 cut(s) 160, 1019
MaeI CTAG 2 cut(s) 662, 980
MaeII ACGT 2 cut(s) 293, 507
MaeIII GTNAC 2 cut(s) 599, 967
MalI GATC 6 cut(s) 59, 377, 807, 837, 893, 975
MbiI CCGCTC 1 cut(s) 285
MboI GATC 6 cut(s) 57, 375, 805, 835, 891, 973
MboII GAAGA 8 cut(s) 79, 94, 112, 115, 319, 420, 568, 938
MfeI CAATTG 3 cut(s) 714, 735, 815
MflI RGATCY 2 cut(s) 805, 891
MhlI GDGCHC 1 cut(s) 402
MlsI TGGCCA 1 cut(s) 824
MluCI AATT 6 cut(s) 648, 714, 735, 789, 815, 1098
MluNI TGGCCA 1 cut(s) 824
MlyI GAGTC 2 cut(s) 167, 975
Mox20I TGGCCA 1 cut(s) 824
MroI TCCGGA 1 cut(s) 32
MscI TGGCCA 1 cut(s) 824
MseI TTAA 5 cut(s) 393, 699, 768, 918, 1143
Msp20I TGGCCA 1 cut(s) 824
MspA1I CMGCKG 2 cut(s) 25, 147
MspI CCGG 6 cut(s) 33, 261, 334, 347, 354, 1070
MspR9I CCNGG 3 cut(s) 576, 842, 989
MunI CAATTG 3 cut(s) 714, 735, 815
Mva1269I GAATGC 1 cut(s) 663
MvaI CCWGG 3 cut(s) 576, 842, 989
MvnI CGCG 3 cut(s) 147, 696, 910
MwoI GCNNNNNNNGC 5 cut(s) 141, 282, 397, 422, 700
NdeII GATC 6 cut(s) 57, 375, 805, 835, 891, 973
NlaIII CATG 5 cut(s) 342, 444, 482, 503, 953
NlaIV GGNNCC 6 cut(s) 37, 281, 732, 753, 807, 866
NmuCI GTSAC 2 cut(s) 599, 967
PctI GAATGC 1 cut(s) 663
PfeI GAWTC 1 cut(s) 150
PflMI CCANNNNNTGG 1 cut(s) 719
PkrI GCNGC 8 cut(s) 24, 143, 146, 485, 488, 634, 637, 1009
PleI GAGTC 2 cut(s) 166, 974
PpsI GAGTC 2 cut(s) 166, 974
PpuMI RGGWCCY 1 cut(s) 991
Psp5II RGGWCCY 1 cut(s) 991
Psp6I CCWGG 3 cut(s) 574, 840, 987
PspGI CCWGG 3 cut(s) 574, 840, 987
PspN4I GGNNCC 6 cut(s) 37, 281, 732, 753, 807, 866
PspPI GGNCC 3 cut(s) 854, 865, 991
PspPPI RGGWCCY 1 cut(s) 991
PsuI RGATCY 2 cut(s) 805, 891
PvuII CAGCTG 1 cut(s) 25
RsaI GTAC 4 cut(s) 281, 582, 675, 830
RsaNI GTAC 4 cut(s) 280, 581, 674, 829
SacII CCGCGG 1 cut(s) 148
SalI GTCGAC 1 cut(s) 4
SaqAI TTAA 5 cut(s) 393, 699, 768, 918, 1143
SatI GCNGC 8 cut(s) 23, 142, 145, 484, 487, 633, 636, 1008
Sau3AI GATC 6 cut(s) 57, 375, 805, 835, 891, 973
Sau96I GGNCC 3 cut(s) 854, 865, 991
ScaI AGTACT 1 cut(s) 830
SchI GAGTC 2 cut(s) 167, 975
ScrFI CCNGG 3 cut(s) 576, 842, 989
SduI GDGCHC 1 cut(s) 402
SfaNI GCATC 2 cut(s) 160, 1019
Sfr303I CCGCGG 1 cut(s) 148
SgrAI CRCCGGYG 1 cut(s) 260
SgrBI CCGCGG 1 cut(s) 148
SinI GGWCC 3 cut(s) 854, 865, 991
Sse9I AATT 6 cut(s) 648, 714, 735, 789, 815, 1098
SspMI CTAG 2 cut(s) 662, 980
StyD4I CCNGG 3 cut(s) 574, 840, 987
StyI CCWWGG 1 cut(s) 362
TaaI ACNGT 3 cut(s) 404, 585, 1043
TaiI ACGT 2 cut(s) 296, 510
TaqI TCGA 3 cut(s) 5, 800, 1134
TasI AATT 6 cut(s) 648, 714, 735, 789, 815, 1098
TatI WGTACW 2 cut(s) 673, 828
TauI GCSGC 5 cut(s) 144, 147, 486, 635, 1010
TfiI GAWTC 1 cut(s) 150
Tru1I TTAA 5 cut(s) 393, 699, 768, 918, 1143
Tru9I TTAA 5 cut(s) 393, 699, 768, 918, 1143
TscAI CASTG 4 cut(s) 278, 409, 544, 801
TseFI GTSAC 2 cut(s) 599, 967
TseI GCWGC 3 cut(s) 22, 486, 635
Tsp45I GTSAC 2 cut(s) 599, 967
TspDTI ATGAA 2 cut(s) 79, 938
TspGWI ACGGA 1 cut(s) 165
TspRI CASTG 4 cut(s) 278, 409, 544, 801
Van91I CCANNNNNTGG 1 cut(s) 719
VpaK11BI GGWCC 3 cut(s) 854, 865, 991
XapI RAATTY 1 cut(s) 789
XmiI GTMKAC 1 cut(s) 5
XspI CTAG 2 cut(s) 662, 980
ZrmI AGTACT 1 cut(s) 830
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.