Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr15

Orthogroup ID

OG0016478

Physical Location & Seq

Genomic Coordinates Reverse (-)

6813671 .. 6817126

Gene Structure 3456 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD15G1098100.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2151 bp

ATGTCTTCGCCGCCACGGTCACTGCCTCCTGCTGCTTCTCCAGTTACCACTCCACCTCCATTGACACCGTCATTTCCTCCACTTCTGCCGCCATTGTTGCCGTCACCATTTCCACAACCGTTGATGCCGCCATTGCCACAAATAGCACCATCCTCACCCACTAGTACTCCTCCTACTCTGCCGCCTATAAACAACTCTGACCCTCCTGTTTCCTCACCACCACCGCCTCCTCTAACATCTCCGCCACCTCAGCTTCCACCATTGCCAGTTCTGTTGCCACCATCTACGGTCACTCCTCCACCAACGCCTTCAGCCACTTCTCCTCCACCACCAACACTGGTCACCTCTTCACCTCCATCGCATTCACCACCACCATCAGTAGTGACCTCTTCCCCTCCACCACCCTCGCCACCACTAACTCCACTGCCATCAACACCTTCTCTTCCGCCACTATCACCACCTTTACCACCACCACATGTTTCCCCTCCTATAATCCCATCAACCGCTCCACCACCACCTGCATTGTCAACTCCTACTCCACCCGCCCCCACCAGCCCCACCACTCAAACACCACCATTAGCGAGTCCAACCAACGATTCTCCACCACCTGCATTGCCTCCCCCATTGGCCAGCACTCTACAGCCATCTCCCTCCAACAATAACTCCATAATCCCACCTCCAACCACATTGACAATGCCGCCTCAGTCAATGCTACATCCACCATTATCCTCATCCCTGCCAACCACCTTGCAAGTCCACAACCCAAGAGCAAACAAGAGCACAGCTTTCATAGCCGGATCATGCGCCGTTGGTGGACTTGTCGCCGTCGCTCTCTTCCTTGCCATTCTGTTTCTCTGTTACAATCGTAGGCGGAGCAAAAACAACAGTGCCCTTTTGGCGGATCCCCATAAAACACCACCATTCGCCACAAAAGATGTTCGTCTACCAGGAGTCCATGTTATCAGGGTGCTATCCAGCTCCAACGTCCCACAATCTCCAATAAGCCGCAATGCCGGCTCTGCTTCGATCAAATCCAGATATCAGTTTCCACATCCGCCTCAAACTCAAAGGCCAGCTGGGTCGCCTTTCGATTTCTCAAATGGGATTTTCACATATGATCAAATAGTGGTGGCAACCAATGGCTTTTCTGAAGCCAACCTTCTTGGACAAGGCGGCTTCGGGTATGTTCACAAGGGAGTGCTTCCAAGTGGAAAAGAAGTTGCAGTCAAGCAGTTGAAGACAGGAAGCCGGCAAGGGGAGCGAGAATTTCAGTCCGAGGTTGACATCATTAGCCGCGTTCATCACAAGCATCTGGTTTCTTTGGTTGGATACTGCACAACCGGGGTTGATAGGTTGCTTGTTTATGAGTTTGTTCCAAACAACACCTTGGAATTCCACTTACACGGAGAAGGGCAGCCTGTTCTGGAGTGGGAAATCAGACTCAGAATTGCTACTGGATCAGCAAAAGGACTCGCATATCTCCATGAAGATTGCAATCCAAAAATCATTCATCGCGACATCAAAGCGTCTAATATTCTTCTGGATCATAACTTTGAAGCCAAGGTTTCTGACTTTGGACTGGCCAAATCCTTCTCTGATACCAACACTCACATGACTCACTTTTCGACACGAGTAGTGGGAACGTTTGGGTACCTGGCTCCAGAATACGCATCGAGCGGTAAGGTAACTGACAAATCAGACGTGTATTCATACGGGGTTGTACTTCTAGAACTGATCACTGGACGCCGTCCTATCAGTACTTCAGAATCCGTAAGGAACAAGGGCCTAGTGCAGTGGGCCAGGCCATTGCTCACTCAAGCGCTGGAAGATGGTGATTTCGATGCACTCACTGATCCAAGATTGGAGAAAAACTACAAGAAGAATGAGATGGCTCGAATGGTTGCTTGCGCCGCTGCTTGCGTACGGCATTCAGCATGGCTTCGACCGCGAATGAGTCAAGTAGTCCACGCTTTAGAAGGAGTCGCTTCCTTGACGGAGCTTCGTGAAGGAATCACACCAGGAAACAGCACATTACACAATGGCTTCGAGAATGCATACCTCGATATCAGTAGGTACAGTGAAACTACCAGTGGATACGGTCTTAACCTTTCCGGCTCCAGCAGCGAGGGCCAACGAATGGTGTGGAGTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004675 GO:0004888 GO:0005575 GO:0005623 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0007154 GO:0007165 GO:0007166 GO:0007167 GO:0007178 GO:0008150 GO:0008152 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019199 GO:0019538 GO:0023052 GO:0036211 GO:0038023 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0060089 GO:0065007 GO:0071704 GO:0071944 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Pkinase Pkinase_Tyr

Protein Analysis

717

Amino Acids

76.2

Weight (kDa)

8.97

Isoelectric Point (pI)

68.96

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Pkinase	PF00069	384 - 590	2.1e-45	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	386 - 657	1.5e-45	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0016478)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G32710
fragaria_vesca	FvH4_2g36150
malus_domestica	MD15G1098100.v1.1
prunus_persica	Prupe.1G452900_v2.0.a1 Prupe.1G452900_v2.0.a1
pyrus_communis	pycom15g08990
rosa_chinensis	RchiOBHm_Chr6g0305721
rosa_laevigata	RLG00000010865
rosa_multiflora	Rmu_sc0001809.1_g000037
rosa_roxburghii	Rroxscaffold_7G00162410
rosa_rugosa	Rorug06G0343500
rosa_samantha	Rh6BG446400 Rh6CG468900
rosa_wichuraiana	Rw6G039690

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	2 cut(s)	526, 616
Acc36I	ACCTGC	2 cut(s)	526, 616
Acc65I	GGTACC	1 cut(s)	1650
AccB1I	GGYRCC	1 cut(s)	1650
AccB7I	CCANNNNNTGG	1 cut(s)	2137
AccBSI	CCGCTC	2 cut(s)	506, 1677
AccI	GTMKAC	1 cut(s)	943
AccII	CGCG	3 cut(s)	1296, 1515, 1948
AclI	AACGTT	1 cut(s)	1643
AclWI	GGATC	6 cut(s)	805, 896, 909, 1465, 1551, 1847
AcoI	YGGCCR	2 cut(s)	627, 1581
AcsI	RAATTY	2 cut(s)	1265, 1391
AcuI	CTGAAG	3 cut(s)	294, 1170, 1746
AcyI	GRCGYC	1 cut(s)	1744
AfaI	GTAC	6 cut(s)	166, 1652, 1722, 1759, 1923, 2075
AfeI	AGCGCT	1 cut(s)	1821
AfiI	CCNNNNNNNGG	3 cut(s)	898, 1255, 2137
AflIII	ACRYGT	2 cut(s)	475, 1701
AgsI	TTSAA	2 cut(s)	1237, 1556
AhlI	ACTAGT	1 cut(s)	161
AjiI	CACGTC	1 cut(s)	1702
AjnI	CCWGG	4 cut(s)	946, 1653, 1799, 2017
AjuI	GAANNNNNNNTTGG	2 cut(s)	580, 612
AluBI	AGCT	5 cut(s)	253, 785, 978, 1076, 1999
AluI	AGCT	5 cut(s)	253, 785, 978, 1076, 1999
Alw21I	GWGCWC	1 cut(s)	782
AlwI	GGATC	6 cut(s)	805, 896, 909, 1465, 1551, 1847
Aor51HI	AGCGCT	1 cut(s)	1821
AoxI	GGCC	7 cut(s)	627, 1070, 1581, 1783, 1797, 1802, 2128
ApeKI	GCWGC	4 cut(s)	32, 1414, 1913, 2121
ApoI	RAATTY	2 cut(s)	1265, 1391
ArsI	GACNNNNNNTTYG	2 cut(s)	1606, 1638
Asp718I	GGTACC	1 cut(s)	1650
AspLEI	GCGC	3 cut(s)	806, 1822, 1910
AspS9I	GGNCC	3 cut(s)	1783, 1797, 2128
AsuC2I	CCSGG	1 cut(s)	1342
AsuHPI	GGTGA	8 cut(s)	96, 147, 207, 334, 342, 357, 447, 1844
BaeGI	GKGCMC	1 cut(s)	892
BalI	TGGCCA	2 cut(s)	629, 1583
BamHI	GGATCC	1 cut(s)	901
BanI	GGYRCC	1 cut(s)	1650
BauI	CACGAG	1 cut(s)	1629
BbsI	GAAGAC	1 cut(s)	1244
Bbv12I	GWGCWC	1 cut(s)	782
BbvCI	CCTCAGC	1 cut(s)	249
BbvI	GCAGC	4 cut(s)	19, 1426, 1900, 2133
BccI	CCATC	9 cut(s)	157, 289, 364, 382, 436, 505, 652, 1823, 1882
BceAI	ACGGC	5 cut(s)	85, 791, 809, 1731, 1940
BciT130I	CCWGG	4 cut(s)	948, 1655, 1801, 2019
BciVI	GTATCC	2 cut(s)	1322, 2087
BclI	TGATCA	2 cut(s)	1117, 1734
BcnI	CCSGG	1 cut(s)	1342
BcuI	ACTAGT	1 cut(s)	161
BfaI	CTAG	3 cut(s)	162, 1727, 1787
BfmI	CTRYAG	1 cut(s)	638
BfoI	RGCGCY	1 cut(s)	1823
BfuAI	ACCTGC	2 cut(s)	526, 616
BfuI	GTATCC	2 cut(s)	1322, 2087
BglI	GCCNNNNNGGC	1 cut(s)	896
BmcAI	AGTACT	2 cut(s)	166, 1759
Bme1390I	CCNGG	5 cut(s)	948, 1342, 1655, 1801, 2019
BmgBI	CACGTC	1 cut(s)	1702
BmgT120I	GGNCC	3 cut(s)	1783, 1797, 2128
BmiI	GGNNCC	4 cut(s)	903, 1652, 1659, 2116
BmrFI	CCNGG	5 cut(s)	948, 1342, 1655, 1801, 2019
BmsI	GCATC	4 cut(s)	114, 1318, 1679, 1831
BpiI	GAAGAC	1 cut(s)	1244
BpmI	CTGGAG	4 cut(s)	24, 1445, 1644, 2101
Bpu10I	CCTNAGC	1 cut(s)	249
BpuEI	CTTGAG	1 cut(s)	1800
BpuMI	CCSGG	1 cut(s)	1342
BsaBI	GATNNNNATC	1 cut(s)	1494
BsaHI	GRCGYC	1 cut(s)	1744
BsaJI	CCNNGG	5 cut(s)	14, 1275, 1341, 1386, 1560
Bsc4I	CCNNNNNNNGG	3 cut(s)	898, 1255, 2137
Bse118I	RCCGGY	2 cut(s)	1013, 1248
Bse1I	ACTGG	7 cut(s)	41, 266, 342, 1459, 1584, 1744, 2088
Bse3DI	GCAATG	5 cut(s)	131, 260, 611, 1015, 1805
Bse8I	GATNNNNATC	1 cut(s)	1494
BseBI	CCWGG	4 cut(s)	948, 1655, 1801, 2019
BseDI	CCNNGG	5 cut(s)	14, 1275, 1341, 1386, 1560
BseGI	GGATG	4 cut(s)	149, 715, 731, 1051
BseJI	GATNNNNATC	1 cut(s)	1494
BseLI	CCNNNNNNNGG	3 cut(s)	898, 1255, 2137
BseMI	GCAATG	5 cut(s)	131, 260, 611, 1015, 1805
BseMII	CTCAG	3 cut(s)	263, 716, 1456
BseNI	ACTGG	7 cut(s)	41, 266, 342, 1459, 1584, 1744, 2088
BseRI	GAGGAG	4 cut(s)	159, 219, 285, 312
BseSI	GKGCMC	1 cut(s)	892
BseXI	GCAGC	4 cut(s)	19, 1426, 1900, 2133
BseYI	CCCAGC	1 cut(s)	1076
BsgI	GTGCAG	2 cut(s)	1318, 1811
Bsh1236I	CGCG	3 cut(s)	1296, 1515, 1948
Bsh1285I	CGRYCG	1 cut(s)	1946
BshFI	GGCC	7 cut(s)	629, 1072, 1583, 1785, 1799, 1804, 2130
BshNI	GGYRCC	1 cut(s)	1650
BsiEI	CGRYCG	1 cut(s)	1946
BsiHKAI	GWGCWC	1 cut(s)	782
BsiSI	CCGG	5 cut(s)	795, 1014, 1249, 1341, 2112
BsiWI	CGTACG	1 cut(s)	1921
BslFI	GGGAC	1 cut(s)	971
BslI	CCNNNNNNNGG	3 cut(s)	898, 1255, 2137
BsmFI	GGGAC	1 cut(s)	971
BsmI	GAATGC	3 cut(s)	361, 1927, 2056
BsnI	GGCC	7 cut(s)	629, 1072, 1583, 1785, 1799, 1804, 2130
Bsp1286I	GDGCHC	2 cut(s)	782, 892
Bsp143I	GATC	8 cut(s)	797, 901, 1026, 1117, 1457, 1543, 1734, 1852
Bsp68I	TCGCGA	1 cut(s)	1515
BspANI	GGCC	7 cut(s)	629, 1072, 1583, 1785, 1799, 1804, 2130
BspCNI	CTCAG	3 cut(s)	262, 715, 1455
BspFNI	CGCG	3 cut(s)	1296, 1515, 1948
BspLI	GGNNCC	4 cut(s)	903, 1652, 1659, 2116
BspMI	ACCTGC	2 cut(s)	526, 616
BspPI	GGATC	6 cut(s)	805, 896, 909, 1465, 1551, 1847
BspT107I	GGYRCC	1 cut(s)	1650
BsrBI	CCGCTC	2 cut(s)	506, 1677
BsrDI	GCAATG	5 cut(s)	131, 260, 611, 1015, 1805
BsrFI	RCCGGY	2 cut(s)	1013, 1248
BsrI	ACTGG	7 cut(s)	41, 266, 342, 1459, 1584, 1744, 2088
BssAI	RCCGGY	2 cut(s)	1013, 1248
BssECI	CCNNGG	5 cut(s)	14, 1275, 1341, 1386, 1560
BssMI	GATC	8 cut(s)	797, 901, 1026, 1117, 1457, 1543, 1734, 1852
BssNI	GRCGYC	1 cut(s)	1744
BssSI	CACGAG	1 cut(s)	1629
BssT1I	CCWWGG	2 cut(s)	1386, 1560
Bst2BI	CACGAG	1 cut(s)	1629
Bst2UI	CCWGG	4 cut(s)	948, 1655, 1801, 2019
Bst4CI	ACNGT	7 cut(s)	18, 69, 120, 289, 887, 2078, 2099
Bst6I	CTCTTC	4 cut(s)	352, 394, 447, 839
BstACI	GRCGYC	1 cut(s)	1744
BstC8I	GCNNGC	6 cut(s)	631, 1015, 1074, 1250, 1906, 1918
BstDEI	CTNAG	3 cut(s)	249, 702, 1442
BstDSI	CCRYGG	1 cut(s)	14
BstEII	GGTNACC	1 cut(s)	340
BstF5I	GGATG	4 cut(s)	149, 715, 731, 1051
BstFNI	CGCG	3 cut(s)	1296, 1515, 1948
BstH2I	RGCGCY	1 cut(s)	1823
BstHHI	GCGC	3 cut(s)	806, 1822, 1910
BstKTI	GATC	8 cut(s)	800, 904, 1029, 1120, 1460, 1546, 1737, 1855
BstMBI	GATC	8 cut(s)	797, 901, 1026, 1117, 1457, 1543, 1734, 1852
BstMCI	CGRYCG	1 cut(s)	1946
BstNI	CCWGG	4 cut(s)	948, 1655, 1801, 2019
BstNSI	RCATGY	1 cut(s)	479
BstPI	GGTNACC	1 cut(s)	340
BstSCI	CCNGG	5 cut(s)	946, 1340, 1653, 1799, 2017
BstSFI	CTRYAG	1 cut(s)	638
BstSLI	GKGCMC	1 cut(s)	892
BstUI	CGCG	3 cut(s)	1296, 1515, 1948
BstV1I	GCAGC	4 cut(s)	19, 1426, 1900, 2133
BstV2I	GAAGAC	1 cut(s)	1244
BstX2I	RGATCY	1 cut(s)	901
BstYI	RGATCY	1 cut(s)	901
BsuI	GTATCC	2 cut(s)	1322, 2087
BsuRI	GGCC	7 cut(s)	629, 1072, 1583, 1785, 1799, 1804, 2130
BtgI	CCRYGG	1 cut(s)	14
BtgZI	GCGATG	2 cut(s)	342, 1496
BtrI	CACGTC	1 cut(s)	1702
BtsCI	GGATG	4 cut(s)	149, 715, 731, 1051
BtsI	GCAGTG	3 cut(s)	20, 422, 1799
BtsIMutI	CAGTG	9 cut(s)	20, 335, 422, 892, 1737, 1799, 1848, 2083, 2095
BtuMI	TCGCGA	1 cut(s)	1515
BveI	ACCTGC	2 cut(s)	526, 616
Cac8I	GCNNGC	6 cut(s)	631, 1015, 1074, 1250, 1906, 1918
CfoI	GCGC	3 cut(s)	806, 1822, 1910
Cfr10I	RCCGGY	2 cut(s)	1013, 1248
Cfr13I	GGNCC	3 cut(s)	1783, 1797, 2128
CseI	GACGC	2 cut(s)	1515, 1752
Csp6I	GTAC	6 cut(s)	165, 1651, 1721, 1758, 1922, 2074
CspCI	CAANNNNNGTGG	8 cut(s)	42, 77, 102, 137, 504, 539, 594, 629
CviAII	CATG	6 cut(s)	476, 801, 956, 1484, 1612, 1935
CviQI	GTAC	6 cut(s)	165, 1651, 1721, 1758, 1922, 2074
DdeI	CTNAG	3 cut(s)	249, 702, 1442
DpnI	GATC	8 cut(s)	799, 903, 1028, 1119, 1459, 1545, 1736, 1854
DpnII	GATC	8 cut(s)	797, 901, 1026, 1117, 1457, 1543, 1734, 1852
EaeI	YGGCCR	2 cut(s)	627, 1581
Eam1104I	CTCTTC	4 cut(s)	352, 394, 447, 839
EarI	CTCTTC	4 cut(s)	352, 394, 447, 839
EciI	GGCGGA	5 cut(s)	231, 435, 886, 914, 1044
Eco130I	CCWWGG	2 cut(s)	1386, 1560
Eco32I	GATATC	2 cut(s)	1040, 2065
Eco47III	AGCGCT	1 cut(s)	1821
Eco57I	CTGAAG	3 cut(s)	294, 1170, 1746
Eco91I	GGTNACC	1 cut(s)	340
EcoO109I	RGGNCCY	1 cut(s)	1783
EcoO65I	GGTNACC	1 cut(s)	340
EcoRI	GAATTC	1 cut(s)	1391
EcoRII	CCWGG	4 cut(s)	946, 1653, 1799, 2017
EcoRV	GATATC	2 cut(s)	1040, 2065
EcoT14I	CCWWGG	2 cut(s)	1386, 1560
EcoT22I	ATGCAT	1 cut(s)	2056
ErhI	CCWWGG	2 cut(s)	1386, 1560
FaeI	CATG	6 cut(s)	479, 804, 959, 1487, 1615, 1938
FalI	AAGNNNNNCTT	2 cut(s)	1143, 1175
FaqI	GGGAC	1 cut(s)	971
FatI	CATG	6 cut(s)	475, 800, 955, 1483, 1611, 1934
FauI	CCCGC	1 cut(s)	550
FauNDI	CATATG	1 cut(s)	1114
FbaI	TGATCA	2 cut(s)	1117, 1734
FblI	GTMKAC	1 cut(s)	943
FokI	GGATG	4 cut(s)	136, 702, 718, 1038
FspBI	CTAG	3 cut(s)	162, 1727, 1787
GlaI	GCGC	3 cut(s)	805, 1821, 1909
GsaI	CCCAGC	1 cut(s)	1080
GsuI	CTGGAG	4 cut(s)	24, 1445, 1644, 2101
HaeII	RGCGCY	1 cut(s)	1823
HaeIII	GGCC	7 cut(s)	629, 1072, 1583, 1785, 1799, 1804, 2130
HapII	CCGG	5 cut(s)	795, 1014, 1249, 1341, 2112
HgaI	GACGC	2 cut(s)	1515, 1752
HhaI	GCGC	3 cut(s)	806, 1822, 1910
Hin1I	GRCGYC	1 cut(s)	1744
Hin1II	CATG	6 cut(s)	479, 804, 959, 1487, 1615, 1938
Hin6I	GCGC	3 cut(s)	804, 1820, 1908
HinP1I	GCGC	3 cut(s)	804, 1820, 1908
HincII	GTYRAC	2 cut(s)	528, 1282
HindII	GTYRAC	2 cut(s)	528, 1282
HpaII	CCGG	5 cut(s)	795, 1014, 1249, 1341, 2112
HphI	GGTGA	8 cut(s)	96, 147, 207, 334, 342, 357, 447, 1844
Hpy166II	GTNNAC	7 cut(s)	528, 757, 815, 944, 1189, 1282, 1966
Hpy188I	TCNGA	9 cut(s)	199, 1150, 1276, 1439, 1445, 1570, 1597, 1699, 1765
Hpy188III	TCNNGA	8 cut(s)	1035, 1424, 1514, 1541, 1661, 1727, 2003, 2047
Hpy8I	GTNNAC	7 cut(s)	528, 757, 815, 944, 1189, 1282, 1966
Hpy99I	CGWCG	1 cut(s)	830
HpyAV	CCTTC	7 cut(s)	318, 447, 1169, 1403, 1600, 1970, 2000
HpyCH4III	ACNGT	7 cut(s)	18, 69, 120, 289, 887, 2078, 2099
HpyCH4IV	ACGT	3 cut(s)	984, 1643, 1701
HpyCH4V	TGCA	9 cut(s)	521, 611, 751, 1223, 1335, 1494, 1792, 1844, 2054
HpyF3I	CTNAG	3 cut(s)	249, 702, 1442
HpySE526I	ACGT	3 cut(s)	984, 1643, 1701
Hsp92I	GRCGYC	1 cut(s)	1744
Hsp92II	CATG	6 cut(s)	479, 804, 959, 1487, 1615, 1938
HspAI	GCGC	3 cut(s)	804, 1820, 1908
KpnI	GGTACC	1 cut(s)	1654
KroI	GCCGGC	2 cut(s)	1013, 1248
KroNI	GCCGGC	2 cut(s)	1015, 1250
Ksp22I	TGATCA	2 cut(s)	1117, 1734
Kzo9I	GATC	8 cut(s)	797, 901, 1026, 1117, 1457, 1543, 1734, 1852
LmnI	GCTCC	7 cut(s)	511, 873, 983, 1258, 1663, 1996, 2120
Lsp1109I	GCAGC	4 cut(s)	19, 1426, 1900, 2133
LweI	GCATC	4 cut(s)	114, 1318, 1679, 1831
MaeI	CTAG	3 cut(s)	162, 1727, 1787
MaeII	ACGT	3 cut(s)	984, 1643, 1701
MaeIII	GTNAC	8 cut(s)	18, 43, 102, 289, 340, 382, 857, 1684
MalI	GATC	8 cut(s)	799, 903, 1028, 1119, 1459, 1545, 1736, 1854
MbiI	CCGCTC	2 cut(s)	506, 1677
MboI	GATC	8 cut(s)	797, 901, 1026, 1117, 1457, 1543, 1734, 1852
MboII	GAAGA	9 cut(s)	339, 381, 434, 826, 1249, 1499, 1529, 1838, 1891
MflI	RGATCY	1 cut(s)	901
MhlI	GDGCHC	2 cut(s)	782, 892
MlsI	TGGCCA	2 cut(s)	629, 1583
MluCI	AATT	3 cut(s)	1265, 1391, 1446
MluNI	TGGCCA	2 cut(s)	629, 1583
MlyI	GAGTC	7 cut(s)	592, 960, 1434, 1464, 1609, 1963, 1989
MmeI	TCCRAC	5 cut(s)	611, 678, 704, 1005, 1306
Mox20I	TGGCCA	2 cut(s)	629, 1583
Mph1103I	ATGCAT	1 cut(s)	2056
MroNI	GCCGGC	2 cut(s)	1013, 1248
MscI	TGGCCA	2 cut(s)	629, 1583
MseI	TTAA	2 cut(s)	2103, 2149
MslI	CAYNNNNRTG	1 cut(s)	1610
Msp20I	TGGCCA	2 cut(s)	629, 1583
MspA1I	CMGCKG	2 cut(s)	1076, 1913
MspI	CCGG	5 cut(s)	795, 1014, 1249, 1341, 2112
MspR9I	CCNGG	5 cut(s)	948, 1342, 1655, 1801, 2019
Mva1269I	GAATGC	3 cut(s)	361, 1927, 2056
MvaI	CCWGG	4 cut(s)	948, 1655, 1801, 2019
MvnI	CGCG	3 cut(s)	1296, 1515, 1948
NaeI	GCCGGC	2 cut(s)	1015, 1250
NciI	CCSGG	1 cut(s)	1342
NdeI	CATATG	1 cut(s)	1114
NdeII	GATC	8 cut(s)	797, 901, 1026, 1117, 1457, 1543, 1734, 1852
NgoMIV	GCCGGC	2 cut(s)	1013, 1248
NlaIII	CATG	6 cut(s)	479, 804, 959, 1487, 1615, 1938
NlaIV	GGNNCC	4 cut(s)	903, 1652, 1659, 2116
NmuCI	GTSAC	5 cut(s)	18, 102, 289, 340, 382
NruI	TCGCGA	1 cut(s)	1515
NsiI	ATGCAT	1 cut(s)	2056
NspI	RCATGY	1 cut(s)	479
PaqCI	CACCTGC	2 cut(s)	526, 616
PciI	ACATGT	1 cut(s)	475
PctI	GAATGC	3 cut(s)	361, 1927, 2056
PdiI	GCCGGC	2 cut(s)	1015, 1250
PfeI	GAWTC	3 cut(s)	596, 1766, 2010
Pfl23II	CGTACG	1 cut(s)	1921
PflFI	GACNNNGTC	2 cut(s)	67, 1746
PflMI	CCANNNNNTGG	1 cut(s)	2137
PleI	GAGTC	7 cut(s)	591, 959, 1434, 1464, 1609, 1962, 1988
PpsI	GAGTC	7 cut(s)	591, 959, 1434, 1464, 1609, 1962, 1988
PscI	ACATGT	1 cut(s)	475
Psp1406I	AACGTT	1 cut(s)	1643
Psp6I	CCWGG	4 cut(s)	946, 1653, 1799, 2017
PspEI	GGTNACC	1 cut(s)	340
PspFI	CCCAGC	1 cut(s)	1076
PspGI	CCWGG	4 cut(s)	946, 1653, 1799, 2017
PspLI	CGTACG	1 cut(s)	1921
PspN4I	GGNNCC	4 cut(s)	903, 1652, 1659, 2116
PspPI	GGNCC	3 cut(s)	1783, 1797, 2128
PsuI	RGATCY	1 cut(s)	901
PsyI	GACNNNGTC	2 cut(s)	67, 1746
PvuII	CAGCTG	1 cut(s)	1076
RruI	TCGCGA	1 cut(s)	1515
RsaI	GTAC	6 cut(s)	166, 1652, 1722, 1759, 1923, 2075
RsaNI	GTAC	6 cut(s)	165, 1651, 1721, 1758, 1922, 2074
RseI	CAYNNNNRTG	1 cut(s)	1610
SaqAI	TTAA	2 cut(s)	2103, 2149
Sau3AI	GATC	8 cut(s)	797, 901, 1026, 1117, 1457, 1543, 1734, 1852
Sau96I	GGNCC	3 cut(s)	1783, 1797, 2128
ScaI	AGTACT	2 cut(s)	166, 1759
SchI	GAGTC	7 cut(s)	592, 960, 1434, 1464, 1609, 1963, 1989
ScrFI	CCNGG	5 cut(s)	948, 1342, 1655, 1801, 2019
SduI	GDGCHC	2 cut(s)	782, 892
SfaNI	GCATC	4 cut(s)	114, 1318, 1679, 1831
SfcI	CTRYAG	1 cut(s)	638
SmiMI	CAYNNNNRTG	1 cut(s)	1610
SmlI	CTYRAG	1 cut(s)	1815
SmoI	CTYRAG	1 cut(s)	1815
SpeI	ACTAGT	1 cut(s)	161
Sse9I	AATT	3 cut(s)	1265, 1391, 1446
SspI	AATATT	1 cut(s)	1534
SspMI	CTAG	3 cut(s)	162, 1727, 1787
StyD4I	CCNGG	5 cut(s)	946, 1340, 1653, 1799, 2017
StyI	CCWWGG	2 cut(s)	1386, 1560
TaaI	ACNGT	7 cut(s)	18, 69, 120, 289, 887, 2078, 2099
TaiI	ACGT	3 cut(s)	987, 1646, 1704
TaqI	TCGA	9 cut(s)	1025, 1089, 1625, 1673, 1839, 1894, 1942, 2046, 2061
TasI	AATT	3 cut(s)	1265, 1391, 1446
TatI	WGTACW	3 cut(s)	164, 1720, 1757
TauI	GCSGC	9 cut(s)	13, 91, 130, 184, 700, 1008, 1176, 1296, 1913
TfiI	GAWTC	3 cut(s)	596, 1766, 2010
Tru1I	TTAA	2 cut(s)	2103, 2149
Tru9I	TTAA	2 cut(s)	2103, 2149
TscAI	CASTG	9 cut(s)	27, 342, 429, 892, 1744, 1799, 1855, 2083, 2095
TseFI	GTSAC	5 cut(s)	18, 102, 289, 340, 382
TseI	GCWGC	4 cut(s)	32, 1414, 1913, 2121
Tsp45I	GTSAC	5 cut(s)	18, 102, 289, 340, 382
TspDTI	ATGAA	5 cut(s)	778, 1289, 1499, 1500, 1698
TspGWI	ACGGA	3 cut(s)	1419, 1759, 2009
TspRI	CASTG	9 cut(s)	27, 342, 429, 892, 1744, 1799, 1855, 2083, 2095
Tth111I	GACNNNGTC	2 cut(s)	67, 1746
Van91I	CCANNNNNTGG	1 cut(s)	2137
XapI	RAATTY	2 cut(s)	1265, 1391
XbaI	TCTAGA	1 cut(s)	1726
XceI	RCATGY	1 cut(s)	479
XmiI	GTMKAC	1 cut(s)	943
XspI	CTAG	3 cut(s)	162, 1727, 1787
ZrmI	AGTACT	2 cut(s)	166, 1759
Zsp2I	ATGCAT	1 cut(s)	2056

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.