Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000007

Orthogroup ID

OG0016478

Physical Location & Seq

Genomic Coordinates Reverse (-)

4919471 .. 4929463

Gene Structure 9993 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_7G00162410.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2190 bp

ATGTCTTCACCGCCGTGGTCTCTGCCTTCGGCTGCCGTTCCTCTCACCACACCACCACCACTTCCACCGTCACAGCCACCGGCATTGCCGCCACTGTCACCACCTTTTGTATCCCCGCCATTTCCACCTACTAGTCTTCCTGCCCTGCCTCCTGTACACAACTCTATCCCTCCTGTTTCCTCACCATTGCCATCTGTGGTCCAACCTCCACCCCCACCAGTCACCTCTCCACCACCGCCGTCTGTCACTTCTCCTCCTCCACCTTTACTAACCTTTCCGCCACCACCTTCACTACCGCCATCAAGACCTTCTCCACCTCCACCTCCACAGCCTACATTATCACCACCACCATTACCAACACCAAAAACACCATATCTTTCTCCTCCAACCAAACCACTAACTTCTCCGCCGCTGCCACCACCCTCAACAACTCCAACCAACGACTCTCCACCACCAACATTGTCAACTCCCCTACCTCCTGTGACCACCACTACTCCTCCACCTCCTTCAGCCACTCCAAGCAACAGCGCTCCACCACCTGATTTAGCAACTCTGCTTCCACCAGTGGCTACCAGTCCTAAACCACCACCTACTTTGGCCAGAACTCTGCCACCTTCGCCTAGTAATGCTGTATCACCTTTGCCTACAACAACATGGACACCACCTCCATTGATCCATTCACCATCACCGTCCTTATTGCCGGCCACCTTGCAAGTTCAGAAGCCACAGCCAAAAGCAGCAGCAGGCCTCGTAGCTGGATGTGTCATTGTTGGAGTTGTTGTAGTTTTCCTCCTCCTTGGAATTGTACTTATTTGCTACAAGCGTAGGAGTAGAAAGAACAACACTATTCCGGAAGATTACTACAAACCACCCTCCTTGGGACCAAAAGATGGCTGTTATGATGCGGTTCAGCCCCATCACATTGTTCCTCAACCTGGCGTCCATGTTATCAGGGTGCTGTCCAGCACATCAACATCTCCAATGCGCCGTGCCGCTGGCTCTGAGGTTTTATTTGCGCATCAACCTCAATGGCTTGGTTTTCCCATGGACATCTCAAATGGAACATTCACCTATGATCAATTGTTGGTAGCTACAAATGGGTTTTCAGAGGCTAACCTTCTTGGACAAGGCGGTTTTGGGTATGTCCACAAGGGAGTACTTCCAGGTGGGAAGGAAGTTGCAGTGAAGCAGTTAAAGACAGGAAGCCGGCAAGGGGAGCGAGAGTTTCATGCTGAGGTTGACATCATTAGCCGGGTGCATCACAAGCATCTAGTTTCATTAGTAGGGCACTGTATCAAGGAAGCAGAGAGGTTGCTTGTATATGAGTTCGTTCCAAATAACACCTTAGAATTCCACTTACATGGACTAGGACAGACGGTTTTGGAGTGGGAAATAAGAATGAAAATAGCTACTGGCTCTGCAAAAGGACTGGCATATCTCCATGAAGATTGCAATCCAAAAATCATTCATCGTGATATCAAGGCATCTAATATTCTTGTGGATCAGAAGTTTGAAGCAAAGGTTTCTGACTTTGGACTGGCCAAATCGTTCTCTGGTACCAATACTCACATTACTCACCTTTCCACTCGAGTAGTGGGAACATTTGGGTACCTTGCTCCAGAGTACGCATCAAGCGGTAAGGTCACAGAGAAATCAGATGTGTATTCATACGGAGTTGTACTCCTAGAACTTATAACCGGACGTCCACCTATCAGTACAATAGATTCCTTGACGAATGAGGGTCTGGTTCAGTGGGCAAGGCCATTGCTCACTCAAGCCCTGGAAGATGGTGCTTTTGATGCTCTTGTGGATCCACGATTGGAGACAAATTACAACAAGAATGAGATGGCTAGAATGGTCGCTTGTGCTGCTGCTTGTGTACGACATTCAGCATGGCTTCGACCAAGAATGAGCCAGATAGTCCAGGCTTTAGAAGGAGTTGCTTCGTTGATGGATCTTCGGGGAGGAGTTACACCAGGAAACAGTGCGGTATACAATTGCTTGGGGAATTCACATTATAACTCCCGGCAATATGAGGAAGATTTGAAGAATTCCACGGTAACAATGCCAAGTCAAGAGTCTGGCATTAGTAAATACACTGAAACTACCAGTGAGTATGGTCTTAATCCCTCAGGCTCAAGCAGCGAAACCAGCAAACAATCTGAAGTTAAGATAACAAAGTTACACTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004675 GO:0004888 GO:0005575 GO:0005623 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0007154 GO:0007165 GO:0007166 GO:0007167 GO:0007178 GO:0008150 GO:0008152 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019199 GO:0019538 GO:0023052 GO:0036211 GO:0038023 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0060089 GO:0065007 GO:0071704 GO:0071944 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Pkinase Pkinase_Tyr

Protein Analysis

729

Amino Acids

77.77

Weight (kDa)

8.59

Isoelectric Point (pI)

64.59

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Pkinase	PF00069	370 - 576	7e-45	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	372 - 644	6.6e-46	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0016478)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G32710
fragaria_vesca	FvH4_2g36150
malus_domestica	MD15G1098100.v1.1
prunus_persica	Prupe.1G452900_v2.0.a1 Prupe.1G452900_v2.0.a1
pyrus_communis	pycom15g08990
rosa_chinensis	RchiOBHm_Chr6g0305721
rosa_laevigata	RLG00000010865
rosa_multiflora	Rmu_sc0001809.1_g000037
rosa_roxburghii	Rroxscaffold_7G00162410
rosa_rugosa	Rorug06G0343500
rosa_samantha	Rh6BG446400 Rh6CG468900
rosa_wichuraiana	Rw6G039690

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	1694, 2019
AatII	GACGTC	1 cut(s)	1705
Acc16I	TGCGCA	1 cut(s)	1017
Acc65I	GGTACC	2 cut(s)	1556, 1608
AccB1I	GGYRCC	2 cut(s)	1556, 1608
AccB7I	CCANNNNNTGG	1 cut(s)	890
AccI	GTMKAC	1 cut(s)	1992
AccIII	TCCGGA	1 cut(s)	850
AclWI	GGATC	5 cut(s)	667, 1509, 1805, 1818, 1962
AcoI	YGGCCR	3 cut(s)	597, 702, 1539
AcsI	RAATTY	3 cut(s)	1349, 2008, 2050
AcuI	CTGAAG	2 cut(s)	492, 2184
AcyI	GRCGYC	2 cut(s)	939, 1702
AfaI	GTAC	9 cut(s)	156, 807, 1158, 1558, 1610, 1625, 1680, 1717, 1881
AfeI	AGCGCT	1 cut(s)	529
AfiI	CCNNNNNNNGG	4 cut(s)	878, 890, 935, 1213
AgsI	TTSAA	2 cut(s)	1514, 2047
AhlI	ACTAGT	1 cut(s)	131
AjnI	CCWGG	5 cut(s)	934, 1162, 1779, 1923, 1975
AleI	CACNNNNGTG	1 cut(s)	13
AluBI	AGCT	3 cut(s)	755, 1091, 1409
AluI	AGCT	3 cut(s)	755, 1091, 1409
Alw26I	GTCTC	2 cut(s)	24, 1817
AlwI	GGATC	5 cut(s)	667, 1509, 1805, 1818, 1962
Ama87I	CYCGRG	1 cut(s)	1587
Aor13HI	TCCGGA	1 cut(s)	850
Aor51HI	AGCGCT	1 cut(s)	529
AoxI	GGCC	5 cut(s)	597, 702, 745, 1539, 1760
ApeKI	GCWGC	7 cut(s)	32, 412, 737, 740, 1868, 1871, 2142
ApoI	RAATTY	3 cut(s)	1349, 2008, 2050
Asp718I	GGTACC	2 cut(s)	1556, 1608
AspLEI	GCGC	3 cut(s)	530, 987, 1018
AspS9I	GGNCC	2 cut(s)	199, 881
AsuC2I	CCSGG	2 cut(s)	1253, 2026
AvaI	CYCGRG	1 cut(s)	1587
AvaII	GGWCC	2 cut(s)	199, 881
AxyI	CCTNAGG	1 cut(s)	2131
BaeGI	GKGCMC	1 cut(s)	1290
BalI	TGGCCA	2 cut(s)	599, 1541
BamHI	GGATCC	1 cut(s)	1810
BanI	GGYRCC	2 cut(s)	1556, 1608
BbsI	GAAGAC	1 cut(s)	128
BbvCI	CCTCAGC	1 cut(s)	1233
BbvI	GCAGC	7 cut(s)	19, 399, 749, 752, 1855, 1858, 2154
BccI	CCATC	8 cut(s)	199, 307, 691, 884, 924, 1781, 1840, 1945
BceAI	ACGGC	3 cut(s)	20, 223, 972
BciT130I	CCWGG	5 cut(s)	936, 1164, 1781, 1925, 1977
BciVI	GTATCC	1 cut(s)	121
BclI	TGATCA	1 cut(s)	1075
BcnI	CCSGG	2 cut(s)	1253, 2026
BcoDI	GTCTC	2 cut(s)	24, 1817
BcuI	ACTAGT	1 cut(s)	131
BfaI	CTAG	7 cut(s)	132, 621, 1271, 1367, 1685, 1851, 2188
BfoI	RGCGCY	1 cut(s)	531
BfuI	GTATCC	1 cut(s)	121
BmcAI	AGTACT	1 cut(s)	1158
Bme1390I	CCNGG	7 cut(s)	936, 1164, 1253, 1781, 1925, 1977, 2026
Bme18I	GGWCC	2 cut(s)	199, 881
BmeT110I	CYCGRG	1 cut(s)	1587
BmgT120I	GGNCC	2 cut(s)	199, 881
BmiI	GGNNCC	4 cut(s)	882, 1558, 1610, 1812
BmrFI	CCNGG	7 cut(s)	936, 1164, 1253, 1781, 1925, 1977, 2026
BmsI	GCATC	7 cut(s)	892, 1027, 1267, 1276, 1493, 1637, 1789
BpiI	GAAGAC	1 cut(s)	128
BplI	GAGNNNNNCTC	2 cut(s)	1665, 1697
BpmI	CTGGAG	1 cut(s)	1602
Bpu10I	CCTNAGC	1 cut(s)	1233
BpuEI	CTTGAG	2 cut(s)	1758, 2122
BpuMI	CCSGG	2 cut(s)	1253, 2026
BsaBI	GATNNNNATC	1 cut(s)	1452
BsaHI	GRCGYC	2 cut(s)	939, 1702
BsaI	GGTCTC	1 cut(s)	24
BsaJI	CCNNGG	6 cut(s)	14, 796, 876, 1044, 1779, 2055
BsaWI	WCCGGW	2 cut(s)	850, 1697
Bsc4I	CCNNNNNNNGG	4 cut(s)	878, 890, 935, 1213
Bse118I	RCCGGY	3 cut(s)	79, 700, 1206
Bse1I	ACTGG	7 cut(s)	218, 563, 573, 1417, 1434, 1542, 2109
Bse21I	CCTNAGG	1 cut(s)	2131
Bse3DI	GCAATG	3 cut(s)	83, 185, 1763
Bse8I	GATNNNNATC	1 cut(s)	1452
BseAI	TCCGGA	1 cut(s)	850
BseBI	CCWGG	5 cut(s)	936, 1164, 1781, 1925, 1977
BseDI	CCNNGG	6 cut(s)	14, 796, 876, 1044, 1779, 2055
BseGI	GGATG	1 cut(s)	764
BseJI	GATNNNNATC	1 cut(s)	1452
BseLI	CCNNNNNNNGG	4 cut(s)	878, 890, 935, 1213
BseMI	GCAATG	3 cut(s)	83, 185, 1763
BseMII	CTCAG	3 cut(s)	993, 1224, 2145
BseNI	ACTGG	7 cut(s)	218, 563, 573, 1417, 1434, 1542, 2109
BseRI	GAGGAG	6 cut(s)	243, 246, 372, 486, 782, 1980
BseSI	GKGCMC	1 cut(s)	1290
BseXI	GCAGC	7 cut(s)	19, 399, 749, 752, 1855, 1858, 2154
BshFI	GGCC	5 cut(s)	599, 704, 747, 1541, 1762
BshNI	GGYRCC	2 cut(s)	1556, 1608
BsiHKCI	CYCGRG	1 cut(s)	1587
BsiSI	CCGG	7 cut(s)	80, 701, 851, 1207, 1252, 1698, 2026
BslFI	GGGAC	1 cut(s)	894
BslI	CCNNNNNNNGG	4 cut(s)	878, 890, 935, 1213
BsmAI	GTCTC	2 cut(s)	24, 1817
BsmFI	GGGAC	1 cut(s)	894
BsnI	GGCC	5 cut(s)	599, 704, 747, 1541, 1762
Bso31I	GGTCTC	1 cut(s)	24
BsoBI	CYCGRG	1 cut(s)	1587
Bsp1286I	GDGCHC	1 cut(s)	1290
Bsp13I	TCCGGA	1 cut(s)	850
Bsp1407I	TGTACA	1 cut(s)	154
Bsp143I	GATC	5 cut(s)	672, 1075, 1501, 1810, 1954
Bsp19I	CCATGG	1 cut(s)	1044
BspANI	GGCC	5 cut(s)	599, 704, 747, 1541, 1762
BspCNI	CTCAG	3 cut(s)	994, 1225, 2144
BspEI	TCCGGA	1 cut(s)	850
BspLI	GGNNCC	4 cut(s)	882, 1558, 1610, 1812
BspPI	GGATC	5 cut(s)	667, 1509, 1805, 1818, 1962
BspT107I	GGYRCC	2 cut(s)	1556, 1608
BspTNI	GGTCTC	1 cut(s)	24
BsrDI	GCAATG	3 cut(s)	83, 185, 1763
BsrFI	RCCGGY	3 cut(s)	79, 700, 1206
BsrGI	TGTACA	1 cut(s)	154
BsrI	ACTGG	7 cut(s)	218, 563, 573, 1417, 1434, 1542, 2109
BssAI	RCCGGY	3 cut(s)	79, 700, 1206
BssECI	CCNNGG	6 cut(s)	14, 796, 876, 1044, 1779, 2055
BssMI	GATC	5 cut(s)	672, 1075, 1501, 1810, 1954
BssNAI	GTATAC	1 cut(s)	1993
BssNI	GRCGYC	2 cut(s)	939, 1702
BssT1I	CCWWGG	3 cut(s)	796, 876, 1044
Bst1107I	GTATAC	1 cut(s)	1993
Bst2UI	CCWGG	5 cut(s)	936, 1164, 1781, 1925, 1977
Bst4CI	ACNGT	7 cut(s)	69, 96, 690, 1292, 1378, 1985, 2059
BstACI	GRCGYC	2 cut(s)	939, 1702
BstAUI	TGTACA	1 cut(s)	154
BstC8I	GCNNGC	4 cut(s)	702, 745, 997, 1208
BstDEI	CTNAG	4 cut(s)	1002, 1233, 1345, 2131
BstDSI	CCRYGG	3 cut(s)	14, 1044, 2055
BstF5I	GGATG	1 cut(s)	764
BstH2I	RGCGCY	1 cut(s)	531
BstHHI	GCGC	3 cut(s)	530, 987, 1018
BstKTI	GATC	5 cut(s)	675, 1078, 1504, 1813, 1957
BstMAI	GTCTC	2 cut(s)	24, 1817
BstMBI	GATC	5 cut(s)	672, 1075, 1501, 1810, 1954
BstMWI	GCNNNNNNNGC	7 cut(s)	616, 1216, 1264, 1799, 1868, 2142, 2151
BstNI	CCWGG	5 cut(s)	936, 1164, 1781, 1925, 1977
BstSCI	CCNGG	7 cut(s)	934, 1162, 1251, 1779, 1923, 1975, 2024
BstSLI	GKGCMC	1 cut(s)	1290
BstV1I	GCAGC	7 cut(s)	19, 399, 749, 752, 1855, 1858, 2154
BstV2I	GAAGAC	1 cut(s)	128
BstX2I	RGATCY	2 cut(s)	1810, 1954
BstXI	CCANNNNNNTGG	1 cut(s)	1361
BstYI	RGATCY	2 cut(s)	1810, 1954
BstZ17I	GTATAC	1 cut(s)	1993
Bsu36I	CCTNAGG	1 cut(s)	2131
BsuI	GTATCC	1 cut(s)	121
BsuRI	GGCC	5 cut(s)	599, 704, 747, 1541, 1762
BtgI	CCRYGG	3 cut(s)	14, 1044, 2055
BtsCI	GGATG	1 cut(s)	764
BtsI	GCAGTG	1 cut(s)	1188
BtsIMutI	CAGTG	8 cut(s)	92, 570, 1188, 1288, 1757, 1990, 2097, 2116
Cac8I	GCNNGC	4 cut(s)	702, 745, 997, 1208
CfoI	GCGC	3 cut(s)	530, 987, 1018
Cfr10I	RCCGGY	3 cut(s)	79, 700, 1206
Cfr13I	GGNCC	2 cut(s)	199, 881
CseI	GACGC	1 cut(s)	928
Csp6I	GTAC	9 cut(s)	155, 806, 1157, 1557, 1609, 1624, 1679, 1716, 1880
CviAII	CATG	7 cut(s)	654, 944, 1045, 1229, 1361, 1442, 1893
CviQI	GTAC	9 cut(s)	155, 806, 1157, 1557, 1609, 1624, 1679, 1716, 1880
DdeI	CTNAG	4 cut(s)	1002, 1233, 1345, 2131
DpnI	GATC	5 cut(s)	674, 1077, 1503, 1812, 1956
DpnII	GATC	5 cut(s)	672, 1075, 1501, 1810, 1954
EaeI	YGGCCR	3 cut(s)	597, 702, 1539
EciI	GGCGGA	2 cut(s)	267, 396
Eco130I	CCWWGG	3 cut(s)	796, 876, 1044
Eco147I	AGGCCT	1 cut(s)	747
Eco31I	GGTCTC	1 cut(s)	24
Eco32I	GATATC	1 cut(s)	1477
Eco47I	GGWCC	2 cut(s)	199, 881
Eco47III	AGCGCT	1 cut(s)	529
Eco57I	CTGAAG	2 cut(s)	492, 2184
Eco81I	CCTNAGG	1 cut(s)	2131
Eco88I	CYCGRG	1 cut(s)	1587
EcoRI	GAATTC	3 cut(s)	1349, 2008, 2050
EcoRII	CCWGG	5 cut(s)	934, 1162, 1779, 1923, 1975
EcoRV	GATATC	1 cut(s)	1477
EcoT14I	CCWWGG	3 cut(s)	796, 876, 1044
ErhI	CCWWGG	3 cut(s)	796, 876, 1044
FaeI	CATG	7 cut(s)	657, 947, 1048, 1232, 1364, 1445, 1896
FaqI	GGGAC	1 cut(s)	894
FatI	CATG	7 cut(s)	653, 943, 1044, 1228, 1360, 1441, 1892
FauI	CCCGC	1 cut(s)	123
FbaI	TGATCA	1 cut(s)	1075
FblI	GTMKAC	1 cut(s)	1992
FokI	GGATG	1 cut(s)	771
FspBI	CTAG	7 cut(s)	132, 621, 1271, 1367, 1685, 1851, 2188
FspI	TGCGCA	1 cut(s)	1017
GlaI	GCGC	3 cut(s)	529, 986, 1017
GsuI	CTGGAG	1 cut(s)	1602
HaeII	RGCGCY	1 cut(s)	531
HaeIII	GGCC	5 cut(s)	599, 704, 747, 1541, 1762
HapII	CCGG	7 cut(s)	80, 701, 851, 1207, 1252, 1698, 2026
HgaI	GACGC	1 cut(s)	928
HhaI	GCGC	3 cut(s)	530, 987, 1018
Hin1I	GRCGYC	2 cut(s)	939, 1702
Hin1II	CATG	7 cut(s)	657, 947, 1048, 1232, 1364, 1445, 1896
Hin6I	GCGC	3 cut(s)	528, 985, 1016
HinP1I	GCGC	3 cut(s)	528, 985, 1016
HincII	GTYRAC	2 cut(s)	465, 1240
HindII	GTYRAC	2 cut(s)	465, 1240
HinfI	GANTC	3 cut(s)	443, 1724, 2078
HpaII	CCGG	7 cut(s)	80, 701, 851, 1207, 1252, 1698, 2026
Hpy166II	GTNNAC	7 cut(s)	157, 465, 1147, 1240, 1706, 1880, 1993
Hpy188I	TCNGA	7 cut(s)	720, 1003, 1108, 1506, 1528, 1657, 2164
Hpy188III	TCNNGA	5 cut(s)	303, 851, 1472, 1619, 2075
Hpy8I	GTNNAC	7 cut(s)	157, 465, 1147, 1240, 1706, 1880, 1993
HpyAV	CCTTC	8 cut(s)	36, 297, 318, 516, 624, 1127, 1165, 1928
HpyCH4III	ACNGT	7 cut(s)	69, 96, 690, 1292, 1378, 1985, 2059
HpyCH4IV	ACGT	1 cut(s)	1702
HpyCH4V	TGCA	5 cut(s)	712, 1181, 1258, 1421, 1452
HpyF10VI	GCNNNNNNNGC	7 cut(s)	616, 1216, 1264, 1799, 1868, 2142, 2151
HpyF3I	CTNAG	4 cut(s)	1002, 1233, 1345, 2131
HpySE526I	ACGT	1 cut(s)	1702
Hsp92I	GRCGYC	2 cut(s)	939, 1702
Hsp92II	CATG	7 cut(s)	657, 947, 1048, 1232, 1364, 1445, 1896
HspAI	GCGC	3 cut(s)	528, 985, 1016
Kpn2I	TCCGGA	1 cut(s)	850
KpnI	GGTACC	2 cut(s)	1560, 1612
KroI	GCCGGC	2 cut(s)	700, 1206
KroNI	GCCGGC	2 cut(s)	702, 1208
Ksp22I	TGATCA	1 cut(s)	1075
Kzo9I	GATC	5 cut(s)	672, 1075, 1501, 1810, 1954
LmnI	GCTCC	3 cut(s)	535, 1216, 1621
Lsp1109I	GCAGC	7 cut(s)	19, 399, 749, 752, 1855, 1858, 2154
LweI	GCATC	7 cut(s)	892, 1027, 1267, 1276, 1493, 1637, 1789
MaeI	CTAG	7 cut(s)	132, 621, 1271, 1367, 1685, 1851, 2188
MaeII	ACGT	1 cut(s)	1702
MaeIII	GTNAC	9 cut(s)	69, 96, 220, 244, 481, 1642, 1969, 2059, 2181
MalI	GATC	5 cut(s)	674, 1077, 1503, 1812, 1956
MboI	GATC	5 cut(s)	672, 1075, 1501, 1810, 1954
MboII	GAAGA	7 cut(s)	128, 866, 1457, 1796, 1949, 2051, 2059
MfeI	CAATTG	2 cut(s)	1079, 1996
MflI	RGATCY	2 cut(s)	1810, 1954
MhlI	GDGCHC	1 cut(s)	1290
MlsI	TGGCCA	2 cut(s)	599, 1541
MluCI	AATT	7 cut(s)	801, 1079, 1349, 1828, 1996, 2008, 2050
MluNI	TGGCCA	2 cut(s)	599, 1541
MlyI	GAGTC	2 cut(s)	437, 2087
MmeI	TCCRAC	4 cut(s)	226, 410, 458, 751
Mox20I	TGGCCA	2 cut(s)	599, 1541
MroI	TCCGGA	1 cut(s)	850
MroNI	GCCGGC	2 cut(s)	700, 1206
MscI	TGGCCA	2 cut(s)	599, 1541
MseI	TTAA	3 cut(s)	1193, 2124, 2169
MslI	CAYNNNNRTG	2 cut(s)	13, 1359
Msp20I	TGGCCA	2 cut(s)	599, 1541
MspA1I	CMGCKG	2 cut(s)	412, 995
MspI	CCGG	7 cut(s)	80, 701, 851, 1207, 1252, 1698, 2026
MspR9I	CCNGG	7 cut(s)	936, 1164, 1253, 1781, 1925, 1977, 2026
MunI	CAATTG	2 cut(s)	1079, 1996
MvaI	CCWGG	5 cut(s)	936, 1164, 1781, 1925, 1977
MwoI	GCNNNNNNNGC	7 cut(s)	616, 1216, 1264, 1799, 1868, 2142, 2151
NaeI	GCCGGC	2 cut(s)	702, 1208
NciI	CCSGG	2 cut(s)	1253, 2026
NcoI	CCATGG	1 cut(s)	1044
NdeII	GATC	5 cut(s)	672, 1075, 1501, 1810, 1954
NgoMIV	GCCGGC	2 cut(s)	700, 1206
NlaIII	CATG	7 cut(s)	657, 947, 1048, 1232, 1364, 1445, 1896
NlaIV	GGNNCC	4 cut(s)	882, 1558, 1610, 1812
NmuCI	GTSAC	6 cut(s)	69, 96, 220, 244, 481, 1642
NsbI	TGCGCA	1 cut(s)	1017
OliI	CACNNNNGTG	1 cut(s)	13
PaeR7I	CTCGAG	1 cut(s)	1587
PceI	AGGCCT	1 cut(s)	747
PdiI	GCCGGC	2 cut(s)	702, 1208
PfeI	GAWTC	1 cut(s)	1724
PflMI	CCANNNNNTGG	1 cut(s)	890
PleI	GAGTC	2 cut(s)	437, 2086
PpsI	GAGTC	2 cut(s)	437, 2086
PsiI	TTATAA	2 cut(s)	1694, 2019
Psp6I	CCWGG	5 cut(s)	934, 1162, 1779, 1923, 1975
PspGI	CCWGG	5 cut(s)	934, 1162, 1779, 1923, 1975
PspN4I	GGNNCC	4 cut(s)	882, 1558, 1610, 1812
PspPI	GGNCC	2 cut(s)	199, 881
PspXI	VCTCGAGB	1 cut(s)	1587
PsuI	RGATCY	2 cut(s)	1810, 1954
RsaI	GTAC	9 cut(s)	156, 807, 1158, 1558, 1610, 1625, 1680, 1717, 1881
RsaNI	GTAC	9 cut(s)	155, 806, 1157, 1557, 1609, 1624, 1679, 1716, 1880
RseI	CAYNNNNRTG	2 cut(s)	13, 1359
SaqAI	TTAA	3 cut(s)	1193, 2124, 2169
Sau3AI	GATC	5 cut(s)	672, 1075, 1501, 1810, 1954
Sau96I	GGNCC	2 cut(s)	199, 881
ScaI	AGTACT	1 cut(s)	1158
SchI	GAGTC	2 cut(s)	437, 2087
ScrFI	CCNGG	7 cut(s)	936, 1164, 1253, 1781, 1925, 1977, 2026
SduI	GDGCHC	1 cut(s)	1290
SfaNI	GCATC	7 cut(s)	892, 1027, 1267, 1276, 1493, 1637, 1789
Sfr274I	CTCGAG	1 cut(s)	1587
SinI	GGWCC	2 cut(s)	199, 881
SlaI	CTCGAG	1 cut(s)	1587
SmiMI	CAYNNNNRTG	2 cut(s)	13, 1359
SmlI	CTYRAG	3 cut(s)	1587, 1773, 2137
SmoI	CTYRAG	3 cut(s)	1587, 1773, 2137
SpeI	ACTAGT	1 cut(s)	131
Sse9I	AATT	7 cut(s)	801, 1079, 1349, 1828, 1996, 2008, 2050
SseBI	AGGCCT	1 cut(s)	747
SspI	AATATT	1 cut(s)	1492
SspMI	CTAG	7 cut(s)	132, 621, 1271, 1367, 1685, 1851, 2188
StuI	AGGCCT	1 cut(s)	747
StyD4I	CCNGG	7 cut(s)	934, 1162, 1251, 1779, 1923, 1975, 2024
StyI	CCWWGG	3 cut(s)	796, 876, 1044
TaaI	ACNGT	7 cut(s)	69, 96, 690, 1292, 1378, 1985, 2059
TaiI	ACGT	1 cut(s)	1705
TaqI	TCGA	2 cut(s)	1588, 1900
TasI	AATT	7 cut(s)	801, 1079, 1349, 1828, 1996, 2008, 2050
TatI	WGTACW	5 cut(s)	154, 805, 1156, 1678, 1715
TauI	GCSGC	3 cut(s)	91, 412, 995
TfiI	GAWTC	1 cut(s)	1724
Tru1I	TTAA	3 cut(s)	1193, 2124, 2169
Tru9I	TTAA	3 cut(s)	1193, 2124, 2169
TscAI	CASTG	8 cut(s)	99, 570, 1188, 1295, 1757, 1990, 2104, 2116
TseFI	GTSAC	6 cut(s)	69, 96, 220, 244, 481, 1642
TseI	GCWGC	7 cut(s)	32, 412, 737, 740, 1868, 1871, 2142
Tsp45I	GTSAC	6 cut(s)	69, 96, 220, 244, 481, 1642
TspDTI	ATGAA	6 cut(s)	1217, 1266, 1415, 1457, 1458, 1656
TspGWI	ACGGA	1 cut(s)	1686
TspRI	CASTG	8 cut(s)	99, 570, 1188, 1295, 1757, 1990, 2104, 2116
Van91I	CCANNNNNTGG	1 cut(s)	890
VpaK11BI	GGWCC	2 cut(s)	199, 881
XapI	RAATTY	3 cut(s)	1349, 2008, 2050
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1591
XhoI	CTCGAG	1 cut(s)	1587
XmiI	GTMKAC	1 cut(s)	1992
XspI	CTAG	7 cut(s)	132, 621, 1271, 1367, 1685, 1851, 2188
ZraI	GACGTC	1 cut(s)	1703
ZrmI	AGTACT	1 cut(s)	1158

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.