Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr6C

Orthogroup ID

OG0016478

Physical Location & Seq

Genomic Coordinates Forward (+)

64053358 .. 64056517

Gene Structure 3160 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh6CG468900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1962 bp

ATGTCTTCACCGCCGTGGTCTCTGCCTTCGGCTGCCGTTCCTGTCACCACACCACCACCACTTCCACCGTCACAGCCACCGGCATTGCCGCCACCATCGCCACAGACACCACCTTTTGTATCCCCGCTATTTCCACCTACTGGTCTTCCTGCCCTGCCTCCTGTACACAACTCTATCCCTCCTGTTTCCTCACCATTGCCATCTGTGGTCCAACCTCCACCCCCACCAGTCACCTCTCCACCACCGCCGTCTGTCACTTCTCCTCCTCCACCTTCACTAACCTTTCCGCCACCACCTTCACTACCGCCACCAACTCCATTGCCATCAAGACCTTCTCCACCTCCACAGCCTACATTATCACCACCACCATTACCAACACCAAAAACACCATATCTTTCTCCTCCAATCAAACCACTAACTTCTCCGCCGCTGCCACCACCCTCAACAACTCCAACCAACGACTCTCCACCACCTACATTGTCAACTCCCCTACCTCCGGTGACCACCACTACTCCTCCACCTCCTTTAGCCACTCCAAGCAACAGCGCTCCACCATCTGATTTAGCAACTCTGCTTCCACCAGTGGCCACCAGTCCTAAACCACCACCCACTTTGGCCAGAACTCTGCCACCTTCGCCTAGTACTGCTGTAACACCTTTGCCTGGTAATGCTGTAACACCTTTGCCTACAACAACATTGACACCACCTCCATTGATCCATTCACCATCACCGTCCTTATTGCCGGCCACCTTGCAAGTTCAGAAGCCACAGCCAAAAGCAGCAGCAGGCCTCGTAGCTGGATGTGTCATTGTTGGAGTTGTTGGAGTTTTCCTCCTCCTCGGAATTGTACTTATTTGCTACAAGCGTAGGAGTAGAAAGAACAACGCTATTCCGGAAGATTACTATAAACCACCCTCCTTGGGAAAAGATGGCTGTTACGATGCTGTTCAGCCCCATCACAATGTTCCTCAACCTGGCGTCCATGTTATCAGGGTGCTGTCCAGCACATCAACATCTCCAATGCGCCGTGCCGCTGGCTCTGAGGTTTTATATGCACATCAACCTCAATGGCTTGGTTTTCCCATGGACATCTCAAATGGAACATTCACCTATGATCAATTGTTGGTAGCAACAAATGGGTTTTCAGAGGCCAACCTTCTTGGACAAGGCGGTTTTGGGTATGTCCACAAGGGAGTACTTCCAGGTGGGAAGGAAGTTGCAGTGAAGCAGTTAAAGACAGGAAGCCGGCAAGGGGAGCGAGAGTTTCATGCTGAGGTTGACATCATTAGCCTGGTGCATCACAAGCATCTAGTTTCATTGGTAGGGCACTGTATCAAGGGGGCTGAGAGGTTGCTTGTATATGAGTTTGTTCCAAATAACACCTTAGAATTCCACTTACATGGATTAGGACAGACTGTTTTGGAGTGGGAAATAAGATTGAAAATAGCTACTGGCTCTGCAAAAGGACTAGCATATCTCCATGAAGATTGCAATCCAAAAATCATTCATCGTGATATCAAGGCATCTAATATTCTTGTGGATCAGAAGTTTGAAGCAAAAGTTTCTGACTTTGGACTGGCCAAATCGTTCTCTGGTACCAACACTCACATTACTCACCTTTCCACTCGAGTAGTGGGAACATTTGGGTACCTTGCTCCAGAGTACGCATCAAGCGGTAAGGTCACAGAGAAATCAGATGTGTATTCATACGGGGTTGTACTCCTAGAACTTATAACCGGACGTCCGCCTATCAGTACAATAGATTCCTTGAGGAATGAGGGTCTGGTTCAGTGGGCAAGGCCATTGCTCACTCAAGCCCTGGAAGATGTCAGCATGGCTTCGACCAAGAATGAGCTAGATAGTCCATGCTTTAGAAGGAGTTGCTTCGTTGATGGATCTTCGGGAAGGAGTTACACCAGGAAACAGTGCGGTATACAATTGCTTGGGGAATTCACATTATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004675 GO:0004888 GO:0005575 GO:0005623 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0007154 GO:0007165 GO:0007166 GO:0007167 GO:0007178 GO:0008150 GO:0008152 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019199 GO:0019538 GO:0023052 GO:0036211 GO:0038023 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0060089 GO:0065007 GO:0071704 GO:0071944 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Pkinase Pkinase_Tyr

Protein Analysis

653

Amino Acids

69.16

Weight (kDa)

9.02

Isoelectric Point (pI)

65.79

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Pkinase	PF00069	383 - 588	7.6e-44	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	385 - 589	3.7e-44	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Orthologous Genes (Group: OG0016478)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G32710
fragaria_vesca	FvH4_2g36150
malus_domestica	MD15G1098100.v1.1
prunus_persica	Prupe.1G452900_v2.0.a1 Prupe.1G452900_v2.0.a1
pyrus_communis	pycom15g08990
rosa_chinensis	RchiOBHm_Chr6g0305721
rosa_laevigata	RLG00000010865
rosa_multiflora	Rmu_sc0001809.1_g000037
rosa_roxburghii	Rroxscaffold_7G00162410
rosa_rugosa	Rorug06G0343500
rosa_samantha	Rh6BG446400 Rh6CG468900
rosa_wichuraiana	Rw6G039690

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	1733, 1960
AatII	GACGTC	1 cut(s)	1744
Acc65I	GGTACC	2 cut(s)	1595, 1647
AccB1I	GGYRCC	2 cut(s)	1595, 1647
AccB7I	CCANNNNNTGG	1 cut(s)	140
AccI	GTMKAC	1 cut(s)	1933
AccIII	TCCGGA	1 cut(s)	892
AclWI	GGATC	3 cut(s)	709, 1548, 1903
AcoI	YGGCCR	4 cut(s)	585, 615, 744, 1578
AcsI	RAATTY	2 cut(s)	1388, 1949
AcyI	GRCGYC	2 cut(s)	978, 1741
AfaI	GTAC	9 cut(s)	165, 643, 849, 1197, 1597, 1649, 1664, 1719, 1756
AfeI	AGCGCT	1 cut(s)	547
AfiI	CCNNNNNNNGG	6 cut(s)	140, 496, 662, 920, 974, 1252
AgsI	TTSAA	2 cut(s)	1441, 1553
AjnI	CCWGG	6 cut(s)	661, 973, 1201, 1290, 1818, 1916
AleI	CACNNNNGTG	1 cut(s)	13
AluBI	AGCT	3 cut(s)	797, 1448, 1855
AluI	AGCT	3 cut(s)	797, 1448, 1855
Alw26I	GTCTC	1 cut(s)	24
AlwI	GGATC	3 cut(s)	709, 1548, 1903
Ama87I	CYCGRG	1 cut(s)	1626
Aor13HI	TCCGGA	1 cut(s)	892
Aor51HI	AGCGCT	1 cut(s)	547
AoxI	GGCC	7 cut(s)	585, 615, 744, 787, 1149, 1578, 1799
ApeKI	GCWGC	4 cut(s)	32, 430, 779, 782
ApoI	RAATTY	2 cut(s)	1388, 1949
Asp718I	GGTACC	2 cut(s)	1595, 1647
AspLEI	GCGC	2 cut(s)	548, 1026
AspS9I	GGNCC	1 cut(s)	208
AsuHPI	GGTGA	9 cut(s)	37, 183, 223, 351, 511, 714, 720, 1099, 1607
AvaI	CYCGRG	1 cut(s)	1626
AvaII	GGWCC	1 cut(s)	208
BaeGI	GKGCMC	1 cut(s)	1329
BalI	TGGCCA	3 cut(s)	587, 617, 1580
BanI	GGYRCC	2 cut(s)	1595, 1647
BbsI	GAAGAC	1 cut(s)	137
BbvCI	CCTCAGC	1 cut(s)	1272
BbvI	GCAGC	4 cut(s)	19, 417, 791, 794
BccI	CCATC	8 cut(s)	103, 208, 331, 562, 733, 923, 963, 1886
BceAI	ACGGC	3 cut(s)	20, 232, 1011
BciT130I	CCWGG	6 cut(s)	663, 975, 1203, 1292, 1820, 1918
BciVI	GTATCC	1 cut(s)	130
BclI	TGATCA	1 cut(s)	1114
BcoDI	GTCTC	1 cut(s)	24
BfaI	CTAG	5 cut(s)	639, 1310, 1469, 1724, 1856
BfoI	RGCGCY	1 cut(s)	549
BfuI	GTATCC	1 cut(s)	130
BisI	GCNGC	7 cut(s)	33, 89, 428, 431, 780, 783, 1032
BlsI	GCNGC	7 cut(s)	34, 90, 429, 432, 781, 784, 1033
BmcAI	AGTACT	2 cut(s)	643, 1197
Bme1390I	CCNGG	6 cut(s)	663, 975, 1203, 1292, 1820, 1918
Bme18I	GGWCC	1 cut(s)	208
BmeT110I	CYCGRG	1 cut(s)	1626
BmgT120I	GGNCC	1 cut(s)	208
BmiI	GGNNCC	2 cut(s)	1597, 1649
BmrFI	CCNGG	6 cut(s)	663, 975, 1203, 1292, 1820, 1918
BmsI	GCATC	5 cut(s)	931, 1306, 1315, 1532, 1676
BpiI	GAAGAC	1 cut(s)	137
BplI	GAGNNNNNCTC	2 cut(s)	816, 848
BpmI	CTGGAG	1 cut(s)	1641
Bpu10I	CCTNAGC	1 cut(s)	1272
BpuEI	CTTGAG	2 cut(s)	1789, 1797
BsaBI	GATNNNNATC	1 cut(s)	1491
BsaHI	GRCGYC	2 cut(s)	978, 1741
BsaI	GGTCTC	1 cut(s)	24
BsaJI	CCNNGG	5 cut(s)	14, 838, 918, 1083, 1818
BsaWI	WCCGGW	3 cut(s)	496, 892, 1736
Bsc4I	CCNNNNNNNGG	6 cut(s)	140, 496, 662, 920, 974, 1252
Bse118I	RCCGGY	3 cut(s)	79, 742, 1245
Bse1I	ACTGG	6 cut(s)	145, 227, 581, 591, 1456, 1581
Bse3DI	GCAATG	4 cut(s)	83, 194, 317, 1802
Bse8I	GATNNNNATC	1 cut(s)	1491
BseAI	TCCGGA	1 cut(s)	892
BseBI	CCWGG	6 cut(s)	663, 975, 1203, 1292, 1820, 1918
BseDI	CCNNGG	5 cut(s)	14, 838, 918, 1083, 1818
BseGI	GGATG	1 cut(s)	806
BseJI	GATNNNNATC	1 cut(s)	1491
BseLI	CCNNNNNNNGG	6 cut(s)	140, 496, 662, 920, 974, 1252
BseMI	GCAATG	4 cut(s)	83, 194, 317, 1802
BseMII	CTCAG	3 cut(s)	1032, 1263, 1335
BseNI	ACTGG	6 cut(s)	145, 227, 581, 591, 1456, 1581
BseRI	GAGGAG	6 cut(s)	252, 255, 390, 504, 824, 827
BseSI	GKGCMC	1 cut(s)	1329
BseXI	GCAGC	4 cut(s)	19, 417, 791, 794
BshFI	GGCC	7 cut(s)	587, 617, 746, 789, 1151, 1580, 1801
BshNI	GGYRCC	2 cut(s)	1595, 1647
BsiHKCI	CYCGRG	1 cut(s)	1626
BsiSI	CCGG	6 cut(s)	80, 497, 743, 893, 1246, 1737
BslI	CCNNNNNNNGG	6 cut(s)	140, 496, 662, 920, 974, 1252
BsmAI	GTCTC	1 cut(s)	24
BsnI	GGCC	7 cut(s)	587, 617, 746, 789, 1151, 1580, 1801
Bso31I	GGTCTC	1 cut(s)	24
BsoBI	CYCGRG	1 cut(s)	1626
Bsp1286I	GDGCHC	1 cut(s)	1329
Bsp13I	TCCGGA	1 cut(s)	892
Bsp1407I	TGTACA	1 cut(s)	163
Bsp143I	GATC	4 cut(s)	714, 1114, 1540, 1895
Bsp19I	CCATGG	1 cut(s)	1083
BspANI	GGCC	7 cut(s)	587, 617, 746, 789, 1151, 1580, 1801
BspCNI	CTCAG	3 cut(s)	1033, 1264, 1336
BspEI	TCCGGA	1 cut(s)	892
BspLI	GGNNCC	2 cut(s)	1597, 1649
BspPI	GGATC	3 cut(s)	709, 1548, 1903
BspT107I	GGYRCC	2 cut(s)	1595, 1647
BspTNI	GGTCTC	1 cut(s)	24
BsrDI	GCAATG	4 cut(s)	83, 194, 317, 1802
BsrFI	RCCGGY	3 cut(s)	79, 742, 1245
BsrGI	TGTACA	1 cut(s)	163
BsrI	ACTGG	6 cut(s)	145, 227, 581, 591, 1456, 1581
BssAI	RCCGGY	3 cut(s)	79, 742, 1245
BssECI	CCNNGG	5 cut(s)	14, 838, 918, 1083, 1818
BssMI	GATC	4 cut(s)	714, 1114, 1540, 1895
BssNAI	GTATAC	1 cut(s)	1934
BssNI	GRCGYC	2 cut(s)	978, 1741
BssT1I	CCWWGG	2 cut(s)	918, 1083
Bst1107I	GTATAC	1 cut(s)	1934
Bst2UI	CCWGG	6 cut(s)	663, 975, 1203, 1292, 1820, 1918
Bst4CI	ACNGT	5 cut(s)	69, 732, 1331, 1417, 1926
BstACI	GRCGYC	2 cut(s)	978, 1741
BstAUI	TGTACA	1 cut(s)	163
BstC8I	GCNNGC	4 cut(s)	744, 787, 1036, 1247
BstDEI	CTNAG	4 cut(s)	1041, 1272, 1344, 1384
BstDSI	CCRYGG	2 cut(s)	14, 1083
BstEII	GGTNACC	1 cut(s)	499
BstF5I	GGATG	1 cut(s)	806
BstH2I	RGCGCY	1 cut(s)	549
BstHHI	GCGC	2 cut(s)	548, 1026
BstKTI	GATC	4 cut(s)	717, 1117, 1543, 1898
BstMAI	GTCTC	1 cut(s)	24
BstMBI	GATC	4 cut(s)	714, 1114, 1540, 1895
BstMWI	GCNNNNNNNGC	4 cut(s)	97, 634, 1255, 1303
BstNI	CCWGG	6 cut(s)	663, 975, 1203, 1292, 1820, 1918
BstPI	GGTNACC	1 cut(s)	499
BstSCI	CCNGG	6 cut(s)	661, 973, 1201, 1290, 1818, 1916
BstSLI	GKGCMC	1 cut(s)	1329
BstV1I	GCAGC	4 cut(s)	19, 417, 791, 794
BstV2I	GAAGAC	1 cut(s)	137
BstX2I	RGATCY	1 cut(s)	1895
BstXI	CCANNNNNNTGG	1 cut(s)	1400
BstYI	RGATCY	1 cut(s)	1895
BstZ17I	GTATAC	1 cut(s)	1934
BsuI	GTATCC	1 cut(s)	130
BsuRI	GGCC	7 cut(s)	587, 617, 746, 789, 1151, 1580, 1801
BtgI	CCRYGG	2 cut(s)	14, 1083
BtgZI	GCGATG	1 cut(s)	81
BtsCI	GGATG	1 cut(s)	806
BtsI	GCAGTG	1 cut(s)	1227
BtsIMutI	CAGTG	5 cut(s)	588, 1227, 1327, 1796, 1931
Cac8I	GCNNGC	4 cut(s)	744, 787, 1036, 1247
CfoI	GCGC	2 cut(s)	548, 1026
Cfr10I	RCCGGY	3 cut(s)	79, 742, 1245
Cfr13I	GGNCC	1 cut(s)	208
CseI	GACGC	1 cut(s)	967
Csp6I	GTAC	9 cut(s)	164, 642, 848, 1196, 1596, 1648, 1663, 1718, 1755
CviAII	CATG	7 cut(s)	983, 1084, 1268, 1400, 1481, 1834, 1866
CviQI	GTAC	9 cut(s)	164, 642, 848, 1196, 1596, 1648, 1663, 1718, 1755
DdeI	CTNAG	4 cut(s)	1041, 1272, 1344, 1384
DpnI	GATC	4 cut(s)	716, 1116, 1542, 1897
DpnII	GATC	4 cut(s)	714, 1114, 1540, 1895
EaeI	YGGCCR	4 cut(s)	585, 615, 744, 1578
EciI	GGCGGA	3 cut(s)	276, 414, 1734
Eco130I	CCWWGG	2 cut(s)	918, 1083
Eco147I	AGGCCT	1 cut(s)	789
Eco31I	GGTCTC	1 cut(s)	24
Eco32I	GATATC	1 cut(s)	1516
Eco47I	GGWCC	1 cut(s)	208
Eco47III	AGCGCT	1 cut(s)	547
Eco88I	CYCGRG	1 cut(s)	1626
Eco91I	GGTNACC	1 cut(s)	499
EcoO65I	GGTNACC	1 cut(s)	499
EcoRI	GAATTC	2 cut(s)	1388, 1949
EcoRII	CCWGG	6 cut(s)	661, 973, 1201, 1290, 1818, 1916
EcoRV	GATATC	1 cut(s)	1516
EcoT14I	CCWWGG	2 cut(s)	918, 1083
ErhI	CCWWGG	2 cut(s)	918, 1083
FaeI	CATG	7 cut(s)	986, 1087, 1271, 1403, 1484, 1837, 1869
FatI	CATG	7 cut(s)	982, 1083, 1267, 1399, 1480, 1833, 1865
FauI	CCCGC	1 cut(s)	132
FbaI	TGATCA	1 cut(s)	1114
FblI	GTMKAC	1 cut(s)	1933
Fnu4HI	GCNGC	7 cut(s)	33, 89, 428, 431, 780, 783, 1032
FokI	GGATG	1 cut(s)	813
Fsp4HI	GCNGC	7 cut(s)	33, 89, 428, 431, 780, 783, 1032
FspBI	CTAG	5 cut(s)	639, 1310, 1469, 1724, 1856
GlaI	GCGC	2 cut(s)	547, 1025
GluI	GCNGC	7 cut(s)	33, 89, 428, 431, 780, 783, 1032
GsuI	CTGGAG	1 cut(s)	1641
HaeII	RGCGCY	1 cut(s)	549
HaeIII	GGCC	7 cut(s)	587, 617, 746, 789, 1151, 1580, 1801
HapII	CCGG	6 cut(s)	80, 497, 743, 893, 1246, 1737
HgaI	GACGC	1 cut(s)	967
HhaI	GCGC	2 cut(s)	548, 1026
Hin1I	GRCGYC	2 cut(s)	978, 1741
Hin1II	CATG	7 cut(s)	986, 1087, 1271, 1403, 1484, 1837, 1869
Hin6I	GCGC	2 cut(s)	546, 1024
HinP1I	GCGC	2 cut(s)	546, 1024
HincII	GTYRAC	2 cut(s)	483, 1279
HindII	GTYRAC	2 cut(s)	483, 1279
HinfI	GANTC	2 cut(s)	461, 1763
HpaII	CCGG	6 cut(s)	80, 497, 743, 893, 1246, 1737
HphI	GGTGA	9 cut(s)	37, 183, 223, 351, 511, 714, 720, 1099, 1607
Hpy166II	GTNNAC	5 cut(s)	166, 483, 1186, 1279, 1934
Hpy188I	TCNGA	8 cut(s)	559, 762, 842, 1042, 1147, 1545, 1567, 1696
Hpy188III	TCNNGA	5 cut(s)	327, 893, 1511, 1658, 1902
Hpy8I	GTNNAC	5 cut(s)	166, 483, 1186, 1279, 1934
HpyAV	CCTTC	9 cut(s)	36, 282, 306, 342, 642, 1166, 1204, 1869, 1899
HpyCH4III	ACNGT	5 cut(s)	69, 732, 1331, 1417, 1926
HpyCH4IV	ACGT	1 cut(s)	1741
HpyCH4V	TGCA	6 cut(s)	754, 1055, 1220, 1297, 1460, 1491
HpyF10VI	GCNNNNNNNGC	4 cut(s)	97, 634, 1255, 1303
HpyF3I	CTNAG	4 cut(s)	1041, 1272, 1344, 1384
HpySE526I	ACGT	1 cut(s)	1741
Hsp92I	GRCGYC	2 cut(s)	978, 1741
Hsp92II	CATG	7 cut(s)	986, 1087, 1271, 1403, 1484, 1837, 1869
HspAI	GCGC	2 cut(s)	546, 1024
Kpn2I	TCCGGA	1 cut(s)	892
KpnI	GGTACC	2 cut(s)	1599, 1651
KroI	GCCGGC	2 cut(s)	742, 1245
KroNI	GCCGGC	2 cut(s)	744, 1247
Ksp22I	TGATCA	1 cut(s)	1114
Kzo9I	GATC	4 cut(s)	714, 1114, 1540, 1895
LmnI	GCTCC	3 cut(s)	553, 1255, 1660
Lsp1109I	GCAGC	4 cut(s)	19, 417, 791, 794
LweI	GCATC	5 cut(s)	931, 1306, 1315, 1532, 1676
MaeI	CTAG	5 cut(s)	639, 1310, 1469, 1724, 1856
MaeII	ACGT	1 cut(s)	1741
MalI	GATC	4 cut(s)	716, 1116, 1542, 1897
MboI	GATC	4 cut(s)	714, 1114, 1540, 1895
MboII	GAAGA	5 cut(s)	137, 908, 1496, 1835, 1890
MfeI	CAATTG	2 cut(s)	1118, 1937
MflI	RGATCY	1 cut(s)	1895
MhlI	GDGCHC	1 cut(s)	1329
MlsI	TGGCCA	3 cut(s)	587, 617, 1580
MluCI	AATT	5 cut(s)	843, 1118, 1388, 1937, 1949
MluNI	TGGCCA	3 cut(s)	587, 617, 1580
MlyI	GAGTC	1 cut(s)	455
MmeI	TCCRAC	4 cut(s)	235, 476, 793, 802
Mox20I	TGGCCA	3 cut(s)	587, 617, 1580
MroI	TCCGGA	1 cut(s)	892
MroNI	GCCGGC	2 cut(s)	742, 1245
MscI	TGGCCA	3 cut(s)	587, 617, 1580
MseI	TTAA	1 cut(s)	1232
MslI	CAYNNNNRTG	3 cut(s)	13, 960, 1398
Msp20I	TGGCCA	3 cut(s)	587, 617, 1580
MspA1I	CMGCKG	2 cut(s)	430, 1034
MspI	CCGG	6 cut(s)	80, 497, 743, 893, 1246, 1737
MspR9I	CCNGG	6 cut(s)	663, 975, 1203, 1292, 1820, 1918
MunI	CAATTG	2 cut(s)	1118, 1937
MvaI	CCWGG	6 cut(s)	663, 975, 1203, 1292, 1820, 1918
MwoI	GCNNNNNNNGC	4 cut(s)	97, 634, 1255, 1303
NaeI	GCCGGC	2 cut(s)	744, 1247
NcoI	CCATGG	1 cut(s)	1083
NdeII	GATC	4 cut(s)	714, 1114, 1540, 1895
NgoMIV	GCCGGC	2 cut(s)	742, 1245
NlaIII	CATG	7 cut(s)	986, 1087, 1271, 1403, 1484, 1837, 1869
NlaIV	GGNNCC	2 cut(s)	1597, 1649
NmuCI	GTSAC	6 cut(s)	43, 69, 229, 253, 499, 1681
OliI	CACNNNNGTG	1 cut(s)	13
PaeR7I	CTCGAG	1 cut(s)	1626
PceI	AGGCCT	1 cut(s)	789
PdiI	GCCGGC	2 cut(s)	744, 1247
PfeI	GAWTC	1 cut(s)	1763
PflMI	CCANNNNNTGG	1 cut(s)	140
PkrI	GCNGC	7 cut(s)	34, 90, 429, 432, 781, 784, 1033
PleI	GAGTC	1 cut(s)	455
PpsI	GAGTC	1 cut(s)	455
PsiI	TTATAA	2 cut(s)	1733, 1960
Psp6I	CCWGG	6 cut(s)	661, 973, 1201, 1290, 1818, 1916
PspEI	GGTNACC	1 cut(s)	499
PspGI	CCWGG	6 cut(s)	661, 973, 1201, 1290, 1818, 1916
PspN4I	GGNNCC	2 cut(s)	1597, 1649
PspPI	GGNCC	1 cut(s)	208
PspXI	VCTCGAGB	1 cut(s)	1626
PsuI	RGATCY	1 cut(s)	1895
RsaI	GTAC	9 cut(s)	165, 643, 849, 1197, 1597, 1649, 1664, 1719, 1756
RsaNI	GTAC	9 cut(s)	164, 642, 848, 1196, 1596, 1648, 1663, 1718, 1755
RseI	CAYNNNNRTG	3 cut(s)	13, 960, 1398
SaqAI	TTAA	1 cut(s)	1232
SatI	GCNGC	7 cut(s)	33, 89, 428, 431, 780, 783, 1032
Sau3AI	GATC	4 cut(s)	714, 1114, 1540, 1895
Sau96I	GGNCC	1 cut(s)	208
ScaI	AGTACT	2 cut(s)	643, 1197
SchI	GAGTC	1 cut(s)	455
ScrFI	CCNGG	6 cut(s)	663, 975, 1203, 1292, 1820, 1918
SduI	GDGCHC	1 cut(s)	1329
SfaNI	GCATC	5 cut(s)	931, 1306, 1315, 1532, 1676
Sfr274I	CTCGAG	1 cut(s)	1626
SinI	GGWCC	1 cut(s)	208
SlaI	CTCGAG	1 cut(s)	1626
SmiMI	CAYNNNNRTG	3 cut(s)	13, 960, 1398
SmlI	CTYRAG	3 cut(s)	1626, 1768, 1812
SmoI	CTYRAG	3 cut(s)	1626, 1768, 1812
Sse9I	AATT	5 cut(s)	843, 1118, 1388, 1937, 1949
SseBI	AGGCCT	1 cut(s)	789
SspI	AATATT	1 cut(s)	1531
SspMI	CTAG	5 cut(s)	639, 1310, 1469, 1724, 1856
StuI	AGGCCT	1 cut(s)	789
StyD4I	CCNGG	6 cut(s)	661, 973, 1201, 1290, 1818, 1916
StyI	CCWWGG	2 cut(s)	918, 1083
TaaI	ACNGT	5 cut(s)	69, 732, 1331, 1417, 1926
TaiI	ACGT	1 cut(s)	1744
TaqI	TCGA	2 cut(s)	1627, 1841
TasI	AATT	5 cut(s)	843, 1118, 1388, 1937, 1949
TatI	WGTACW	6 cut(s)	163, 641, 847, 1195, 1717, 1754
TauI	GCSGC	3 cut(s)	91, 430, 1034
TfiI	GAWTC	1 cut(s)	1763
Tru1I	TTAA	1 cut(s)	1232
Tru9I	TTAA	1 cut(s)	1232
TscAI	CASTG	5 cut(s)	588, 1227, 1334, 1796, 1931
TseFI	GTSAC	6 cut(s)	43, 69, 229, 253, 499, 1681
TseI	GCWGC	4 cut(s)	32, 430, 779, 782
Tsp45I	GTSAC	6 cut(s)	43, 69, 229, 253, 499, 1681
TspDTI	ATGAA	5 cut(s)	1256, 1305, 1496, 1497, 1695
TspRI	CASTG	5 cut(s)	588, 1227, 1334, 1796, 1931
Van91I	CCANNNNNTGG	1 cut(s)	140
VpaK11BI	GGWCC	1 cut(s)	208
XapI	RAATTY	2 cut(s)	1388, 1949
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1630
XhoI	CTCGAG	1 cut(s)	1626
XmiI	GTMKAC	1 cut(s)	1933
XspI	CTAG	5 cut(s)	639, 1310, 1469, 1724, 1856
ZraI	GACGTC	1 cut(s)	1742
ZrmI	AGTACT	2 cut(s)	643, 1197

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.