Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0001809.1

Orthogroup ID

OG0016478

Physical Location & Seq

Genomic Coordinates Forward (+)

166492 .. 169771

Gene Structure 3280 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0001809.1_g000037.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2190 bp

atgtcttcaccgccgtggtctctgccttcggctgccgttcctgtcaccacaccaccaccacttccaccgtcacagccaccggcattgcctccaccatcgccacagtcaccaccttttgtatccccgctatttccacctactagtcttcctgccctgcctccggtacacaactctatccctcctgtttcctcaccattgccatctgtggtccaacctccacccccaccagtcacctctccaccaccgccgtctgtcacttctcctcctccaccttcactaacctttccgccaccaccttcactaccgccaccaactccattgccatcaagaccttctccacctccacctccacagcctacattatcaccaccaccattaccaacaccaaaaacaccttatctttctcctccaatcaaaccactaacttctccgccgctgccaccaccctcaacaactccaaccaacgactctccaccacctacattgtcaactcccctacctccggtgaccaccactactcctccacctcctttagccactccaggcaacagcgctccaccacctgatttagcaactctgcttccaccagtggccaccagtcctaaaccaccacccactttggccagaactctgccaccttcgcctagtaatgctgtaacacctttgcctacaacaacattgacaccacctccattgatccattcaccatcaccgtccttattgccggccaccttgcaagttcagaagccacagccaaaagcagcagcaggcctcgtagctggatgtgtcattgttggagttgttgtagttttcctcctcctcggaattgtacttattttctataagcgtaggagtagaaagaacaacgctattccggaagattactataaaccaccctccttgggaccaaaagatggctgttatgatgcggttcagccccatcacaatgttcctcaacctggcgtccatgttatcagggtgctgtccagcacatcgacatctccaatgcgccgtgccgctggctctgaggttttatatgcacatcaacctcaatggcttggttttcccatggacatctcaaatggaacattcacctatgatcaattgttggtagcaacaaatgggttttcagaggccaaccttcttggacaaggcggttttgggtatgtccacaagggagtacttccaggtgggaaggaagttgcagtgaagcagttaaagacaggaagccggcaaggggagcgagagtttcatgctgaggttgacatcattagccgggtgcatcacaagcatctagtttcattggtagggcactgtatcaagggggctgagaggttgcttgtatatgagtttgttccaaataacaccttagaattccacctacatggattaggacagactgttttggagtgggaaataagattgaaaatagctactggctctgcaaaaggactagcatatctccatgaagattgcaatccaaaaattattcatcgtgatatcaaggcatctaatattcttgtggatcagaaatttgaagcaaaggtttctgactttggactggccaaatcgttctctggtaccaacactcacattactcacctttccactcgagtagtgggaacatttgggtaccttgctccagagtatgcatcaagcggtaaggtcacggagaaatcagatgtgtattcatacggggttgtactcctagaacttataaccggacgtccgcctataagtacaatagattccttgaggaatgagggtctggttcagtgggcaaggccattgctcactcaagccctggaagatggtgcttttgatgctcttgtggatccacgattggagacaaattacaagaagaatgagatggctagaatggtcacttgtgctgctgcgtgtgttcgacattcagcatggcttcgaccaagaatgagccagatagtccatgctttagaaggagttgcttcgttgatggatcttcaggaaggagttacaccaggaaacagtgcggtatacaattgcttggggaatgcacactataactcccggcaatatgaggaagatttgaagaattccacggtaacaatgccaagtcaagagtatggcattagtagatacactgcaactaccagcgagtatggtcttaatccctcaagctcaagcagcgaaacccggcaaacaatctga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004675 GO:0004888 GO:0005575 GO:0005623 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0007154 GO:0007165 GO:0007166 GO:0007167 GO:0007178 GO:0008150 GO:0008152 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019199 GO:0019538 GO:0023052 GO:0036211 GO:0038023 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0060089 GO:0065007 GO:0071704 GO:0071944 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Pkinase Pkinase_Tyr

Protein Analysis

729

Amino Acids

77.77

Weight (kDa)

8.75

Isoelectric Point (pI)

65.57

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0016478)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G32710
fragaria_vesca	FvH4_2g36150
malus_domestica	MD15G1098100.v1.1
prunus_persica	Prupe.1G452900_v2.0.a1 Prupe.1G452900_v2.0.a1
pyrus_communis	pycom15g08990
rosa_chinensis	RchiOBHm_Chr6g0305721
rosa_laevigata	RLG00000010865
rosa_multiflora	Rmu_sc0001809.1_g000037
rosa_roxburghii	Rroxscaffold_7G00162410
rosa_rugosa	Rorug06G0343500
rosa_samantha	Rh6BG446400 Rh6CG468900
rosa_wichuraiana	Rw6G039690

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1718
AatII	GACGTC	1 cut(s)	1729
Acc65I	GGTACC	2 cut(s)	1580, 1632
AccB1I	GGYRCC	2 cut(s)	1580, 1632
AccB7I	CCANNNNNTGG	1 cut(s)	914
AccI	GTMKAC	1 cut(s)	2016
AccIII	TCCGGA	1 cut(s)	874
AclWI	GGATC	5 cut(s)	691, 1533, 1829, 1842, 1986
AcoI	YGGCCR	4 cut(s)	591, 621, 726, 1563
AcsI	RAATTY	3 cut(s)	1373, 1532, 2074
AcuI	CTGAAG	1 cut(s)	1967
AcyI	GRCGYC	2 cut(s)	963, 1726
AfaI	GTAC	7 cut(s)	165, 831, 1182, 1582, 1634, 1704, 1741
AfeI	AGCGCT	1 cut(s)	553
AfiI	CCNNNNNNNGG	6 cut(s)	160, 502, 902, 914, 959, 1237
AgsI	TTSAA	3 cut(s)	1426, 1538, 2071
AhlI	ACTAGT	1 cut(s)	140
AjnI	CCWGG	5 cut(s)	541, 958, 1186, 1803, 1999
AleI	CACNNNNGTG	1 cut(s)	13
AluBI	AGCT	3 cut(s)	779, 1433, 2160
AluI	AGCT	3 cut(s)	779, 1433, 2160
Alw26I	GTCTC	2 cut(s)	24, 1841
AlwI	GGATC	5 cut(s)	691, 1533, 1829, 1842, 1986
Ama87I	CYCGRG	1 cut(s)	1611
Aor13HI	TCCGGA	1 cut(s)	874
Aor51HI	AGCGCT	1 cut(s)	553
AoxI	GGCC	7 cut(s)	591, 621, 726, 769, 1134, 1563, 1784
ApeKI	GCWGC	7 cut(s)	32, 436, 761, 764, 1892, 1895, 2166
ApoI	RAATTY	3 cut(s)	1373, 1532, 2074
Asp718I	GGTACC	2 cut(s)	1580, 1632
AspLEI	GCGC	2 cut(s)	554, 1011
AspS9I	GGNCC	2 cut(s)	208, 905
AsuC2I	CCSGG	3 cut(s)	1277, 2050, 2176
AvaI	CYCGRG	1 cut(s)	1611
AvaII	GGWCC	2 cut(s)	208, 905
BaeGI	GKGCMC	1 cut(s)	1314
BalI	TGGCCA	3 cut(s)	593, 623, 1565
BamHI	GGATCC	1 cut(s)	1834
BanI	GGYRCC	2 cut(s)	1580, 1632
BbsI	GAAGAC	1 cut(s)	137
BbvCI	CCTCAGC	1 cut(s)	1257
BbvI	GCAGC	7 cut(s)	19, 423, 773, 776, 1879, 1882, 2178
BccI	CCATC	9 cut(s)	103, 208, 331, 715, 908, 948, 1805, 1864, 1969
BceAI	ACGGC	3 cut(s)	20, 232, 996
BciT130I	CCWGG	5 cut(s)	543, 960, 1188, 1805, 2001
BciVI	GTATCC	1 cut(s)	130
BclI	TGATCA	1 cut(s)	1099
BcnI	CCSGG	3 cut(s)	1277, 2050, 2176
BcoDI	GTCTC	2 cut(s)	24, 1841
BcuI	ACTAGT	1 cut(s)	140
BfaI	CTAG	6 cut(s)	141, 645, 1295, 1454, 1709, 1875
BfoI	RGCGCY	1 cut(s)	555
BfuI	GTATCC	1 cut(s)	130
BisI	GCNGC	9 cut(s)	33, 434, 437, 762, 765, 1017, 1893, 1896, 2167
BlsI	GCNGC	9 cut(s)	34, 435, 438, 763, 766, 1018, 1894, 1897, 2168
BmcAI	AGTACT	1 cut(s)	1182
Bme1390I	CCNGG	8 cut(s)	543, 960, 1188, 1277, 1805, 2001, 2050, 2176
Bme18I	GGWCC	2 cut(s)	208, 905
BmeT110I	CYCGRG	1 cut(s)	1611
BmgT120I	GGNCC	2 cut(s)	208, 905
BmiI	GGNNCC	4 cut(s)	906, 1582, 1634, 1836
BmrFI	CCNGG	8 cut(s)	543, 960, 1188, 1277, 1805, 2001, 2050, 2176
BmsI	GCATC	6 cut(s)	916, 1291, 1300, 1517, 1661, 1813
BpiI	GAAGAC	1 cut(s)	137
BpmI	CTGGAG	2 cut(s)	525, 1626
Bpu10I	CCTNAGC	1 cut(s)	1257
BpuEI	CTTGAG	4 cut(s)	1774, 1782, 2140, 2146
BpuMI	CCSGG	3 cut(s)	1277, 2050, 2176
BsaBI	GATNNNNATC	1 cut(s)	1476
BsaHI	GRCGYC	2 cut(s)	963, 1726
BsaI	GGTCTC	1 cut(s)	24
BsaJI	CCNNGG	6 cut(s)	14, 820, 900, 1068, 1803, 2079
BsaWI	WCCGGW	4 cut(s)	160, 502, 874, 1721
Bsc4I	CCNNNNNNNGG	6 cut(s)	160, 502, 902, 914, 959, 1237
Bse118I	RCCGGY	3 cut(s)	79, 724, 1230
Bse1I	ACTGG	5 cut(s)	227, 587, 597, 1441, 1566
Bse3DI	GCAATG	4 cut(s)	83, 194, 317, 1787
Bse8I	GATNNNNATC	1 cut(s)	1476
BseAI	TCCGGA	1 cut(s)	874
BseBI	CCWGG	5 cut(s)	543, 960, 1188, 1805, 2001
BseDI	CCNNGG	6 cut(s)	14, 820, 900, 1068, 1803, 2079
BseGI	GGATG	1 cut(s)	788
BseJI	GATNNNNATC	1 cut(s)	1476
BseLI	CCNNNNNNNGG	6 cut(s)	160, 502, 902, 914, 959, 1237
BseMI	GCAATG	4 cut(s)	83, 194, 317, 1787
BseMII	CTCAG	3 cut(s)	1017, 1248, 1320
BseNI	ACTGG	5 cut(s)	227, 587, 597, 1441, 1566
BseRI	GAGGAG	6 cut(s)	252, 255, 396, 510, 806, 809
BseSI	GKGCMC	1 cut(s)	1314
BseXI	GCAGC	7 cut(s)	19, 423, 773, 776, 1879, 1882, 2178
BshFI	GGCC	7 cut(s)	593, 623, 728, 771, 1136, 1565, 1786
BshNI	GGYRCC	2 cut(s)	1580, 1632
BsiHKCI	CYCGRG	1 cut(s)	1611
BslFI	GGGAC	1 cut(s)	918
BslI	CCNNNNNNNGG	6 cut(s)	160, 502, 902, 914, 959, 1237
BsmAI	GTCTC	2 cut(s)	24, 1841
BsmFI	GGGAC	1 cut(s)	918
BsmI	GAATGC	1 cut(s)	2038
BsnI	GGCC	7 cut(s)	593, 623, 728, 771, 1136, 1565, 1786
Bso31I	GGTCTC	1 cut(s)	24
BsoBI	CYCGRG	1 cut(s)	1611
Bsp1286I	GDGCHC	1 cut(s)	1314
Bsp13I	TCCGGA	1 cut(s)	874
Bsp143I	GATC	5 cut(s)	696, 1099, 1525, 1834, 1978
Bsp19I	CCATGG	1 cut(s)	1068
BspANI	GGCC	7 cut(s)	593, 623, 728, 771, 1136, 1565, 1786
BspCNI	CTCAG	3 cut(s)	1018, 1249, 1321
BspEI	TCCGGA	1 cut(s)	874
BspLI	GGNNCC	4 cut(s)	906, 1582, 1634, 1836
BspPI	GGATC	5 cut(s)	691, 1533, 1829, 1842, 1986
BspT107I	GGYRCC	2 cut(s)	1580, 1632
BspTNI	GGTCTC	1 cut(s)	24
BsrDI	GCAATG	4 cut(s)	83, 194, 317, 1787
BsrFI	RCCGGY	3 cut(s)	79, 724, 1230
BsrI	ACTGG	5 cut(s)	227, 587, 597, 1441, 1566
BssAI	RCCGGY	3 cut(s)	79, 724, 1230
BssECI	CCNNGG	6 cut(s)	14, 820, 900, 1068, 1803, 2079
BssMI	GATC	5 cut(s)	696, 1099, 1525, 1834, 1978
BssNAI	GTATAC	1 cut(s)	2017
BssNI	GRCGYC	2 cut(s)	963, 1726
BssT1I	CCWWGG	2 cut(s)	900, 1068
Bst1107I	GTATAC	1 cut(s)	2017
Bst2UI	CCWGG	5 cut(s)	543, 960, 1188, 1805, 2001
Bst4CI	ACNGT	7 cut(s)	69, 105, 714, 1316, 1402, 2009, 2083
BstACI	GRCGYC	2 cut(s)	963, 1726
BstC8I	GCNNGC	4 cut(s)	726, 769, 1021, 1232
BstDEI	CTNAG	4 cut(s)	1026, 1257, 1329, 1369
BstDSI	CCRYGG	3 cut(s)	14, 1068, 2079
BstEII	GGTNACC	1 cut(s)	505
BstF5I	GGATG	1 cut(s)	788
BstH2I	RGCGCY	1 cut(s)	555
BstHHI	GCGC	2 cut(s)	554, 1011
BstKTI	GATC	5 cut(s)	699, 1102, 1528, 1837, 1981
BstMAI	GTCTC	2 cut(s)	24, 1841
BstMBI	GATC	5 cut(s)	696, 1099, 1525, 1834, 1978
BstMWI	GCNNNNNNNGC	5 cut(s)	640, 1240, 1288, 1823, 2166
BstNI	CCWGG	5 cut(s)	543, 960, 1188, 1805, 2001
BstPI	GGTNACC	1 cut(s)	505
BstSCI	CCNGG	8 cut(s)	541, 958, 1186, 1275, 1803, 1999, 2048, 2174
BstSLI	GKGCMC	1 cut(s)	1314
BstV1I	GCAGC	7 cut(s)	19, 423, 773, 776, 1879, 1882, 2178
BstV2I	GAAGAC	1 cut(s)	137
BstX2I	RGATCY	2 cut(s)	1834, 1978
BstXI	CCANNNNNNTGG	1 cut(s)	1385
BstYI	RGATCY	2 cut(s)	1834, 1978
BstZ17I	GTATAC	1 cut(s)	2017
BsuI	GTATCC	1 cut(s)	130
BsuRI	GGCC	7 cut(s)	593, 623, 728, 771, 1136, 1565, 1786
BtgI	CCRYGG	3 cut(s)	14, 1068, 2079
BtgZI	GCGATG	1 cut(s)	81
BtsCI	GGATG	1 cut(s)	788
BtsI	GCAGTG	2 cut(s)	1212, 2121
BtsIMutI	CAGTG	6 cut(s)	594, 1212, 1312, 1781, 2014, 2121
Cac8I	GCNNGC	4 cut(s)	726, 769, 1021, 1232
CfoI	GCGC	2 cut(s)	554, 1011
Cfr10I	RCCGGY	3 cut(s)	79, 724, 1230
Cfr13I	GGNCC	2 cut(s)	208, 905
CseI	GACGC	1 cut(s)	952
Csp6I	GTAC	7 cut(s)	164, 830, 1181, 1581, 1633, 1703, 1740
CviAII	CATG	7 cut(s)	968, 1069, 1253, 1385, 1466, 1917, 1949
CviQI	GTAC	7 cut(s)	164, 830, 1181, 1581, 1633, 1703, 1740
DdeI	CTNAG	4 cut(s)	1026, 1257, 1329, 1369
DpnI	GATC	5 cut(s)	698, 1101, 1527, 1836, 1980
DpnII	GATC	5 cut(s)	696, 1099, 1525, 1834, 1978
EaeI	YGGCCR	4 cut(s)	591, 621, 726, 1563
EciI	GGCGGA	3 cut(s)	276, 420, 1719
Eco130I	CCWWGG	2 cut(s)	900, 1068
Eco147I	AGGCCT	1 cut(s)	771
Eco31I	GGTCTC	1 cut(s)	24
Eco32I	GATATC	1 cut(s)	1501
Eco47I	GGWCC	2 cut(s)	208, 905
Eco47III	AGCGCT	1 cut(s)	553
Eco57I	CTGAAG	1 cut(s)	1967
Eco88I	CYCGRG	1 cut(s)	1611
Eco91I	GGTNACC	1 cut(s)	505
EcoO65I	GGTNACC	1 cut(s)	505
EcoRI	GAATTC	2 cut(s)	1373, 2074
EcoRII	CCWGG	5 cut(s)	541, 958, 1186, 1803, 1999
EcoRV	GATATC	1 cut(s)	1501
EcoT14I	CCWWGG	2 cut(s)	900, 1068
EcoT22I	ATGCAT	1 cut(s)	1654
ErhI	CCWWGG	2 cut(s)	900, 1068
FaeI	CATG	7 cut(s)	971, 1072, 1256, 1388, 1469, 1920, 1952
FaqI	GGGAC	1 cut(s)	918
FatI	CATG	7 cut(s)	967, 1068, 1252, 1384, 1465, 1916, 1948
FauI	CCCGC	1 cut(s)	132
FbaI	TGATCA	1 cut(s)	1099
FblI	GTMKAC	1 cut(s)	2016
Fnu4HI	GCNGC	9 cut(s)	33, 434, 437, 762, 765, 1017, 1893, 1896, 2167
FokI	GGATG	1 cut(s)	795
Fsp4HI	GCNGC	9 cut(s)	33, 434, 437, 762, 765, 1017, 1893, 1896, 2167
FspBI	CTAG	6 cut(s)	141, 645, 1295, 1454, 1709, 1875
GlaI	GCGC	2 cut(s)	553, 1010
GluI	GCNGC	9 cut(s)	33, 434, 437, 762, 765, 1017, 1893, 1896, 2167
GsuI	CTGGAG	2 cut(s)	525, 1626
HaeII	RGCGCY	1 cut(s)	555
HaeIII	GGCC	7 cut(s)	593, 623, 728, 771, 1136, 1565, 1786
HgaI	GACGC	1 cut(s)	952
HhaI	GCGC	2 cut(s)	554, 1011
Hin1I	GRCGYC	2 cut(s)	963, 1726
Hin1II	CATG	7 cut(s)	971, 1072, 1256, 1388, 1469, 1920, 1952
Hin6I	GCGC	2 cut(s)	552, 1009
HinP1I	GCGC	2 cut(s)	552, 1009
HincII	GTYRAC	2 cut(s)	489, 1264
HindII	GTYRAC	2 cut(s)	489, 1264
HinfI	GANTC	2 cut(s)	467, 1748
Hpy166II	GTNNAC	5 cut(s)	166, 489, 1171, 1264, 2017
Hpy188I	TCNGA	8 cut(s)	744, 824, 1027, 1132, 1530, 1552, 1681, 2189
Hpy188III	TCNNGA	6 cut(s)	327, 875, 1496, 1643, 1985, 2099
Hpy8I	GTNNAC	5 cut(s)	166, 489, 1171, 1264, 2017
HpyAV	CCTTC	9 cut(s)	36, 282, 306, 342, 648, 1151, 1189, 1952, 1982
HpyCH4III	ACNGT	7 cut(s)	69, 105, 714, 1316, 1402, 2009, 2083
HpyCH4IV	ACGT	1 cut(s)	1726
HpyCH4V	TGCA	9 cut(s)	736, 1040, 1205, 1282, 1445, 1476, 1652, 2036, 2126
HpyF10VI	GCNNNNNNNGC	5 cut(s)	640, 1240, 1288, 1823, 2166
HpyF3I	CTNAG	4 cut(s)	1026, 1257, 1329, 1369
HpySE526I	ACGT	1 cut(s)	1726
Hsp92I	GRCGYC	2 cut(s)	963, 1726
Hsp92II	CATG	7 cut(s)	971, 1072, 1256, 1388, 1469, 1920, 1952
HspAI	GCGC	2 cut(s)	552, 1009
Kpn2I	TCCGGA	1 cut(s)	874
KpnI	GGTACC	2 cut(s)	1584, 1636
KroI	GCCGGC	2 cut(s)	724, 1230
KroNI	GCCGGC	2 cut(s)	726, 1232
Ksp22I	TGATCA	1 cut(s)	1099
Kzo9I	GATC	5 cut(s)	696, 1099, 1525, 1834, 1978
LmnI	GCTCC	3 cut(s)	559, 1240, 1645
Lsp1109I	GCAGC	7 cut(s)	19, 423, 773, 776, 1879, 1882, 2178
LweI	GCATC	6 cut(s)	916, 1291, 1300, 1517, 1661, 1813
MaeI	CTAG	6 cut(s)	141, 645, 1295, 1454, 1709, 1875
MaeII	ACGT	1 cut(s)	1726
MalI	GATC	5 cut(s)	698, 1101, 1527, 1836, 1980
MboI	GATC	5 cut(s)	696, 1099, 1525, 1834, 1978
MboII	GAAGA	8 cut(s)	137, 890, 1481, 1820, 1873, 1973, 2075, 2083
MfeI	CAATTG	2 cut(s)	1103, 2020
MflI	RGATCY	2 cut(s)	1834, 1978
MhlI	GDGCHC	1 cut(s)	1314
MlsI	TGGCCA	3 cut(s)	593, 623, 1565
MluCI	AATT	8 cut(s)	825, 1103, 1373, 1485, 1532, 1852, 2020, 2074
MluNI	TGGCCA	3 cut(s)	593, 623, 1565
MlyI	GAGTC	1 cut(s)	461
MmeI	TCCRAC	3 cut(s)	235, 482, 775
Mox20I	TGGCCA	3 cut(s)	593, 623, 1565
Mph1103I	ATGCAT	1 cut(s)	1654
MroI	TCCGGA	1 cut(s)	874
MroNI	GCCGGC	2 cut(s)	724, 1230
MscI	TGGCCA	3 cut(s)	593, 623, 1565
MseI	TTAA	2 cut(s)	1217, 2148
MslI	CAYNNNNRTG	3 cut(s)	13, 945, 1383
Msp20I	TGGCCA	3 cut(s)	593, 623, 1565
MspA1I	CMGCKG	2 cut(s)	436, 1019
MspR9I	CCNGG	8 cut(s)	543, 960, 1188, 1277, 1805, 2001, 2050, 2176
MunI	CAATTG	2 cut(s)	1103, 2020
Mva1269I	GAATGC	1 cut(s)	2038
MvaI	CCWGG	5 cut(s)	543, 960, 1188, 1805, 2001
MwoI	GCNNNNNNNGC	5 cut(s)	640, 1240, 1288, 1823, 2166
NaeI	GCCGGC	2 cut(s)	726, 1232
NciI	CCSGG	3 cut(s)	1277, 2050, 2176
NcoI	CCATGG	1 cut(s)	1068
NdeII	GATC	5 cut(s)	696, 1099, 1525, 1834, 1978
NgoMIV	GCCGGC	2 cut(s)	724, 1230
NlaIII	CATG	7 cut(s)	971, 1072, 1256, 1388, 1469, 1920, 1952
NlaIV	GGNNCC	4 cut(s)	906, 1582, 1634, 1836
NmuCI	GTSAC	8 cut(s)	43, 69, 105, 229, 253, 505, 1666, 1882
NsiI	ATGCAT	1 cut(s)	1654
OliI	CACNNNNGTG	1 cut(s)	13
PaeR7I	CTCGAG	1 cut(s)	1611
PceI	AGGCCT	1 cut(s)	771
PctI	GAATGC	1 cut(s)	2038
PdiI	GCCGGC	2 cut(s)	726, 1232
PfeI	GAWTC	1 cut(s)	1748
PflMI	CCANNNNNTGG	1 cut(s)	914
PkrI	GCNGC	9 cut(s)	34, 435, 438, 763, 766, 1018, 1894, 1897, 2168
PleI	GAGTC	1 cut(s)	461
PpsI	GAGTC	1 cut(s)	461
PsiI	TTATAA	1 cut(s)	1718
Psp6I	CCWGG	5 cut(s)	541, 958, 1186, 1803, 1999
PspEI	GGTNACC	1 cut(s)	505
PspGI	CCWGG	5 cut(s)	541, 958, 1186, 1803, 1999
PspN4I	GGNNCC	4 cut(s)	906, 1582, 1634, 1836
PspPI	GGNCC	2 cut(s)	208, 905
PspXI	VCTCGAGB	1 cut(s)	1611
PsuI	RGATCY	2 cut(s)	1834, 1978
RsaI	GTAC	7 cut(s)	165, 831, 1182, 1582, 1634, 1704, 1741
RsaNI	GTAC	7 cut(s)	164, 830, 1181, 1581, 1633, 1703, 1740
RseI	CAYNNNNRTG	3 cut(s)	13, 945, 1383
SaqAI	TTAA	2 cut(s)	1217, 2148
SatI	GCNGC	9 cut(s)	33, 434, 437, 762, 765, 1017, 1893, 1896, 2167
Sau3AI	GATC	5 cut(s)	696, 1099, 1525, 1834, 1978
Sau96I	GGNCC	2 cut(s)	208, 905
ScaI	AGTACT	1 cut(s)	1182
SchI	GAGTC	1 cut(s)	461
ScrFI	CCNGG	8 cut(s)	543, 960, 1188, 1277, 1805, 2001, 2050, 2176
SduI	GDGCHC	1 cut(s)	1314
SfaNI	GCATC	6 cut(s)	916, 1291, 1300, 1517, 1661, 1813
Sfr274I	CTCGAG	1 cut(s)	1611
SinI	GGWCC	2 cut(s)	208, 905
SlaI	CTCGAG	1 cut(s)	1611
SmiMI	CAYNNNNRTG	3 cut(s)	13, 945, 1383
SmlI	CTYRAG	5 cut(s)	1611, 1753, 1797, 2155, 2161
SmoI	CTYRAG	5 cut(s)	1611, 1753, 1797, 2155, 2161
SpeI	ACTAGT	1 cut(s)	140
Sse9I	AATT	8 cut(s)	825, 1103, 1373, 1485, 1532, 1852, 2020, 2074
SseBI	AGGCCT	1 cut(s)	771
SspI	AATATT	1 cut(s)	1516
SspMI	CTAG	6 cut(s)	141, 645, 1295, 1454, 1709, 1875
StuI	AGGCCT	1 cut(s)	771
StyD4I	CCNGG	8 cut(s)	541, 958, 1186, 1275, 1803, 1999, 2048, 2174
StyI	CCWWGG	2 cut(s)	900, 1068
TaaI	ACNGT	7 cut(s)	69, 105, 714, 1316, 1402, 2009, 2083
TaiI	ACGT	1 cut(s)	1729
TaqI	TCGA	4 cut(s)	995, 1612, 1906, 1924
TasI	AATT	8 cut(s)	825, 1103, 1373, 1485, 1532, 1852, 2020, 2074
TatI	WGTACW	4 cut(s)	829, 1180, 1702, 1739
TauI	GCSGC	2 cut(s)	436, 1019
TfiI	GAWTC	1 cut(s)	1748
Tru1I	TTAA	2 cut(s)	1217, 2148
Tru9I	TTAA	2 cut(s)	1217, 2148
TscAI	CASTG	6 cut(s)	594, 1212, 1319, 1781, 2014, 2128
TseFI	GTSAC	8 cut(s)	43, 69, 105, 229, 253, 505, 1666, 1882
TseI	GCWGC	7 cut(s)	32, 436, 761, 764, 1892, 1895, 2166
Tsp45I	GTSAC	8 cut(s)	43, 69, 105, 229, 253, 505, 1666, 1882
TspDTI	ATGAA	5 cut(s)	1241, 1290, 1481, 1482, 1680
TspGWI	ACGGA	1 cut(s)	1685
TspRI	CASTG	6 cut(s)	594, 1212, 1319, 1781, 2014, 2128
Van91I	CCANNNNNTGG	1 cut(s)	914
VpaK11BI	GGWCC	2 cut(s)	208, 905
XapI	RAATTY	3 cut(s)	1373, 1532, 2074
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1615
XhoI	CTCGAG	1 cut(s)	1611
XmiI	GTMKAC	1 cut(s)	2016
XspI	CTAG	6 cut(s)	141, 645, 1295, 1454, 1709, 1875
ZraI	GACGTC	1 cut(s)	1727
ZrmI	AGTACT	1 cut(s)	1182
Zsp2I	ATGCAT	1 cut(s)	1654

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.