Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr15

Orthogroup ID

OG0009077

Physical Location & Seq

Genomic Coordinates Forward (+)

8008796 .. 8015906

Gene Structure 7111 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD15G1113600.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1863 bp

ATGTCGTCGTGGTCGGCAACAGCCTCGCCGCTGCCCTTGCTGTTCCGGAGGCGCTCGAGTGGCGAGATTAGGAATTTGGCCTCGGTTTCAAGCAGCATCTTACCGGCTTTTGGAACCGTCGTCGATGAAGCCCACTTGCAGCTCAAGAAGTTTGTTATTGCTCCCTATGATAGAAGATACAGGTGGTGGCAGGCGTTCTTGGTGGTGCTGGTGATATTCTCAGCATGGGCGTCGCCGTTCGAACTGGCCTTCAAAAAGGTGGCGACTGGGTCACTCCTGCCCGTCGATTTGGTTGTGGATGCATTCTTCGCCGTTGATATCATCCTAACTTTCTTCGTAGCTTACTTGGACAAGTCAACCTACCTCTTAGTACTTGATCACAAGAAAATCGCTTTGAGGTATGTTACAAGAATATATTTTCCACTAGACGTAGCGTCAACTCTACCATTTCAAGTGATATATAGAATTTTTACTGGCAATATGCACCATCGGCAAGTCTTTGGCTTCATCAATATGCTTCGTCTATGGCGTCTCAGGCGTGTTAGTGAACTCTTCAAAAGGCTAGAGAAAGACACACGCTTTAGCTACTTTTGGGTTCGATACATCAAACTAATTTGTGTTACACTGTTTGCAGTGCACTCATCAGGTTGCTTCTACTTCTGGATGGCAACCCATCACAAACAAGCAAAGGACACATGGATTGGAAGCCAGATCAACGACTTCGACCACAGAAGCATCTGGTTGTGTTACACGTATTCCATCTACTGGGCCACTGTCACTCTCACCACCGTTGGATATGGCGACTTGCATGCGGTCAACTTTGGGGAGAAGATTTTTAGCATCTTCTATATGCTTTTCAACATTGGCCTCTTTGCTTACTTGGTTGGAAACATGACCAATCTCGTCGTCCATAGCGCTGTTCGAACTTTATTCATGAGGGATGCCATCAATGAGATATTCAGATATGCAAGCAAAAACAGACTTCCAGAAGGCTTGAAAGAGCAAATGCTGGCTCACATGCAGCTCAAGTTCAAGACTGCAGAGTTGCAGCAAGAAGAAGTGCTTGAAGACCTTCCTAAGGCAATCAGATCCAGCATTTCCCACCATCTTTTCCGAAAAACCGTCGAGAAAACCTACCTGTTCAAGGGAGTCTCTGAACACCTAACCGTCCAATTGATTTCAGAGATGAAAGCAGAATACTTTCCCCCCAAAGTTGACATCATCTTACAAAACGAAATCCCAACAGATTTCTACATTCTAGTAAATGAAGCGTTGGACGTGCTCAAGTACAAGAACGGCACAGAACAGTTTTTGTCAAAACTAGGATCTGCAGACTTGGTAGGAGAGATTGGGGTATTTTTCAACATCCCCCAACCTTTTACGGTGAGAACAAAAAAGCTTTCTCAGGTTATTCGGATCAGCCATCAATCATTCAAGCAAATCGTTCAGTCACAGAATGAAGACAGCAAGATAATAATCAAAAACTTCATTGAGTACTTGAAAGACCTGAAACAAGAGGTGCGAGAAGAAATACCATTTCTAACAGAATTGCTCGATGACCTGAATATAGAGCATATACAACCAAATGAACCAGTGAATTACCAAGGAGAAGCGAACATGGAAGAAACAAGCGAAAATTTCACTCCAGGGCCAATTCCTATGAGAGTCATAATTCACGGACATCATCCAGATGAAGGTGACACGAACGGAAAACTCATTCATTTGCCCAAGTCAATGGAAGAGCTTCTGAAATTAGCAGAGAAAAAGTTTGGAAAAAGAGGAAGCACAGTTGTGATGGCAGACGGCTCACAGGTCGAAGAGCTAAACGCATTACGAGATAACGATCGCTTGTTTATCTTTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005215 GO:0005216 GO:0005244 GO:0005249 GO:0005261 GO:0005267 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0005886 GO:0005887 GO:0006810 GO:0006811 GO:0006812 GO:0006813 GO:0008150 GO:0008324 GO:0009605 GO:0009607 GO:0009624 GO:0009987 GO:0012505 GO:0015075 GO:0015077 GO:0015079 GO:0015267 GO:0015318 GO:0015672 GO:0016020 GO:0016021 GO:0022803 GO:0022832 GO:0022836 GO:0022838 GO:0022839 GO:0022843 GO:0022857 GO:0022890 GO:0030001 GO:0031224 GO:0031226 GO:0034220 GO:0042391 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044425 GO:0044444 GO:0044459 GO:0044464 GO:0046873 GO:0050896 GO:0051179 GO:0051234 GO:0051704 GO:0051707 GO:0055085 GO:0065007 GO:0065008 GO:0071804 GO:0071805 GO:0071944 GO:0098655 GO:0098660 GO:0098662

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Ion_trans KHA cNMP_binding

Protein Analysis

621

Amino Acids

71.91

Weight (kDa)

8.58

Isoelectric Point (pI)

41.0

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Ion_trans	PF00520	60 - 304	4.6e-37	Ion transport protein
Ion_trans_2	PF07885	249 - 302	1.3e-12	Ion channel
cNMP_binding	PF00027	400 - 484	2.8e-11	Cyclic nucleotide-binding domain
KHA	PF11834	555 - 619	2.3e-23	KHA, dimerisation domain of potassium ion channel

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009077)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G32650 AT4G32650 AT4G32650
fragaria_vesca	FvH4_2g30280 FvH4_2g30280
malus_domestica	MD08G1134700.v1.1 MD15G1113600.v1.1
prunus_persica	Prupe.1G464600_v2.0.a1 Prupe.1G464600_v2.0.a1
pyrus_communis	pycom08g11370
rosa_chinensis	RchiOBHm_Chr6g0312591
rosa_laevigata	RLG00000010313
rosa_multiflora	Rmu_co8350831.1_g000001 Rmu_sc0003094.1_g000003 Rmu_sc0008363.1_g000002
rosa_roxburghii	Rroxscaffold_7G00156670
rosa_rugosa	Rorug06G0396700
rosa_samantha	Rh6AG514600 Rh6BG525400 Rh6CG530600 Rh6DG516700
rosa_wichuraiana	Rw6G044710

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB7I	CCANNNNNTGG	1 cut(s)	765
AccIII	TCCGGA	1 cut(s)	45
AciI	CCGC	2 cut(s)	29, 812
AclWI	GGATC	3 cut(s)	1083, 1333, 1424
AcsI	RAATTY	3 cut(s)	73, 465, 1636
AcyI	GRCGYC	2 cut(s)	230, 529
AfaI	GTAC	3 cut(s)	372, 1289, 1496
AfeI	AGCGCT	1 cut(s)	916
AfiI	CCNNNNNNNGG	5 cut(s)	110, 765, 1078, 1144, 1694
AflIII	ACRYGT	1 cut(s)	750
AhdI	GACNNNNNGTC	1 cut(s)	433
AjiI	CACGTC	1 cut(s)	1279
AjnI	CCWGG	1 cut(s)	1645
AleI	CACNNNNGTG	1 cut(s)	1790
AluBI	AGCT	7 cut(s)	142, 341, 585, 1024, 1399, 1744, 1822
AluI	AGCT	7 cut(s)	142, 341, 585, 1024, 1399, 1744, 1822
Alw21I	GWGCWC	2 cut(s)	639, 1284
Alw26I	GTCTC	2 cut(s)	536, 1156
Alw44I	GTGCAC	1 cut(s)	635
AlwI	GGATC	3 cut(s)	1083, 1333, 1424
Ama87I	CYCGRG	1 cut(s)	55
Aor13HI	TCCGGA	1 cut(s)	45
Aor51HI	AGCGCT	1 cut(s)	916
AoxI	GGCC	5 cut(s)	78, 246, 768, 865, 1649
ApaLI	GTGCAC	1 cut(s)	635
ApeKI	GCWGC	5 cut(s)	31, 93, 139, 1021, 1048
ApoI	RAATTY	3 cut(s)	73, 465, 1636
Asp700I	GAANNNNTTC	3 cut(s)	1071, 1200, 1743
AspLEI	GCGC	2 cut(s)	54, 917
AspS9I	GGNCC	2 cut(s)	768, 1649
AsuHPI	GGTGA	4 cut(s)	223, 775, 1396, 1709
AsuII	TTCGAA	2 cut(s)	240, 922
AvaI	CYCGRG	1 cut(s)	55
AxyI	CCTNAGG	1 cut(s)	1077
BaeGI	GKGCMC	1 cut(s)	639
BbsI	GAAGAC	2 cut(s)	1074, 1467
Bbv12I	GWGCWC	2 cut(s)	639, 1284
BbvI	GCAGC	5 cut(s)	18, 105, 151, 1033, 1060
BccI	CCATC	8 cut(s)	495, 658, 681, 767, 953, 1113, 1431, 1789
BceAI	ACGGC	4 cut(s)	220, 296, 1312, 1819
BcgI	CGANNNNNNTGC	6 cut(s)	6, 40, 213, 247, 791, 825
BciT130I	CCWGG	1 cut(s)	1647
BclI	TGATCA	1 cut(s)	376
BcoDI	GTCTC	2 cut(s)	536, 1156
BfaI	CTAG	4 cut(s)	425, 563, 1259, 1322
BfmI	CTRYAG	2 cut(s)	1038, 1329
BfoI	RGCGCY	2 cut(s)	55, 918
BisI	GCNGC	6 cut(s)	29, 32, 94, 140, 1022, 1049
BlsI	GCNGC	6 cut(s)	30, 33, 95, 141, 1023, 1050
BmcAI	AGTACT	2 cut(s)	372, 1496
Bme1390I	CCNGG	1 cut(s)	1647
BmeRI	GACNNNNNGTC	1 cut(s)	433
BmeT110I	CYCGRG	1 cut(s)	55
BmgBI	CACGTC	1 cut(s)	1279
BmgT120I	GGNCC	2 cut(s)	768, 1649
BmiI	GGNNCC	1 cut(s)	115
BmrFI	CCNGG	1 cut(s)	1647
BmrI	ACTGGG	2 cut(s)	276, 775
BmsI	GCATC	5 cut(s)	105, 289, 744, 849, 931
BmuI	ACTGGG	2 cut(s)	276, 775
BpiI	GAAGAC	2 cut(s)	1074, 1467
BpmI	CTGGAG	1 cut(s)	1629
Bpu14I	TTCGAA	2 cut(s)	240, 922
BpuEI	CTTGAG	3 cut(s)	128, 1010, 1268
BsaAI	YACGTR	1 cut(s)	753
BsaBI	GATNNNNATC	2 cut(s)	1475, 1842
BsaHI	GRCGYC	2 cut(s)	230, 529
BsaJI	CCNNGG	3 cut(s)	81, 1603, 1646
BsaWI	WCCGGW	1 cut(s)	45
Bsc4I	CCNNNNNNNGG	5 cut(s)	110, 765, 1078, 1144, 1694
Bse118I	RCCGGY	1 cut(s)	103
Bse1I	ACTGG	5 cut(s)	249, 271, 478, 770, 1592
Bse21I	CCTNAGG	1 cut(s)	1077
Bse8I	GATNNNNATC	2 cut(s)	1475, 1842
BseAI	TCCGGA	1 cut(s)	45
BseBI	CCWGG	1 cut(s)	1647
BseDI	CCNNGG	3 cut(s)	81, 1603, 1646
BseGI	GGATG	6 cut(s)	304, 321, 669, 946, 1365, 1684
BseJI	GATNNNNATC	2 cut(s)	1475, 1842
BseLI	CCNNNNNNNGG	5 cut(s)	110, 765, 1078, 1144, 1694
BseMII	CTCAG	3 cut(s)	234, 547, 1418
BseNI	ACTGG	5 cut(s)	249, 271, 478, 770, 1592
BseSI	GKGCMC	1 cut(s)	639
BseXI	GCAGC	5 cut(s)	18, 105, 151, 1033, 1060
Bsh1285I	CGRYCG	1 cut(s)	1846
BshFI	GGCC	5 cut(s)	80, 248, 770, 867, 1651
BsiEI	CGRYCG	1 cut(s)	1846
BsiHKAI	GWGCWC	2 cut(s)	639, 1284
BsiHKCI	CYCGRG	1 cut(s)	55
BsiSI	CCGG	2 cut(s)	46, 104
BslI	CCNNNNNNNGG	5 cut(s)	110, 765, 1078, 1144, 1694
BsmAI	GTCTC	2 cut(s)	536, 1156
BsmBI	CGTCTC	1 cut(s)	536
BsmI	GAATGC	1 cut(s)	302
BsnI	GGCC	5 cut(s)	80, 248, 770, 867, 1651
BsoBI	CYCGRG	1 cut(s)	55
Bsp119I	TTCGAA	2 cut(s)	240, 922
Bsp1286I	GDGCHC	2 cut(s)	639, 1284
Bsp13I	TCCGGA	1 cut(s)	45
Bsp143I	GATC	6 cut(s)	376, 711, 1088, 1325, 1416, 1843
BspACI	CCGC	2 cut(s)	29, 812
BspANI	GGCC	5 cut(s)	80, 248, 770, 867, 1651
BspCNI	CTCAG	3 cut(s)	233, 546, 1417
BspEI	TCCGGA	1 cut(s)	45
BspHI	TCATGA	1 cut(s)	933
BspLI	GGNNCC	1 cut(s)	115
BspMAI	CTGCAG	2 cut(s)	1042, 1333
BspPI	GGATC	3 cut(s)	1083, 1333, 1424
BspQI	GCTCTTC	2 cut(s)	1734, 1812
BspT104I	TTCGAA	2 cut(s)	240, 922
BsrFI	RCCGGY	1 cut(s)	103
BsrI	ACTGG	5 cut(s)	249, 271, 478, 770, 1592
BssAI	RCCGGY	1 cut(s)	103
BssECI	CCNNGG	3 cut(s)	81, 1603, 1646
BssMI	GATC	6 cut(s)	376, 711, 1088, 1325, 1416, 1843
BssNI	GRCGYC	2 cut(s)	230, 529
BssT1I	CCWWGG	1 cut(s)	1603
Bst2UI	CCWGG	1 cut(s)	1647
Bst4CI	ACNGT	9 cut(s)	118, 627, 775, 790, 1123, 1168, 1308, 1384, 1789
Bst6I	CTCTTC	3 cut(s)	557, 1734, 1812
BstACI	GRCGYC	2 cut(s)	230, 529
BstBAI	YACGTR	1 cut(s)	753
BstBI	TTCGAA	2 cut(s)	240, 922
BstC8I	GCNNGC	4 cut(s)	192, 810, 970, 1011
BstDEI	CTNAG	5 cut(s)	220, 367, 533, 1077, 1404
BstENI	CCTNNNNNAGG	2 cut(s)	1076, 1142
BstF5I	GGATG	6 cut(s)	304, 321, 669, 946, 1365, 1684
BstH2I	RGCGCY	2 cut(s)	55, 918
BstHHI	GCGC	2 cut(s)	54, 917
BstKTI	GATC	6 cut(s)	379, 714, 1091, 1328, 1419, 1846
BstMAI	GTCTC	2 cut(s)	536, 1156
BstMBI	GATC	6 cut(s)	376, 711, 1088, 1325, 1416, 1843
BstMCI	CGRYCG	1 cut(s)	1846
BstMWI	GCNNNNNNNGC	5 cut(s)	37, 60, 308, 490, 535
BstNI	CCWGG	1 cut(s)	1647
BstNSI	RCATGY	2 cut(s)	812, 1021
BstSCI	CCNGG	1 cut(s)	1645
BstSFI	CTRYAG	2 cut(s)	1038, 1329
BstSLI	GKGCMC	1 cut(s)	639
BstV1I	GCAGC	5 cut(s)	18, 105, 151, 1033, 1060
BstV2I	GAAGAC	2 cut(s)	1074, 1467
BstX2I	RGATCY	2 cut(s)	1088, 1325
BstXI	CCANNNNNNTGG	1 cut(s)	1735
BstYI	RGATCY	2 cut(s)	1088, 1325
Bsu36I	CCTNAGG	1 cut(s)	1077
BsuRI	GGCC	5 cut(s)	80, 248, 770, 867, 1651
BtrI	CACGTC	1 cut(s)	1279
BtsCI	GGATG	6 cut(s)	304, 321, 669, 946, 1365, 1684
BtsI	GCAGTG	1 cut(s)	639
BtsIMutI	CAGTG	4 cut(s)	623, 639, 771, 1599
Cac8I	GCNNGC	4 cut(s)	192, 810, 970, 1011
CciI	TCATGA	1 cut(s)	933
CfoI	GCGC	2 cut(s)	54, 917
Cfr10I	RCCGGY	1 cut(s)	103
Cfr13I	GGNCC	2 cut(s)	768, 1649
CseI	GACGC	3 cut(s)	219, 423, 518
Csp6I	GTAC	3 cut(s)	371, 1288, 1495
CviAII	CATG	7 cut(s)	225, 696, 809, 892, 934, 1018, 1618
CviQI	GTAC	3 cut(s)	371, 1288, 1495
DdeI	CTNAG	5 cut(s)	220, 367, 533, 1077, 1404
DpnI	GATC	6 cut(s)	378, 713, 1090, 1327, 1418, 1845
DpnII	GATC	6 cut(s)	376, 711, 1088, 1325, 1416, 1843
DriI	GACNNNNNGTC	1 cut(s)	433
Eam1104I	CTCTTC	3 cut(s)	557, 1734, 1812
Eam1105I	GACNNNNNGTC	1 cut(s)	433
EarI	CTCTTC	3 cut(s)	557, 1734, 1812
Eco130I	CCWWGG	1 cut(s)	1603
Eco32I	GATATC	1 cut(s)	319
Eco47III	AGCGCT	1 cut(s)	916
Eco81I	CCTNAGG	1 cut(s)	1077
Eco88I	CYCGRG	1 cut(s)	55
EcoNI	CCTNNNNNAGG	2 cut(s)	1076, 1142
EcoRII	CCWGG	1 cut(s)	1645
EcoRV	GATATC	1 cut(s)	319
EcoT14I	CCWWGG	1 cut(s)	1603
EcoT22I	ATGCAT	1 cut(s)	304
ErhI	CCWWGG	1 cut(s)	1603
Esp3I	CGTCTC	1 cut(s)	536
FaeI	CATG	7 cut(s)	228, 699, 812, 895, 937, 1021, 1621
FalI	AAGNNNNNCTT	2 cut(s)	1047, 1079
FatI	CATG	7 cut(s)	224, 695, 808, 891, 933, 1017, 1617
FbaI	TGATCA	1 cut(s)	376
Fnu4HI	GCNGC	6 cut(s)	29, 32, 94, 140, 1022, 1049
FokI	GGATG	6 cut(s)	308, 311, 676, 953, 1352, 1671
Fsp4HI	GCNGC	6 cut(s)	29, 32, 94, 140, 1022, 1049
FspBI	CTAG	4 cut(s)	425, 563, 1259, 1322
GlaI	GCGC	2 cut(s)	53, 916
GluI	GCNGC	6 cut(s)	29, 32, 94, 140, 1022, 1049
GsuI	CTGGAG	1 cut(s)	1629
HaeII	RGCGCY	2 cut(s)	55, 918
HaeIII	GGCC	5 cut(s)	80, 248, 770, 867, 1651
HapII	CCGG	2 cut(s)	46, 104
HgaI	GACGC	3 cut(s)	219, 423, 518
HhaI	GCGC	2 cut(s)	54, 917
Hin1I	GRCGYC	2 cut(s)	230, 529
Hin1II	CATG	7 cut(s)	228, 699, 812, 895, 937, 1021, 1621
Hin6I	GCGC	2 cut(s)	52, 915
HinP1I	GCGC	2 cut(s)	52, 915
HincII	GTYRAC	4 cut(s)	357, 438, 817, 1216
HindII	GTYRAC	4 cut(s)	357, 438, 817, 1216
HindIII	AAGCTT	1 cut(s)	1397
HinfI	GANTC	2 cut(s)	1149, 1665
HpaII	CCGG	2 cut(s)	46, 104
HphI	GGTGA	4 cut(s)	223, 775, 1396, 1709
Hpy166II	GTNNAC	6 cut(s)	357, 438, 548, 637, 817, 1216
Hpy188I	TCNGA	7 cut(s)	962, 1088, 1115, 1156, 1183, 1416, 1749
Hpy188III	TCNNGA	8 cut(s)	46, 145, 661, 934, 986, 1033, 1126, 1688
Hpy8I	GTNNAC	6 cut(s)	357, 438, 548, 637, 817, 1216
Hpy99I	CGWCG	7 cut(s)	10, 122, 125, 235, 287, 908, 1127
HpyAV	CCTTC	4 cut(s)	259, 983, 1082, 1688
HpyCH4III	ACNGT	9 cut(s)	118, 627, 775, 790, 1123, 1168, 1308, 1384, 1789
HpyCH4IV	ACGT	3 cut(s)	429, 752, 1278
HpyF10VI	GCNNNNNNNGC	5 cut(s)	37, 60, 308, 490, 535
HpyF3I	CTNAG	5 cut(s)	220, 367, 533, 1077, 1404
HpySE526I	ACGT	3 cut(s)	429, 752, 1278
Hsp92I	GRCGYC	2 cut(s)	230, 529
Hsp92II	CATG	7 cut(s)	228, 699, 812, 895, 937, 1021, 1621
HspAI	GCGC	2 cut(s)	52, 915
Kpn2I	TCCGGA	1 cut(s)	45
Ksp22I	TGATCA	1 cut(s)	376
Kzo9I	GATC	6 cut(s)	376, 711, 1088, 1325, 1416, 1843
LguI	GCTCTTC	2 cut(s)	1734, 1812
LmnI	GCTCC	1 cut(s)	166
Lsp1109I	GCAGC	5 cut(s)	18, 105, 151, 1033, 1060
LweI	GCATC	5 cut(s)	105, 289, 744, 849, 931
MaeI	CTAG	4 cut(s)	425, 563, 1259, 1322
MaeII	ACGT	3 cut(s)	429, 752, 1278
MaeIII	GTNAC	7 cut(s)	270, 403, 619, 746, 775, 1449, 1697
MalI	GATC	6 cut(s)	378, 713, 1090, 1327, 1418, 1845
MboI	GATC	6 cut(s)	376, 711, 1088, 1325, 1416, 1843
MfeI	CAATTG	1 cut(s)	1172
MflI	RGATCY	2 cut(s)	1088, 1325
MhlI	GDGCHC	2 cut(s)	639, 1284
MlyI	GAGTC	2 cut(s)	1158, 1674
MmeI	TCCRAC	3 cut(s)	772, 865, 1254
MnlI	CCTC	9 cut(s)	34, 42, 91, 374, 390, 878, 930, 1510, 1772
Mph1103I	ATGCAT	1 cut(s)	304
MroI	TCCGGA	1 cut(s)	45
MroXI	GAANNNNTTC	3 cut(s)	1071, 1200, 1743
MseI	TTAA	1 cut(s)	1861
MslI	CAYNNNNRTG	3 cut(s)	512, 1689, 1790
MspA1I	CMGCKG	1 cut(s)	31
MspI	CCGG	2 cut(s)	46, 104
MspR9I	CCNGG	1 cut(s)	1647
MunI	CAATTG	1 cut(s)	1172
Mva1269I	GAATGC	1 cut(s)	302
MvaI	CCWGG	1 cut(s)	1647
MwoI	GCNNNNNNNGC	5 cut(s)	37, 60, 308, 490, 535
NdeII	GATC	6 cut(s)	376, 711, 1088, 1325, 1416, 1843
NlaIII	CATG	7 cut(s)	228, 699, 812, 895, 937, 1021, 1621
NlaIV	GGNNCC	1 cut(s)	115
NmuCI	GTSAC	4 cut(s)	270, 775, 1449, 1697
NsiI	ATGCAT	1 cut(s)	304
NspI	RCATGY	2 cut(s)	812, 1021
NspV	TTCGAA	2 cut(s)	240, 922
OliI	CACNNNNGTG	1 cut(s)	1790
PaeI	GCATGC	1 cut(s)	812
PaeR7I	CTCGAG	1 cut(s)	55
PagI	TCATGA	1 cut(s)	933
PciSI	GCTCTTC	2 cut(s)	1734, 1812
PcsI	WCGNNNNNNNCGW	1 cut(s)	526
PctI	GAATGC	1 cut(s)	302
PdmI	GAANNNNTTC	3 cut(s)	1071, 1200, 1743
PflFI	GACNNNGTC	1 cut(s)	268
PflMI	CCANNNNNTGG	1 cut(s)	765
PkrI	GCNGC	6 cut(s)	30, 33, 95, 141, 1023, 1050
Ple19I	CGATCG	1 cut(s)	1846
PleI	GAGTC	2 cut(s)	1157, 1673
PpsI	GAGTC	2 cut(s)	1157, 1673
Ppu21I	YACGTR	1 cut(s)	753
Psp6I	CCWGG	1 cut(s)	1645
PspGI	CCWGG	1 cut(s)	1645
PspN4I	GGNNCC	1 cut(s)	115
PspPI	GGNCC	2 cut(s)	768, 1649
PspXI	VCTCGAGB	1 cut(s)	55
PstI	CTGCAG	2 cut(s)	1042, 1333
PsuI	RGATCY	2 cut(s)	1088, 1325
PsyI	GACNNNGTC	1 cut(s)	268
PvuI	CGATCG	1 cut(s)	1846
RsaI	GTAC	3 cut(s)	372, 1289, 1496
RsaNI	GTAC	3 cut(s)	371, 1288, 1495
RseI	CAYNNNNRTG	3 cut(s)	512, 1689, 1790
SapI	GCTCTTC	2 cut(s)	1734, 1812
SaqAI	TTAA	1 cut(s)	1861
SatI	GCNGC	6 cut(s)	29, 32, 94, 140, 1022, 1049
Sau3AI	GATC	6 cut(s)	376, 711, 1088, 1325, 1416, 1843
Sau96I	GGNCC	2 cut(s)	768, 1649
ScaI	AGTACT	2 cut(s)	372, 1496
SchI	GAGTC	2 cut(s)	1158, 1674
ScrFI	CCNGG	1 cut(s)	1647
SduI	GDGCHC	2 cut(s)	639, 1284
SfaNI	GCATC	5 cut(s)	105, 289, 744, 849, 931
SfcI	CTRYAG	2 cut(s)	1038, 1329
Sfr274I	CTCGAG	1 cut(s)	55
SfuI	TTCGAA	2 cut(s)	240, 922
SlaI	CTCGAG	1 cut(s)	55
SmiMI	CAYNNNNRTG	3 cut(s)	512, 1689, 1790
SmlI	CTYRAG	4 cut(s)	55, 143, 1025, 1283
SmoI	CTYRAG	4 cut(s)	55, 143, 1025, 1283
SphI	GCATGC	1 cut(s)	812
SsiI	CCGC	2 cut(s)	29, 812
SspMI	CTAG	4 cut(s)	425, 563, 1259, 1322
StyD4I	CCNGG	1 cut(s)	1645
StyI	CCWWGG	1 cut(s)	1603
TaaI	ACNGT	9 cut(s)	118, 627, 775, 790, 1123, 1168, 1308, 1384, 1789
TaiI	ACGT	3 cut(s)	432, 755, 1281
TatI	WGTACW	3 cut(s)	370, 1287, 1494
TauI	GCSGC	1 cut(s)	31
Tru1I	TTAA	1 cut(s)	1861
Tru9I	TTAA	1 cut(s)	1861
TscAI	CASTG	4 cut(s)	630, 639, 778, 1599
TseFI	GTSAC	4 cut(s)	270, 775, 1449, 1697
TseI	GCWGC	5 cut(s)	31, 93, 139, 1021, 1048
Tsp45I	GTSAC	4 cut(s)	270, 775, 1449, 1697
TspGWI	ACGGA	2 cut(s)	1692, 1722
TspRI	CASTG	4 cut(s)	630, 639, 778, 1599
Tth111I	GACNNNGTC	1 cut(s)	268
Van91I	CCANNNNNTGG	1 cut(s)	765
VneI	GTGCAC	1 cut(s)	635
XagI	CCTNNNNNAGG	2 cut(s)	1076, 1142
XapI	RAATTY	3 cut(s)	73, 465, 1636
XceI	RCATGY	2 cut(s)	812, 1021
XhoI	CTCGAG	1 cut(s)	55
XmnI	GAANNNNTTC	3 cut(s)	1071, 1200, 1743
XspI	CTAG	4 cut(s)	425, 563, 1259, 1322
ZrmI	AGTACT	2 cut(s)	372, 1496
Zsp2I	ATGCAT	1 cut(s)	304

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.