Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr6A

Orthogroup ID

OG0009077

Physical Location & Seq

Genomic Coordinates Forward (+)

68483294 .. 68487181

Gene Structure 3888 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh6AG514600.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1554 bp

ATGTCGTCGTCATTCATAACGGCGTCGCCCCTACCTTTTCTGCTCCGAAGGCGCTCGAGTGGCGAAATCAGGAATTTGGCCTCGGTTTCGAGCAGCATATTGCCCGCTTTTGGAACCGTCATCGATGACGGCCACTTGCAGACCAAGAATTTTGTTGTTGCTCCCTACGATAGGAGATATCGGTGGTGGCAGACGTTCTTGGTGGTGCTGGTGGTGTACTCAGCATGGGCGTCGCCGTTCGAGTTGGCCTTCAAAAAGGTGGCAACAGGGTCTCTCATGCCGGTTGATTTGGTAGTCGATGCCTTCTTCGCCGTTGATATAGTTCTCACTTTCTTTGTGGCTTACTTGGATAAGTCAACCTACCTCCTAGTACTTGATCACAAAACAATTGCATCCAGGTATGTTACGAGATATTACTTCGCAATGGACGTAGCCTCAACTGTACCGTTTCAATCCCTTCACAGGCTCTTCACTGGGCATACGCACAATGGCCTGGTCTTTGGCATCCTCAATCTGCTTCGTCTCTGGCGTCTCCGGCGCGTCAGTGAACTCTTTAAAAGGCTAGAGAAAGACACTCGCTTTAGTTACTTTTGGATCAGATATGTCAAACTCATATGTGTTACACTATTTGCTGTGCACTCGGCGGGCTGCTTCTACTACTGGATGGCCACCCATCACAAAACCTCAGATGATACATGGATTGGAACTGAGGTCCATGATTTTGAGCACAGAAGCATCTGGTTAGGTTACACATATGCCATATACTGGGCAACTGTCACCCTCACAACTGTTGGCTATGGTGACTTGCACGCAGTCAACTTTGGGGAGAAGGTTTTCAGCATATTCTATATGCTTTTCAACATTGGACTCTTTGCTTATTTGGTTGGAAACATGACCAATCTCGTTGTCCACAGTGCTGTCCGGACATTGTTCATGAGGGACTCCATCAATGAGATATTCAGATATGCAAGCAAGAACAGACTTCCAGAAGGCTTGAAAGAGCAAATGCTTGCCCACATGCAGCTCAAGTTCAAGACAGCAGAGTTACAGCAGGAAGAAGTTCTACAGGACCTTCCGAAAGCAATAAGATCCAGCATTGCCCACCATCTTTTCCGTAAAACCATTGATAAAACATACCTATTTAAAGGAATCTCTGAAGAGCTTACTGTCCAATTGGTCTCAGAGATGAAAGCAGAATATTTTCCACCCAAAGTCGATATTATCTTGCAAAACGAAATTCCAACAGACTTTTACATTCTAGTAGCTGGAGCTTTGGACGTGCTAATATACAAGAACGGCACAGAACAGTTCTTGTCAAATCTAGGATCTGCAGACATGGTAGGAGAGTTTGGCGTATTTTTCAATATCCCACAACCTTTTACAGTGAGAACAAAAAGGCTTTCTCAGGTTATCCGCATCAGTCATCAGTATTTCAAGCAAATGATCCAGCCACAGAATGAAGACGCAAAGATAATCATCACAAACTTTACTCAGGTCTGTAAGACTATAGACATCATGACCGTCCCTGATCGATCATTGTTATGCAACTTCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005215 GO:0005216 GO:0005244 GO:0005249 GO:0005261 GO:0005267 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0005886 GO:0005887 GO:0006810 GO:0006811 GO:0006812 GO:0006813 GO:0008150 GO:0008324 GO:0009605 GO:0009607 GO:0009624 GO:0009987 GO:0012505 GO:0015075 GO:0015077 GO:0015079 GO:0015267 GO:0015318 GO:0015672 GO:0016020 GO:0016021 GO:0022803 GO:0022832 GO:0022836 GO:0022838 GO:0022839 GO:0022843 GO:0022857 GO:0022890 GO:0030001 GO:0031224 GO:0031226 GO:0034220 GO:0042391 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044425 GO:0044444 GO:0044459 GO:0044464 GO:0046873 GO:0050896 GO:0051179 GO:0051234 GO:0051704 GO:0051707 GO:0055085 GO:0065007 GO:0065008 GO:0071804 GO:0071805 GO:0071944 GO:0098655 GO:0098660 GO:0098662

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Ion_trans KHA cNMP_binding

Protein Analysis

517

Amino Acids

59.77

Weight (kDa)

9.04

Isoelectric Point (pI)

40.72

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Ion_trans	PF00520	60 - 304	2.5e-38	Ion transport protein
Ion_trans_2	PF07885	234 - 302	4e-13	Ion channel
cNMP_binding	PF00027	400 - 483	1.5e-13	Cyclic nucleotide-binding domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009077)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G32650 AT4G32650 AT4G32650
fragaria_vesca	FvH4_2g30280 FvH4_2g30280
malus_domestica	MD08G1134700.v1.1 MD15G1113600.v1.1
prunus_persica	Prupe.1G464600_v2.0.a1 Prupe.1G464600_v2.0.a1
pyrus_communis	pycom08g11370
rosa_chinensis	RchiOBHm_Chr6g0312591
rosa_laevigata	RLG00000010313
rosa_multiflora	Rmu_co8350831.1_g000001 Rmu_sc0003094.1_g000003 Rmu_sc0008363.1_g000002
rosa_roxburghii	Rroxscaffold_7G00156670
rosa_rugosa	Rorug06G0396700
rosa_samantha	Rh6AG514600 Rh6BG525400 Rh6CG530600 Rh6DG516700
rosa_wichuraiana	Rw6G044710

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB7I	CCANNNNNTGG	1 cut(s)	765
AccII	CGCG	1 cut(s)	540
AccIII	TCCGGA	1 cut(s)	921
AciI	CCGC	3 cut(s)	105, 644, 1414
AclWI	GGATC	4 cut(s)	602, 1083, 1333, 1438
AcoI	YGGCCR	2 cut(s)	130, 666
AcsI	RAATTY	3 cut(s)	73, 148, 1236
AcuI	CTGAAG	1 cut(s)	1176
AcyI	GRCGYC	3 cut(s)	23, 230, 529
AfaI	GTAC	3 cut(s)	218, 372, 444
AfiI	CCNNNNNNNGG	4 cut(s)	110, 171, 462, 765
AgsI	TTSAA	7 cut(s)	253, 452, 859, 997, 1033, 1363, 1435
AjiI	CACGTC	1 cut(s)	1279
AjnI	CCWGG	2 cut(s)	395, 492
AluBI	AGCT	4 cut(s)	1024, 1162, 1265, 1271
AluI	AGCT	4 cut(s)	1024, 1162, 1265, 1271
Alw21I	GWGCWC	2 cut(s)	639, 729
Alw26I	GTCTC	4 cut(s)	276, 527, 536, 1183
Alw44I	GTGCAC	1 cut(s)	635
AlwI	GGATC	4 cut(s)	602, 1083, 1333, 1438
Ama87I	CYCGRG	1 cut(s)	55
Aor13HI	TCCGGA	1 cut(s)	921
AoxI	GGCC	5 cut(s)	78, 130, 246, 490, 666
ApaLI	GTGCAC	1 cut(s)	635
ApeKI	GCWGC	3 cut(s)	93, 648, 1021
ApoI	RAATTY	3 cut(s)	73, 148, 1236
Asp700I	GAANNNNTTC	3 cut(s)	833, 1059, 1200
AspLEI	GCGC	2 cut(s)	54, 540
AspS9I	GGNCC	2 cut(s)	712, 1069
AsuHPI	GGTGA	2 cut(s)	769, 812
AvaI	CYCGRG	1 cut(s)	55
AvaII	GGWCC	2 cut(s)	712, 1069
BaeGI	GKGCMC	1 cut(s)	639
BalI	TGGCCA	1 cut(s)	668
BarI	GAAGNNNNNNTAC	2 cut(s)	1047, 1079
BbsI	GAAGAC	1 cut(s)	1467
Bbv12I	GWGCWC	2 cut(s)	639, 729
BbvI	GCAGC	3 cut(s)	105, 635, 1033
BccI	CCATC	4 cut(s)	658, 681, 953, 1113
BceAI	ACGGC	5 cut(s)	36, 145, 220, 296, 1312
BcgI	CGANNNNNNTGC	2 cut(s)	213, 247
BciT130I	CCWGG	2 cut(s)	397, 494
BclI	TGATCA	1 cut(s)	376
BcoDI	GTCTC	4 cut(s)	276, 527, 536, 1183
BfaI	CTAG	4 cut(s)	368, 563, 1259, 1322
BfmI	CTRYAG	3 cut(s)	1064, 1329, 1506
BfoI	RGCGCY	1 cut(s)	55
BisI	GCNGC	3 cut(s)	94, 649, 1022
BlsI	GCNGC	3 cut(s)	95, 650, 1023
BmcAI	AGTACT	1 cut(s)	372
Bme1390I	CCNGG	2 cut(s)	397, 494
Bme18I	GGWCC	2 cut(s)	712, 1069
BmeT110I	CYCGRG	1 cut(s)	55
BmgBI	CACGTC	1 cut(s)	1279
BmgT120I	GGNCC	2 cut(s)	712, 1069
BmiI	GGNNCC	1 cut(s)	115
BmrFI	CCNGG	2 cut(s)	397, 494
BmrI	ACTGGG	2 cut(s)	483, 775
BmsI	GCATC	5 cut(s)	289, 401, 513, 744, 1425
BmuI	ACTGGG	2 cut(s)	483, 775
BpiI	GAAGAC	1 cut(s)	1467
BpmI	CTGGAG	1 cut(s)	1287
BpuEI	CTTGAG	1 cut(s)	1010
Bsa29I	ATCGAT	2 cut(s)	123, 1531
BsaBI	GATNNNNATC	1 cut(s)	1475
BsaHI	GRCGYC	3 cut(s)	23, 230, 529
BsaI	GGTCTC	2 cut(s)	276, 1183
BsaJI	CCNNGG	1 cut(s)	81
BsaWI	WCCGGW	1 cut(s)	921
Bsc4I	CCNNNNNNNGG	4 cut(s)	110, 171, 462, 765
Bse118I	RCCGGY	1 cut(s)	280
Bse1I	ACTGG	3 cut(s)	478, 665, 770
Bse3DI	GCAATG	2 cut(s)	429, 1095
Bse8I	GATNNNNATC	1 cut(s)	1475
BseAI	TCCGGA	1 cut(s)	921
BseBI	CCWGG	2 cut(s)	397, 494
BseCI	ATCGAT	2 cut(s)	123, 1531
BseDI	CCNNGG	1 cut(s)	81
BseGI	GGATG	3 cut(s)	392, 504, 669
BseJI	GATNNNNATC	1 cut(s)	1475
BseLI	CCNNNNNNNGG	4 cut(s)	110, 171, 462, 765
BseMI	GCAATG	2 cut(s)	429, 1095
BseMII	CTCAG	6 cut(s)	234, 699, 699, 1194, 1418, 1505
BseNI	ACTGG	3 cut(s)	478, 665, 770
BseSI	GKGCMC	1 cut(s)	639
BseXI	GCAGC	3 cut(s)	105, 635, 1033
Bsh1236I	CGCG	1 cut(s)	540
BshFI	GGCC	5 cut(s)	80, 132, 248, 492, 668
BshVI	ATCGAT	2 cut(s)	123, 1531
BsiHKAI	GWGCWC	2 cut(s)	639, 729
BsiHKCI	CYCGRG	1 cut(s)	55
BsiSI	CCGG	3 cut(s)	281, 535, 922
BslFI	GGGAC	2 cut(s)	953, 1508
BslI	CCNNNNNNNGG	4 cut(s)	110, 171, 462, 765
BsmAI	GTCTC	4 cut(s)	276, 527, 536, 1183
BsmBI	CGTCTC	2 cut(s)	527, 536
BsmFI	GGGAC	2 cut(s)	953, 1508
BsnI	GGCC	5 cut(s)	80, 132, 248, 492, 668
Bso31I	GGTCTC	2 cut(s)	276, 1183
BsoBI	CYCGRG	1 cut(s)	55
Bsp1286I	GDGCHC	2 cut(s)	639, 729
Bsp13I	TCCGGA	1 cut(s)	921
Bsp143I	GATC	7 cut(s)	376, 594, 1088, 1325, 1443, 1528, 1532
BspACI	CCGC	3 cut(s)	105, 644, 1414
BspANI	GGCC	5 cut(s)	80, 132, 248, 492, 668
BspCNI	CTCAG	6 cut(s)	233, 698, 700, 1193, 1417, 1504
BspDI	ATCGAT	2 cut(s)	123, 1531
BspEI	TCCGGA	1 cut(s)	921
BspFNI	CGCG	1 cut(s)	540
BspHI	TCATGA	2 cut(s)	933, 1515
BspLI	GGNNCC	1 cut(s)	115
BspMAI	CTGCAG	1 cut(s)	1333
BspPI	GGATC	4 cut(s)	602, 1083, 1333, 1438
BspQI	GCTCTTC	2 cut(s)	473, 1152
BspTNI	GGTCTC	2 cut(s)	276, 1183
BsrDI	GCAATG	2 cut(s)	429, 1095
BsrFI	RCCGGY	1 cut(s)	280
BsrI	ACTGG	3 cut(s)	478, 665, 770
BssAI	RCCGGY	1 cut(s)	280
BssECI	CCNNGG	1 cut(s)	81
BssMI	GATC	7 cut(s)	376, 594, 1088, 1325, 1443, 1528, 1532
BssNI	GRCGYC	3 cut(s)	23, 230, 529
Bst2UI	CCWGG	2 cut(s)	397, 494
Bst6I	CTCTTC	2 cut(s)	473, 1152
BstACI	GRCGYC	3 cut(s)	23, 230, 529
BstC8I	GCNNGC	5 cut(s)	105, 646, 810, 970, 1011
BstDEI	CTNAG	6 cut(s)	220, 685, 708, 1180, 1404, 1491
BstENI	CCTNNNNNAGG	1 cut(s)	169
BstF5I	GGATG	3 cut(s)	392, 504, 669
BstFNI	CGCG	1 cut(s)	540
BstH2I	RGCGCY	1 cut(s)	55
BstHHI	GCGC	2 cut(s)	54, 540
BstKTI	GATC	7 cut(s)	379, 597, 1091, 1328, 1446, 1531, 1535
BstMAI	GTCTC	4 cut(s)	276, 527, 536, 1183
BstMBI	GATC	7 cut(s)	376, 594, 1088, 1325, 1443, 1528, 1532
BstMWI	GCNNNNNNNGC	4 cut(s)	49, 60, 308, 535
BstNI	CCWGG	2 cut(s)	397, 494
BstNSI	RCATGY	1 cut(s)	1021
BstSCI	CCNGG	2 cut(s)	395, 492
BstSFI	CTRYAG	3 cut(s)	1064, 1329, 1506
BstSLI	GKGCMC	1 cut(s)	639
BstUI	CGCG	1 cut(s)	540
BstV1I	GCAGC	3 cut(s)	105, 635, 1033
BstV2I	GAAGAC	1 cut(s)	1467
BstX2I	RGATCY	2 cut(s)	1088, 1325
BstYI	RGATCY	2 cut(s)	1088, 1325
Bsu15I	ATCGAT	2 cut(s)	123, 1531
BsuRI	GGCC	5 cut(s)	80, 132, 248, 492, 668
BsuTUI	ATCGAT	2 cut(s)	123, 1531
BtrI	CACGTC	1 cut(s)	1279
BtsCI	GGATG	3 cut(s)	392, 504, 669
BtsIMutI	CAGTG	4 cut(s)	471, 550, 919, 1389
Cac8I	GCNNGC	5 cut(s)	105, 646, 810, 970, 1011
CciI	TCATGA	2 cut(s)	933, 1515
CfoI	GCGC	2 cut(s)	54, 540
Cfr10I	RCCGGY	1 cut(s)	280
Cfr13I	GGNCC	2 cut(s)	712, 1069
ClaI	ATCGAT	2 cut(s)	123, 1531
CseI	GACGC	5 cut(s)	12, 219, 518, 529, 1472
Csp6I	GTAC	3 cut(s)	217, 371, 443
CviAII	CATG	9 cut(s)	225, 277, 696, 716, 892, 934, 1018, 1336, 1516
CviQI	GTAC	3 cut(s)	217, 371, 443
DdeI	CTNAG	6 cut(s)	220, 685, 708, 1180, 1404, 1491
DpnI	GATC	7 cut(s)	378, 596, 1090, 1327, 1445, 1530, 1534
DpnII	GATC	7 cut(s)	376, 594, 1088, 1325, 1443, 1528, 1532
DraI	TTTAAA	2 cut(s)	556, 1144
EaeI	YGGCCR	2 cut(s)	130, 666
Eam1104I	CTCTTC	2 cut(s)	473, 1152
EarI	CTCTTC	2 cut(s)	473, 1152
Eco31I	GGTCTC	2 cut(s)	276, 1183
Eco32I	GATATC	1 cut(s)	179
Eco47I	GGWCC	2 cut(s)	712, 1069
Eco57I	CTGAAG	1 cut(s)	1176
Eco88I	CYCGRG	1 cut(s)	55
EcoNI	CCTNNNNNAGG	1 cut(s)	169
EcoO109I	RGGNCCY	1 cut(s)	1069
EcoRII	CCWGG	2 cut(s)	395, 492
EcoRV	GATATC	1 cut(s)	179
Esp3I	CGTCTC	2 cut(s)	527, 536
FaeI	CATG	9 cut(s)	228, 280, 699, 719, 895, 937, 1021, 1339, 1519
FaqI	GGGAC	2 cut(s)	953, 1508
FatI	CATG	9 cut(s)	224, 276, 695, 715, 891, 933, 1017, 1335, 1515
FauI	CCCGC	2 cut(s)	112, 637
FauNDI	CATATG	2 cut(s)	614, 754
FbaI	TGATCA	1 cut(s)	376
Fnu4HI	GCNGC	3 cut(s)	94, 649, 1022
FokI	GGATG	3 cut(s)	379, 491, 676
Fsp4HI	GCNGC	3 cut(s)	94, 649, 1022
FspBI	CTAG	4 cut(s)	368, 563, 1259, 1322
GlaI	GCGC	2 cut(s)	53, 539
GluI	GCNGC	3 cut(s)	94, 649, 1022
GsuI	CTGGAG	1 cut(s)	1287
HaeII	RGCGCY	1 cut(s)	55
HaeIII	GGCC	5 cut(s)	80, 132, 248, 492, 668
HapII	CCGG	3 cut(s)	281, 535, 922
HgaI	GACGC	5 cut(s)	12, 219, 518, 529, 1472
HhaI	GCGC	2 cut(s)	54, 540
Hin1I	GRCGYC	3 cut(s)	23, 230, 529
Hin1II	CATG	9 cut(s)	228, 280, 699, 719, 895, 937, 1021, 1339, 1519
Hin6I	GCGC	2 cut(s)	52, 538
HinP1I	GCGC	2 cut(s)	52, 538
HincII	GTYRAC	2 cut(s)	357, 817
HindII	GTYRAC	2 cut(s)	357, 817
HinfI	GANTC	3 cut(s)	867, 941, 1149
HpaII	CCGG	3 cut(s)	281, 535, 922
HphI	GGTGA	2 cut(s)	769, 812
Hpy166II	GTNNAC	6 cut(s)	217, 357, 548, 637, 817, 910
Hpy188I	TCNGA	7 cut(s)	47, 599, 688, 962, 1077, 1156, 1183
Hpy188III	TCNNGA	6 cut(s)	70, 922, 934, 986, 1033, 1516
Hpy8I	GTNNAC	6 cut(s)	217, 357, 548, 637, 817, 910
Hpy99I	CGWCG	3 cut(s)	10, 28, 235
HpyAV	CCTTC	7 cut(s)	42, 259, 313, 467, 823, 983, 1082
HpyCH4IV	ACGT	3 cut(s)	194, 429, 1278
HpyCH4V	TGCA	9 cut(s)	139, 392, 637, 808, 968, 1021, 1228, 1331, 1545
HpyF10VI	GCNNNNNNNGC	4 cut(s)	49, 60, 308, 535
HpyF3I	CTNAG	6 cut(s)	220, 685, 708, 1180, 1404, 1491
HpySE526I	ACGT	3 cut(s)	194, 429, 1278
Hsp92I	GRCGYC	3 cut(s)	23, 230, 529
Hsp92II	CATG	9 cut(s)	228, 280, 699, 719, 895, 937, 1021, 1339, 1519
HspAI	GCGC	2 cut(s)	52, 538
Kpn2I	TCCGGA	1 cut(s)	921
Ksp22I	TGATCA	1 cut(s)	376
Kzo9I	GATC	7 cut(s)	376, 594, 1088, 1325, 1443, 1528, 1532
LguI	GCTCTTC	2 cut(s)	473, 1152
LmnI	GCTCC	3 cut(s)	48, 166, 1268
Lsp1109I	GCAGC	3 cut(s)	105, 635, 1033
LweI	GCATC	5 cut(s)	289, 401, 513, 744, 1425
MaeI	CTAG	4 cut(s)	368, 563, 1259, 1322
MaeII	ACGT	3 cut(s)	194, 429, 1278
MaeIII	GTNAC	7 cut(s)	403, 584, 619, 746, 775, 800, 1044
MalI	GATC	7 cut(s)	378, 596, 1090, 1327, 1445, 1530, 1534
MboI	GATC	7 cut(s)	376, 594, 1088, 1325, 1443, 1528, 1532
MboII	GAAGA	5 cut(s)	298, 460, 1067, 1169, 1472
MfeI	CAATTG	2 cut(s)	387, 1172
MflI	RGATCY	2 cut(s)	1088, 1325
MhlI	GDGCHC	2 cut(s)	639, 729
MlsI	TGGCCA	1 cut(s)	668
MluCI	AATT	5 cut(s)	73, 148, 387, 1172, 1236
MluNI	TGGCCA	1 cut(s)	668
MlyI	GAGTC	2 cut(s)	861, 935
MmeI	TCCRAC	2 cut(s)	865, 1265
MnlI	CCTC	8 cut(s)	91, 374, 445, 518, 694, 703, 791, 930
Mox20I	TGGCCA	1 cut(s)	668
MroI	TCCGGA	1 cut(s)	921
MroXI	GAANNNNTTC	3 cut(s)	833, 1059, 1200
MscI	TGGCCA	1 cut(s)	668
MseI	TTAA	2 cut(s)	555, 1143
MslI	CAYNNNNRTG	1 cut(s)	1540
Msp20I	TGGCCA	1 cut(s)	668
MspI	CCGG	3 cut(s)	281, 535, 922
MspR9I	CCNGG	2 cut(s)	397, 494
MunI	CAATTG	2 cut(s)	387, 1172
MvaI	CCWGG	2 cut(s)	397, 494
MvnI	CGCG	1 cut(s)	540
MwoI	GCNNNNNNNGC	4 cut(s)	49, 60, 308, 535
NdeI	CATATG	2 cut(s)	614, 754
NdeII	GATC	7 cut(s)	376, 594, 1088, 1325, 1443, 1528, 1532
NlaIII	CATG	9 cut(s)	228, 280, 699, 719, 895, 937, 1021, 1339, 1519
NlaIV	GGNNCC	1 cut(s)	115
NmeAIII	GCCGAG	1 cut(s)	620
NmuCI	GTSAC	2 cut(s)	775, 800
NspI	RCATGY	1 cut(s)	1021
PaeR7I	CTCGAG	1 cut(s)	55
PagI	TCATGA	2 cut(s)	933, 1515
PciSI	GCTCTTC	2 cut(s)	473, 1152
PcsI	WCGNNNNNNNCGW	2 cut(s)	426, 526
PdmI	GAANNNNTTC	3 cut(s)	833, 1059, 1200
PfeI	GAWTC	1 cut(s)	1149
PflMI	CCANNNNNTGG	1 cut(s)	765
PkrI	GCNGC	3 cut(s)	95, 650, 1023
PleI	GAGTC	2 cut(s)	861, 935
PpsI	GAGTC	2 cut(s)	861, 935
PpuMI	RGGWCCY	1 cut(s)	1069
Psp5II	RGGWCCY	1 cut(s)	1069
Psp6I	CCWGG	2 cut(s)	395, 492
PspGI	CCWGG	2 cut(s)	395, 492
PspN4I	GGNNCC	1 cut(s)	115
PspPI	GGNCC	2 cut(s)	712, 1069
PspPPI	RGGWCCY	1 cut(s)	1069
PspXI	VCTCGAGB	1 cut(s)	55
PstI	CTGCAG	1 cut(s)	1333
PsuI	RGATCY	2 cut(s)	1088, 1325
RsaI	GTAC	3 cut(s)	218, 372, 444
RsaNI	GTAC	3 cut(s)	217, 371, 443
RseI	CAYNNNNRTG	1 cut(s)	1540
SapI	GCTCTTC	2 cut(s)	473, 1152
SaqAI	TTAA	2 cut(s)	555, 1143
SatI	GCNGC	3 cut(s)	94, 649, 1022
Sau3AI	GATC	7 cut(s)	376, 594, 1088, 1325, 1443, 1528, 1532
Sau96I	GGNCC	2 cut(s)	712, 1069
ScaI	AGTACT	1 cut(s)	372
SchI	GAGTC	2 cut(s)	861, 935
ScrFI	CCNGG	2 cut(s)	397, 494
SduI	GDGCHC	2 cut(s)	639, 729
SfaNI	GCATC	5 cut(s)	289, 401, 513, 744, 1425
SfcI	CTRYAG	3 cut(s)	1064, 1329, 1506
Sfr274I	CTCGAG	1 cut(s)	55
SinI	GGWCC	2 cut(s)	712, 1069
SlaI	CTCGAG	1 cut(s)	55
SmiMI	CAYNNNNRTG	1 cut(s)	1540
SmlI	CTYRAG	2 cut(s)	55, 1025
SmoI	CTYRAG	2 cut(s)	55, 1025
Sse9I	AATT	5 cut(s)	73, 148, 387, 1172, 1236
SsiI	CCGC	3 cut(s)	105, 644, 1414
SspI	AATATT	1 cut(s)	1199
SspMI	CTAG	4 cut(s)	368, 563, 1259, 1322
StyD4I	CCNGG	2 cut(s)	395, 492
TaiI	ACGT	3 cut(s)	197, 432, 1281
TaqI	TCGA	7 cut(s)	56, 89, 123, 240, 297, 1215, 1531
TasI	AATT	5 cut(s)	73, 148, 387, 1172, 1236
TatI	WGTACW	2 cut(s)	216, 370
TfiI	GAWTC	1 cut(s)	1149
Tru1I	TTAA	2 cut(s)	555, 1143
Tru9I	TTAA	2 cut(s)	555, 1143
TscAI	CASTG	4 cut(s)	478, 550, 919, 1389
TseFI	GTSAC	2 cut(s)	775, 800
TseI	GCWGC	3 cut(s)	93, 648, 1021
Tsp45I	GTSAC	2 cut(s)	775, 800
TspDTI	ATGAA	4 cut(s)	4, 922, 1202, 1473
TspGWI	ACGGA	1 cut(s)	1103
TspRI	CASTG	4 cut(s)	478, 550, 919, 1389
Van91I	CCANNNNNTGG	1 cut(s)	765
VneI	GTGCAC	1 cut(s)	635
VpaK11BI	GGWCC	2 cut(s)	712, 1069
XagI	CCTNNNNNAGG	1 cut(s)	169
XapI	RAATTY	3 cut(s)	73, 148, 1236
XceI	RCATGY	1 cut(s)	1021
XhoI	CTCGAG	1 cut(s)	55
XmnI	GAANNNNTTC	3 cut(s)	833, 1059, 1200
XspI	CTAG	4 cut(s)	368, 563, 1259, 1322
ZrmI	AGTACT	1 cut(s)	372

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.