Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr15

Orthogroup ID

OG0009441

Physical Location & Seq

Genomic Coordinates Reverse (-)

10173104 .. 10175798

Gene Structure 2695 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD15G1138700.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2421 bp

ATGAATCCTGTGGAACTCTTGTCTGATCTCTATGCATTGAGACAGTTATATGGACTCCTCCAGAATGGCGAAGGCTGGCCGCAACATGTAAATTCAAACAATGTGGAAAAAGCTTTGGACACGAGAGCGCGACAATTGTTAAAAGATCTTCTAGATAATGCGGCTGAAAAGATTTTCAATACTCATTTGAAGATGATAACAACTCAGGCAGCTGTTAGTAGCAAACCTTGCCCCTCTCAACCAGAGCAACCCAAGGCTGTGCCTAAGAAGAATTCTCCTCTTTCCCCAACAGTTACAGTGAAATCTTCTCCTAACAGAGTCTTGAATGATGATGGAAAGGATTCTAAAAAGTACATGTTCGCTCCAGAGGAGGATGGGTCACTGAAGAAGCTGAAGCCTGAGAGAGAAATTGCGGAGTCTAAAGTAAGCATCTCATCGGACCTGCCTGAACAGAAAAAGAAAATGTGTCGAATCTGTTTAGAAAACAATCTGAAGAAACAGTACTCAGCCAAGGAAACAAAATTCTCCAATGACAGAGTCAAGGTACCTGACGAAAACAGTGTTAGTCAAGATAAGCAACATGATTGGCATAGTCATCTCAATGTTCTCGATGAGCATGCTAAAAGATTACAAGAATCTAATACAAAGTCCACAGTGAGAGGGAATGACATCAGTGAAACTCTTGGAAATCCAAGCATTGTTTCTGGTGCTTGTTCCCCAATATCTCCAACAAGAATGGATAGCAAGCAAGAAGTCGGTTTGTACCCGATTGGCCAGAGCGAGGAAAAGTCAGATGAGGGTAGTGATTACTCTAAAGTAGTTGCAAATGCAATCAAACAAATTGAGTCGCGCATTTTGGCTGTGCAGTTGAGTTCTTTTGGAATGGCGAATTCCTTCAACAACGATGCTAATGAACATGGTTCTTTCAAGCGCGACATTTCATTTAGTCCTTGTACTCCTACTCCTACAGCGCAGATAGAAGAACGGGTAACTCCTCCTCCTACTATTAGTACTACTATTACTAGAAGAGAGTTGAGTGGTATGGACAAGTCTTTTCCTTTGTTGGGTGGAACTCAGTTGCTAACTCGTCAGGCGAGTCAACTACTGTCTCAAAATCCGACTGGGAAGTTTGCTTCTACTTCTAGGGAACATGGTTCCTCCAAGGGCCTGATGGAGAGACTTGGATCGCTGAGGTTCCCTCCGAGTCAACCAGTGAGTCGGAATGAGAAGATGGCAGGTTATGTTAATGGTCTAAGTGTTCCTACGCCAAATCAGGCTCCTATGCACGTTAAGACACCTGATCAAACATGGAAAACCACTCCAGTCCAAAATGCAACTACTAGAAAAATAGGGGCTGCAAGATCTAATCGGTTCGTGCCACCTGAGTCCATAGCTTCTTCAGTTGGACATGGACCTAGTTGTAAGAAGTTGATGAGTCAAACTCGGAGAATTAGTTTAGTGACAAACCAGAGACATCATACAATGACCGTGAAGCCAGTTTTGTTAGATGAACACAAGCCTAGTGGGACACACAAAATGTCTTATGCAGGCCAACAGACGAAGAGAATGCCACGAAAGCAAGTATTGGATATGGAGGAGGAGACTAGCTCAGGTTGTACTGATTCCGAAACATGGTCGACGTGGATAAGTGAGACAAATTCTGAAGCTGAAAGCAGCGCTGGTAGTAATGAATACTCAAGGGAGGATTCCTGGAGTCGAGGCCTATCTAGGAGACGTACTCGTGATATTCATATGAGAATGAGAAGTGATCTCTCTTCCTCAACAAGGTCGATAAATACGGCGGCAGAAGTTAGTGCTAGTAGTAGTTCACGGAATAGTAGCTGTAGCTCATCTATGGAGGGGGAGGAGGAGGATGATGATCTCTATAGCCGTAAAAGATATCCGGACAAGTCAGTTGGACGGTTTAGGAGGCTCAAGAACAGGTTGGGACTCATATTTCACCACCATCACCATCACCATCACCACTATGACAGAAATGGTAATAGTGATGATGATCGCTGCCATACTGGATGGAAACACCTACGGAGGAAGATGTTTGACAGCCACAAAAACCCGCATGGCACCCGAGAAAGCAGAGGGAGCAAAAAATCATTGGTGAAAGTGAAAAACATGTTGCATAATAAGCAGGGGGAGGTTGGGCATTTTCATGCGCTGTTGGAAGGGCTGTTGAGGCACATAAGGCATTCGAAGAAATCCAATAACTACTTGTCAAAGGGAGGAGGAGTAGGAGGAGGAGGAGGAGGAGGAGGAAGAAGTTGCATTATTAGGAAGAAGAAGAAGTTGCATTGGTGGCAAATGTTTCGACGCAGGCGAGTCAAGATGCAGCCGAATAAGGCTAAAAGAGGGCGTGTCAAATTCGGATTCACCGCTAAAAGACGGCCAAAGCTTAAAATCAAGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0007275 GO:0008150 GO:0009555 GO:0009566 GO:0009567 GO:0019953 GO:0022414 GO:0032501 GO:0032502 GO:0044703 GO:0048229 GO:0048856 GO:0051704

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

807

Amino Acids

90.46

Weight (kDa)

9.92

Isoelectric Point (pI)

60.15

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009441)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G63720
fragaria_vesca	FvH4_1g25520 FvH4_1g25520 FvH4_1g25520 FvH4_1g25520 FvH4_1g25520 FvH4_1g25520 FvH4_1g25520 FvH4_5g34270 FvH4_5g34280
malus_domestica	MD15G1138700.v1.1
pyrus_communis	pycom15g12540
rosa_laevigata	RLG00000018766
rosa_multiflora	Rmu_sc0004915.1_g000015
rosa_roxburghii	Rroxscaffold_2G00120470 Rroxscaffold_2G00120480
rosa_rugosa	Rorug02G0246900
rosa_samantha	Rh2AG306000 Rh2BG314000 Rh2CG292300 Rh2DG329800
rosa_wichuraiana	Rw2G024540

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	2 cut(s)	450, 1226
Acc65I	GGTACC	1 cut(s)	544
AccB1I	GGYRCC	2 cut(s)	544, 2081
AccI	GTMKAC	1 cut(s)	1637
AccII	CGCG	3 cut(s)	130, 850, 933
AccIII	TCCGGA	1 cut(s)	1903
AciI	CCGC	6 cut(s)	80, 161, 413, 1802, 2075, 2388
AclWI	GGATC	1 cut(s)	1192
AcoI	YGGCCR	3 cut(s)	77, 772, 2399
AcsI	RAATTY	6 cut(s)	91, 271, 521, 889, 1657, 2375
AcuI	CTGAAG	5 cut(s)	404, 413, 512, 1383, 1683
AfaI	GTAC	8 cut(s)	353, 503, 546, 764, 955, 1012, 1618, 1738
AfeI	AGCGCT	1 cut(s)	1678
AfiI	CCNNNNNNNGG	4 cut(s)	781, 1064, 1632, 1785
AflIII	ACRYGT	3 cut(s)	85, 354, 2130
AgsI	TTSAA	6 cut(s)	96, 178, 190, 325, 898, 928
AjiI	CACGTC	1 cut(s)	1641
AjnI	CCWGG	1 cut(s)	1709
AjuI	GAANNNNNNNTTGG	2 cut(s)	685, 717
AluBI	AGCT	9 cut(s)	113, 212, 391, 1394, 1608, 1667, 1842, 1848, 2407
AluI	AGCT	9 cut(s)	113, 212, 391, 1394, 1608, 1667, 1842, 1848, 2407
Alw26I	GTCTC	7 cut(s)	34, 1113, 1171, 1465, 1595, 1646, 1726
AlwI	GGATC	1 cut(s)	1192
Ama87I	CYCGRG	1 cut(s)	2085
Aor13HI	TCCGGA	1 cut(s)	1903
Aor51HI	AGCGCT	1 cut(s)	1678
AoxI	GGCC	6 cut(s)	77, 772, 1165, 1549, 1720, 2399
ApeKI	GCWGC	5 cut(s)	209, 1355, 1674, 2019, 2344
ApoI	RAATTY	6 cut(s)	91, 271, 521, 889, 1657, 2375
Asp700I	GAANNNNTTC	2 cut(s)	340, 893
Asp718I	GGTACC	1 cut(s)	544
AspLEI	GCGC	6 cut(s)	130, 852, 933, 973, 1679, 2173
AspS9I	GGNCC	3 cut(s)	439, 1165, 1412
AsuHPI	GGTGA	6 cut(s)	1952, 1961, 1967, 1973, 2128, 2377
AsuII	TTCGAA	1 cut(s)	2207
AvaI	CYCGRG	1 cut(s)	2085
AvaII	GGWCC	2 cut(s)	439, 1412
BalI	TGGCCA	1 cut(s)	774
BanI	GGYRCC	2 cut(s)	544, 2081
BarI	GAAGNNNNNNTAC	2 cut(s)	485, 517
BauI	CACGAG	2 cut(s)	121, 1740
BbvCI	CCTCAGC	1 cut(s)	1190
BbvI	GCAGC	5 cut(s)	221, 1342, 1686, 2006, 2356
BccI	CCATC	8 cut(s)	326, 368, 1165, 1225, 1974, 1980, 1986, 2025
BceAI	ACGGC	3 cut(s)	1815, 1875, 2414
BcgI	CGANNNNNNTGC	6 cut(s)	599, 633, 1549, 1583, 2303, 2337
BciT130I	CCWGG	1 cut(s)	1711
BclI	TGATCA	1 cut(s)	1300
BcoDI	GTCTC	7 cut(s)	34, 1113, 1171, 1465, 1595, 1646, 1726
BfaI	CTAG	9 cut(s)	152, 1023, 1143, 1341, 1416, 1521, 1605, 1728, 1818
BfmI	CTRYAG	3 cut(s)	966, 1843, 1885
BfoI	RGCGCY	1 cut(s)	1680
BfuAI	ACCTGC	2 cut(s)	450, 1226
BglII	AGATCT	2 cut(s)	145, 1361
BisI	GCNGC	8 cut(s)	80, 162, 210, 1356, 1675, 1803, 2020, 2345
BlsI	GCNGC	8 cut(s)	81, 163, 211, 1357, 1676, 1804, 2021, 2346
BmcAI	AGTACT	2 cut(s)	503, 1012
Bme1390I	CCNGG	1 cut(s)	1711
Bme18I	GGWCC	2 cut(s)	439, 1412
BmeT110I	CYCGRG	1 cut(s)	2085
BmgBI	CACGTC	1 cut(s)	1641
BmgT120I	GGNCC	3 cut(s)	439, 1165, 1412
BmiI	GGNNCC	5 cut(s)	546, 1156, 1196, 1278, 2083
BmrFI	CCNGG	1 cut(s)	1711
BmrI	ACTGGG	1 cut(s)	1131
BmsI	GCATC	3 cut(s)	438, 895, 2331
BmuI	ACTGGG	1 cut(s)	1131
BplI	GAGNNNNNCTC	8 cut(s)	1183, 1215, 1426, 1458, 1592, 1624, 1723, 1755
BpmI	CTGGAG	4 cut(s)	44, 348, 1305, 1732
Bpu10I	CCTNAGC	2 cut(s)	1190, 1609
Bpu14I	TTCGAA	1 cut(s)	2207
BpuEI	CTTGAG	2 cut(s)	1681, 1919
BsaBI	GATNNNNATC	2 cut(s)	1878, 2013
BsaJI	CCNNGG	3 cut(s)	252, 510, 1161
BsaWI	WCCGGW	1 cut(s)	1903
Bsc4I	CCNNNNNNNGG	4 cut(s)	781, 1064, 1632, 1785
Bse1I	ACTGG	5 cut(s)	1126, 1211, 1322, 1496, 2032
Bse8I	GATNNNNATC	2 cut(s)	1878, 2013
BseAI	TCCGGA	1 cut(s)	1903
BseBI	CCWGG	1 cut(s)	1711
BseDI	CCNNGG	3 cut(s)	252, 510, 1161
BseGI	GGATG	3 cut(s)	379, 1879, 2036
BseJI	GATNNNNATC	2 cut(s)	1878, 2013
BseLI	CCNNNNNNNGG	4 cut(s)	781, 1064, 1632, 1785
BseMII	CTCAG	7 cut(s)	218, 390, 519, 1088, 1181, 1374, 1623
BseNI	ACTGG	5 cut(s)	1126, 1211, 1322, 1496, 2032
BseXI	GCAGC	5 cut(s)	221, 1342, 1686, 2006, 2356
BsgI	GTGCAG	1 cut(s)	884
Bsh1236I	CGCG	3 cut(s)	130, 850, 933
BshFI	GGCC	6 cut(s)	79, 774, 1167, 1551, 1722, 2401
BshNI	GGYRCC	2 cut(s)	544, 2081
BsiHKCI	CYCGRG	1 cut(s)	2085
BsiSI	CCGG	1 cut(s)	1904
BslFI	GGGAC	2 cut(s)	1540, 1962
BslI	CCNNNNNNNGG	4 cut(s)	781, 1064, 1632, 1785
BsmAI	GTCTC	7 cut(s)	34, 1113, 1171, 1465, 1595, 1646, 1726
BsmBI	CGTCTC	1 cut(s)	1726
BsmFI	GGGAC	2 cut(s)	1540, 1962
BsmI	GAATGC	2 cut(s)	1572, 2203
BsnI	GGCC	6 cut(s)	79, 774, 1167, 1551, 1722, 2401
BsoBI	CYCGRG	1 cut(s)	2085
Bsp119I	TTCGAA	1 cut(s)	2207
Bsp13I	TCCGGA	1 cut(s)	1903
Bsp143I	GATC	8 cut(s)	25, 145, 1184, 1300, 1361, 1768, 1879, 2014
BspACI	CCGC	6 cut(s)	80, 161, 413, 1802, 2075, 2388
BspANI	GGCC	6 cut(s)	79, 774, 1167, 1551, 1722, 2401
BspCNI	CTCAG	7 cut(s)	217, 391, 518, 1087, 1182, 1375, 1622
BspEI	TCCGGA	1 cut(s)	1903
BspFNI	CGCG	3 cut(s)	130, 850, 933
BspLI	GGNNCC	5 cut(s)	546, 1156, 1196, 1278, 2083
BspMI	ACCTGC	2 cut(s)	450, 1226
BspPI	GGATC	1 cut(s)	1192
BspT104I	TTCGAA	1 cut(s)	2207
BspT107I	GGYRCC	2 cut(s)	544, 2081
BsrI	ACTGG	5 cut(s)	1126, 1211, 1322, 1496, 2032
BssECI	CCNNGG	3 cut(s)	252, 510, 1161
BssMI	GATC	8 cut(s)	25, 145, 1184, 1300, 1361, 1768, 1879, 2014
BssSI	CACGAG	2 cut(s)	121, 1740
BssT1I	CCWWGG	3 cut(s)	252, 510, 1161
Bst2BI	CACGAG	2 cut(s)	121, 1740
Bst2UI	CCWGG	1 cut(s)	1711
Bst4CI	ACNGT	9 cut(s)	45, 292, 298, 501, 560, 655, 1107, 1489, 1923
Bst6I	CTCTTC	3 cut(s)	1021, 1556, 1780
BstAPI	GCANNNNNTGC	1 cut(s)	228
BstBI	TTCGAA	1 cut(s)	2207
BstC8I	GCNNGC	5 cut(s)	77, 618, 746, 1549, 2330
BstDEI	CTNAG	9 cut(s)	204, 264, 399, 505, 1074, 1190, 1253, 1383, 1609
BstENI	CCTNNNNNAGG	1 cut(s)	1783
BstF5I	GGATG	3 cut(s)	379, 1879, 2036
BstFNI	CGCG	3 cut(s)	130, 850, 933
BstH2I	RGCGCY	1 cut(s)	1680
BstHHI	GCGC	6 cut(s)	130, 852, 933, 973, 1679, 2173
BstKTI	GATC	8 cut(s)	28, 148, 1187, 1303, 1364, 1771, 1882, 2017
BstMAI	GTCTC	7 cut(s)	34, 1113, 1171, 1465, 1595, 1646, 1726
BstMBI	GATC	8 cut(s)	25, 145, 1184, 1300, 1361, 1768, 1879, 2014
BstMWI	GCNNNNNNNGC	7 cut(s)	228, 1576, 2100, 2143, 2191, 2200, 2311
BstNI	CCWGG	1 cut(s)	1711
BstNSI	RCATGY	4 cut(s)	89, 358, 620, 2134
BstSCI	CCNGG	1 cut(s)	1709
BstSFI	CTRYAG	3 cut(s)	966, 1843, 1885
BstUI	CGCG	3 cut(s)	130, 850, 933
BstV1I	GCAGC	5 cut(s)	221, 1342, 1686, 2006, 2356
BstX2I	RGATCY	2 cut(s)	145, 1361
BstYI	RGATCY	2 cut(s)	145, 1361
BsuRI	GGCC	6 cut(s)	79, 774, 1167, 1551, 1722, 2401
BtrI	CACGTC	1 cut(s)	1641
BtsCI	GGATG	3 cut(s)	379, 1879, 2036
BtsIMutI	CAGTG	6 cut(s)	303, 380, 565, 660, 679, 1218
BveI	ACCTGC	2 cut(s)	450, 1226
Cac8I	GCNNGC	5 cut(s)	77, 618, 746, 1549, 2330
CfoI	GCGC	6 cut(s)	130, 852, 933, 973, 1679, 2173
Cfr13I	GGNCC	3 cut(s)	439, 1165, 1412
CseI	GACGC	1 cut(s)	2334
Csp6I	GTAC	8 cut(s)	352, 502, 545, 763, 954, 1011, 1617, 1737
CspCI	CAANNNNNGTGG	4 cut(s)	84, 119, 1504, 1539
CviQI	GTAC	8 cut(s)	352, 502, 545, 763, 954, 1011, 1617, 1737
DdeI	CTNAG	9 cut(s)	204, 264, 399, 505, 1074, 1190, 1253, 1383, 1609
DpnI	GATC	8 cut(s)	27, 147, 1186, 1302, 1363, 1770, 1881, 2016
DpnII	GATC	8 cut(s)	25, 145, 1184, 1300, 1361, 1768, 1879, 2014
EaeI	YGGCCR	3 cut(s)	77, 772, 2399
Eam1104I	CTCTTC	3 cut(s)	1021, 1556, 1780
EarI	CTCTTC	3 cut(s)	1021, 1556, 1780
Eco130I	CCWWGG	3 cut(s)	252, 510, 1161
Eco147I	AGGCCT	1 cut(s)	1722
Eco32I	GATATC	1 cut(s)	1901
Eco47I	GGWCC	2 cut(s)	439, 1412
Eco47III	AGCGCT	1 cut(s)	1678
Eco57I	CTGAAG	5 cut(s)	404, 413, 512, 1383, 1683
Eco88I	CYCGRG	1 cut(s)	2085
EcoNI	CCTNNNNNAGG	1 cut(s)	1783
EcoO109I	RGGNCCY	1 cut(s)	1165
EcoRI	GAATTC	2 cut(s)	271, 889
EcoRII	CCWGG	1 cut(s)	1709
EcoRV	GATATC	1 cut(s)	1901
EcoT14I	CCWWGG	3 cut(s)	252, 510, 1161
EcoT22I	ATGCAT	1 cut(s)	37
ErhI	CCWWGG	3 cut(s)	252, 510, 1161
Esp3I	CGTCTC	1 cut(s)	1726
FaqI	GGGAC	2 cut(s)	1540, 1962
FauI	CCCGC	1 cut(s)	2082
FauNDI	CATATG	1 cut(s)	1752
FbaI	TGATCA	1 cut(s)	1300
FblI	GTMKAC	1 cut(s)	1637
Fnu4HI	GCNGC	8 cut(s)	80, 162, 210, 1356, 1675, 1803, 2020, 2345
FokI	GGATG	3 cut(s)	386, 1886, 2043
Fsp4HI	GCNGC	8 cut(s)	80, 162, 210, 1356, 1675, 1803, 2020, 2345
FspBI	CTAG	9 cut(s)	152, 1023, 1143, 1341, 1416, 1521, 1605, 1728, 1818
GlaI	GCGC	6 cut(s)	129, 851, 932, 972, 1678, 2172
GluI	GCNGC	8 cut(s)	80, 162, 210, 1356, 1675, 1803, 2020, 2345
GsuI	CTGGAG	4 cut(s)	44, 348, 1305, 1732
HaeII	RGCGCY	1 cut(s)	1680
HaeIII	GGCC	6 cut(s)	79, 774, 1167, 1551, 1722, 2401
HapII	CCGG	1 cut(s)	1904
HgaI	GACGC	1 cut(s)	2334
HhaI	GCGC	6 cut(s)	130, 852, 933, 973, 1679, 2173
Hin6I	GCGC	6 cut(s)	128, 850, 931, 971, 1677, 2171
HinP1I	GCGC	6 cut(s)	128, 850, 931, 971, 1677, 2171
HincII	GTYRAC	3 cut(s)	1100, 1208, 1638
HindII	GTYRAC	3 cut(s)	1100, 1208, 1638
HindIII	AAGCTT	2 cut(s)	111, 2405
HpaII	CCGG	1 cut(s)	1904
HphI	GGTGA	6 cut(s)	1952, 1961, 1967, 1973, 2128, 2377
Hpy166II	GTNNAC	5 cut(s)	651, 1100, 1208, 1638, 1829
Hpy8I	GTNNAC	5 cut(s)	651, 1100, 1208, 1638, 1829
Hpy99I	CGWCG	2 cut(s)	1642, 2328
HpyAV	CCTTC	3 cut(s)	65, 904, 2174
HpyCH4III	ACNGT	9 cut(s)	45, 292, 298, 501, 560, 655, 1107, 1489, 1923
HpyCH4IV	ACGT	3 cut(s)	1287, 1640, 1735
HpyF10VI	GCNNNNNNNGC	7 cut(s)	228, 1576, 2100, 2143, 2191, 2200, 2311
HpyF3I	CTNAG	9 cut(s)	204, 264, 399, 505, 1074, 1190, 1253, 1383, 1609
HpySE526I	ACGT	3 cut(s)	1287, 1640, 1735
HspAI	GCGC	6 cut(s)	128, 850, 931, 971, 1677, 2171
Kpn2I	TCCGGA	1 cut(s)	1903
KpnI	GGTACC	1 cut(s)	548
Ksp22I	TGATCA	1 cut(s)	1300
Kzo9I	GATC	8 cut(s)	25, 145, 1184, 1300, 1361, 1768, 1879, 2014
LmnI	GCTCC	3 cut(s)	367, 1282, 2100
Lsp1109I	GCAGC	5 cut(s)	221, 1342, 1686, 2006, 2356
LweI	GCATC	3 cut(s)	438, 895, 2331
MaeI	CTAG	9 cut(s)	152, 1023, 1143, 1341, 1416, 1521, 1605, 1728, 1818
MaeII	ACGT	3 cut(s)	1287, 1640, 1735
MaeIII	GTNAC	4 cut(s)	292, 378, 988, 1459
MalI	GATC	8 cut(s)	27, 147, 1186, 1302, 1363, 1770, 1881, 2016
MboI	GATC	8 cut(s)	25, 145, 1184, 1300, 1361, 1768, 1879, 2014
MfeI	CAATTG	1 cut(s)	134
MflI	RGATCY	2 cut(s)	145, 1361
MlsI	TGGCCA	1 cut(s)	774
MluNI	TGGCCA	1 cut(s)	774
MmeI	TCCRAC	6 cut(s)	752, 1142, 1199, 1384, 1897, 2157
Mox20I	TGGCCA	1 cut(s)	774
Mph1103I	ATGCAT	1 cut(s)	37
MroI	TCCGGA	1 cut(s)	1903
MroXI	GAANNNNTTC	2 cut(s)	340, 893
MscI	TGGCCA	1 cut(s)	774
MseI	TTAA	4 cut(s)	140, 1245, 1290, 2409
MslI	CAYNNNNRTG	3 cut(s)	600, 1986, 2166
Msp20I	TGGCCA	1 cut(s)	774
MspA1I	CMGCKG	1 cut(s)	212
MspI	CCGG	1 cut(s)	1904
MspR9I	CCNGG	1 cut(s)	1711
MunI	CAATTG	1 cut(s)	134
Mva1269I	GAATGC	2 cut(s)	1572, 2203
MvaI	CCWGG	1 cut(s)	1711
MvnI	CGCG	3 cut(s)	130, 850, 933
MwoI	GCNNNNNNNGC	7 cut(s)	228, 1576, 2100, 2143, 2191, 2200, 2311
NdeI	CATATG	1 cut(s)	1752
NdeII	GATC	8 cut(s)	25, 145, 1184, 1300, 1361, 1768, 1879, 2014
NlaIV	GGNNCC	5 cut(s)	546, 1156, 1196, 1278, 2083
NmuCI	GTSAC	2 cut(s)	378, 1459
NsiI	ATGCAT	1 cut(s)	37
NspI	RCATGY	4 cut(s)	89, 358, 620, 2134
NspV	TTCGAA	1 cut(s)	2207
PaeI	GCATGC	1 cut(s)	620
PceI	AGGCCT	1 cut(s)	1722
PciI	ACATGT	3 cut(s)	85, 354, 2130
PcsI	WCGNNNNNNNCGW	1 cut(s)	2329
PctI	GAATGC	2 cut(s)	1572, 2203
PdmI	GAANNNNTTC	2 cut(s)	340, 893
PfeI	GAWTC	7 cut(s)	4, 341, 471, 635, 1622, 1706, 2382
PflFI	GACNNNGTC	1 cut(s)	536
PfoI	TCCNGGA	1 cut(s)	1709
PkrI	GCNGC	8 cut(s)	81, 163, 211, 1357, 1676, 1804, 2021, 2346
PscI	ACATGT	3 cut(s)	85, 354, 2130
Psp6I	CCWGG	1 cut(s)	1709
PspGI	CCWGG	1 cut(s)	1709
PspN4I	GGNNCC	5 cut(s)	546, 1156, 1196, 1278, 2083
PspPI	GGNCC	3 cut(s)	439, 1165, 1412
PsuI	RGATCY	2 cut(s)	145, 1361
PsyI	GACNNNGTC	1 cut(s)	536
PvuII	CAGCTG	1 cut(s)	212
RsaI	GTAC	8 cut(s)	353, 503, 546, 764, 955, 1012, 1618, 1738
RsaNI	GTAC	8 cut(s)	352, 502, 545, 763, 954, 1011, 1617, 1737
RseI	CAYNNNNRTG	3 cut(s)	600, 1986, 2166
SalI	GTCGAC	1 cut(s)	1636
SaqAI	TTAA	4 cut(s)	140, 1245, 1290, 2409
SatI	GCNGC	8 cut(s)	80, 162, 210, 1356, 1675, 1803, 2020, 2345
Sau3AI	GATC	8 cut(s)	25, 145, 1184, 1300, 1361, 1768, 1879, 2014
Sau96I	GGNCC	3 cut(s)	439, 1165, 1412
ScaI	AGTACT	2 cut(s)	503, 1012
ScrFI	CCNGG	1 cut(s)	1711
SfaNI	GCATC	3 cut(s)	438, 895, 2331
SfcI	CTRYAG	3 cut(s)	966, 1843, 1885
SfuI	TTCGAA	1 cut(s)	2207
SinI	GGWCC	2 cut(s)	439, 1412
SmiMI	CAYNNNNRTG	3 cut(s)	600, 1986, 2166
SmlI	CTYRAG	2 cut(s)	1696, 1934
SmoI	CTYRAG	2 cut(s)	1696, 1934
SphI	GCATGC	1 cut(s)	620
SseBI	AGGCCT	1 cut(s)	1722
SsiI	CCGC	6 cut(s)	80, 161, 413, 1802, 2075, 2388
SspMI	CTAG	9 cut(s)	152, 1023, 1143, 1341, 1416, 1521, 1605, 1728, 1818
StuI	AGGCCT	1 cut(s)	1722
StyD4I	CCNGG	1 cut(s)	1709
StyI	CCWWGG	3 cut(s)	252, 510, 1161
TaaI	ACNGT	9 cut(s)	45, 292, 298, 501, 560, 655, 1107, 1489, 1923
TaiI	ACGT	3 cut(s)	1290, 1643, 1738
TaqI	TCGA	7 cut(s)	469, 609, 1637, 1717, 1790, 2207, 2323
TatI	WGTACW	5 cut(s)	351, 501, 953, 1010, 1616
TauI	GCSGC	3 cut(s)	82, 164, 1805
TfiI	GAWTC	7 cut(s)	4, 341, 471, 635, 1622, 1706, 2382
Tru1I	TTAA	4 cut(s)	140, 1245, 1290, 2409
Tru9I	TTAA	4 cut(s)	140, 1245, 1290, 2409
TscAI	CASTG	6 cut(s)	303, 387, 565, 660, 679, 1218
TseFI	GTSAC	2 cut(s)	378, 1459
TseI	GCWGC	5 cut(s)	209, 1355, 1674, 2019, 2344
Tsp45I	GTSAC	2 cut(s)	378, 1459
TspDTI	ATGAA	7 cut(s)	17, 927, 930, 1524, 1704, 1739, 2156
TspGWI	ACGGA	2 cut(s)	1846, 2059
TspRI	CASTG	6 cut(s)	303, 387, 565, 660, 679, 1218
Tth111I	GACNNNGTC	1 cut(s)	536
VpaK11BI	GGWCC	2 cut(s)	439, 1412
XagI	CCTNNNNNAGG	1 cut(s)	1783
XapI	RAATTY	6 cut(s)	91, 271, 521, 889, 1657, 2375
XbaI	TCTAGA	1 cut(s)	151
XceI	RCATGY	4 cut(s)	89, 358, 620, 2134
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1168
XmiI	GTMKAC	1 cut(s)	1637
XmnI	GAANNNNTTC	2 cut(s)	340, 893
XspI	CTAG	9 cut(s)	152, 1023, 1143, 1341, 1416, 1521, 1605, 1728, 1818
ZrmI	AGTACT	2 cut(s)	503, 1012
Zsp2I	ATGCAT	1 cut(s)	37

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.