Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr15

Orthogroup ID

OG0010738

Physical Location & Seq

Genomic Coordinates Reverse (-)

13366075 .. 13368825

Gene Structure 2751 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

MD15G1172300.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2025 bp

ATGTCTTGTTGTTGTGATTTCAGAATATGTCTTACAGTGGACAGATGGGTTAAGATCATCTATCACAACAAACCTCTGCATGGACGTTCGAAAATTCACGTGAAGTTGCGTTTCTTTAACGTAAACCAGGAGTCGAATTGGTCTCGCGGAATAAGAAGTCCTGAATTCCAAGGAGTTCCATACACATTTTTCACTCAGAGGAATGGTTGCAGAGTTACCCTTTATCAAGATGCTCATGTCCCTGAAAATTTCACCCCAAAAATCCCTCTTGCTGGTTCCAAGTGTTATGAACCGCACCGATGCTGGGAAGACATTTTTAATGGCATTTCTAATGCAAAACGCTTGATATACATAGCAGGTTGGTCTGTATGTACTAAAATCACATTAGTAAGGGACCCAAAGAGGCAAATCCCGGGTTGCGATTTGACCCTCGGAGAGCTTCTTAAGAAGAAGGCAGATGAAGGAGTGAAAGTCCTAATGCTTGTGTGGGATGACAGAACTTCAGTGAAGTTGCTAAAGAGAGATGGAGTGATGGCTACTCATGATGAAGACACTGAAAGCTACTTCCACAACACAGCAGTTCATTGCGTGCTGTGTCCCCGAAACCCTGACAACGGGAATAGCATTGTCAAGGATTTACAGGTGTCCACCATGTTTACGCATCACCAGAAGATTGTCGTGGTGGACAGCGAATTGCCTAATGGAGGAGGATTGACTTTAGACACAACACACAAGAATGATCTCCATCAGCCTAATTTTGGGGGCGCTTCGTTCACAAAAGGTGGTCCAAGGGAACCTTGGCACGACATACGTTGTCAGTTGGAAGGGCCTATTGCGTGGGACGTCTTATTCAATTTTGAGCAAAGGTGGAGGAAGCAAGGTGGGAAGGACTTGCTTGTTGAACTCAGAGAGCTAGATGACACATTTATACCACCATCTCCGGTTATGTCCCCTCAAGACCATGATACATGGAATGTTCAGCTGTTTCACTCCATCGATGGAGGAGCTGCATTCGGATTCCCTGACTCCCCCGAAGATGCTGCCAGGGCAGGCCTTGTCACCGGGAAATATCACGTGGTTGACCGAAGCATTCAGGATGCTTACATCAATGCCATTCGGCGCGCAAAGTCTTTTATCTACATCGAAAATCAGTACTTTCTTGGAAGCTCTTTCGGATGGCATTCAGATTATGTTACCCTAAAAGTTGAGGAGGTTGGTGCTTTGCATCTGATCCCAAAGGAACTGTCACTAAAGATTGTTAGTAAGATTGAAGCCGGAGAAAGATTTACGGTTTACATTGTGATGCCAATGTGGCCAGAGGGCATTCCGGAAAGCCAAACCGCTCAGGCAATGTTGCATTGGCAGAGGATGACGATGGACATGATGTATAGGGACATTGTTCAAACTCTCAAAGTCAAGGGGATTGAGGCAAACCCTAAGGATTATTTGGCATTCTTTTGCCTTGGTAACCACGAGAAGAAGCTACCCGGAGAATATGAACCTCCGGAAAAACCAGAACATGGATCAGATTACAGTCGAGCACAACAAGCGAGGCGGTTCATGATCTATGTTCATGCCAAGGTGATGATAGTTGATGATGATTACATAATCATTGGGTCCGCAAACATCAACCAAAGATCAATGGATGGAGCCAGGGATTCGGAGATTGCCATGGGGGCCTACCAACCCTATCATCTATCCACCGGAAAGCCAGCCCGGGGACAAATTCATGGCCTCAGAATGTCATTGTGGTATGAACACTTGGGCCTGCTTGATGACATCTTTCTTGAACCACAAAATGTGGAATGCATAAGAAAGGTGAACCAAATTGCAGACCAGCATTGGGACCTTTATTCATGTGACACATTGGATGGTGACTTGCCAGGGCATTTGCTTAGCTACCCCATTGCAGTTACTGAAAATGGAGAGGTTACAGAATTGCCCGGAACAGAATTTTTTCCCGACACCAAGGCTCGAATTCTCGGGTCGAAATCTGATTTGCTTCCTTCAGTCCTCACTACTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

ko00564 ko00565 ko01100 ko01110 ko04014 ko04024 ko04071 ko04072 ko04144 ko04666 ko04724 ko04912 ko05231 map00564 map00565 map01100 map01110 map04014 map04024 map04071 map04072 map04144 map04666 map04724 map04912 map05231

Pfam Domains

Protein Families

C2 PLD_C PLDc

Protein Analysis

675

Amino Acids

76.7

Weight (kDa)

6.14

Isoelectric Point (pI)

37.58

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PLDc_2	PF13091	521 - 554	3.7e-06	PLD-like domain
PLDc	PF00614	522 - 547	2.4e-07	Phospholipase D Active site motif
PLD_C	PF12357	592 - 664	2.3e-29	Phospholipase D C terminal

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0010738)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G25370 AT5G25370 AT5G25370 AT5G25370
fragaria_vesca	FvH4_1g03170
malus_domestica	MD02G1030700.v1.1 MD15G1172300.v1.1
prunus_persica	Prupe.7G243800_v2.0.a1
pyrus_communis	pycom02g02560 pycom15g15370
rosa_chinensis	RchiOBHm_Chr2g0088301
rosa_laevigata	RLG00000015940
rosa_multiflora	Rmu_sc0004235.1_g000036
rosa_roxburghii	Rroxscaffold_2G00152760
rosa_rugosa	Rorug01G0482700
rosa_samantha	Rh2AG037800 Rh2BG037000 Rh2CG038100 Rh2DG037500
rosa_wichuraiana	Rw2G002980

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	846
Acc36I	ACCTGC	1 cut(s)	347
AccB7I	CCANNNNNTGG	1 cut(s)	1520
AccBSI	CCGCTC	1 cut(s)	1343
AccII	CGCG	2 cut(s)	147, 1122
AccIII	TCCGGA	2 cut(s)	1327, 1504
AciI	CCGC	5 cut(s)	147, 293, 1341, 1555, 1620
AclWI	GGATC	2 cut(s)	1225, 1531
AcoI	YGGCCR	1 cut(s)	1313
AcsI	RAATTY	6 cut(s)	93, 164, 247, 1725, 1952, 1977
AcuI	CTGAAG	2 cut(s)	486, 1992
AcvI	CACGTG	2 cut(s)	100, 1075
AcyI	GRCGYC	1 cut(s)	843
AfaI	GTAC	2 cut(s)	373, 1154
AfiI	CCNNNNNNNGG	9 cut(s)	80, 272, 304, 614, 704, 758, 1520, 1718, 1843
AflII	CTTAAG	1 cut(s)	443
AgsI	TTSAA	5 cut(s)	853, 902, 1271, 1403, 1790
AjnI	CCWGG	4 cut(s)	126, 1043, 1652, 1882
AluBI	AGCT	8 cut(s)	439, 561, 913, 982, 1007, 1167, 1483, 1899
AluI	AGCT	8 cut(s)	439, 561, 913, 982, 1007, 1167, 1483, 1899
Alw21I	GWGCWC	1 cut(s)	1543
Alw26I	GTCTC	1 cut(s)	147
AlwI	GGATC	2 cut(s)	1225, 1531
AlwNI	CAGNNNCTG	1 cut(s)	1916
Ama87I	CYCGRG	3 cut(s)	412, 1716, 1982
Aor13HI	TCCGGA	2 cut(s)	1327, 1504
AoxI	GGCC	6 cut(s)	827, 1051, 1313, 1677, 1732, 1765
ApeKI	GCWGC	2 cut(s)	1007, 1040
ApoI	RAATTY	6 cut(s)	93, 164, 247, 1725, 1952, 1977
ArsI	GACNNNNNNTTYG	2 cut(s)	1229, 1261
Asp700I	GAANNNNTTC	1 cut(s)	1956
AspLEI	GCGC	3 cut(s)	767, 1122, 1124
AspS9I	GGNCC	7 cut(s)	394, 785, 827, 1617, 1677, 1765, 1846
AsuC2I	CCSGG	7 cut(s)	413, 414, 1063, 1488, 1717, 1718, 1944
AsuHPI	GGTGA	6 cut(s)	244, 656, 1051, 1594, 1831, 1886
AsuII	TTCGAA	1 cut(s)	89
AvaI	CYCGRG	3 cut(s)	412, 1716, 1982
AvaII	GGWCC	4 cut(s)	394, 785, 1617, 1846
AxyI	CCTNAGG	1 cut(s)	1437
BalI	TGGCCA	1 cut(s)	1315
BauI	CACGAG	1 cut(s)	1472
BbrPI	CACGTG	2 cut(s)	100, 1075
BbsI	GAAGAC	2 cut(s)	315, 555
Bbv12I	GWGCWC	1 cut(s)	1543
BbvI	GCAGC	2 cut(s)	994, 1027
BcgI	CGANNNNNNTGC	2 cut(s)	1022, 1056
BciT130I	CCWGG	4 cut(s)	128, 1045, 1654, 1884
BcnI	CCSGG	7 cut(s)	413, 414, 1063, 1488, 1717, 1718, 1944
BcoDI	GTCTC	1 cut(s)	147
BfaI	CTAG	1 cut(s)	914
BfoI	RGCGCY	1 cut(s)	768
BfrI	CTTAAG	1 cut(s)	443
BfuAI	ACCTGC	1 cut(s)	347
BglI	GCCNNNNNGGC	2 cut(s)	1312, 1676
BisI	GCNGC	2 cut(s)	1008, 1041
BlpI	GCTNAGC	1 cut(s)	1895
BlsI	GCNGC	2 cut(s)	1009, 1042
BmcAI	AGTACT	1 cut(s)	1154
Bme18I	GGWCC	4 cut(s)	394, 785, 1617, 1846
BmeT110I	CYCGRG	3 cut(s)	412, 1716, 1982
BmgT120I	GGNCC	7 cut(s)	394, 785, 827, 1617, 1677, 1765, 1846
BmiI	GGNNCC	8 cut(s)	277, 395, 396, 795, 1618, 1651, 1678, 1847
BmsI	GCATC	7 cut(s)	220, 290, 670, 1027, 1087, 1234, 1293
BpiI	GAAGAC	2 cut(s)	315, 555
Bpu10I	CCTNAGC	1 cut(s)	1344
Bpu1102I	GCTNAGC	1 cut(s)	1895
Bpu14I	TTCGAA	1 cut(s)	89
BpuEI	CTTGAG	1 cut(s)	939
BpuMI	CCSGG	7 cut(s)	413, 414, 1063, 1488, 1717, 1718, 1944
Bsa29I	ATCGAT	1 cut(s)	996
BsaAI	YACGTR	2 cut(s)	100, 1075
BsaBI	GATNNNNATC	1 cut(s)	744
BsaHI	GRCGYC	1 cut(s)	843
BsaI	GGTCTC	1 cut(s)	147
BsaWI	WCCGGW	4 cut(s)	940, 1327, 1504, 1703
BsaXI	ACNNNNNCTCC	2 cut(s)	456, 486
Bsc4I	CCNNNNNNNGG	9 cut(s)	80, 272, 304, 614, 704, 758, 1520, 1718, 1843
Bse21I	CCTNAGG	1 cut(s)	1437
Bse3DI	GCAATG	3 cut(s)	583, 1356, 1905
Bse8I	GATNNNNATC	1 cut(s)	744
BseAI	TCCGGA	2 cut(s)	1327, 1504
BseBI	CCWGG	4 cut(s)	128, 1045, 1654, 1884
BseCI	ATCGAT	1 cut(s)	996
BseGI	GGATG	6 cut(s)	496, 1102, 1181, 1374, 1651, 1876
BseJI	GATNNNNATC	1 cut(s)	744
BseLI	CCNNNNNNNGG	9 cut(s)	80, 272, 304, 614, 704, 758, 1520, 1718, 1843
BseMI	GCAATG	3 cut(s)	583, 1356, 1905
BseMII	CTCAG	4 cut(s)	209, 919, 1358, 1750
BsePI	GCGCGC	1 cut(s)	1120
BseRI	GAGGAG	3 cut(s)	720, 1017, 1223
BseXI	GCAGC	2 cut(s)	994, 1027
BseYI	CCCAGC	1 cut(s)	303
Bsh1236I	CGCG	2 cut(s)	147, 1122
BshFI	GGCC	6 cut(s)	829, 1053, 1315, 1679, 1734, 1767
BshVI	ATCGAT	1 cut(s)	996
BsiHKAI	GWGCWC	1 cut(s)	1543
BsiHKCI	CYCGRG	3 cut(s)	412, 1716, 1982
BslFI	GGGAC	8 cut(s)	224, 407, 582, 854, 934, 1406, 1734, 1859
BslI	CCNNNNNNNGG	9 cut(s)	80, 272, 304, 614, 704, 758, 1520, 1718, 1843
BsmAI	GTCTC	1 cut(s)	147
BsmFI	GGGAC	8 cut(s)	224, 407, 582, 854, 934, 1406, 1734, 1859
BsmI	GAATGC	6 cut(s)	1010, 1089, 1180, 1323, 1451, 1811
BsnI	GGCC	6 cut(s)	829, 1053, 1315, 1679, 1734, 1767
Bso31I	GGTCTC	1 cut(s)	147
BsoBI	CYCGRG	3 cut(s)	412, 1716, 1982
Bsp119I	TTCGAA	1 cut(s)	89
Bsp1286I	GDGCHC	1 cut(s)	1543
Bsp13I	TCCGGA	2 cut(s)	1327, 1504
Bsp143I	GATC	6 cut(s)	54, 739, 1230, 1523, 1563, 1637
Bsp1720I	GCTNAGC	1 cut(s)	1895
Bsp19I	CCATGG	1 cut(s)	1671
BspACI	CCGC	5 cut(s)	147, 293, 1341, 1555, 1620
BspANI	GGCC	6 cut(s)	829, 1053, 1315, 1679, 1734, 1767
BspCNI	CTCAG	4 cut(s)	208, 918, 1357, 1749
BspDI	ATCGAT	1 cut(s)	996
BspEI	TCCGGA	2 cut(s)	1327, 1504
BspFNI	CGCG	2 cut(s)	147, 1122
BspHI	TCATGA	2 cut(s)	541, 1560
BspLI	GGNNCC	8 cut(s)	277, 395, 396, 795, 1618, 1651, 1678, 1847
BspMI	ACCTGC	1 cut(s)	347
BspPI	GGATC	2 cut(s)	1225, 1531
BspT104I	TTCGAA	1 cut(s)	89
BspTI	CTTAAG	1 cut(s)	443
BspTNI	GGTCTC	1 cut(s)	147
BsrBI	CCGCTC	1 cut(s)	1343
BsrDI	GCAATG	3 cut(s)	583, 1356, 1905
BssHII	GCGCGC	1 cut(s)	1120
BssMI	GATC	6 cut(s)	54, 739, 1230, 1523, 1563, 1637
BssNI	GRCGYC	1 cut(s)	843
BssSI	CACGAG	1 cut(s)	1472
BssT1I	CCWWGG	7 cut(s)	169, 788, 797, 1462, 1578, 1671, 1968
Bst2BI	CACGAG	1 cut(s)	1472
Bst2UI	CCWGG	4 cut(s)	128, 1045, 1654, 1884
Bst4CI	ACNGT	4 cut(s)	37, 1245, 1291, 1535
BstACI	GRCGYC	1 cut(s)	843
BstAFI	CTTAAG	1 cut(s)	443
BstBAI	YACGTR	2 cut(s)	100, 1075
BstBI	TTCGAA	1 cut(s)	89
BstC8I	GCNNGC	5 cut(s)	590, 1051, 1122, 1713, 1769
BstDEI	CTNAG	7 cut(s)	195, 905, 1344, 1437, 1736, 1895, 2022
BstDSI	CCRYGG	1 cut(s)	1671
BstEII	GGTNACC	1 cut(s)	1466
BstENI	CCTNNNNNAGG	1 cut(s)	702
BstF5I	GGATG	6 cut(s)	496, 1102, 1181, 1374, 1651, 1876
BstFNI	CGCG	2 cut(s)	147, 1122
BstH2I	RGCGCY	1 cut(s)	768
BstHHI	GCGC	3 cut(s)	767, 1122, 1124
BstKTI	GATC	6 cut(s)	57, 742, 1233, 1526, 1566, 1640
BstMAI	GTCTC	1 cut(s)	147
BstMBI	GATC	6 cut(s)	54, 739, 1230, 1523, 1563, 1637
BstMWI	GCNNNNNNNGC	4 cut(s)	1046, 1312, 1547, 1676
BstNI	CCWGG	4 cut(s)	128, 1045, 1654, 1884
BstPI	GGTNACC	1 cut(s)	1466
BstUI	CGCG	2 cut(s)	147, 1122
BstV1I	GCAGC	2 cut(s)	994, 1027
BstV2I	GAAGAC	2 cut(s)	315, 555
Bsu15I	ATCGAT	1 cut(s)	996
Bsu36I	CCTNAGG	1 cut(s)	1437
BsuRI	GGCC	6 cut(s)	829, 1053, 1315, 1679, 1734, 1767
BsuTUI	ATCGAT	1 cut(s)	996
BtgI	CCRYGG	1 cut(s)	1671
BtsCI	GGATG	6 cut(s)	496, 1102, 1181, 1374, 1651, 1876
BtsIMutI	CAGTG	3 cut(s)	42, 510, 552
BveI	ACCTGC	1 cut(s)	347
Cac8I	GCNNGC	5 cut(s)	590, 1051, 1122, 1713, 1769
CaiI	CAGNNNCTG	1 cut(s)	1916
CciI	TCATGA	2 cut(s)	541, 1560
CfoI	GCGC	3 cut(s)	767, 1122, 1124
Cfr13I	GGNCC	7 cut(s)	394, 785, 827, 1617, 1677, 1765, 1846
Cfr9I	CCCGGG	2 cut(s)	412, 1716
ClaI	ATCGAT	1 cut(s)	996
Csp6I	GTAC	2 cut(s)	372, 1153
CviQI	GTAC	2 cut(s)	372, 1153
DdeI	CTNAG	7 cut(s)	195, 905, 1344, 1437, 1736, 1895, 2022
DpnI	GATC	6 cut(s)	56, 741, 1232, 1525, 1565, 1639
DpnII	GATC	6 cut(s)	54, 739, 1230, 1523, 1563, 1637
EaeI	YGGCCR	1 cut(s)	1313
Eco130I	CCWWGG	7 cut(s)	169, 788, 797, 1462, 1578, 1671, 1968
Eco147I	AGGCCT	1 cut(s)	1053
Eco31I	GGTCTC	1 cut(s)	147
Eco47I	GGWCC	4 cut(s)	394, 785, 1617, 1846
Eco57I	CTGAAG	2 cut(s)	486, 1992
Eco72I	CACGTG	2 cut(s)	100, 1075
Eco81I	CCTNAGG	1 cut(s)	1437
Eco88I	CYCGRG	3 cut(s)	412, 1716, 1982
Eco91I	GGTNACC	1 cut(s)	1466
EcoNI	CCTNNNNNAGG	1 cut(s)	702
EcoO109I	RGGNCCY	4 cut(s)	394, 827, 1677, 1846
EcoO65I	GGTNACC	1 cut(s)	1466
EcoRI	GAATTC	2 cut(s)	164, 1977
EcoRII	CCWGG	4 cut(s)	126, 1043, 1652, 1882
EcoT14I	CCWWGG	7 cut(s)	169, 788, 797, 1462, 1578, 1671, 1968
EcoT22I	ATGCAT	1 cut(s)	1811
ErhI	CCWWGG	7 cut(s)	169, 788, 797, 1462, 1578, 1671, 1968
FalI	AAGNNNNNCTT	2 cut(s)	781, 813
FaqI	GGGAC	8 cut(s)	224, 407, 582, 854, 934, 1406, 1734, 1859
Fnu4HI	GCNGC	2 cut(s)	1008, 1041
FokI	GGATG	6 cut(s)	503, 1109, 1188, 1381, 1658, 1883
Fsp4HI	GCNGC	2 cut(s)	1008, 1041
FspBI	CTAG	1 cut(s)	914
GlaI	GCGC	3 cut(s)	766, 1121, 1123
GluI	GCNGC	2 cut(s)	1008, 1041
GsaI	CCCAGC	1 cut(s)	307
HaeII	RGCGCY	1 cut(s)	768
HaeIII	GGCC	6 cut(s)	829, 1053, 1315, 1679, 1734, 1767
HhaI	GCGC	3 cut(s)	767, 1122, 1124
Hin1I	GRCGYC	1 cut(s)	843
Hin6I	GCGC	3 cut(s)	765, 1120, 1122
HinP1I	GCGC	3 cut(s)	765, 1120, 1122
HincII	GTYRAC	1 cut(s)	1081
HindII	GTYRAC	1 cut(s)	1081
HinfI	GANTC	4 cut(s)	131, 1017, 1025, 1658
HphI	GGTGA	6 cut(s)	244, 656, 1051, 1594, 1831, 1886
Hpy166II	GTNNAC	9 cut(s)	40, 124, 648, 657, 685, 774, 1081, 1294, 1822
Hpy8I	GTNNAC	9 cut(s)	40, 124, 648, 657, 685, 774, 1081, 1294, 1822
HpyAV	CCTTC	5 cut(s)	445, 455, 818, 880, 2016
HpyCH4III	ACNGT	4 cut(s)	37, 1245, 1291, 1535
HpyCH4IV	ACGT	6 cut(s)	85, 99, 120, 811, 843, 1074
HpyCH4V	TGCA	9 cut(s)	79, 210, 335, 1010, 1225, 1357, 1809, 1832, 1910
HpyF10VI	GCNNNNNNNGC	4 cut(s)	1046, 1312, 1547, 1676
HpyF3I	CTNAG	7 cut(s)	195, 905, 1344, 1437, 1736, 1895, 2022
HpySE526I	ACGT	6 cut(s)	85, 99, 120, 811, 843, 1074
Hsp92I	GRCGYC	1 cut(s)	843
HspAI	GCGC	3 cut(s)	765, 1120, 1122
KflI	GGGWCCC	1 cut(s)	394
Kpn2I	TCCGGA	2 cut(s)	1327, 1504
Kzo9I	GATC	6 cut(s)	54, 739, 1230, 1523, 1563, 1637
LmnI	GCTCC	2 cut(s)	1004, 1649
Lsp1109I	GCAGC	2 cut(s)	994, 1027
LweI	GCATC	7 cut(s)	220, 290, 670, 1027, 1087, 1234, 1293
MaeI	CTAG	1 cut(s)	914
MaeII	ACGT	6 cut(s)	85, 99, 120, 811, 843, 1074
MaeIII	GTNAC	9 cut(s)	214, 1057, 1192, 1245, 1466, 1859, 1874, 1912, 1930
MalI	GATC	6 cut(s)	56, 741, 1232, 1525, 1565, 1639
MbiI	CCGCTC	1 cut(s)	1343
MboI	GATC	6 cut(s)	54, 739, 1230, 1523, 1563, 1637
MboII	GAAGA	6 cut(s)	320, 460, 560, 682, 1046, 1489
MhlI	GDGCHC	1 cut(s)	1543
MlsI	TGGCCA	1 cut(s)	1315
MluNI	TGGCCA	1 cut(s)	1315
MlyI	GAGTC	2 cut(s)	140, 1019
MmeI	TCCRAC	1 cut(s)	801
Mox20I	TGGCCA	1 cut(s)	1315
Mph1103I	ATGCAT	1 cut(s)	1811
MroI	TCCGGA	2 cut(s)	1327, 1504
MroXI	GAANNNNTTC	1 cut(s)	1956
MscI	TGGCCA	1 cut(s)	1315
MseI	TTAA	4 cut(s)	51, 117, 318, 444
MslI	CAYNNNNRTG	2 cut(s)	735, 1301
Msp20I	TGGCCA	1 cut(s)	1315
MspA1I	CMGCKG	1 cut(s)	982
MspCI	CTTAAG	1 cut(s)	443
Mva1269I	GAATGC	6 cut(s)	1010, 1089, 1180, 1323, 1451, 1811
MvaI	CCWGG	4 cut(s)	128, 1045, 1654, 1884
MvnI	CGCG	2 cut(s)	147, 1122
MwoI	GCNNNNNNNGC	4 cut(s)	1046, 1312, 1547, 1676
NciI	CCSGG	7 cut(s)	413, 414, 1063, 1488, 1717, 1718, 1944
NcoI	CCATGG	1 cut(s)	1671
NdeII	GATC	6 cut(s)	54, 739, 1230, 1523, 1563, 1637
NlaIV	GGNNCC	8 cut(s)	277, 395, 396, 795, 1618, 1651, 1678, 1847
NmuCI	GTSAC	4 cut(s)	1057, 1245, 1859, 1874
NsiI	ATGCAT	1 cut(s)	1811
NspV	TTCGAA	1 cut(s)	89
PagI	TCATGA	2 cut(s)	541, 1560
PauI	GCGCGC	1 cut(s)	1120
PceI	AGGCCT	1 cut(s)	1053
PctI	GAATGC	6 cut(s)	1010, 1089, 1180, 1323, 1451, 1811
PdmI	GAANNNNTTC	1 cut(s)	1956
PfeI	GAWTC	2 cut(s)	1017, 1658
PflMI	CCANNNNNTGG	1 cut(s)	1520
PkrI	GCNGC	2 cut(s)	1009, 1042
PleI	GAGTC	2 cut(s)	139, 1019
PmaCI	CACGTG	2 cut(s)	100, 1075
PmlI	CACGTG	2 cut(s)	100, 1075
PpsI	GAGTC	2 cut(s)	139, 1019
Ppu21I	YACGTR	2 cut(s)	100, 1075
PpuMI	RGGWCCY	2 cut(s)	394, 1846
Psp5II	RGGWCCY	2 cut(s)	394, 1846
Psp6I	CCWGG	4 cut(s)	126, 1043, 1652, 1882
PspCI	CACGTG	2 cut(s)	100, 1075
PspEI	GGTNACC	1 cut(s)	1466
PspFI	CCCAGC	1 cut(s)	303
PspGI	CCWGG	4 cut(s)	126, 1043, 1652, 1882
PspN4I	GGNNCC	8 cut(s)	277, 395, 396, 795, 1618, 1651, 1678, 1847
PspPI	GGNCC	7 cut(s)	394, 785, 827, 1617, 1677, 1765, 1846
PspPPI	RGGWCCY	2 cut(s)	394, 1846
PstNI	CAGNNNCTG	1 cut(s)	1916
PteI	GCGCGC	1 cut(s)	1120
PvuII	CAGCTG	1 cut(s)	982
RsaI	GTAC	2 cut(s)	373, 1154
RsaNI	GTAC	2 cut(s)	372, 1153
RseI	CAYNNNNRTG	2 cut(s)	735, 1301
SaqAI	TTAA	4 cut(s)	51, 117, 318, 444
SatI	GCNGC	2 cut(s)	1008, 1041
Sau3AI	GATC	6 cut(s)	54, 739, 1230, 1523, 1563, 1637
Sau96I	GGNCC	7 cut(s)	394, 785, 827, 1617, 1677, 1765, 1846
ScaI	AGTACT	1 cut(s)	1154
SchI	GAGTC	2 cut(s)	140, 1019
SduI	GDGCHC	1 cut(s)	1543
SfaNI	GCATC	7 cut(s)	220, 290, 670, 1027, 1087, 1234, 1293
SfuI	TTCGAA	1 cut(s)	89
SinI	GGWCC	4 cut(s)	394, 785, 1617, 1846
SmaI	CCCGGG	2 cut(s)	414, 1718
SmiMI	CAYNNNNRTG	2 cut(s)	735, 1301
SmlI	CTYRAG	2 cut(s)	443, 954
SmoI	CTYRAG	2 cut(s)	443, 954
SseBI	AGGCCT	1 cut(s)	1053
SsiI	CCGC	5 cut(s)	147, 293, 1341, 1555, 1620
SspMI	CTAG	1 cut(s)	914
StuI	AGGCCT	1 cut(s)	1053
StyI	CCWWGG	7 cut(s)	169, 788, 797, 1462, 1578, 1671, 1968
TaaI	ACNGT	4 cut(s)	37, 1245, 1291, 1535
TaiI	ACGT	6 cut(s)	88, 102, 123, 814, 846, 1077
TaqI	TCGA	7 cut(s)	89, 134, 996, 1143, 1537, 1975, 1988
TaqII	GACCGA	1 cut(s)	1098
TatI	WGTACW	2 cut(s)	371, 1152
TfiI	GAWTC	2 cut(s)	1017, 1658
Tru1I	TTAA	4 cut(s)	51, 117, 318, 444
Tru9I	TTAA	4 cut(s)	51, 117, 318, 444
TscAI	CASTG	3 cut(s)	42, 510, 559
TseFI	GTSAC	4 cut(s)	1057, 1245, 1859, 1874
TseI	GCWGC	2 cut(s)	1007, 1040
Tsp45I	GTSAC	4 cut(s)	1057, 1245, 1859, 1874
TspMI	CCCGGG	2 cut(s)	412, 1716
TspRI	CASTG	3 cut(s)	42, 510, 559
Van91I	CCANNNNNTGG	1 cut(s)	1520
Vha464I	CTTAAG	1 cut(s)	443
VpaK11BI	GGWCC	4 cut(s)	394, 785, 1617, 1846
XagI	CCTNNNNNAGG	1 cut(s)	702
XapI	RAATTY	6 cut(s)	93, 164, 247, 1725, 1952, 1977
XcmI	CCANNNNNNNNNTGG	1 cut(s)	795
XmaI	CCCGGG	2 cut(s)	412, 1716
XmnI	GAANNNNTTC	1 cut(s)	1956
XspI	CTAG	1 cut(s)	914
ZraI	GACGTC	1 cut(s)	844
ZrmI	AGTACT	1 cut(s)	1154
Zsp2I	ATGCAT	1 cut(s)	1811

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.