MD15G1184800.v1.1

monooxygenase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr15
OG0010803
Physical Location & Seq
Reverse (-)
14580569 .. 14584004
3436 bp
Loading structure...
UTR
Exon/CDS
Intron
MD15G1184800.v1.1.491

Sequence Viewer

Length: 1314 bp
ATGGACTTTCTGAAAGAATTGGAAGGAAAGCGAGTTCATGATCCTTTTGCAGCAAACATGGCAACTAAACCTACAGCAAAGCGCATATGGGTTCTGGGGCCCATCATCGTCGGAGCTGGTCCTTCTGGCTTAGCAGTTGCTGCTTGTCTTAAAGAAAAAGGTATTCCAAGCTTGATCCTTGAAAGGGCTAACTGCATAGCTTCGTTATGGCAGCTCAAGACCTACGACCGTCTCCGGCTTCATCTACCCAAGAAATTCTGTGAGCTCATACTCATGCCATTCCCTTCAGATTTTCCCACTTACCCAACAAAGCAGCAGTTTGTGGGTTACCTAAATGCTTACGCGGAAAATTTTGATTTGAAGCCTGCTTTCAACAGGACAGTGGTGAGTGCAAGGTATGATAGTAGATGTGAGCATTGGTTTGTTAATACTTTGGGATTGAAAAATGAGGAGACTGAGTATGTTTGTCAATGGCTAATTGTTGCCACTGGTGAAAATGCTGAGGAAGTTGTACCACAATTTGAAGGGGTGAGTGAGTTTGGTGGGCCTATCGTCCACACTAGCTCTTACAAGAGTGGTGAGTTGTTTAGGGGAAAGAAGGTTTTGGTGGTTGGATCTGGTAATTCAGGCATGGAGGTTAGTTTGGATCTATGCAACTACAATGCACGCCCTTCCCTAGTCGTAAAAGATTCGGTGCACATCTTGCCGCAAGAGATACTGGGAATATCAACTTTTGGATTGTCCATGTGGTTGCTCAAGTGGCTCCCCATGCGCTTTGTGGATCATCTTTTGCTTCTTGTTGCACGCTTCATGCTCGGAGACACTGCTCGGTTTGGAATCTACCGCCCTGAGCGTGGCCCTCTTGAGCTCAAGAGCATGACTGGCAAGACACCTGTTTTGGACATTGGCACCCTTGCTAAGATCAAAACTGGCCACATCAAGGTTTGCAAGGCAGTAAAGCAACTAAAGCATCAAGCTGTGGAGTTTATAGATGGAAGAGTAGAGAATTTCGATGCCATCATTTATGCAACGGGCTACAGAAGTAATGTAATGTCTTGGTTGAAGGAAACTAGCATGTTTTCTGAAAAAGATGGGTTGCCTCGGAAGCCATTCCCGAACGGATGGAAAGGGGAATGTGGGTTGTACTCAGTGGGGTTTACACAACGTGGTCTGCTGGGTGCATCTCTTGATGCAAGGAGAATTGCAGAGGATATTGAGCATAGCTGGAAAGCTGAGGCCACGCATTTCATGGCTTTCACTACTTGTGCACTGCCACCGCCACCACCACCACAACCTGCTGCTTCAATTAATTAA

Protein Analysis

438

Amino Acids

48.73

Weight (kDa)

8.8

Isoelectric Point (pI)

35.48

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pyr_redox_3 PF13738 35 - 231 1.4e-22 Pyridine nucleotide-disulphide oxidoreductase
Pyr_redox_2 PF07992 35 - 227 5.9e-10 Pyridine nucleotide-disulphide oxidoreductase
FMO-like PF00743 36 - 356 3.9e-28 Flavin-binding monooxygenase-like
Lys_Orn_oxgnase PF13434 100 - 222 6.5e-12 L-lysine 6-monooxygenase/L-ornithine 5-monooxygenase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0010803)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G13260 AT4G13260 AT4G13260
fragaria_vesca FvH4_1g04800
malus_domestica MD01G1067600.v1.1 MD02G1046700.v1.1 MD15G1184800.v1.1
prunus_persica Prupe.7G231200_v2.0.a1
pyrus_communis pycom02g03910 pycom15g16630
rosa_chinensis RchiOBHm_Chr2g0090431
rosa_laevigata RLG00000016108
rosa_multiflora Rmu_sc0004514.1_g000016
rosa_roxburghii Rroxscaffold_2G00151160
rosa_rugosa Rorug02G0008000
rosa_samantha Rh2AG053400 Rh2BG052700 Rh2CG054800 Rh2DG053600
rosa_wichuraiana Rw2G004360

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1303
AccB1I GGYRCC 1 cut(s) 908
AccII CGCG 1 cut(s) 344
AciI CCGC 4 cut(s) 344, 707, 844, 1277
AclWI GGATC 5 cut(s) 35, 169, 622, 654, 789
AcoI YGGCCR 1 cut(s) 931
AcsI RAATTY 3 cut(s) 254, 349, 1006
AcuI CTGAAG 1 cut(s) 270
AdeI CACNNNGTG 1 cut(s) 1166
AfaI GTAC 2 cut(s) 513, 1145
AfiI CCNNNNNNNGG 3 cut(s) 184, 854, 940
AgsI TTSAA 7 cut(s) 182, 361, 373, 442, 524, 1063, 1305
AloI GAACNNNNNNTCC 2 cut(s) 18, 50
Alw21I GWGCWC 4 cut(s) 267, 699, 870, 1270
Alw26I GTCTC 3 cut(s) 236, 446, 813
Alw44I GTGCAC 2 cut(s) 695, 1266
AlwI GGATC 5 cut(s) 35, 169, 622, 654, 789
AlwNI CAGNNNCTG 1 cut(s) 140
AoxI GGCC 5 cut(s) 98, 545, 856, 931, 1236
ApaI GGGCCC 1 cut(s) 102
ApaLI GTGCAC 2 cut(s) 695, 1266
ApeKI GCWGC 5 cut(s) 50, 140, 211, 313, 1298
ApoI RAATTY 3 cut(s) 254, 349, 1006
ArsI GACNNNNNNTTYG 2 cut(s) 880, 912
AseI ATTAAT 1 cut(s) 1308
Asp700I GAANNNNTTC 1 cut(s) 1109
AspLEI GCGC 2 cut(s) 84, 774
AspS9I GGNCC 5 cut(s) 98, 99, 119, 545, 857
AsuHPI GGTGA 4 cut(s) 397, 503, 541, 590
AvaII GGWCC 1 cut(s) 119
BaeGI GKGCMC 3 cut(s) 102, 699, 1270
BalI TGGCCA 1 cut(s) 933
BanI GGYRCC 1 cut(s) 908
BanII GRGCYC 3 cut(s) 102, 267, 870
Bbv12I GWGCWC 4 cut(s) 267, 699, 870, 1270
BbvCI CCTCAGC 2 cut(s) 501, 1233
BbvI GCAGC 5 cut(s) 62, 127, 223, 325, 1285
BccI CCATC 5 cut(s) 110, 986, 1025, 1085, 1116
BcoDI GTCTC 3 cut(s) 236, 446, 813
BfaI CTAG 3 cut(s) 561, 677, 1071
BfmI CTRYAG 2 cut(s) 72, 1036
BfuAI ACCTGC 1 cut(s) 1303
BisI GCNGC 6 cut(s) 51, 141, 212, 314, 707, 1299
BlpI GCTNAGC 1 cut(s) 130
BlsI GCNGC 6 cut(s) 52, 142, 213, 315, 708, 1300
Bme18I GGWCC 1 cut(s) 119
BmgT120I GGNCC 5 cut(s) 98, 99, 119, 545, 857
BmiI GGNNCC 4 cut(s) 99, 100, 764, 910
BmrI ACTGGG 1 cut(s) 728
BmsI GCATC 4 cut(s) 979, 1003, 1180, 1190
BmuI ACTGGG 1 cut(s) 728
Bpu10I CCTNAGC 3 cut(s) 501, 849, 1233
Bpu1102I GCTNAGC 1 cut(s) 130
BpuEI CTTGAG 4 cut(s) 200, 740, 854, 884
BsaJI CCNNGG 1 cut(s) 1100
BsaXI ACNNNNNCTCC 2 cut(s) 443, 473
Bsc4I CCNNNNNNNGG 3 cut(s) 184, 854, 940
Bse1I ACTGG 4 cut(s) 493, 723, 886, 934
BseDI CCNNGG 1 cut(s) 1100
BseGI GGATG 1 cut(s) 1127
BseLI CCNNNNNNNGG 3 cut(s) 184, 854, 940
BseMII CTCAG 5 cut(s) 447, 492, 840, 1161, 1224
BseNI ACTGG 4 cut(s) 493, 723, 886, 934
BseRI GAGGAG 1 cut(s) 464
BseSI GKGCMC 3 cut(s) 102, 699, 1270
BseXI GCAGC 5 cut(s) 62, 127, 223, 325, 1285
BseYI CCCAGC 1 cut(s) 1174
Bsh1236I CGCG 1 cut(s) 344
Bsh1285I CGRYCG 1 cut(s) 229
BshFI GGCC 5 cut(s) 100, 547, 858, 933, 1238
BshNI GGYRCC 1 cut(s) 908
BsiEI CGRYCG 1 cut(s) 229
BsiHKAI GWGCWC 4 cut(s) 267, 699, 870, 1270
BsiSI CCGG 1 cut(s) 235
BslI CCNNNNNNNGG 3 cut(s) 184, 854, 940
BsmAI GTCTC 3 cut(s) 236, 446, 813
BsmBI CGTCTC 1 cut(s) 236
BsnI GGCC 5 cut(s) 100, 547, 858, 933, 1238
Bsp120I GGGCCC 1 cut(s) 98
Bsp1286I GDGCHC 5 cut(s) 102, 267, 699, 870, 1270
Bsp143I GATC 6 cut(s) 40, 174, 614, 646, 781, 921
Bsp1720I GCTNAGC 1 cut(s) 130
BspACI CCGC 4 cut(s) 344, 707, 844, 1277
BspANI GGCC 5 cut(s) 100, 547, 858, 933, 1238
BspCNI CTCAG 5 cut(s) 448, 493, 841, 1160, 1225
BspFNI CGCG 1 cut(s) 344
BspHI TCATGA 1 cut(s) 37
BspLI GGNNCC 4 cut(s) 99, 100, 764, 910
BspMI ACCTGC 1 cut(s) 1303
BspPI GGATC 5 cut(s) 35, 169, 622, 654, 789
BspT107I GGYRCC 1 cut(s) 908
BsrI ACTGG 4 cut(s) 493, 723, 886, 934
BssECI CCNNGG 1 cut(s) 1100
BssMI GATC 6 cut(s) 40, 174, 614, 646, 781, 921
Bst4CI ACNGT 2 cut(s) 230, 382
Bst6I CTCTTC 1 cut(s) 991
BstAPI GCANNNNNTGC 2 cut(s) 140, 703
BstC8I GCNNGC 3 cut(s) 366, 667, 805
BstDEI CTNAG 7 cut(s) 130, 456, 501, 849, 918, 1147, 1233
BstEII GGTNACC 1 cut(s) 326
BstF5I GGATG 1 cut(s) 1127
BstFNI CGCG 1 cut(s) 344
BstHHI GCGC 2 cut(s) 84, 774
BstKTI GATC 6 cut(s) 43, 177, 617, 649, 784, 924
BstMAI GTCTC 3 cut(s) 236, 446, 813
BstMBI GATC 6 cut(s) 40, 174, 614, 646, 781, 921
BstMCI CGRYCG 1 cut(s) 229
BstMWI GCNNNNNNNGC 8 cut(s) 59, 140, 703, 760, 769, 882, 967, 1105
BstNSI RCATGY 1 cut(s) 1078
BstPI GGTNACC 1 cut(s) 326
BstSFI CTRYAG 2 cut(s) 72, 1036
BstSLI GKGCMC 3 cut(s) 102, 699, 1270
BstUI CGCG 1 cut(s) 344
BstV1I GCAGC 5 cut(s) 62, 127, 223, 325, 1285
BstX2I RGATCY 2 cut(s) 614, 646
BstYI RGATCY 2 cut(s) 614, 646
BsuRI GGCC 5 cut(s) 100, 547, 858, 933, 1238
BtsCI GGATG 1 cut(s) 1127
BtsI GCAGTG 2 cut(s) 822, 1268
BtsIMutI CAGTG 5 cut(s) 387, 486, 822, 1155, 1268
BveI ACCTGC 1 cut(s) 1303
Cac8I GCNNGC 3 cut(s) 366, 667, 805
CaiI CAGNNNCTG 1 cut(s) 140
CciI TCATGA 1 cut(s) 37
CfoI GCGC 2 cut(s) 84, 774
Cfr13I GGNCC 5 cut(s) 98, 99, 119, 545, 857
Csp6I GTAC 2 cut(s) 512, 1144
CviQI GTAC 2 cut(s) 512, 1144
DdeI CTNAG 7 cut(s) 130, 456, 501, 849, 918, 1147, 1233
DpnI GATC 6 cut(s) 42, 176, 616, 648, 783, 923
DpnII GATC 6 cut(s) 40, 174, 614, 646, 781, 921
DraIII CACNNNGTG 1 cut(s) 1166
EaeI YGGCCR 1 cut(s) 931
Eam1104I CTCTTC 1 cut(s) 991
EarI CTCTTC 1 cut(s) 991
Ecl136II GAGCTC 2 cut(s) 265, 868
Eco24I GRGCYC 3 cut(s) 102, 267, 870
Eco47I GGWCC 1 cut(s) 119
Eco53kI GAGCTC 2 cut(s) 265, 868
Eco57I CTGAAG 1 cut(s) 270
Eco91I GGTNACC 1 cut(s) 326
EcoICRI GAGCTC 2 cut(s) 265, 868
EcoO109I RGGNCCY 1 cut(s) 98
EcoO65I GGTNACC 1 cut(s) 326
EcoT38I GRGCYC 3 cut(s) 102, 267, 870
Esp3I CGTCTC 1 cut(s) 236
FauNDI CATATG 1 cut(s) 86
Fnu4HI GCNGC 6 cut(s) 51, 141, 212, 314, 707, 1299
FokI GGATG 1 cut(s) 1134
FriOI GRGCYC 3 cut(s) 102, 267, 870
Fsp4HI GCNGC 6 cut(s) 51, 141, 212, 314, 707, 1299
FspBI CTAG 3 cut(s) 561, 677, 1071
GlaI GCGC 2 cut(s) 83, 773
GluI GCNGC 6 cut(s) 51, 141, 212, 314, 707, 1299
GsaI CCCAGC 1 cut(s) 1178
HaeIII GGCC 5 cut(s) 100, 547, 858, 933, 1238
HapII CCGG 1 cut(s) 235
HhaI GCGC 2 cut(s) 84, 774
Hin6I GCGC 2 cut(s) 82, 772
HinP1I GCGC 2 cut(s) 82, 772
HindIII AAGCTT 1 cut(s) 169
HinfI GANTC 2 cut(s) 689, 837
HpaII CCGG 1 cut(s) 235
HphI GGTGA 4 cut(s) 397, 503, 541, 590
Hpy166II GTNNAC 4 cut(s) 556, 697, 1158, 1268
Hpy188I TCNGA 6 cut(s) 12, 113, 289, 818, 1084, 1104
Hpy188III TCNNGA 6 cut(s) 38, 217, 863, 871, 1114, 1187
Hpy8I GTNNAC 4 cut(s) 556, 697, 1158, 1268
Hpy99I CGWCG 1 cut(s) 113
HpyAV CCTTC 7 cut(s) 17, 132, 294, 518, 592, 681, 1057
HpyCH4III ACNGT 2 cut(s) 230, 382
HpyCH4IV ACGT 1 cut(s) 1165
HpyF10VI GCNNNNNNNGC 8 cut(s) 59, 140, 703, 760, 769, 882, 967, 1105
HpyF3I CTNAG 7 cut(s) 130, 456, 501, 849, 918, 1147, 1233
HpySE526I ACGT 1 cut(s) 1165
HspAI GCGC 2 cut(s) 82, 772
Kzo9I GATC 6 cut(s) 40, 174, 614, 646, 781, 921
LmnI GCTCC 2 cut(s) 113, 768
Lsp1109I GCAGC 5 cut(s) 62, 127, 223, 325, 1285
LweI GCATC 4 cut(s) 979, 1003, 1180, 1190
MaeI CTAG 3 cut(s) 561, 677, 1071
MaeII ACGT 1 cut(s) 1165
MaeIII GTNAC 1 cut(s) 326
MalI GATC 6 cut(s) 42, 176, 616, 648, 783, 923
MboI GATC 6 cut(s) 40, 174, 614, 646, 781, 921
MboII GAAGA 1 cut(s) 1008
MflI RGATCY 2 cut(s) 614, 646
MhlI GDGCHC 5 cut(s) 102, 267, 699, 870, 1270
MlsI TGGCCA 1 cut(s) 933
MluNI TGGCCA 1 cut(s) 933
MmeI TCCRAC 2 cut(s) 91, 592
MnlI CCTC 7 cut(s) 442, 496, 628, 870, 1110, 1201, 1228
Mox20I TGGCCA 1 cut(s) 933
MroXI GAANNNNTTC 1 cut(s) 1109
MscI TGGCCA 1 cut(s) 933
MseI TTAA 4 cut(s) 150, 426, 1308, 1312
MslI CAYNNNNRTG 1 cut(s) 272
Msp20I TGGCCA 1 cut(s) 933
MspI CCGG 1 cut(s) 235
MvnI CGCG 1 cut(s) 344
MwoI GCNNNNNNNGC 8 cut(s) 59, 140, 703, 760, 769, 882, 967, 1105
NdeI CATATG 1 cut(s) 86
NdeII GATC 6 cut(s) 40, 174, 614, 646, 781, 921
NlaIV GGNNCC 4 cut(s) 99, 100, 764, 910
NspI RCATGY 1 cut(s) 1078
PacI TTAATTAA 1 cut(s) 1312
PagI TCATGA 1 cut(s) 37
PdmI GAANNNNTTC 1 cut(s) 1109
PfeI GAWTC 2 cut(s) 689, 837
PkrI GCNGC 6 cut(s) 52, 142, 213, 315, 708, 1300
PshBI ATTAAT 1 cut(s) 1308
Psp124BI GAGCTC 2 cut(s) 267, 870
PspEI GGTNACC 1 cut(s) 326
PspFI CCCAGC 1 cut(s) 1174
PspN4I GGNNCC 4 cut(s) 99, 100, 764, 910
PspOMI GGGCCC 1 cut(s) 98
PspPI GGNCC 5 cut(s) 98, 99, 119, 545, 857
PstNI CAGNNNCTG 1 cut(s) 140
PsuI RGATCY 2 cut(s) 614, 646
RsaI GTAC 2 cut(s) 513, 1145
RsaNI GTAC 2 cut(s) 512, 1144
RseI CAYNNNNRTG 1 cut(s) 272
SacI GAGCTC 2 cut(s) 267, 870
SaqAI TTAA 4 cut(s) 150, 426, 1308, 1312
SatI GCNGC 6 cut(s) 51, 141, 212, 314, 707, 1299
Sau3AI GATC 6 cut(s) 40, 174, 614, 646, 781, 921
Sau96I GGNCC 5 cut(s) 98, 99, 119, 545, 857
SduI GDGCHC 5 cut(s) 102, 267, 699, 870, 1270
SfaNI GCATC 4 cut(s) 979, 1003, 1180, 1190
SfcI CTRYAG 2 cut(s) 72, 1036
SinI GGWCC 1 cut(s) 119
SmiMI CAYNNNNRTG 1 cut(s) 272
SmlI CTYRAG 4 cut(s) 215, 755, 863, 869
SmoI CTYRAG 4 cut(s) 215, 755, 863, 869
SsiI CCGC 4 cut(s) 344, 707, 844, 1277
SspMI CTAG 3 cut(s) 561, 677, 1071
SstI GAGCTC 2 cut(s) 267, 870
TaaI ACNGT 2 cut(s) 230, 382
TaiI ACGT 1 cut(s) 1168
TaqI TCGA 1 cut(s) 1011
TatI WGTACW 1 cut(s) 1143
TauI GCSGC 1 cut(s) 709
TfiI GAWTC 2 cut(s) 689, 837
Tru1I TTAA 4 cut(s) 150, 426, 1308, 1312
Tru9I TTAA 4 cut(s) 150, 426, 1308, 1312
TscAI CASTG 5 cut(s) 387, 493, 829, 1155, 1275
TseI GCWGC 5 cut(s) 50, 140, 211, 313, 1298
TspDTI ATGAA 4 cut(s) 26, 230, 799, 1237
TspGWI ACGGA 1 cut(s) 1134
TspRI CASTG 5 cut(s) 387, 493, 829, 1155, 1275
VneI GTGCAC 2 cut(s) 695, 1266
VpaK11BI GGWCC 1 cut(s) 119
VspI ATTAAT 1 cut(s) 1308
XapI RAATTY 3 cut(s) 254, 349, 1006
XceI RCATGY 1 cut(s) 1078
XcmI CCANNNNNNNNNTGG 2 cut(s) 775, 1246
XmnI GAANNNNTTC 1 cut(s) 1109
XspI CTAG 3 cut(s) 561, 677, 1071
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.