Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr15

Orthogroup ID

OG0011869

Physical Location & Seq

Genomic Coordinates Forward (+)

15658088 .. 15660866

Gene Structure 2779 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD15G1197200.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1599 bp

ATGTGTAATCCAAACCCTTCATCCACAGCCACGAAAACAGAGCATCATCACCATCAGCCGCCGCAGCCCCACTTTTTCCTAGACTTCTTATCCTTACCAGAAGCTCCAAAGCCGCCTCCGCTGCCACATTTCACAAGTTCACTTGCTGTTTCGGACATAGTCGCCGAGACCAAGTCTCTGTTTCAGCTGGCCTTCCCAATCCTCCTCACCGCCCTCATTCTCTACTCCCGCTCAGTCGTCTCGATGCTCTTCCTTGGCCACCTCGGCGACCTCGAGCTCGCCGCTGGATCCCTCGCCATCGCATTCGCTAACATCACCGGCTACTCCGTCCTCTCCGGACTAGCCCTGGGCATGGAACCTCTCTGTTCCCAAGCCTTCGGTGCCCAACGTCCGAAGCTCCTCTCTTTGACCCTCCACCGCTCCGTCATCTTCCTCACCCTCGCATCGCTGCCCATTTCGCTCCTCTGGGTCAGCATGTCAGTAATCCTCTTGTACCTCCGCCAGGACCCAGATATCACCGCCGTGGCCCACACCTATCTCATCTTCTCCCTCCCTGACCTCTTCACAAACTCCCTCATTCACCCAATCCGCATATACCTTCGCGCGCAGGGAATCACCCACCCGCTCACGTTAGCATCCCTCGCCGGCGCGCTCTTCCACCTCCCGATGAACCTCCTGTTAGTCACTCGGCTCCAGCTCGGCGTGGCCGGAGTCGCGGCGGCTTCCGCCGCTTCCAATCTATTTGTTTTACTGGCCCTCGTGTCGTACGTGTGGGCCACAGGGATCCACGAGCCAACATGGACGAAGCCGAGCCGCGAGTGCCTGACAGGTTGGAAGCCACTGCTTCGGCTCGCCGCACCGAGCTGCGTTTCCGTGTGCTTGGAGTGGTGGTGGTATGAGATCATGATCGTCCTGTGTGGGCTCCTCGTGGACCCCAGAGCAACCGTCGCCTCGATGGGCGTGCTCATCCAAACGACGTCGCTGATATACGCGTTCCCGTCCTCCTTGAGCTTCGCGGTCTCGACGCGGGTCGGGAACGAGCTCGGGGCTAACCGGCCGCACAAGGCAAAGTTATCCTCTGCGGTGGCGGTCATGATTGCGTTCTTGATGGGCCTATCCGCGACGAGTTTCGCGTCTGGGATGCGGGGGAGCTGGGCTCGGATGTTCACCAGCGACGCGGAGATCGTGCGGCTGACGTCGGCGGCGCTGCCGATCCTAGGCCTGTGCGAACTTGGCAACTGCCCGCAGACAGTGGGTTGTGGGGTCCTCAGAGGCAGCGCACGTCCGTCCACCGCGGCTAACGTGAACCTCAGCGCATTCTATCTCGTGGGCATGCCCGTGGCTGTGGGACTCGGGTTCTGGGTAGGAATCGGGTTTTGTGGATTATGGATCGGGTTGCTGTCAGCCCAGGTTTGTTGTGCTGGGCTGATGTTGTATGTGGTTGGGACCACAGACTGGGATCTTCAAGCTAAGAGGGCCCAGTCGCTAACGTGCGCCGGGAGTGAAATCACAGTACCTGATTGTAAGGTTGTTGAGGAACAGCAGCCGTTGATTATTATTACGGTGCCTTCTTCTCGAGACAAGGGAGTAGTACAGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005215 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005768 GO:0005770 GO:0006810 GO:0006855 GO:0007275 GO:0007568 GO:0008150 GO:0009653 GO:0010008 GO:0010015 GO:0010150 GO:0010252 GO:0012505 GO:0015238 GO:0015893 GO:0016020 GO:0022622 GO:0022857 GO:0031090 GO:0031347 GO:0031348 GO:0031410 GO:0031982 GO:0032501 GO:0032502 GO:0040008 GO:0042221 GO:0042493 GO:0042592 GO:0043226 GO:0043227 GO:0043229 GO:0044422 GO:0044424 GO:0044433 GO:0044440 GO:0044444 GO:0044446 GO:0044464 GO:0046620 GO:0048364 GO:0048366 GO:0048367 GO:0048519 GO:0048583 GO:0048585 GO:0048638 GO:0048731 GO:0048827 GO:0048856 GO:0048878 GO:0050789 GO:0050793 GO:0050801 GO:0050896 GO:0051179 GO:0051234 GO:0051239 GO:0055065 GO:0055072 GO:0055076 GO:0055080 GO:0055085 GO:0065007 GO:0065008 GO:0080134 GO:0090693 GO:0097708 GO:0098588 GO:0098771 GO:0098805 GO:0099402 GO:1905392

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

MatE

Protein Analysis

533

Amino Acids

56.96

Weight (kDa)

8.18

Isoelectric Point (pI)

34.3

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
MatE	PF01554	66 - 225	7.4e-34	MatE
MatE	PF01554	287 - 448	6.2e-34	MatE

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0011869)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G29140
fragaria_vesca	FvH4_1g06290 FvH4_3g02790 FvH4_3g02831
malus_domestica	MD02G1066700.v1.1 MD15G1197200.v1.1
prunus_persica	Prupe.7G218600_v2.0.a1
pyrus_communis	pycom02g05280 pycom15g17620
rosa_chinensis	RchiOBHm_Chr2g0091991
rosa_laevigata	RLG00000016268
rosa_multiflora	Rmu_co8445145.1_g000001 Rmu_sc0000524.1_g000001
rosa_roxburghii	Rroxscaffold_2G00149550
rosa_rugosa	Rorug02G0022200
rosa_samantha	Rh2AG067900 Rh2BG067200 Rh2CG068500
rosa_wichuraiana	Rw2G005320

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	2 cut(s)	980, 1199
AccB1I	GGYRCC	2 cut(s)	380, 1564
AccB7I	CCANNNNNTGG	1 cut(s)	1455
AccBSI	CCGCTC	3 cut(s)	231, 420, 625
AccIII	TCCGGA	1 cut(s)	335
AclWI	GGATC	7 cut(s)	282, 295, 778, 791, 1207, 1397, 1467
AcoI	YGGCCR	3 cut(s)	256, 705, 1055
AcyI	GRCGYC	2 cut(s)	977, 1196
AfaI	GTAC	4 cut(s)	494, 767, 1515, 1593
AfiI	CCNNNNNNNGG	4 cut(s)	352, 502, 1217, 1455
AflIII	ACRYGT	2 cut(s)	768, 990
AgsI	TTSAA	1 cut(s)	1466
AjiI	CACGTC	1 cut(s)	1283
AjnI	CCWGG	3 cut(s)	345, 501, 1407
AleI	CACNNNNGTG	1 cut(s)	521
Alw21I	GWGCWC	3 cut(s)	279, 966, 1044
Alw26I	GTCTC	5 cut(s)	161, 180, 244, 1024, 1572
AlwI	GGATC	7 cut(s)	282, 295, 778, 791, 1207, 1397, 1467
AlwNI	CAGNNNCTG	1 cut(s)	1517
Ama87I	CYCGRG	4 cut(s)	272, 1043, 1352, 1575
Aor13HI	TCCGGA	1 cut(s)	335
ApaI	GGGCCC	1 cut(s)	1480
ApeKI	GCWGC	7 cut(s)	64, 121, 448, 864, 1207, 1275, 1543
AspA2I	CCTAGG	1 cut(s)	1216
AspLEI	GCGC	8 cut(s)	605, 607, 650, 652, 1207, 1280, 1316, 1496
AsuC2I	CCSGG	1 cut(s)	1498
AsuHPI	GGTGA	8 cut(s)	41, 199, 307, 427, 508, 572, 607, 1159
AvaI	CYCGRG	4 cut(s)	272, 1043, 1352, 1575
AvaII	GGWCC	4 cut(s)	505, 931, 1264, 1446
AvrII	CCTAGG	1 cut(s)	1216
BaeGI	GKGCMC	2 cut(s)	385, 1480
BalI	TGGCCA	1 cut(s)	258
BamHI	GGATCC	2 cut(s)	287, 783
BanI	GGYRCC	2 cut(s)	380, 1564
BanII	GRGCYC	5 cut(s)	279, 924, 1044, 1159, 1480
BauI	CACGAG	4 cut(s)	758, 788, 926, 1325
Bbv12I	GWGCWC	3 cut(s)	279, 966, 1044
BbvCI	CCTCAGC	1 cut(s)	1310
BbvI	GCAGC	7 cut(s)	76, 108, 435, 851, 1194, 1287, 1555
BccI	CCATC	4 cut(s)	60, 305, 949, 1102
BceAI	ACGGC	2 cut(s)	506, 1531
BcgI	CGANNNNNNTGC	2 cut(s)	943, 977
BciT130I	CCWGG	3 cut(s)	347, 503, 1409
BcnI	CCSGG	1 cut(s)	1498
BcoDI	GTCTC	5 cut(s)	161, 180, 244, 1024, 1572
BfaI	CTAG	3 cut(s)	80, 341, 1217
BfoI	RGCGCY	1 cut(s)	1208
BglI	GCCNNNNNGGC	1 cut(s)	264
BlnI	CCTAGG	1 cut(s)	1216
Bme1390I	CCNGG	4 cut(s)	347, 503, 1409, 1498
Bme18I	GGWCC	4 cut(s)	505, 931, 1264, 1446
BmeT110I	CYCGRG	4 cut(s)	272, 1043, 1352, 1575
BmgBI	CACGTC	1 cut(s)	1283
BmrFI	CCNGG	4 cut(s)	347, 503, 1409, 1498
BmrI	ACTGGG	2 cut(s)	1465, 1474
BmsI	GCATC	5 cut(s)	52, 234, 452, 644, 1131
BmuI	ACTGGG	2 cut(s)	1465, 1474
BoxI	GACNNNNGTC	1 cut(s)	1028
BplI	GAGNNNNNCTC	2 cut(s)	1141, 1173
BpmI	CTGGAG	1 cut(s)	677
Bpu10I	CCTNAGC	1 cut(s)	1310
BpuEI	CTTGAG	1 cut(s)	1027
BpuMI	CCSGG	1 cut(s)	1498
BsaAI	YACGTR	1 cut(s)	769
BsaBI	GATNNNNATC	1 cut(s)	905
BsaHI	GRCGYC	2 cut(s)	977, 1196
BsaI	GGTCTC	2 cut(s)	161, 1024
BsaJI	CCNNGG	9 cut(s)	253, 262, 345, 346, 522, 1216, 1293, 1338, 1407
BsaWI	WCCGGW	1 cut(s)	335
BsaXI	ACNNNNNCTCC	2 cut(s)	875, 905
Bsc4I	CCNNNNNNNGG	4 cut(s)	352, 502, 1217, 1455
Bse118I	RCCGGY	3 cut(s)	317, 644, 1053
Bse1I	ACTGG	3 cut(s)	756, 1460, 1480
Bse8I	GATNNNNATC	1 cut(s)	905
BseAI	TCCGGA	1 cut(s)	335
BseBI	CCWGG	3 cut(s)	347, 503, 1409
BseDI	CCNNGG	9 cut(s)	253, 262, 345, 346, 522, 1216, 1293, 1338, 1407
BseGI	GGATG	5 cut(s)	20, 635, 966, 1146, 1167
BseJI	GATNNNNATC	1 cut(s)	905
BseLI	CCNNNNNNNGG	4 cut(s)	352, 502, 1217, 1455
BseMII	CTCAG	3 cut(s)	246, 1282, 1324
BseNI	ACTGG	3 cut(s)	756, 1460, 1480
BsePI	GCGCGC	2 cut(s)	603, 648
BseRI	GAGGAG	4 cut(s)	194, 389, 452, 914
BseSI	GKGCMC	2 cut(s)	385, 1480
BseX3I	CGGCCG	1 cut(s)	1055
BseXI	GCAGC	7 cut(s)	76, 108, 435, 851, 1194, 1287, 1555
BseYI	CCCAGC	2 cut(s)	1152, 1421
Bsh1285I	CGRYCG	1 cut(s)	1058
BshNI	GGYRCC	2 cut(s)	380, 1564
BsiEI	CGRYCG	1 cut(s)	1058
BsiHKAI	GWGCWC	3 cut(s)	279, 966, 1044
BsiHKCI	CYCGRG	4 cut(s)	272, 1043, 1352, 1575
BsiSI	CCGG	6 cut(s)	318, 336, 645, 708, 1054, 1497
BsiWI	CGTACG	1 cut(s)	765
BslFI	GGGAC	2 cut(s)	1362, 1459
BslI	CCNNNNNNNGG	4 cut(s)	352, 502, 1217, 1455
BsmAI	GTCTC	5 cut(s)	161, 180, 244, 1024, 1572
BsmBI	CGTCTC	1 cut(s)	244
BsmFI	GGGAC	2 cut(s)	1362, 1459
BsmI	GAATGC	2 cut(s)	302, 1316
Bso31I	GGTCTC	2 cut(s)	161, 1024
BsoBI	CYCGRG	4 cut(s)	272, 1043, 1352, 1575
Bsp120I	GGGCCC	1 cut(s)	1476
Bsp1286I	GDGCHC	7 cut(s)	279, 385, 924, 966, 1044, 1159, 1480
Bsp13I	TCCGGA	1 cut(s)	335
Bsp143I	GATC	8 cut(s)	287, 783, 900, 906, 1182, 1212, 1389, 1459
BspCNI	CTCAG	3 cut(s)	245, 1281, 1323
BspEI	TCCGGA	1 cut(s)	335
BspHI	TCATGA	2 cut(s)	903, 1092
BspPI	GGATC	7 cut(s)	282, 295, 778, 791, 1207, 1397, 1467
BspQI	GCTCTTC	2 cut(s)	254, 659
BspT107I	GGYRCC	2 cut(s)	380, 1564
BspTNI	GGTCTC	2 cut(s)	161, 1024
BsrBI	CCGCTC	3 cut(s)	231, 420, 625
BsrFI	RCCGGY	3 cut(s)	317, 644, 1053
BsrI	ACTGG	3 cut(s)	756, 1460, 1480
BssAI	RCCGGY	3 cut(s)	317, 644, 1053
BssECI	CCNNGG	9 cut(s)	253, 262, 345, 346, 522, 1216, 1293, 1338, 1407
BssHII	GCGCGC	2 cut(s)	603, 648
BssMI	GATC	8 cut(s)	287, 783, 900, 906, 1182, 1212, 1389, 1459
BssNI	GRCGYC	2 cut(s)	977, 1196
BssSI	CACGAG	4 cut(s)	758, 788, 926, 1325
BssT1I	CCWWGG	2 cut(s)	253, 1216
Bst2BI	CACGAG	4 cut(s)	758, 788, 926, 1325
Bst2UI	CCWGG	3 cut(s)	347, 503, 1409
Bst4CI	ACNGT	5 cut(s)	946, 1252, 1513, 1564, 1596
Bst6I	CTCTTC	3 cut(s)	254, 566, 659
BstACI	GRCGYC	2 cut(s)	977, 1196
BstBAI	YACGTR	1 cut(s)	769
BstC8I	GCNNGC	9 cut(s)	189, 279, 605, 646, 650, 852, 962, 1244, 1334
BstDEI	CTNAG	4 cut(s)	232, 1268, 1310, 1470
BstDSI	CCRYGG	3 cut(s)	522, 1293, 1338
BstENI	CCTNNNNNAGG	1 cut(s)	500
BstF5I	GGATG	5 cut(s)	20, 635, 966, 1146, 1167
BstH2I	RGCGCY	1 cut(s)	1208
BstHHI	GCGC	8 cut(s)	605, 607, 650, 652, 1207, 1280, 1316, 1496
BstKTI	GATC	8 cut(s)	290, 786, 903, 909, 1185, 1215, 1392, 1462
BstMAI	GTCTC	5 cut(s)	161, 180, 244, 1024, 1572
BstMBI	GATC	8 cut(s)	287, 783, 900, 906, 1182, 1212, 1389, 1459
BstMCI	CGRYCG	1 cut(s)	1058
BstNI	CCWGG	3 cut(s)	347, 503, 1409
BstNSI	RCATGY	2 cut(s)	478, 1336
BstPAI	GACNNNNGTC	1 cut(s)	1028
BstSCI	CCNGG	4 cut(s)	345, 501, 1407, 1496
BstSLI	GKGCMC	2 cut(s)	385, 1480
BstV1I	GCAGC	7 cut(s)	76, 108, 435, 851, 1194, 1287, 1555
BstX2I	RGATCY	3 cut(s)	287, 783, 1459
BstYI	RGATCY	3 cut(s)	287, 783, 1459
BstZI	CGGCCG	1 cut(s)	1055
BtgI	CCRYGG	3 cut(s)	522, 1293, 1338
BtgZI	GCGATG	2 cut(s)	283, 429
BtrI	CACGTC	1 cut(s)	1283
BtsCI	GGATG	5 cut(s)	20, 635, 966, 1146, 1167
BtsI	GCAGTG	1 cut(s)	839
BtsIMutI	CAGTG	2 cut(s)	839, 1257
Cac8I	GCNNGC	9 cut(s)	189, 279, 605, 646, 650, 852, 962, 1244, 1334
CaiI	CAGNNNCTG	1 cut(s)	1517
CciI	TCATGA	2 cut(s)	903, 1092
CfoI	GCGC	8 cut(s)	605, 607, 650, 652, 1207, 1280, 1316, 1496
Cfr10I	RCCGGY	3 cut(s)	317, 644, 1053
Cfr42I	CCGCGG	1 cut(s)	1296
CseI	GACGC	3 cut(s)	1033, 1122, 1184
Csp6I	GTAC	4 cut(s)	493, 766, 1514, 1592
CviAII	CATG	6 cut(s)	352, 475, 798, 904, 1093, 1333
CviQI	GTAC	4 cut(s)	493, 766, 1514, 1592
DdeI	CTNAG	4 cut(s)	232, 1268, 1310, 1470
DpnI	GATC	8 cut(s)	289, 785, 902, 908, 1184, 1214, 1391, 1461
DpnII	GATC	8 cut(s)	287, 783, 900, 906, 1182, 1212, 1389, 1459
EaeI	YGGCCR	3 cut(s)	256, 705, 1055
EagI	CGGCCG	1 cut(s)	1055
Eam1104I	CTCTTC	3 cut(s)	254, 566, 659
EarI	CTCTTC	3 cut(s)	254, 566, 659
EciI	GGCGGA	2 cut(s)	488, 715
Ecl136II	GAGCTC	2 cut(s)	277, 1042
EclXI	CGGCCG	1 cut(s)	1055
Eco130I	CCWWGG	2 cut(s)	253, 1216
Eco147I	AGGCCT	1 cut(s)	1221
Eco24I	GRGCYC	5 cut(s)	279, 924, 1044, 1159, 1480
Eco31I	GGTCTC	2 cut(s)	161, 1024
Eco32I	GATATC	1 cut(s)	514
Eco47I	GGWCC	4 cut(s)	505, 931, 1264, 1446
Eco52I	CGGCCG	1 cut(s)	1055
Eco53kI	GAGCTC	2 cut(s)	277, 1042
Eco88I	CYCGRG	4 cut(s)	272, 1043, 1352, 1575
EcoICRI	GAGCTC	2 cut(s)	277, 1042
EcoNI	CCTNNNNNAGG	1 cut(s)	500
EcoO109I	RGGNCCY	3 cut(s)	505, 1264, 1476
EcoRII	CCWGG	3 cut(s)	345, 501, 1407
EcoRV	GATATC	1 cut(s)	514
EcoT14I	CCWWGG	2 cut(s)	253, 1216
EcoT38I	GRGCYC	5 cut(s)	279, 924, 1044, 1159, 1480
ErhI	CCWWGG	2 cut(s)	253, 1216
Esp3I	CGTCTC	1 cut(s)	244
FaeI	CATG	6 cut(s)	355, 478, 801, 907, 1096, 1336
FaqI	GGGAC	2 cut(s)	1362, 1459
FatI	CATG	6 cut(s)	351, 474, 797, 903, 1092, 1332
FauI	CCCGC	5 cut(s)	236, 630, 1020, 1137, 1251
FokI	GGATG	5 cut(s)	7, 622, 953, 1153, 1174
FriOI	GRGCYC	5 cut(s)	279, 924, 1044, 1159, 1480
FspBI	CTAG	3 cut(s)	80, 341, 1217
GlaI	GCGC	8 cut(s)	604, 606, 649, 651, 1206, 1279, 1315, 1495
GsaI	CCCAGC	2 cut(s)	1156, 1425
GsuI	CTGGAG	1 cut(s)	677
HaeII	RGCGCY	1 cut(s)	1208
HapII	CCGG	6 cut(s)	318, 336, 645, 708, 1054, 1497
HgaI	GACGC	3 cut(s)	1033, 1122, 1184
HhaI	GCGC	8 cut(s)	605, 607, 650, 652, 1207, 1280, 1316, 1496
Hin1I	GRCGYC	2 cut(s)	977, 1196
Hin1II	CATG	6 cut(s)	355, 478, 801, 907, 1096, 1336
Hin6I	GCGC	8 cut(s)	603, 605, 648, 650, 1205, 1278, 1314, 1494
HinP1I	GCGC	8 cut(s)	603, 605, 648, 650, 1205, 1278, 1314, 1494
HinfI	GANTC	4 cut(s)	612, 711, 1350, 1368
HpaII	CCGG	6 cut(s)	318, 336, 645, 708, 1054, 1497
HphI	GGTGA	8 cut(s)	41, 199, 307, 427, 508, 572, 607, 1159
Hpy166II	GTNNAC	5 cut(s)	140, 931, 1167, 1290, 1306
Hpy188I	TCNGA	4 cut(s)	154, 393, 1161, 1271
Hpy8I	GTNNAC	5 cut(s)	140, 931, 1167, 1290, 1306
Hpy99I	CGWCG	7 cut(s)	950, 979, 982, 1027, 1126, 1178, 1201
HpyAV	CCTTC	5 cut(s)	27, 202, 385, 608, 1578
HpyCH4III	ACNGT	5 cut(s)	946, 1252, 1513, 1564, 1596
HpyCH4IV	ACGT	8 cut(s)	388, 629, 768, 977, 1196, 1282, 1302, 1490
HpyF3I	CTNAG	4 cut(s)	232, 1268, 1310, 1470
HpySE526I	ACGT	8 cut(s)	388, 629, 768, 977, 1196, 1282, 1302, 1490
Hsp92I	GRCGYC	2 cut(s)	977, 1196
Hsp92II	CATG	6 cut(s)	355, 478, 801, 907, 1096, 1336
HspAI	GCGC	8 cut(s)	603, 605, 648, 650, 1205, 1278, 1314, 1494
Kpn2I	TCCGGA	1 cut(s)	335
KroI	GCCGGC	1 cut(s)	644
KroNI	GCCGGC	1 cut(s)	646
KspI	CCGCGG	1 cut(s)	1296
Kzo9I	GATC	8 cut(s)	287, 783, 900, 906, 1182, 1212, 1389, 1459
LguI	GCTCTTC	2 cut(s)	254, 659
LmnI	GCTCC	7 cut(s)	109, 402, 425, 465, 696, 927, 1149
Lsp1109I	GCAGC	7 cut(s)	76, 108, 435, 851, 1194, 1287, 1555
LweI	GCATC	5 cut(s)	52, 234, 452, 644, 1131
MaeI	CTAG	3 cut(s)	80, 341, 1217
MaeII	ACGT	8 cut(s)	388, 629, 768, 977, 1196, 1282, 1302, 1490
MaeIII	GTNAC	1 cut(s)	682
MalI	GATC	8 cut(s)	289, 785, 902, 908, 1184, 1214, 1391, 1461
MbiI	CCGCTC	3 cut(s)	231, 420, 625
MboI	GATC	8 cut(s)	287, 783, 900, 906, 1182, 1212, 1389, 1459
MboII	GAAGA	7 cut(s)	241, 421, 535, 553, 646, 1454, 1563
MflI	RGATCY	3 cut(s)	287, 783, 1459
MhlI	GDGCHC	7 cut(s)	279, 385, 924, 966, 1044, 1159, 1480
MlsI	TGGCCA	1 cut(s)	258
MluI	ACGCGT	1 cut(s)	990
MluNI	TGGCCA	1 cut(s)	258
MlyI	GAGTC	2 cut(s)	720, 1344
MmeI	TCCRAC	1 cut(s)	812
Mox20I	TGGCCA	1 cut(s)	258
MreI	CGCCGGCG	1 cut(s)	644
MroI	TCCGGA	1 cut(s)	335
MroNI	GCCGGC	1 cut(s)	644
MscI	TGGCCA	1 cut(s)	258
MslI	CAYNNNNRTG	2 cut(s)	521, 1337
Msp20I	TGGCCA	1 cut(s)	258
MspA1I	CMGCKG	4 cut(s)	121, 187, 284, 1295
MspI	CCGG	6 cut(s)	318, 336, 645, 708, 1054, 1497
MspR9I	CCNGG	4 cut(s)	347, 503, 1409, 1498
Mva1269I	GAATGC	2 cut(s)	302, 1316
MvaI	CCWGG	3 cut(s)	347, 503, 1409
NaeI	GCCGGC	1 cut(s)	646
NciI	CCSGG	1 cut(s)	1498
NdeII	GATC	8 cut(s)	287, 783, 900, 906, 1182, 1212, 1389, 1459
NgoMIV	GCCGGC	1 cut(s)	644
NlaIII	CATG	6 cut(s)	355, 478, 801, 907, 1096, 1336
NmeAIII	GCCGAG	5 cut(s)	190, 243, 667, 678, 834
NmuCI	GTSAC	1 cut(s)	682
NspI	RCATGY	2 cut(s)	478, 1336
OliI	CACNNNNGTG	1 cut(s)	521
PaeI	GCATGC	1 cut(s)	1336
PaeR7I	CTCGAG	2 cut(s)	272, 1575
PagI	TCATGA	2 cut(s)	903, 1092
PasI	CCCWGGG	1 cut(s)	346
PauI	GCGCGC	2 cut(s)	603, 648
PceI	AGGCCT	1 cut(s)	1221
PciSI	GCTCTTC	2 cut(s)	254, 659
PcsI	WCGNNNNNNNCGW	4 cut(s)	270, 765, 1130, 1182
PctI	GAATGC	2 cut(s)	302, 1316
PdiI	GCCGGC	1 cut(s)	646
PfeI	GAWTC	2 cut(s)	612, 1368
Pfl23II	CGTACG	1 cut(s)	765
PflFI	GACNNNGTC	2 cut(s)	158, 172
PflMI	CCANNNNNTGG	1 cut(s)	1455
PleI	GAGTC	2 cut(s)	719, 1344
PpsI	GAGTC	2 cut(s)	719, 1344
Ppu21I	YACGTR	1 cut(s)	769
PpuMI	RGGWCCY	2 cut(s)	505, 1264
PshAI	GACNNNNGTC	1 cut(s)	1028
Psp124BI	GAGCTC	2 cut(s)	279, 1044
Psp5II	RGGWCCY	2 cut(s)	505, 1264
Psp6I	CCWGG	3 cut(s)	345, 501, 1407
PspFI	CCCAGC	2 cut(s)	1152, 1421
PspGI	CCWGG	3 cut(s)	345, 501, 1407
PspLI	CGTACG	1 cut(s)	765
PspOMI	GGGCCC	1 cut(s)	1476
PspPPI	RGGWCCY	2 cut(s)	505, 1264
PspXI	VCTCGAGB	1 cut(s)	272
PstNI	CAGNNNCTG	1 cut(s)	1517
PsuI	RGATCY	3 cut(s)	287, 783, 1459
PsyI	GACNNNGTC	2 cut(s)	158, 172
PteI	GCGCGC	2 cut(s)	603, 648
PvuII	CAGCTG	1 cut(s)	187
RsaI	GTAC	4 cut(s)	494, 767, 1515, 1593
RsaNI	GTAC	4 cut(s)	493, 766, 1514, 1592
RseI	CAYNNNNRTG	2 cut(s)	521, 1337
SacI	GAGCTC	2 cut(s)	279, 1044
SacII	CCGCGG	1 cut(s)	1296
SapI	GCTCTTC	2 cut(s)	254, 659
Sau3AI	GATC	8 cut(s)	287, 783, 900, 906, 1182, 1212, 1389, 1459
SchI	GAGTC	2 cut(s)	720, 1344
ScrFI	CCNGG	4 cut(s)	347, 503, 1409, 1498
SduI	GDGCHC	7 cut(s)	279, 385, 924, 966, 1044, 1159, 1480
SfaNI	GCATC	5 cut(s)	52, 234, 452, 644, 1131
Sfr274I	CTCGAG	2 cut(s)	272, 1575
Sfr303I	CCGCGG	1 cut(s)	1296
SgrAI	CRCCGGYG	1 cut(s)	644
SgrBI	CCGCGG	1 cut(s)	1296
SinI	GGWCC	4 cut(s)	505, 931, 1264, 1446
SlaI	CTCGAG	2 cut(s)	272, 1575
SmiMI	CAYNNNNRTG	2 cut(s)	521, 1337
SmlI	CTYRAG	3 cut(s)	272, 1006, 1575
SmoI	CTYRAG	3 cut(s)	272, 1006, 1575
SphI	GCATGC	1 cut(s)	1336
SseBI	AGGCCT	1 cut(s)	1221
SspMI	CTAG	3 cut(s)	80, 341, 1217
SstI	GAGCTC	2 cut(s)	279, 1044
StuI	AGGCCT	1 cut(s)	1221
StyD4I	CCNGG	4 cut(s)	345, 501, 1407, 1496
StyI	CCWWGG	2 cut(s)	253, 1216
TaaI	ACNGT	5 cut(s)	946, 1252, 1513, 1564, 1596
TaiI	ACGT	8 cut(s)	391, 632, 771, 980, 1199, 1285, 1305, 1493
TaqI	TCGA	5 cut(s)	242, 273, 953, 1022, 1576
TatI	WGTACW	1 cut(s)	1591
TfiI	GAWTC	2 cut(s)	612, 1368
TscAI	CASTG	2 cut(s)	846, 1257
TseFI	GTSAC	1 cut(s)	682
TseI	GCWGC	7 cut(s)	64, 121, 448, 864, 1207, 1275, 1543
Tsp45I	GTSAC	1 cut(s)	682
TspDTI	ATGAA	2 cut(s)	9, 683
TspGWI	ACGGA	4 cut(s)	316, 412, 862, 1275
TspRI	CASTG	2 cut(s)	846, 1257
Tth111I	GACNNNGTC	2 cut(s)	158, 172
Van91I	CCANNNNNTGG	1 cut(s)	1455
VpaK11BI	GGWCC	4 cut(s)	505, 931, 1264, 1446
XagI	CCTNNNNNAGG	1 cut(s)	500
XceI	RCATGY	2 cut(s)	478, 1336
XhoI	CTCGAG	2 cut(s)	272, 1575
XmaJI	CCTAGG	1 cut(s)	1216
XspI	CTAG	3 cut(s)	80, 341, 1217
ZraI	GACGTC	2 cut(s)	978, 1197

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.