Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000002

Orthogroup ID

OG0011869

Physical Location & Seq

Genomic Coordinates Reverse (-)

87107569 .. 87109223

Gene Structure 1655 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_2G00149550.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1509 bp

ATGTGTAATCCAAACCCTTCTGTTAATTCCACCAAGACCCAGAAAGCAGCGGAGCAGGTTCATCAACAGCCACAAGCCCATCTCTTTCTCGACCTCTTGTTCTTGTCAGAGGAGCCGCCAAAGCTAGTAGTAAAGCAACTACAACAGCCAGCATCGACAATAAGCAGCAGCAGCCCCCCAATTTCCATCACAGACGTAGTCAAAGAGACCAAGTCCCTGTTCAAACTGGCCTTCCCCATACTCATCACAGCTCTCATTCTCTACTCCCGCTCAGCCCTCTCCATGCTCTTCCTGGGCCGCCTGGGCGATTTAGAACTCGCCTCGGGGTCACTAGCCATAGCTTTTGCCAACATCACAGGCTACTCCGTACTCTCCGGCCTAGCCCTGGGCATGGAGCCGCTCTGTTCCCAAGCCTTCGGAGCACAACGTCCGAAGCTTCTCTCAGTCACTCTCCACCGCGCTGTAATCTTCCTCGTAGTCTGTTCCCTCCCCATTTCGCTGCTGTGGTACAATATCTCGACCATTCTTTTGTATCTTCGCCAGGACCCCAATATCACTAACATGGCTCACACCTATCTCATGCTCCGCCTCGGCGTCGCCGGGGTCGCCGCCGCCTCCGCCGCGTCCAACTTTTTCGTGCTGGCCTGCCTAGTTGCATACGTCTGGGCGACCAGGCTGCACGTGCCCACGTGGACTGCGCCGAGCCGGGAGTGCTTGACCGGCTGGAAGCCGCTGCTCCGGCTGGCCGCGCCGAGCTGCGTGTCCGTTTGCTTGGAATGGTGGTGGTACGAGATCATGATCGTCTTGTGTGGCCTCCTGGTGGACCCCAAAGCAACCGTCGCCTCGATGGGAGTGCTTATCCAAACGACGTCGTTGATCTACGTGTTCCCGTCGTCTCTCGGGTTCGCCGTGTCCACCCGGGTCGGCAACGAGCTCGGGGCGAACCGCCCCAACCGGGCCAGGCTATCCGCTGTGGTCGCCATTCTCCTGGCCTTCCTCATGGGCCTATCCGCCACGACCTTCGCGTCCGGGATGAGATCAGGGCTGTGGGGCCGGATGTTCACCCACGACGCCGAGATCATACGGCTGACGTCGGCCGCGCTTCCAATCCTAGGCCTGTGCGAGCTCGGCAACTGCCCGCAGACGGTCGCGTGTGGTGTACTCAGGGGAAGCGCGCGTCCGACTACCGCAGCGAACGTCAACCTCAGCGCGTTCTATCTGGTGGGGATGCCCGTGGCCGTTGGGCTCGGGTTCTGGGTCGGAGTCGGGTTCAATGGACTCTGGATCGGGTTGCTGTCGGCCCAGATTTGTTGTGCCGGGCTGATGTTGTATGTTGTTGGGACCACGGACTGGGATTTCCAGGCCAAGAGGGCCCAGGGGCTATCGTGCGCCGGGTGCGATGTGATACTACCTCCTCCTCCTCCTCCTCCTCCAACTAGTAGCGATTCCAAAGGTGAAGAAGAGGAGCCATTGATTATCATTACAGTGCCTTCTTCTTCTTCCCGATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005215 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005768 GO:0005770 GO:0006810 GO:0006855 GO:0007275 GO:0007568 GO:0008150 GO:0009653 GO:0010008 GO:0010015 GO:0010150 GO:0010252 GO:0012505 GO:0015238 GO:0015893 GO:0016020 GO:0022622 GO:0022857 GO:0031090 GO:0031347 GO:0031348 GO:0031410 GO:0031982 GO:0032501 GO:0032502 GO:0040008 GO:0042221 GO:0042493 GO:0042592 GO:0043226 GO:0043227 GO:0043229 GO:0044422 GO:0044424 GO:0044433 GO:0044440 GO:0044444 GO:0044446 GO:0044464 GO:0046620 GO:0048364 GO:0048366 GO:0048367 GO:0048519 GO:0048583 GO:0048585 GO:0048638 GO:0048731 GO:0048827 GO:0048856 GO:0048878 GO:0050789 GO:0050793 GO:0050801 GO:0050896 GO:0051179 GO:0051234 GO:0051239 GO:0055065 GO:0055072 GO:0055076 GO:0055080 GO:0055085 GO:0065007 GO:0065008 GO:0080134 GO:0090693 GO:0097708 GO:0098588 GO:0098771 GO:0098805 GO:0099402 GO:1905392

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

MatE

Protein Analysis

502

Amino Acids

53.68

Weight (kDa)

8.59

Isoelectric Point (pI)

45.84

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
MatE	PF01554	79 - 197	2.9e-24	MatE
MatE	PF01554	251 - 413	1.2e-33	MatE

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0011869)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G29140
fragaria_vesca	FvH4_1g06290 FvH4_3g02790 FvH4_3g02831
malus_domestica	MD02G1066700.v1.1 MD15G1197200.v1.1
prunus_persica	Prupe.7G218600_v2.0.a1
pyrus_communis	pycom02g05280 pycom15g17620
rosa_chinensis	RchiOBHm_Chr2g0091991
rosa_laevigata	RLG00000016268
rosa_multiflora	Rmu_co8445145.1_g000001 Rmu_sc0000524.1_g000001
rosa_roxburghii	Rroxscaffold_2G00149550
rosa_rugosa	Rorug02G0022200
rosa_samantha	Rh2AG067900 Rh2BG067200 Rh2CG068500
rosa_wichuraiana	Rw2G005320

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1024
AatII	GACGTC	2 cut(s)	872, 1094
Acc36I	ACCTGC	1 cut(s)	46
AccB7I	CCANNNNNTGG	1 cut(s)	1350
AccBSI	CCGCTC	2 cut(s)	270, 400
AccII	CGCG	9 cut(s)	459, 623, 749, 1025, 1100, 1151, 1175, 1177, 1211
AclWI	GGATC	1 cut(s)	1292
AcoI	YGGCCR	3 cut(s)	744, 1095, 1236
AcvI	CACGTG	2 cut(s)	682, 690
AcyI	GRCGYC	4 cut(s)	594, 869, 1071, 1091
AfaI	GTAC	4 cut(s)	369, 509, 788, 1161
AfiI	CCNNNNNNNGG	7 cut(s)	385, 391, 820, 955, 1112, 1144, 1350
AflIII	ACRYGT	1 cut(s)	882
AgsI	TTSAA	2 cut(s)	223, 1273
AhlI	ACTAGT	1 cut(s)	1436
AjuI	GAANNNNNNNTTGG	2 cut(s)	203, 235
AluBI	AGCT	7 cut(s)	124, 251, 341, 436, 756, 934, 1126
AluI	AGCT	7 cut(s)	124, 251, 341, 436, 756, 934, 1126
Alw21I	GWGCWC	3 cut(s)	424, 936, 1128
Alw26I	GTCTC	2 cut(s)	200, 900
AlwI	GGATC	1 cut(s)	1292
Ama87I	CYCGRG	5 cut(s)	322, 899, 918, 935, 1247
ApaI	GGGCCC	1 cut(s)	1375
ApeKI	GCWGC	9 cut(s)	47, 165, 168, 171, 499, 676, 733, 756, 1190
ArsI	GACNNNNNNTTYG	4 cut(s)	511, 543, 822, 854
AspA2I	CCTAGG	1 cut(s)	1111
AspLEI	GCGC	8 cut(s)	461, 700, 751, 1102, 1175, 1177, 1211, 1391
AsuC2I	CCSGG	8 cut(s)	601, 707, 919, 920, 956, 1030, 1318, 1393
AsuHPI	GGTGA	2 cut(s)	1054, 1466
AvaI	CYCGRG	5 cut(s)	322, 899, 918, 935, 1247
AvaII	GGWCC	3 cut(s)	544, 823, 1341
AvrII	CCTAGG	1 cut(s)	1111
BaeGI	GKGCMC	2 cut(s)	687, 1375
BanII	GRGCYC	4 cut(s)	936, 1128, 1248, 1375
BbrPI	CACGTG	2 cut(s)	682, 690
Bbv12I	GWGCWC	3 cut(s)	424, 936, 1128
BbvCI	CCTCAGC	1 cut(s)	1205
BbvI	GCAGC	9 cut(s)	59, 177, 180, 183, 486, 663, 720, 743, 1202
BccI	CCATC	3 cut(s)	87, 194, 841
BceAI	ACGGC	3 cut(s)	893, 1100, 1223
BcgI	CGANNNNNNTGC	6 cut(s)	658, 692, 835, 869, 916, 950
BcnI	CCSGG	8 cut(s)	601, 707, 919, 920, 956, 1030, 1318, 1393
BcoDI	GTCTC	2 cut(s)	200, 900
BcuI	ACTAGT	1 cut(s)	1436
BfaI	CTAG	6 cut(s)	125, 332, 380, 650, 1112, 1437
BfuAI	ACCTGC	1 cut(s)	46
BglI	GCCNNNNNGGC	2 cut(s)	303, 1370
BlnI	CCTAGG	1 cut(s)	1111
BlpI	GCTNAGC	1 cut(s)	271
Bme18I	GGWCC	3 cut(s)	544, 823, 1341
BmeT110I	CYCGRG	5 cut(s)	322, 899, 918, 935, 1247
BmiI	GGNNCC	8 cut(s)	114, 396, 546, 825, 1052, 1342, 1373, 1467
BmrI	ACTGGG	1 cut(s)	1360
BmsI	GCATC	2 cut(s)	161, 1218
BmuI	ACTGGG	1 cut(s)	1360
Bpu10I	CCTNAGC	1 cut(s)	1205
Bpu1102I	GCTNAGC	1 cut(s)	271
BpuMI	CCSGG	8 cut(s)	601, 707, 919, 920, 956, 1030, 1318, 1393
BsaAI	YACGTR	3 cut(s)	682, 690, 883
BsaBI	GATNNNNATC	1 cut(s)	797
BsaHI	GRCGYC	4 cut(s)	594, 869, 1071, 1091
BsaI	GGTCTC	1 cut(s)	200
Bsc4I	CCNNNNNNNGG	7 cut(s)	385, 391, 820, 955, 1112, 1144, 1350
Bse118I	RCCGGY	1 cut(s)	719
Bse1I	ACTGG	2 cut(s)	231, 1355
Bse8I	GATNNNNATC	1 cut(s)	797
BseGI	GGATG	3 cut(s)	1038, 1062, 1233
BseJI	GATNNNNATC	1 cut(s)	797
BseLI	CCNNNNNNNGG	7 cut(s)	385, 391, 820, 955, 1112, 1144, 1350
BseMII	CTCAG	4 cut(s)	285, 456, 1177, 1219
BseNI	ACTGG	2 cut(s)	231, 1355
BsePI	GCGCGC	1 cut(s)	1173
BseRI	GAGGAG	8 cut(s)	125, 1404, 1407, 1410, 1413, 1416, 1419, 1478
BseSI	GKGCMC	2 cut(s)	687, 1375
BseX3I	CGGCCG	1 cut(s)	1095
BseXI	GCAGC	9 cut(s)	59, 177, 180, 183, 486, 663, 720, 743, 1202
BsgI	GTGCAG	1 cut(s)	662
Bsh1236I	CGCG	9 cut(s)	459, 623, 749, 1025, 1100, 1151, 1175, 1177, 1211
Bsh1285I	CGRYCG	2 cut(s)	1098, 1149
BsiEI	CGRYCG	2 cut(s)	1098, 1149
BsiHKAI	GWGCWC	3 cut(s)	424, 936, 1128
BsiHKCI	CYCGRG	5 cut(s)	322, 899, 918, 935, 1247
BslFI	GGGAC	2 cut(s)	199, 1354
BslI	CCNNNNNNNGG	7 cut(s)	385, 391, 820, 955, 1112, 1144, 1350
BsmAI	GTCTC	2 cut(s)	200, 900
BsmBI	CGTCTC	1 cut(s)	900
BsmFI	GGGAC	2 cut(s)	199, 1354
Bso31I	GGTCTC	1 cut(s)	200
BsoBI	CYCGRG	5 cut(s)	322, 899, 918, 935, 1247
Bsp120I	GGGCCC	1 cut(s)	1371
Bsp1286I	GDGCHC	6 cut(s)	424, 687, 936, 1128, 1248, 1375
Bsp143I	GATC	6 cut(s)	792, 798, 876, 1037, 1077, 1284
Bsp1720I	GCTNAGC	1 cut(s)	271
BspCNI	CTCAG	4 cut(s)	284, 455, 1176, 1218
BspFNI	CGCG	9 cut(s)	459, 623, 749, 1025, 1100, 1151, 1175, 1177, 1211
BspHI	TCATGA	1 cut(s)	795
BspLI	GGNNCC	8 cut(s)	114, 396, 546, 825, 1052, 1342, 1373, 1467
BspMI	ACCTGC	1 cut(s)	46
BspPI	GGATC	1 cut(s)	1292
BspQI	GCTCTTC	1 cut(s)	293
BspTNI	GGTCTC	1 cut(s)	200
BsrBI	CCGCTC	2 cut(s)	270, 400
BsrFI	RCCGGY	1 cut(s)	719
BsrI	ACTGG	2 cut(s)	231, 1355
BssAI	RCCGGY	1 cut(s)	719
BssHII	GCGCGC	1 cut(s)	1173
BssMI	GATC	6 cut(s)	792, 798, 876, 1037, 1077, 1284
BssNI	GRCGYC	4 cut(s)	594, 869, 1071, 1091
BssT1I	CCWWGG	1 cut(s)	1111
Bst4CI	ACNGT	3 cut(s)	838, 1147, 1486
Bst6I	CTCTTC	2 cut(s)	293, 1455
BstACI	GRCGYC	4 cut(s)	594, 869, 1071, 1091
BstBAI	YACGTR	3 cut(s)	682, 690, 883
BstC8I	GCNNGC	7 cut(s)	150, 642, 646, 744, 1124, 1139, 1175
BstDEI	CTNAG	4 cut(s)	271, 442, 1163, 1205
BstDSI	CCRYGG	2 cut(s)	1233, 1344
BstF5I	GGATG	3 cut(s)	1038, 1062, 1233
BstFNI	CGCG	9 cut(s)	459, 623, 749, 1025, 1100, 1151, 1175, 1177, 1211
BstHHI	GCGC	8 cut(s)	461, 700, 751, 1102, 1175, 1177, 1211, 1391
BstKTI	GATC	6 cut(s)	795, 801, 879, 1040, 1080, 1287
BstMAI	GTCTC	2 cut(s)	200, 900
BstMBI	GATC	6 cut(s)	792, 798, 876, 1037, 1077, 1284
BstMCI	CGRYCG	2 cut(s)	1098, 1149
BstSLI	GKGCMC	2 cut(s)	687, 1375
BstUI	CGCG	9 cut(s)	459, 623, 749, 1025, 1100, 1151, 1175, 1177, 1211
BstV1I	GCAGC	9 cut(s)	59, 177, 180, 183, 486, 663, 720, 743, 1202
BstXI	CCANNNNNNTGG	1 cut(s)	988
BstZI	CGGCCG	1 cut(s)	1095
BtgI	CCRYGG	2 cut(s)	1233, 1344
BtgZI	GCGATG	1 cut(s)	1413
BtsCI	GGATG	3 cut(s)	1038, 1062, 1233
BtsIMutI	CAGTG	1 cut(s)	1491
BveI	ACCTGC	1 cut(s)	46
Cac8I	GCNNGC	7 cut(s)	150, 642, 646, 744, 1124, 1139, 1175
CciI	TCATGA	1 cut(s)	795
CfoI	GCGC	8 cut(s)	461, 700, 751, 1102, 1175, 1177, 1211, 1391
Cfr10I	RCCGGY	1 cut(s)	719
Cfr9I	CCCGGG	1 cut(s)	918
CseI	GACGC	5 cut(s)	583, 612, 1014, 1079, 1166
Csp6I	GTAC	4 cut(s)	368, 508, 787, 1160
CviAII	CATG	6 cut(s)	283, 391, 562, 580, 796, 1000
CviQI	GTAC	4 cut(s)	368, 508, 787, 1160
DdeI	CTNAG	4 cut(s)	271, 442, 1163, 1205
DpnI	GATC	6 cut(s)	794, 800, 878, 1039, 1079, 1286
DpnII	GATC	6 cut(s)	792, 798, 876, 1037, 1077, 1284
DrdI	GACNNNNNNGTC	1 cut(s)	1024
DseDI	GACNNNNNNGTC	1 cut(s)	1024
EaeI	YGGCCR	3 cut(s)	744, 1095, 1236
EagI	CGGCCG	1 cut(s)	1095
Eam1104I	CTCTTC	2 cut(s)	293, 1455
EarI	CTCTTC	2 cut(s)	293, 1455
EciI	GGCGGA	3 cut(s)	575, 607, 1000
Ecl136II	GAGCTC	2 cut(s)	934, 1126
EclXI	CGGCCG	1 cut(s)	1095
Eco130I	CCWWGG	1 cut(s)	1111
Eco147I	AGGCCT	1 cut(s)	1116
Eco24I	GRGCYC	4 cut(s)	936, 1128, 1248, 1375
Eco31I	GGTCTC	1 cut(s)	200
Eco47I	GGWCC	3 cut(s)	544, 823, 1341
Eco52I	CGGCCG	1 cut(s)	1095
Eco53kI	GAGCTC	2 cut(s)	934, 1126
Eco72I	CACGTG	2 cut(s)	682, 690
Eco88I	CYCGRG	5 cut(s)	322, 899, 918, 935, 1247
EcoICRI	GAGCTC	2 cut(s)	934, 1126
EcoO109I	RGGNCCY	2 cut(s)	544, 1371
EcoT14I	CCWWGG	1 cut(s)	1111
EcoT38I	GRGCYC	4 cut(s)	936, 1128, 1248, 1375
ErhI	CCWWGG	1 cut(s)	1111
Esp3I	CGTCTC	1 cut(s)	900
FaeI	CATG	6 cut(s)	286, 394, 565, 583, 799, 1003
FaqI	GGGAC	2 cut(s)	199, 1354
FatI	CATG	6 cut(s)	282, 390, 561, 579, 795, 999
FauI	CCCGC	2 cut(s)	275, 1146
FokI	GGATG	3 cut(s)	1045, 1069, 1240
FriOI	GRGCYC	4 cut(s)	936, 1128, 1248, 1375
FspBI	CTAG	6 cut(s)	125, 332, 380, 650, 1112, 1437
GlaI	GCGC	8 cut(s)	460, 699, 750, 1101, 1174, 1176, 1210, 1390
HgaI	GACGC	5 cut(s)	583, 612, 1014, 1079, 1166
HhaI	GCGC	8 cut(s)	461, 700, 751, 1102, 1175, 1177, 1211, 1391
Hin1I	GRCGYC	4 cut(s)	594, 869, 1071, 1091
Hin1II	CATG	6 cut(s)	286, 394, 565, 583, 799, 1003
Hin6I	GCGC	8 cut(s)	459, 698, 749, 1100, 1173, 1175, 1209, 1389
HinP1I	GCGC	8 cut(s)	459, 698, 749, 1100, 1173, 1175, 1209, 1389
HincII	GTYRAC	1 cut(s)	1201
HindII	GTYRAC	1 cut(s)	1201
HindIII	AAGCTT	1 cut(s)	434
HinfI	GANTC	3 cut(s)	1263, 1278, 1445
HphI	GGTGA	2 cut(s)	1054, 1466
Hpy166II	GTNNAC	6 cut(s)	693, 823, 915, 1062, 1160, 1201
Hpy188I	TCNGA	5 cut(s)	109, 419, 432, 1182, 1262
Hpy188III	TCNNGA	5 cut(s)	89, 517, 796, 1282, 1503
Hpy8I	GTNNAC	6 cut(s)	693, 823, 915, 1062, 1160, 1201
Hpy99I	CGWCG	7 cut(s)	599, 842, 871, 874, 895, 1073, 1096
HpyAV	CCTTC	6 cut(s)	27, 241, 424, 1003, 1030, 1500
HpyCH4III	ACNGT	3 cut(s)	838, 1147, 1486
HpyCH4IV	ACGT	9 cut(s)	195, 427, 660, 681, 689, 869, 882, 1091, 1197
HpyCH4V	TGCA	2 cut(s)	656, 679
HpyF3I	CTNAG	4 cut(s)	271, 442, 1163, 1205
HpySE526I	ACGT	9 cut(s)	195, 427, 660, 681, 689, 869, 882, 1091, 1197
Hsp92I	GRCGYC	4 cut(s)	594, 869, 1071, 1091
Hsp92II	CATG	6 cut(s)	286, 394, 565, 583, 799, 1003
HspAI	GCGC	8 cut(s)	459, 698, 749, 1100, 1173, 1175, 1209, 1389
Kzo9I	GATC	6 cut(s)	792, 798, 876, 1037, 1077, 1284
LguI	GCTCTTC	1 cut(s)	293
LmnI	GCTCC	7 cut(s)	52, 112, 394, 419, 588, 741, 1465
Lsp1109I	GCAGC	9 cut(s)	59, 177, 180, 183, 486, 663, 720, 743, 1202
LweI	GCATC	2 cut(s)	161, 1218
MaeI	CTAG	6 cut(s)	125, 332, 380, 650, 1112, 1437
MaeII	ACGT	9 cut(s)	195, 427, 660, 681, 689, 869, 882, 1091, 1197
MaeIII	GTNAC	2 cut(s)	327, 445
MalI	GATC	6 cut(s)	794, 800, 878, 1039, 1079, 1286
MbiI	CCGCTC	2 cut(s)	270, 400
MboI	GATC	6 cut(s)	792, 798, 876, 1037, 1077, 1284
MboII	GAAGA	8 cut(s)	280, 460, 527, 1469, 1472, 1485, 1488, 1491
MhlI	GDGCHC	6 cut(s)	424, 687, 936, 1128, 1248, 1375
MluCI	AATT	2 cut(s)	25, 180
MlyI	GAGTC	2 cut(s)	1272, 1272
MmeI	TCCRAC	4 cut(s)	651, 1205, 1240, 1457
MseI	TTAA	1 cut(s)	24
MslI	CAYNNNNRTG	2 cut(s)	560, 1484
MspA1I	CMGCKG	3 cut(s)	50, 733, 971
MvnI	CGCG	9 cut(s)	459, 623, 749, 1025, 1100, 1151, 1175, 1177, 1211
NciI	CCSGG	8 cut(s)	601, 707, 919, 920, 956, 1030, 1318, 1393
NdeII	GATC	6 cut(s)	792, 798, 876, 1037, 1077, 1284
NlaIII	CATG	6 cut(s)	286, 394, 565, 583, 799, 1003
NlaIV	GGNNCC	8 cut(s)	114, 396, 546, 825, 1052, 1342, 1373, 1467
NmeAIII	GCCGAG	5 cut(s)	570, 726, 777, 1099, 1107
NmuCI	GTSAC	2 cut(s)	327, 445
PagI	TCATGA	1 cut(s)	795
PasI	CCCWGGG	2 cut(s)	385, 1375
PauI	GCGCGC	1 cut(s)	1173
PceI	AGGCCT	1 cut(s)	1116
PciSI	GCTCTTC	1 cut(s)	293
PcsI	WCGNNNNNNNCGW	2 cut(s)	906, 1022
PfeI	GAWTC	1 cut(s)	1445
PflFI	GACNNNGTC	2 cut(s)	197, 211
PflMI	CCANNNNNTGG	1 cut(s)	1350
PfoI	TCCNGGA	1 cut(s)	1028
PleI	GAGTC	2 cut(s)	1271, 1272
PmaCI	CACGTG	2 cut(s)	682, 690
PmlI	CACGTG	2 cut(s)	682, 690
PpsI	GAGTC	2 cut(s)	1271, 1272
Ppu21I	YACGTR	3 cut(s)	682, 690, 883
PpuMI	RGGWCCY	1 cut(s)	544
Psp124BI	GAGCTC	2 cut(s)	936, 1128
Psp5II	RGGWCCY	1 cut(s)	544
PspCI	CACGTG	2 cut(s)	682, 690
PspN4I	GGNNCC	8 cut(s)	114, 396, 546, 825, 1052, 1342, 1373, 1467
PspOMI	GGGCCC	1 cut(s)	1371
PspPPI	RGGWCCY	1 cut(s)	544
PsyI	GACNNNGTC	2 cut(s)	197, 211
PteI	GCGCGC	1 cut(s)	1173
RsaI	GTAC	4 cut(s)	369, 509, 788, 1161
RsaNI	GTAC	4 cut(s)	368, 508, 787, 1160
RseI	CAYNNNNRTG	2 cut(s)	560, 1484
SacI	GAGCTC	2 cut(s)	936, 1128
SapI	GCTCTTC	1 cut(s)	293
SaqAI	TTAA	1 cut(s)	24
Sau3AI	GATC	6 cut(s)	792, 798, 876, 1037, 1077, 1284
SchI	GAGTC	2 cut(s)	1272, 1272
SduI	GDGCHC	6 cut(s)	424, 687, 936, 1128, 1248, 1375
SfaNI	GCATC	2 cut(s)	161, 1218
SfiI	GGCCNNNNNGGCC	1 cut(s)	1370
SinI	GGWCC	3 cut(s)	544, 823, 1341
SmaI	CCCGGG	1 cut(s)	920
SmiMI	CAYNNNNRTG	2 cut(s)	560, 1484
SpeI	ACTAGT	1 cut(s)	1436
Sse9I	AATT	2 cut(s)	25, 180
SseBI	AGGCCT	1 cut(s)	1116
SspMI	CTAG	6 cut(s)	125, 332, 380, 650, 1112, 1437
SstI	GAGCTC	2 cut(s)	936, 1128
StuI	AGGCCT	1 cut(s)	1116
StyI	CCWWGG	1 cut(s)	1111
TaaI	ACNGT	3 cut(s)	838, 1147, 1486
TaiI	ACGT	9 cut(s)	198, 430, 663, 684, 692, 872, 885, 1094, 1200
TaqI	TCGA	4 cut(s)	90, 155, 518, 845
TasI	AATT	2 cut(s)	25, 180
TatI	WGTACW	1 cut(s)	1159
TauI	GCSGC	9 cut(s)	118, 300, 400, 611, 614, 623, 733, 749, 1100
TfiI	GAWTC	1 cut(s)	1445
Tru1I	TTAA	1 cut(s)	24
Tru9I	TTAA	1 cut(s)	24
TscAI	CASTG	1 cut(s)	1491
TseFI	GTSAC	2 cut(s)	327, 445
TseI	GCWGC	9 cut(s)	47, 165, 168, 171, 499, 676, 733, 756, 1190
Tsp45I	GTSAC	2 cut(s)	327, 445
TspDTI	ATGAA	1 cut(s)	50
TspGWI	ACGGA	3 cut(s)	355, 754, 1361
TspMI	CCCGGG	1 cut(s)	918
TspRI	CASTG	1 cut(s)	1491
Tth111I	GACNNNGTC	2 cut(s)	197, 211
Van91I	CCANNNNNTGG	1 cut(s)	1350
VpaK11BI	GGWCC	3 cut(s)	544, 823, 1341
XcmI	CCANNNNNNNNNTGG	1 cut(s)	289
XmaI	CCCGGG	1 cut(s)	918
XmaJI	CCTAGG	1 cut(s)	1111
XspI	CTAG	6 cut(s)	125, 332, 380, 650, 1112, 1437
ZraI	GACGTC	2 cut(s)	870, 1092

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.