Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr15

Orthogroup ID

OG0011869

Physical Location & Seq

Genomic Coordinates Forward (+)

12485153 .. 12487652

Gene Structure 2500 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom15g17620.5

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2052 bp

ATGCCAGAACTCAAACAGTCAGACTGCGAGCAGCAGAGACGGACAGCTCTTAAGAGCATAAAGATAAACAAAGTTCAAAGGCAAATGAGAAAGACGGAAACACCCCTCCTCATCACACCTCTATTTATACTTGTACATCCCTTACATCTACCCCCAAAAAACCAACCCATCATCCATCTATCCATCCCCACTCAATTTGAAGTCATTAGAGTGCTCTCTACGGGAGTATCTCCTTCTCTATCCTCTCTCCTTTTCTCTCTAAAAAACAGAGAATCGTTCAAAAACAGAAACAATCGGTCATCGCATACAAACGAAACAAATACATTTCTTTGTTTTTCCGTAGTTCCAAACCCTTCATCCACAGCCACGAAAACAGAGCATCATCACCATCAGCCGCCGCAGCCCCACTTGTTCCTAGACTTCTTATCCTTACCAGAAGCTCCAAAGCCGCCTCCGCTGCCACATTTCACAAGTTCACTTGCTGTTTCGGACATAGTCGCCGAGACCAAGTCTCTGTTTCAGCTGGCCTTCCCAATCCTCCTCACCGCCCTCATTCTCTACTCCCGCTCGGTCGTCTCGATGCTCTTCCTTGGCCACCTCGGCGACCTCGAGCTCGCCGCTGGATCCCTCGCCATCGCATTCGCTAACATCACCGGCTACTCCGTCCTCTCCGGACTAGCCCTGGGCATGGAACCTCTCTGTTCCCAAGCCTTCGGTGCCCAACGTCCGAAGCTCCTCTCCTTGACCCTCCACCGCTCCGTCATCTTCCTCACCCTCGCATCGCTGCCCATTTCGCTCTTCTGGGTCAGCATGTCAGTAATCCTCTTGTACCTCCGCCAGGACCCAGATATCACCGCCGTGGCCCACACCTATCTCATCTTCTCCCTCCCTGACCTCTTCACAAACTCCCTCATTCACCCAATCCGCATATACCTTCGCGCGCAGGGAATCACCCACCCGCTCACGTTAGCATCCCTCGCCGGCGCGCTCTTCCACCTTCCGATGAACCTCCTGTTAGTCACTCGGCTCCAGCTCGGAGTGGCCGGAGTCGCGGCGGCTTCCGCCGCTTCCAATCTATTTGTTTTACTGGCCCTCGTGTCGTACGTGTGGGCCACAGGGATCCACGAGCCAACGTGGACGAAGCCGAGCCGCGAGTGCCTGACAGGTTGGAAGCCACTGCTTCGGCTGGCAGCACCGAGCTGCGTTTCCGTGTGCTTGGAGTGGTGGTGGTATGAGATCATGATCGTCCTGTGCGGGCTCCTCGTGGACCCCAGAGCAACCGTCGCCTCGATGGGCGTGCTTATCCAAACGACGTCGCTGATATACGCGTTCCCGTCCTCCTTGAGCTTCGCGGTCTCGACGCGGGTCGGGAACGAGCTCGGGGCGAACCGACCGCACAAGGCAAAGTTATCCTCTGCGGTGGCGGTCATGATTGCGTTCTTGATGGGCCTATCCGCGACGAGTTTCGCGTCTGGGATGCGGGGGAGCTGGGCTCGGATGTTCACCAGCGACGCGGAGATCGTGCGGCTGACGTCGGCGGCGCTGCCGATCCTAGGCCTGTGCGAGCTTGGCAACTGCCCGCAGACAGTGGGTTGTGGGGTCCTCAGAGGCAGCGCACGTCCGTCCACCGCCCGTGGCCGTGGGACTCGGGTTCTGGGTAGGAATCGGGTTTTGCGGATTATGGATCGATGGTTGCTGTCAGCCCAGGTTTGTTGTGCTGGGCTGATGTTGTATGTGGTTGGGACCACAGACTGGGATCTTCAAGCTAAGAGGGCCCAGTCGCTAACGTGCGCCGGGAGTGAAATCACAGCACCTGATTGTAAGGTTGTTGAGGAACAGCAGCCGTTGATTGTTATTACGGTGCCTTCTTCTCGATTTTTTTATATAATTATTTCTTTCTTTCTTTCTTTTTTTTTTTCTGTGAATTATATTAATTCTACAATTTTGTTCTCTCTTATTTATCTGTGGATGCCTAGTGGATTTTGCTTTATATTTTGCACGGACTCATTCACAATAAGTGACTTTGGTTTGATTAATAAATTATTCATATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005215 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005768 GO:0005770 GO:0006810 GO:0006855 GO:0007275 GO:0007568 GO:0008150 GO:0009653 GO:0010008 GO:0010015 GO:0010150 GO:0010252 GO:0012505 GO:0015238 GO:0015893 GO:0016020 GO:0022622 GO:0022857 GO:0031090 GO:0031347 GO:0031348 GO:0031410 GO:0031982 GO:0032501 GO:0032502 GO:0040008 GO:0042221 GO:0042493 GO:0042592 GO:0043226 GO:0043227 GO:0043229 GO:0044422 GO:0044424 GO:0044433 GO:0044440 GO:0044444 GO:0044446 GO:0044464 GO:0046620 GO:0048364 GO:0048366 GO:0048367 GO:0048519 GO:0048583 GO:0048585 GO:0048638 GO:0048731 GO:0048827 GO:0048856 GO:0048878 GO:0050789 GO:0050793 GO:0050801 GO:0050896 GO:0051179 GO:0051234 GO:0051239 GO:0055065 GO:0055072 GO:0055076 GO:0055080 GO:0055085 GO:0065007 GO:0065008 GO:0080134 GO:0090693 GO:0097708 GO:0098588 GO:0098771 GO:0098805 GO:0099402 GO:1905392

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

MatE

Protein Analysis

684

Amino Acids

75.09

Weight (kDa)

9.31

Isoelectric Point (pI)

38.29

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0011869)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G29140
fragaria_vesca	FvH4_1g06290 FvH4_3g02790 FvH4_3g02831
malus_domestica	MD02G1066700.v1.1 MD15G1197200.v1.1
prunus_persica	Prupe.7G218600_v2.0.a1
pyrus_communis	pycom02g05280 pycom15g17620
rosa_chinensis	RchiOBHm_Chr2g0091991
rosa_laevigata	RLG00000016268
rosa_multiflora	Rmu_co8445145.1_g000001 Rmu_sc0000524.1_g000001
rosa_roxburghii	Rroxscaffold_2G00149550
rosa_rugosa	Rorug02G0022200
rosa_samantha	Rh2AG067900 Rh2BG067200 Rh2CG068500
rosa_wichuraiana	Rw2G005320

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	2 cut(s)	1316, 1535
AccB1I	GGYRCC	2 cut(s)	716, 1861
AccB7I	CCANNNNNTGG	1 cut(s)	1752
AccBSI	CCGCTC	3 cut(s)	567, 756, 961
AccIII	TCCGGA	1 cut(s)	671
AclWI	GGATC	7 cut(s)	618, 631, 1114, 1127, 1543, 1692, 1764
AcoI	YGGCCR	3 cut(s)	592, 1041, 1636
AcyI	GRCGYC	2 cut(s)	1313, 1532
AfaI	GTAC	3 cut(s)	135, 830, 1103
AfiI	CCNNNNNNNGG	4 cut(s)	688, 838, 1553, 1752
AflII	CTTAAG	1 cut(s)	50
AflIII	ACRYGT	2 cut(s)	1104, 1326
AgsI	TTSAA	4 cut(s)	77, 200, 280, 1763
AjiI	CACGTC	1 cut(s)	1619
AjnI	CCWGG	3 cut(s)	681, 837, 1704
AleI	CACNNNNGTG	1 cut(s)	857
Alw21I	GWGCWC	3 cut(s)	216, 615, 1380
Alw26I	GTCTC	5 cut(s)	31, 497, 516, 580, 1360
AlwI	GGATC	7 cut(s)	618, 631, 1114, 1127, 1543, 1692, 1764
AlwNI	CAGNNNCTG	1 cut(s)	1814
Ama87I	CYCGRG	3 cut(s)	608, 1379, 1647
Aor13HI	TCCGGA	1 cut(s)	671
ApaI	GGGCCC	1 cut(s)	1777
ApeKI	GCWGC	9 cut(s)	31, 400, 457, 784, 1190, 1200, 1543, 1611, 1840
AseI	ATTAAT	2 cut(s)	1932, 2034
AspA2I	CCTAGG	1 cut(s)	1552
AspLEI	GCGC	7 cut(s)	941, 943, 986, 988, 1543, 1616, 1793
AsuC2I	CCSGG	1 cut(s)	1795
AsuHPI	GGTGA	8 cut(s)	377, 535, 643, 763, 844, 908, 943, 1495
AvaI	CYCGRG	3 cut(s)	608, 1379, 1647
AvaII	GGWCC	4 cut(s)	841, 1267, 1600, 1743
AvrII	CCTAGG	1 cut(s)	1552
BaeGI	GKGCMC	2 cut(s)	721, 1777
BaeI	ACNNNNGTAYC	2 cut(s)	210, 243
BalI	TGGCCA	1 cut(s)	594
BamHI	GGATCC	2 cut(s)	623, 1119
BanI	GGYRCC	2 cut(s)	716, 1861
BanII	GRGCYC	5 cut(s)	615, 1260, 1380, 1495, 1777
BauI	CACGAG	3 cut(s)	1094, 1124, 1262
Bbv12I	GWGCWC	3 cut(s)	216, 615, 1380
BbvI	GCAGC	9 cut(s)	43, 412, 444, 771, 1187, 1202, 1530, 1623, 1852
BccI	CCATC	8 cut(s)	176, 183, 191, 396, 641, 1285, 1438, 1683
BceAI	ACGGC	3 cut(s)	842, 1623, 1828
BcgI	CGANNNNNNTGC	2 cut(s)	1279, 1313
BciT130I	CCWGG	3 cut(s)	683, 839, 1706
BcnI	CCSGG	1 cut(s)	1795
BcoDI	GTCTC	5 cut(s)	31, 497, 516, 580, 1360
BfaI	CTAG	4 cut(s)	416, 677, 1553, 1974
BfoI	RGCGCY	1 cut(s)	1544
BfrI	CTTAAG	1 cut(s)	50
BglI	GCCNNNNNGGC	1 cut(s)	600
BlnI	CCTAGG	1 cut(s)	1552
Bme1390I	CCNGG	4 cut(s)	683, 839, 1706, 1795
Bme18I	GGWCC	4 cut(s)	841, 1267, 1600, 1743
BmeT110I	CYCGRG	3 cut(s)	608, 1379, 1647
BmgBI	CACGTC	1 cut(s)	1619
BmrFI	CCNGG	4 cut(s)	683, 839, 1706, 1795
BmrI	ACTGGG	2 cut(s)	1762, 1771
BmsI	GCATC	6 cut(s)	388, 570, 788, 980, 1467, 1959
BmuI	ACTGGG	2 cut(s)	1762, 1771
BoxI	GACNNNNGTC	1 cut(s)	1364
BplI	GAGNNNNNCTC	2 cut(s)	1477, 1509
BpmI	CTGGAG	1 cut(s)	1013
BpuEI	CTTGAG	1 cut(s)	1363
BpuMI	CCSGG	1 cut(s)	1795
Bsa29I	ATCGAT	1 cut(s)	1687
BsaAI	YACGTR	1 cut(s)	1105
BsaBI	GATNNNNATC	1 cut(s)	1241
BsaHI	GRCGYC	2 cut(s)	1313, 1532
BsaI	GGTCTC	2 cut(s)	497, 1360
BsaJI	CCNNGG	9 cut(s)	589, 598, 681, 682, 858, 1552, 1633, 1639, 1704
BsaWI	WCCGGW	1 cut(s)	671
BsaXI	ACNNNNNCTCC	2 cut(s)	1211, 1241
Bsc4I	CCNNNNNNNGG	4 cut(s)	688, 838, 1553, 1752
Bse118I	RCCGGY	2 cut(s)	653, 980
Bse1I	ACTGG	3 cut(s)	1092, 1757, 1777
Bse8I	GATNNNNATC	1 cut(s)	1241
BseAI	TCCGGA	1 cut(s)	671
BseBI	CCWGG	3 cut(s)	683, 839, 1706
BseCI	ATCGAT	1 cut(s)	1687
BseDI	CCNNGG	9 cut(s)	589, 598, 681, 682, 858, 1552, 1633, 1639, 1704
BseGI	GGATG	8 cut(s)	136, 171, 183, 356, 971, 1482, 1503, 1974
BseJI	GATNNNNATC	1 cut(s)	1241
BseLI	CCNNNNNNNGG	4 cut(s)	688, 838, 1553, 1752
BseMII	CTCAG	1 cut(s)	1618
BseNI	ACTGG	3 cut(s)	1092, 1757, 1777
BsePI	GCGCGC	2 cut(s)	939, 984
BseRI	GAGGAG	4 cut(s)	98, 530, 725, 1250
BseSI	GKGCMC	2 cut(s)	721, 1777
BseXI	GCAGC	9 cut(s)	43, 412, 444, 771, 1187, 1202, 1530, 1623, 1852
BseYI	CCCAGC	2 cut(s)	1488, 1718
Bsh1285I	CGRYCG	2 cut(s)	573, 1394
BshNI	GGYRCC	2 cut(s)	716, 1861
BshVI	ATCGAT	1 cut(s)	1687
BsiEI	CGRYCG	2 cut(s)	573, 1394
BsiHKAI	GWGCWC	3 cut(s)	216, 615, 1380
BsiHKCI	CYCGRG	3 cut(s)	608, 1379, 1647
BsiSI	CCGG	5 cut(s)	654, 672, 981, 1044, 1794
BsiWI	CGTACG	1 cut(s)	1101
BslFI	GGGAC	2 cut(s)	1657, 1756
BslI	CCNNNNNNNGG	4 cut(s)	688, 838, 1553, 1752
BsmAI	GTCTC	5 cut(s)	31, 497, 516, 580, 1360
BsmBI	CGTCTC	2 cut(s)	31, 580
BsmFI	GGGAC	2 cut(s)	1657, 1756
BsmI	GAATGC	1 cut(s)	638
Bso31I	GGTCTC	2 cut(s)	497, 1360
BsoBI	CYCGRG	3 cut(s)	608, 1379, 1647
Bsp120I	GGGCCC	1 cut(s)	1773
Bsp1286I	GDGCHC	7 cut(s)	216, 615, 721, 1260, 1380, 1495, 1777
Bsp13I	TCCGGA	1 cut(s)	671
Bsp1407I	TGTACA	1 cut(s)	133
Bsp143I	GATC	8 cut(s)	623, 1119, 1236, 1242, 1518, 1548, 1684, 1756
BspCNI	CTCAG	1 cut(s)	1617
BspDI	ATCGAT	1 cut(s)	1687
BspEI	TCCGGA	1 cut(s)	671
BspHI	TCATGA	2 cut(s)	1239, 1428
BspPI	GGATC	7 cut(s)	618, 631, 1114, 1127, 1543, 1692, 1764
BspQI	GCTCTTC	3 cut(s)	590, 803, 995
BspT107I	GGYRCC	2 cut(s)	716, 1861
BspTI	CTTAAG	1 cut(s)	50
BspTNI	GGTCTC	2 cut(s)	497, 1360
BsrBI	CCGCTC	3 cut(s)	567, 756, 961
BsrFI	RCCGGY	2 cut(s)	653, 980
BsrGI	TGTACA	1 cut(s)	133
BsrI	ACTGG	3 cut(s)	1092, 1757, 1777
BssAI	RCCGGY	2 cut(s)	653, 980
BssECI	CCNNGG	9 cut(s)	589, 598, 681, 682, 858, 1552, 1633, 1639, 1704
BssHII	GCGCGC	2 cut(s)	939, 984
BssMI	GATC	8 cut(s)	623, 1119, 1236, 1242, 1518, 1548, 1684, 1756
BssNI	GRCGYC	2 cut(s)	1313, 1532
BssSI	CACGAG	3 cut(s)	1094, 1124, 1262
BssT1I	CCWWGG	2 cut(s)	589, 1552
Bst2BI	CACGAG	3 cut(s)	1094, 1124, 1262
Bst2UI	CCWGG	3 cut(s)	683, 839, 1706
Bst4CI	ACNGT	4 cut(s)	18, 1282, 1588, 1861
Bst6I	CTCTTC	4 cut(s)	590, 803, 902, 995
BstACI	GRCGYC	2 cut(s)	1313, 1532
BstAFI	CTTAAG	1 cut(s)	50
BstAUI	TGTACA	1 cut(s)	133
BstBAI	YACGTR	1 cut(s)	1105
BstDEI	CTNAG	2 cut(s)	1604, 1767
BstDSI	CCRYGG	3 cut(s)	858, 1633, 1639
BstENI	CCTNNNNNAGG	1 cut(s)	836
BstF5I	GGATG	8 cut(s)	136, 171, 183, 356, 971, 1482, 1503, 1974
BstH2I	RGCGCY	1 cut(s)	1544
BstHHI	GCGC	7 cut(s)	941, 943, 986, 988, 1543, 1616, 1793
BstKTI	GATC	8 cut(s)	626, 1122, 1239, 1245, 1521, 1551, 1687, 1759
BstMAI	GTCTC	5 cut(s)	31, 497, 516, 580, 1360
BstMBI	GATC	8 cut(s)	623, 1119, 1236, 1242, 1518, 1548, 1684, 1756
BstMCI	CGRYCG	2 cut(s)	573, 1394
BstNI	CCWGG	3 cut(s)	683, 839, 1706
BstNSI	RCATGY	1 cut(s)	814
BstPAI	GACNNNNGTC	1 cut(s)	1364
BstSCI	CCNGG	4 cut(s)	681, 837, 1704, 1793
BstSLI	GKGCMC	2 cut(s)	721, 1777
BstV1I	GCAGC	9 cut(s)	43, 412, 444, 771, 1187, 1202, 1530, 1623, 1852
BstX2I	RGATCY	3 cut(s)	623, 1119, 1756
BstYI	RGATCY	3 cut(s)	623, 1119, 1756
Bsu15I	ATCGAT	1 cut(s)	1687
BsuTUI	ATCGAT	1 cut(s)	1687
BtgI	CCRYGG	3 cut(s)	858, 1633, 1639
BtgZI	GCGATG	3 cut(s)	285, 619, 765
BtrI	CACGTC	1 cut(s)	1619
BtsCI	GGATG	8 cut(s)	136, 171, 183, 356, 971, 1482, 1503, 1974
BtsI	GCAGTG	1 cut(s)	1175
BtsIMutI	CAGTG	2 cut(s)	1175, 1593
CaiI	CAGNNNCTG	1 cut(s)	1814
CciI	TCATGA	2 cut(s)	1239, 1428
CfoI	GCGC	7 cut(s)	941, 943, 986, 988, 1543, 1616, 1793
Cfr10I	RCCGGY	2 cut(s)	653, 980
ClaI	ATCGAT	1 cut(s)	1687
CseI	GACGC	3 cut(s)	1369, 1458, 1520
Csp6I	GTAC	3 cut(s)	134, 829, 1102
CspCI	CAANNNNNGTGG	2 cut(s)	178, 213
CviAII	CATG	4 cut(s)	688, 811, 1240, 1429
CviQI	GTAC	3 cut(s)	134, 829, 1102
DdeI	CTNAG	2 cut(s)	1604, 1767
DpnI	GATC	8 cut(s)	625, 1121, 1238, 1244, 1520, 1550, 1686, 1758
DpnII	GATC	8 cut(s)	623, 1119, 1236, 1242, 1518, 1548, 1684, 1756
EaeI	YGGCCR	3 cut(s)	592, 1041, 1636
Eam1104I	CTCTTC	4 cut(s)	590, 803, 902, 995
EarI	CTCTTC	4 cut(s)	590, 803, 902, 995
EciI	GGCGGA	2 cut(s)	824, 1051
Ecl136II	GAGCTC	2 cut(s)	613, 1378
Eco130I	CCWWGG	2 cut(s)	589, 1552
Eco147I	AGGCCT	1 cut(s)	1557
Eco24I	GRGCYC	5 cut(s)	615, 1260, 1380, 1495, 1777
Eco31I	GGTCTC	2 cut(s)	497, 1360
Eco32I	GATATC	1 cut(s)	850
Eco47I	GGWCC	4 cut(s)	841, 1267, 1600, 1743
Eco53kI	GAGCTC	2 cut(s)	613, 1378
Eco88I	CYCGRG	3 cut(s)	608, 1379, 1647
EcoICRI	GAGCTC	2 cut(s)	613, 1378
EcoNI	CCTNNNNNAGG	1 cut(s)	836
EcoO109I	RGGNCCY	3 cut(s)	841, 1600, 1773
EcoRII	CCWGG	3 cut(s)	681, 837, 1704
EcoRV	GATATC	1 cut(s)	850
EcoT14I	CCWWGG	2 cut(s)	589, 1552
EcoT38I	GRGCYC	5 cut(s)	615, 1260, 1380, 1495, 1777
ErhI	CCWWGG	2 cut(s)	589, 1552
Esp3I	CGTCTC	2 cut(s)	31, 580
FaeI	CATG	4 cut(s)	691, 814, 1243, 1432
FaqI	GGGAC	2 cut(s)	1657, 1756
FatI	CATG	4 cut(s)	687, 810, 1239, 1428
FauI	CCCGC	6 cut(s)	572, 966, 1247, 1356, 1473, 1587
FokI	GGATG	8 cut(s)	123, 158, 170, 343, 958, 1489, 1510, 1981
FriOI	GRGCYC	5 cut(s)	615, 1260, 1380, 1495, 1777
FspBI	CTAG	4 cut(s)	416, 677, 1553, 1974
GlaI	GCGC	7 cut(s)	940, 942, 985, 987, 1542, 1615, 1792
GsaI	CCCAGC	2 cut(s)	1492, 1722
GsuI	CTGGAG	1 cut(s)	1013
HaeII	RGCGCY	1 cut(s)	1544
HapII	CCGG	5 cut(s)	654, 672, 981, 1044, 1794
HgaI	GACGC	3 cut(s)	1369, 1458, 1520
HhaI	GCGC	7 cut(s)	941, 943, 986, 988, 1543, 1616, 1793
Hin1I	GRCGYC	2 cut(s)	1313, 1532
Hin1II	CATG	4 cut(s)	691, 814, 1243, 1432
Hin6I	GCGC	7 cut(s)	939, 941, 984, 986, 1541, 1614, 1791
HinP1I	GCGC	7 cut(s)	939, 941, 984, 986, 1541, 1614, 1791
HinfI	GANTC	6 cut(s)	272, 948, 1047, 1645, 1663, 2003
HpaII	CCGG	5 cut(s)	654, 672, 981, 1044, 1794
HphI	GGTGA	8 cut(s)	377, 535, 643, 763, 844, 908, 943, 1495
Hpy166II	GTNNAC	5 cut(s)	476, 1137, 1267, 1503, 1626
Hpy188I	TCNGA	7 cut(s)	22, 490, 729, 1002, 1037, 1497, 1607
Hpy188III	TCNNGA	8 cut(s)	577, 672, 1240, 1357, 1369, 1429, 1441, 1872
Hpy8I	GTNNAC	5 cut(s)	476, 1137, 1267, 1503, 1626
Hpy99I	CGWCG	7 cut(s)	1286, 1315, 1318, 1363, 1462, 1514, 1537
HpyAV	CCTTC	7 cut(s)	243, 363, 538, 721, 944, 1007, 1875
HpyCH4III	ACNGT	4 cut(s)	18, 1282, 1588, 1861
HpyCH4IV	ACGT	8 cut(s)	724, 965, 1104, 1133, 1313, 1532, 1618, 1787
HpyCH4V	TGCA	1 cut(s)	1998
HpyF3I	CTNAG	2 cut(s)	1604, 1767
HpySE526I	ACGT	8 cut(s)	724, 965, 1104, 1133, 1313, 1532, 1618, 1787
Hsp92I	GRCGYC	2 cut(s)	1313, 1532
Hsp92II	CATG	4 cut(s)	691, 814, 1243, 1432
HspAI	GCGC	7 cut(s)	939, 941, 984, 986, 1541, 1614, 1791
Kpn2I	TCCGGA	1 cut(s)	671
KroI	GCCGGC	1 cut(s)	980
KroNI	GCCGGC	1 cut(s)	982
Kzo9I	GATC	8 cut(s)	623, 1119, 1236, 1242, 1518, 1548, 1684, 1756
LguI	GCTCTTC	3 cut(s)	590, 803, 995
LmnI	GCTCC	6 cut(s)	445, 738, 761, 1032, 1263, 1485
Lsp1109I	GCAGC	9 cut(s)	43, 412, 444, 771, 1187, 1202, 1530, 1623, 1852
LweI	GCATC	6 cut(s)	388, 570, 788, 980, 1467, 1959
MaeI	CTAG	4 cut(s)	416, 677, 1553, 1974
MaeII	ACGT	8 cut(s)	724, 965, 1104, 1133, 1313, 1532, 1618, 1787
MaeIII	GTNAC	2 cut(s)	1018, 2018
MalI	GATC	8 cut(s)	625, 1121, 1238, 1244, 1520, 1550, 1686, 1758
MbiI	CCGCTC	3 cut(s)	567, 756, 961
MboI	GATC	8 cut(s)	623, 1119, 1236, 1242, 1518, 1548, 1684, 1756
MboII	GAAGA	8 cut(s)	577, 757, 790, 871, 889, 982, 1751, 1860
MflI	RGATCY	3 cut(s)	623, 1119, 1756
MhlI	GDGCHC	7 cut(s)	216, 615, 721, 1260, 1380, 1495, 1777
MlsI	TGGCCA	1 cut(s)	594
MluCI	AATT	6 cut(s)	194, 1887, 1924, 1933, 1941, 2039
MluI	ACGCGT	1 cut(s)	1326
MluNI	TGGCCA	1 cut(s)	594
MlyI	GAGTC	3 cut(s)	1056, 1639, 1997
MmeI	TCCRAC	1 cut(s)	1148
Mox20I	TGGCCA	1 cut(s)	594
MreI	CGCCGGCG	1 cut(s)	980
MroI	TCCGGA	1 cut(s)	671
MroNI	GCCGGC	1 cut(s)	980
MscI	TGGCCA	1 cut(s)	594
MseI	TTAA	3 cut(s)	51, 1932, 2034
MslI	CAYNNNNRTG	2 cut(s)	209, 857
Msp20I	TGGCCA	1 cut(s)	594
MspA1I	CMGCKG	3 cut(s)	457, 523, 620
MspCI	CTTAAG	1 cut(s)	50
MspI	CCGG	5 cut(s)	654, 672, 981, 1044, 1794
MspR9I	CCNGG	4 cut(s)	683, 839, 1706, 1795
Mva1269I	GAATGC	1 cut(s)	638
MvaI	CCWGG	3 cut(s)	683, 839, 1706
NaeI	GCCGGC	1 cut(s)	982
NciI	CCSGG	1 cut(s)	1795
NdeII	GATC	8 cut(s)	623, 1119, 1236, 1242, 1518, 1548, 1684, 1756
NgoMIV	GCCGGC	1 cut(s)	980
NlaIII	CATG	4 cut(s)	691, 814, 1243, 1432
NmeAIII	GCCGAG	4 cut(s)	526, 579, 1003, 1170
NmuCI	GTSAC	2 cut(s)	1018, 2018
NspI	RCATGY	1 cut(s)	814
OliI	CACNNNNGTG	1 cut(s)	857
PaeR7I	CTCGAG	1 cut(s)	608
PagI	TCATGA	2 cut(s)	1239, 1428
PasI	CCCWGGG	1 cut(s)	682
PauI	GCGCGC	2 cut(s)	939, 984
PceI	AGGCCT	1 cut(s)	1557
PciSI	GCTCTTC	3 cut(s)	590, 803, 995
PcsI	WCGNNNNNNNCGW	5 cut(s)	575, 606, 1101, 1466, 1518
PctI	GAATGC	1 cut(s)	638
PdiI	GCCGGC	1 cut(s)	982
PfeI	GAWTC	3 cut(s)	272, 948, 1663
Pfl23II	CGTACG	1 cut(s)	1101
PflFI	GACNNNGTC	2 cut(s)	494, 508
PflMI	CCANNNNNTGG	1 cut(s)	1752
PleI	GAGTC	3 cut(s)	1055, 1639, 1997
PpsI	GAGTC	3 cut(s)	1055, 1639, 1997
Ppu21I	YACGTR	1 cut(s)	1105
PpuMI	RGGWCCY	2 cut(s)	841, 1600
PshAI	GACNNNNGTC	1 cut(s)	1364
PshBI	ATTAAT	2 cut(s)	1932, 2034
Psp124BI	GAGCTC	2 cut(s)	615, 1380
Psp5II	RGGWCCY	2 cut(s)	841, 1600
Psp6I	CCWGG	3 cut(s)	681, 837, 1704
PspFI	CCCAGC	2 cut(s)	1488, 1718
PspGI	CCWGG	3 cut(s)	681, 837, 1704
PspLI	CGTACG	1 cut(s)	1101
PspOMI	GGGCCC	1 cut(s)	1773
PspPPI	RGGWCCY	2 cut(s)	841, 1600
PspXI	VCTCGAGB	1 cut(s)	608
PstNI	CAGNNNCTG	1 cut(s)	1814
PsuI	RGATCY	3 cut(s)	623, 1119, 1756
PsyI	GACNNNGTC	2 cut(s)	494, 508
PteI	GCGCGC	2 cut(s)	939, 984
PvuII	CAGCTG	1 cut(s)	523
RsaI	GTAC	3 cut(s)	135, 830, 1103
RsaNI	GTAC	3 cut(s)	134, 829, 1102
RseI	CAYNNNNRTG	2 cut(s)	209, 857
SacI	GAGCTC	2 cut(s)	615, 1380
SapI	GCTCTTC	3 cut(s)	590, 803, 995
SaqAI	TTAA	3 cut(s)	51, 1932, 2034
Sau3AI	GATC	8 cut(s)	623, 1119, 1236, 1242, 1518, 1548, 1684, 1756
SchI	GAGTC	3 cut(s)	1056, 1639, 1997
ScrFI	CCNGG	4 cut(s)	683, 839, 1706, 1795
SduI	GDGCHC	7 cut(s)	216, 615, 721, 1260, 1380, 1495, 1777
SfaNI	GCATC	6 cut(s)	388, 570, 788, 980, 1467, 1959
Sfr274I	CTCGAG	1 cut(s)	608
SgrAI	CRCCGGYG	1 cut(s)	980
SinI	GGWCC	4 cut(s)	841, 1267, 1600, 1743
SlaI	CTCGAG	1 cut(s)	608
SmiMI	CAYNNNNRTG	2 cut(s)	209, 857
SmlI	CTYRAG	3 cut(s)	50, 608, 1342
SmoI	CTYRAG	3 cut(s)	50, 608, 1342
Sse9I	AATT	6 cut(s)	194, 1887, 1924, 1933, 1941, 2039
SseBI	AGGCCT	1 cut(s)	1557
SspMI	CTAG	4 cut(s)	416, 677, 1553, 1974
SstI	GAGCTC	2 cut(s)	615, 1380
StuI	AGGCCT	1 cut(s)	1557
StyD4I	CCNGG	4 cut(s)	681, 837, 1704, 1793
StyI	CCWWGG	2 cut(s)	589, 1552
TaaI	ACNGT	4 cut(s)	18, 1282, 1588, 1861
TaiI	ACGT	8 cut(s)	727, 968, 1107, 1136, 1316, 1535, 1621, 1790
TaqI	TCGA	6 cut(s)	578, 609, 1289, 1358, 1687, 1873
TaqII	GACCGA	2 cut(s)	285, 559
TasI	AATT	6 cut(s)	194, 1887, 1924, 1933, 1941, 2039
TatI	WGTACW	1 cut(s)	133
TfiI	GAWTC	3 cut(s)	272, 948, 1663
Tru1I	TTAA	3 cut(s)	51, 1932, 2034
Tru9I	TTAA	3 cut(s)	51, 1932, 2034
TscAI	CASTG	2 cut(s)	1182, 1593
TseFI	GTSAC	2 cut(s)	1018, 2018
TseI	GCWGC	9 cut(s)	31, 400, 457, 784, 1190, 1200, 1543, 1611, 1840
Tsp45I	GTSAC	2 cut(s)	1018, 2018
TspDTI	ATGAA	3 cut(s)	345, 1019, 2035
TspGWI	ACGGA	8 cut(s)	55, 110, 328, 652, 748, 1198, 1611, 2015
TspRI	CASTG	2 cut(s)	1182, 1593
Tth111I	GACNNNGTC	2 cut(s)	494, 508
Van91I	CCANNNNNTGG	1 cut(s)	1752
Vha464I	CTTAAG	1 cut(s)	50
VpaK11BI	GGWCC	4 cut(s)	841, 1267, 1600, 1743
VspI	ATTAAT	2 cut(s)	1932, 2034
XagI	CCTNNNNNAGG	1 cut(s)	836
XceI	RCATGY	1 cut(s)	814
XhoI	CTCGAG	1 cut(s)	608
XmaJI	CCTAGG	1 cut(s)	1552
XspI	CTAG	4 cut(s)	416, 677, 1553, 1974
ZraI	GACGTC	2 cut(s)	1314, 1533

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.