Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr4

Orthogroup ID

OG0011869

Physical Location & Seq

Genomic Coordinates Forward (+)

5202416 .. 5204101

Gene Structure 1686 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000016268

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1686 bp

ATGTGCAATCCAAACCCTTCTGTTAATTCGACGACGAAGACCCAGAAAGCAGCGGACCATGGTCAGGTCCATCAACAGCCACAAGCTCATCTCTTTCTGGACCTCTTCTTCTTGTCAGATGAGCCGCCAAAGCTAGTAGTAAAGCAACTACAACAGCCACCATCGACGTCGCAACCACAATTCACAATCAGCAGCAGCAGCAGCCCCCCAATTTCCATCACAGACATAGTCAAAGAGACCAAGTCCCTGTTCAAACTGGCCTTCCCCATACTCATCACAGCTCTCATTCTCTACTCCCGCTCAGGCCTCTCCATGCTCTTCCTCGGCCGCCTCGGCGATTTAGAACTCGCCTCGGGGTCACTAGCCATAGCTTTCGCTAACATCACAGGCTACTCCGTACTCTCCGGCCTAGCCTTGGGTATGGAGCCGCTCTGTTCCCAAGCCTTCGGAGCACAACGTCCGAAGCTTCTGTCAGTCACTCTCCACCGCGCTGTAATCTTCCTCGTAGTTTGTTCGCTCCCCATTTCGCTGCTGTGGTACAATATCTCGACCATTCTTTTGTATCTTCGGCAGGACCCCAATATCACCAACATGGCTCACACCTATCTCATGTTCTCCCTCCCCGACCTTTTCACCAACTCCCTCATTCACCCAATCCGCATTTACCTTCGCGCCCAGGGCATCACCCACCCGCTCACCCTCGCCTCCCTCGCCGGAGCGGTCTTCCATTTCCCCATGAATCTTCTGCTGGTCACCAGGCTCCGCCTCGGCGTCGCCGGCGTCGCCGCGGCCTCCGCGGCCTCCAACTTTTTCGTGCTGGTGTGCCTAGTTGCATACGTCTGGGCGACCAGGCTGCACGTGCCCACGTGGACGGCGCCGAGCCGGGAGTGCTTGACCGGCTGGAAGCCGCTGCTCCGCCTGGCCGCGCCGAGCTGCGTGTCCGTTTGCTTGGAATGGTGGTGGTACGAGATCATGATCGTCTTGTGTGGCCTCCTGGTGGACCCCAAAGCAACCGTCGCCTCGATGGGAGTGCTTATCCAAACGACGTCGTTGATCTACGTGTTCCCGTCGTCTCTCGGGTTCGCCGTGTCCACCCGGGTCGGCAACGAGCTCGGGGCGAACCGGCCCAACCAGGCCAAGCTATCCGCTGTGGTCGCCATTCTCCTGGCCTTCCTCATGGGCCTATCCGCCACGACCTTCGCGTCCGGGATGAGATCAGGCCTGTGGGGCCGGATGTTCACCCACGACGCGGAGATCATACGGCTGACGTCGGCCGCCCTTCCAATCCTAGGGCTGTGCGAGCTCGGCAACTGCCCCCAGACGGTCGCGTGTGGGGTACTCAGGGGAAGCGCGCGTCCGACTACCGCAGCGAACGTGAACCTCAGCGCGTTCTATCTGGTGGGGATGCCCGTGGCGGTTGGGCTCGGGTTCTGGGTCGGAGTCGGGTTCAATGGACTCTGGATCGGGTTGCTGTCGGCCCAGATTTGTTGTGCCGGGCTGATGTTGTATGTTGTTGGGACCACGGACTGGGATTTCCAGGCGAAGAGGGCCCAGGGGCTATCGTGCGCCGGGTGCGATGTGATACTACCTCCTCCTCCTCCTCCTCCTCCTCCAACTAGTAGCGATTCCAAAGGTGAAGAAGAGGAGCCATTGATTATCATTACAGTGCCTTCTTCTTCCCGATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005215 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005768 GO:0005770 GO:0006810 GO:0006855 GO:0007275 GO:0007568 GO:0008150 GO:0009653 GO:0010008 GO:0010015 GO:0010150 GO:0010252 GO:0012505 GO:0015238 GO:0015893 GO:0016020 GO:0022622 GO:0022857 GO:0031090 GO:0031347 GO:0031348 GO:0031410 GO:0031982 GO:0032501 GO:0032502 GO:0040008 GO:0042221 GO:0042493 GO:0042592 GO:0043226 GO:0043227 GO:0043229 GO:0044422 GO:0044424 GO:0044433 GO:0044440 GO:0044444 GO:0044446 GO:0044464 GO:0046620 GO:0048364 GO:0048366 GO:0048367 GO:0048519 GO:0048583 GO:0048585 GO:0048638 GO:0048731 GO:0048827 GO:0048856 GO:0048878 GO:0050789 GO:0050793 GO:0050801 GO:0050896 GO:0051179 GO:0051234 GO:0051239 GO:0055065 GO:0055072 GO:0055076 GO:0055080 GO:0055085 GO:0065007 GO:0065008 GO:0080134 GO:0090693 GO:0097708 GO:0098588 GO:0098771 GO:0098805 GO:0099402 GO:1905392

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

MatE

Protein Analysis

562

Amino Acids

60.24

Weight (kDa)

8.69

Isoelectric Point (pI)

40.8

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
MatE	PF01554	89 - 248	1e-33	MatE
MatE	PF01554	310 - 472	4.8e-33	MatE

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0011869)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G29140
fragaria_vesca	FvH4_1g06290 FvH4_3g02790 FvH4_3g02831
malus_domestica	MD02G1066700.v1.1 MD15G1197200.v1.1
prunus_persica	Prupe.7G218600_v2.0.a1
pyrus_communis	pycom02g05280 pycom15g17620
rosa_chinensis	RchiOBHm_Chr2g0091991
rosa_laevigata	RLG00000016268
rosa_multiflora	Rmu_co8445145.1_g000001 Rmu_sc0000524.1_g000001
rosa_roxburghii	Rroxscaffold_2G00149550
rosa_rugosa	Rorug02G0022200
rosa_samantha	Rh2AG067900 Rh2BG067200 Rh2CG068500
rosa_wichuraiana	Rw2G005320

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1201
AatII	GACGTC	3 cut(s)	170, 1049, 1271
AccB1I	GGYRCC	1 cut(s)	874
AccB7I	CCANNNNNTGG	1 cut(s)	1527
AccBSI	CCGCTC	4 cut(s)	300, 430, 694, 719
AclWI	GGATC	1 cut(s)	1469
AcoI	YGGCCR	3 cut(s)	325, 921, 1272
AcvI	CACGTG	2 cut(s)	859, 867
AcyI	GRCGYC	6 cut(s)	167, 771, 780, 875, 1046, 1268
AfaI	GTAC	4 cut(s)	399, 539, 965, 1338
AfiI	CCNNNNNNNGG	7 cut(s)	64, 415, 997, 1249, 1289, 1321, 1527
AflIII	ACRYGT	1 cut(s)	1059
AgsI	TTSAA	2 cut(s)	253, 1450
AhlI	ACTAGT	1 cut(s)	1616
AjnI	CCWGG	9 cut(s)	675, 755, 848, 918, 993, 1131, 1164, 1536, 1551
AjuI	GAANNNNNNNTTGG	2 cut(s)	233, 265
AluBI	AGCT	9 cut(s)	86, 133, 281, 371, 466, 933, 1111, 1141, 1303
AluI	AGCT	9 cut(s)	86, 133, 281, 371, 466, 933, 1111, 1141, 1303
Alw21I	GWGCWC	3 cut(s)	454, 1113, 1305
Alw26I	GTCTC	2 cut(s)	230, 1077
AlwI	GGATC	1 cut(s)	1469
Ama87I	CYCGRG	5 cut(s)	352, 1076, 1095, 1112, 1424
ApaI	GGGCCC	1 cut(s)	1552
ArsI	GACNNNNNNTTYG	6 cut(s)	455, 487, 541, 573, 999, 1031
AspA2I	CCTAGG	1 cut(s)	1288
AspLEI	GCGC	8 cut(s)	491, 674, 877, 928, 1352, 1354, 1388, 1568
AsuC2I	CCSGG	6 cut(s)	884, 1096, 1097, 1207, 1495, 1570
AsuHPI	GGTGA	8 cut(s)	577, 625, 641, 676, 688, 745, 1231, 1646
AvaI	CYCGRG	5 cut(s)	352, 1076, 1095, 1112, 1424
AvaII	GGWCC	6 cut(s)	55, 67, 100, 574, 1000, 1518
AvrII	CCTAGG	1 cut(s)	1288
BaeGI	GKGCMC	2 cut(s)	864, 1552
BanI	GGYRCC	1 cut(s)	874
BanII	GRGCYC	4 cut(s)	1113, 1305, 1425, 1552
BbrPI	CACGTG	2 cut(s)	859, 867
BbsI	GAAGAC	2 cut(s)	44, 715
Bbv12I	GWGCWC	3 cut(s)	454, 1113, 1305
BbvCI	CCTCAGC	1 cut(s)	1382
BccI	CCATC	4 cut(s)	78, 169, 224, 1018
BceAI	ACGGC	3 cut(s)	888, 1070, 1277
BcgI	CGANNNNNNTGC	6 cut(s)	835, 869, 1012, 1046, 1093, 1127
BciT130I	CCWGG	9 cut(s)	677, 757, 850, 920, 995, 1133, 1166, 1538, 1553
BcnI	CCSGG	6 cut(s)	884, 1096, 1097, 1207, 1495, 1570
BcoDI	GTCTC	2 cut(s)	230, 1077
BcuI	ACTAGT	1 cut(s)	1616
BfaI	CTAG	6 cut(s)	134, 362, 410, 827, 1289, 1617
BfoI	RGCGCY	1 cut(s)	878
BglI	GCCNNNNNGGC	3 cut(s)	333, 797, 1227
BlnI	CCTAGG	1 cut(s)	1288
Bme18I	GGWCC	6 cut(s)	55, 67, 100, 574, 1000, 1518
BmeT110I	CYCGRG	5 cut(s)	352, 1076, 1095, 1112, 1424
BmiI	GGNNCC	9 cut(s)	426, 576, 761, 876, 1002, 1229, 1519, 1550, 1647
BmrI	ACTGGG	1 cut(s)	1537
BmsI	GCATC	2 cut(s)	690, 1395
BmuI	ACTGGG	1 cut(s)	1537
BoxI	GACNNNNGTC	1 cut(s)	60
BpiI	GAAGAC	2 cut(s)	44, 715
Bpu10I	CCTNAGC	2 cut(s)	301, 1382
BpuMI	CCSGG	6 cut(s)	884, 1096, 1097, 1207, 1495, 1570
BsaAI	YACGTR	3 cut(s)	859, 867, 1060
BsaBI	GATNNNNATC	1 cut(s)	974
BsaHI	GRCGYC	6 cut(s)	167, 771, 780, 875, 1046, 1268
BsaI	GGTCTC	1 cut(s)	230
Bsc4I	CCNNNNNNNGG	7 cut(s)	64, 415, 997, 1249, 1289, 1321, 1527
Bse118I	RCCGGY	3 cut(s)	776, 896, 1122
Bse1I	ACTGG	2 cut(s)	261, 1532
Bse8I	GATNNNNATC	1 cut(s)	974
BseBI	CCWGG	9 cut(s)	677, 757, 850, 920, 995, 1133, 1166, 1538, 1553
BseGI	GGATG	3 cut(s)	1215, 1239, 1410
BseJI	GATNNNNATC	1 cut(s)	974
BseLI	CCNNNNNNNGG	7 cut(s)	64, 415, 997, 1249, 1289, 1321, 1527
BseMII	CTCAG	3 cut(s)	315, 1354, 1396
BseNI	ACTGG	2 cut(s)	261, 1532
BsePI	GCGCGC	1 cut(s)	1350
BseRI	GAGGAG	8 cut(s)	1581, 1584, 1587, 1590, 1593, 1596, 1599, 1658
BseSI	GKGCMC	2 cut(s)	864, 1552
BseX3I	CGGCCG	2 cut(s)	325, 1272
BsgI	GTGCAG	1 cut(s)	839
Bsh1285I	CGRYCG	3 cut(s)	328, 1275, 1326
BshNI	GGYRCC	1 cut(s)	874
BsiEI	CGRYCG	3 cut(s)	328, 1275, 1326
BsiHKAI	GWGCWC	3 cut(s)	454, 1113, 1305
BsiHKCI	CYCGRG	5 cut(s)	352, 1076, 1095, 1112, 1424
BslFI	GGGAC	2 cut(s)	229, 1531
BslI	CCNNNNNNNGG	7 cut(s)	64, 415, 997, 1249, 1289, 1321, 1527
BsmAI	GTCTC	2 cut(s)	230, 1077
BsmBI	CGTCTC	1 cut(s)	1077
BsmFI	GGGAC	2 cut(s)	229, 1531
Bso31I	GGTCTC	1 cut(s)	230
BsoBI	CYCGRG	5 cut(s)	352, 1076, 1095, 1112, 1424
Bsp120I	GGGCCC	1 cut(s)	1548
Bsp1286I	GDGCHC	6 cut(s)	454, 864, 1113, 1305, 1425, 1552
Bsp143I	GATC	6 cut(s)	969, 975, 1053, 1214, 1254, 1461
Bsp19I	CCATGG	1 cut(s)	58
BspCNI	CTCAG	3 cut(s)	314, 1353, 1395
BspHI	TCATGA	1 cut(s)	972
BspLI	GGNNCC	9 cut(s)	426, 576, 761, 876, 1002, 1229, 1519, 1550, 1647
BspPI	GGATC	1 cut(s)	1469
BspQI	GCTCTTC	1 cut(s)	323
BspT107I	GGYRCC	1 cut(s)	874
BspTNI	GGTCTC	1 cut(s)	230
BsrBI	CCGCTC	4 cut(s)	300, 430, 694, 719
BsrFI	RCCGGY	3 cut(s)	776, 896, 1122
BsrI	ACTGG	2 cut(s)	261, 1532
BssAI	RCCGGY	3 cut(s)	776, 896, 1122
BssHII	GCGCGC	1 cut(s)	1350
BssMI	GATC	6 cut(s)	969, 975, 1053, 1214, 1254, 1461
BssNI	GRCGYC	6 cut(s)	167, 771, 780, 875, 1046, 1268
BssT1I	CCWWGG	3 cut(s)	58, 414, 1288
Bst2UI	CCWGG	9 cut(s)	677, 757, 850, 920, 995, 1133, 1166, 1538, 1553
Bst4CI	ACNGT	3 cut(s)	1015, 1324, 1666
Bst6I	CTCTTC	4 cut(s)	110, 323, 1538, 1635
BstACI	GRCGYC	6 cut(s)	167, 771, 780, 875, 1046, 1268
BstBAI	YACGTR	3 cut(s)	859, 867, 1060
BstC8I	GCNNGC	3 cut(s)	778, 1301, 1352
BstDEI	CTNAG	3 cut(s)	301, 1340, 1382
BstDSI	CCRYGG	5 cut(s)	58, 786, 795, 1410, 1521
BstEII	GGTNACC	1 cut(s)	751
BstF5I	GGATG	3 cut(s)	1215, 1239, 1410
BstH2I	RGCGCY	1 cut(s)	878
BstHHI	GCGC	8 cut(s)	491, 674, 877, 928, 1352, 1354, 1388, 1568
BstKTI	GATC	6 cut(s)	972, 978, 1056, 1217, 1257, 1464
BstMAI	GTCTC	2 cut(s)	230, 1077
BstMBI	GATC	6 cut(s)	969, 975, 1053, 1214, 1254, 1461
BstMCI	CGRYCG	3 cut(s)	328, 1275, 1326
BstNI	CCWGG	9 cut(s)	677, 757, 850, 920, 995, 1133, 1166, 1538, 1553
BstPAI	GACNNNNGTC	1 cut(s)	60
BstPI	GGTNACC	1 cut(s)	751
BstSLI	GKGCMC	2 cut(s)	864, 1552
BstV2I	GAAGAC	2 cut(s)	44, 715
BstXI	CCANNNNNNTGG	1 cut(s)	1165
BstZI	CGGCCG	2 cut(s)	325, 1272
BtgI	CCRYGG	5 cut(s)	58, 786, 795, 1410, 1521
BtgZI	GCGATG	1 cut(s)	1590
BtsCI	GGATG	3 cut(s)	1215, 1239, 1410
BtsIMutI	CAGTG	1 cut(s)	1671
Cac8I	GCNNGC	3 cut(s)	778, 1301, 1352
CciI	TCATGA	1 cut(s)	972
CfoI	GCGC	8 cut(s)	491, 674, 877, 928, 1352, 1354, 1388, 1568
Cfr10I	RCCGGY	3 cut(s)	776, 896, 1122
Cfr42I	CCGCGG	2 cut(s)	789, 798
Cfr9I	CCCGGG	1 cut(s)	1095
CseI	GACGC	5 cut(s)	760, 769, 1191, 1256, 1343
Csp6I	GTAC	4 cut(s)	398, 538, 964, 1337
CviAII	CATG	7 cut(s)	59, 313, 592, 610, 736, 973, 1177
CviQI	GTAC	4 cut(s)	398, 538, 964, 1337
DdeI	CTNAG	3 cut(s)	301, 1340, 1382
DinI	GGCGCC	1 cut(s)	876
DpnI	GATC	6 cut(s)	971, 977, 1055, 1216, 1256, 1463
DpnII	GATC	6 cut(s)	969, 975, 1053, 1214, 1254, 1461
DrdI	GACNNNNNNGTC	1 cut(s)	1201
DseDI	GACNNNNNNGTC	1 cut(s)	1201
EaeI	YGGCCR	3 cut(s)	325, 921, 1272
EagI	CGGCCG	2 cut(s)	325, 1272
Eam1104I	CTCTTC	4 cut(s)	110, 323, 1538, 1635
EarI	CTCTTC	4 cut(s)	110, 323, 1538, 1635
EciI	GGCGGA	3 cut(s)	752, 905, 1177
Ecl136II	GAGCTC	2 cut(s)	1111, 1303
EclXI	CGGCCG	2 cut(s)	325, 1272
Eco130I	CCWWGG	3 cut(s)	58, 414, 1288
Eco147I	AGGCCT	2 cut(s)	306, 1221
Eco24I	GRGCYC	4 cut(s)	1113, 1305, 1425, 1552
Eco31I	GGTCTC	1 cut(s)	230
Eco47I	GGWCC	6 cut(s)	55, 67, 100, 574, 1000, 1518
Eco52I	CGGCCG	2 cut(s)	325, 1272
Eco53kI	GAGCTC	2 cut(s)	1111, 1303
Eco72I	CACGTG	2 cut(s)	859, 867
Eco88I	CYCGRG	5 cut(s)	352, 1076, 1095, 1112, 1424
Eco91I	GGTNACC	1 cut(s)	751
EcoICRI	GAGCTC	2 cut(s)	1111, 1303
EcoO109I	RGGNCCY	2 cut(s)	574, 1548
EcoO65I	GGTNACC	1 cut(s)	751
EcoRII	CCWGG	9 cut(s)	675, 755, 848, 918, 993, 1131, 1164, 1536, 1551
EcoT14I	CCWWGG	3 cut(s)	58, 414, 1288
EcoT38I	GRGCYC	4 cut(s)	1113, 1305, 1425, 1552
EgeI	GGCGCC	1 cut(s)	876
EheI	GGCGCC	1 cut(s)	876
ErhI	CCWWGG	3 cut(s)	58, 414, 1288
Esp3I	CGTCTC	1 cut(s)	1077
FaeI	CATG	7 cut(s)	62, 316, 595, 613, 739, 976, 1180
FaqI	GGGAC	2 cut(s)	229, 1531
FatI	CATG	7 cut(s)	58, 312, 591, 609, 735, 972, 1176
FauI	CCCGC	2 cut(s)	305, 699
FokI	GGATG	3 cut(s)	1222, 1246, 1417
FriOI	GRGCYC	4 cut(s)	1113, 1305, 1425, 1552
FspBI	CTAG	6 cut(s)	134, 362, 410, 827, 1289, 1617
GlaI	GCGC	8 cut(s)	490, 673, 876, 927, 1351, 1353, 1387, 1567
HaeII	RGCGCY	1 cut(s)	878
HgaI	GACGC	5 cut(s)	760, 769, 1191, 1256, 1343
HhaI	GCGC	8 cut(s)	491, 674, 877, 928, 1352, 1354, 1388, 1568
Hin1I	GRCGYC	6 cut(s)	167, 771, 780, 875, 1046, 1268
Hin1II	CATG	7 cut(s)	62, 316, 595, 613, 739, 976, 1180
Hin6I	GCGC	8 cut(s)	489, 672, 875, 926, 1350, 1352, 1386, 1566
HinP1I	GCGC	8 cut(s)	489, 672, 875, 926, 1350, 1352, 1386, 1566
HindIII	AAGCTT	1 cut(s)	464
HinfI	GANTC	4 cut(s)	739, 1440, 1455, 1625
HphI	GGTGA	8 cut(s)	577, 625, 641, 676, 688, 745, 1231, 1646
Hpy166II	GTNNAC	5 cut(s)	870, 1000, 1092, 1239, 1378
Hpy188I	TCNGA	5 cut(s)	118, 449, 462, 1359, 1439
Hpy188III	TCNNGA	5 cut(s)	98, 547, 973, 1459, 1680
Hpy8I	GTNNAC	5 cut(s)	870, 1000, 1092, 1239, 1378
HpyAV	CCTTC	8 cut(s)	27, 271, 454, 677, 1180, 1207, 1289, 1680
HpyCH4III	ACNGT	3 cut(s)	1015, 1324, 1666
HpyCH4IV	ACGT	9 cut(s)	167, 457, 837, 858, 866, 1046, 1059, 1268, 1374
HpyCH4V	TGCA	3 cut(s)	6, 833, 856
HpyF3I	CTNAG	3 cut(s)	301, 1340, 1382
HpySE526I	ACGT	9 cut(s)	167, 457, 837, 858, 866, 1046, 1059, 1268, 1374
Hsp92I	GRCGYC	6 cut(s)	167, 771, 780, 875, 1046, 1268
Hsp92II	CATG	7 cut(s)	62, 316, 595, 613, 739, 976, 1180
HspAI	GCGC	8 cut(s)	489, 672, 875, 926, 1350, 1352, 1386, 1566
KasI	GGCGCC	1 cut(s)	874
KroI	GCCGGC	1 cut(s)	776
KroNI	GCCGGC	1 cut(s)	778
KspI	CCGCGG	2 cut(s)	789, 798
Kzo9I	GATC	6 cut(s)	969, 975, 1053, 1214, 1254, 1461
LguI	GCTCTTC	1 cut(s)	323
LmnI	GCTCC	7 cut(s)	424, 449, 522, 716, 765, 918, 1645
LweI	GCATC	2 cut(s)	690, 1395
MaeI	CTAG	6 cut(s)	134, 362, 410, 827, 1289, 1617
MaeII	ACGT	9 cut(s)	167, 457, 837, 858, 866, 1046, 1059, 1268, 1374
MaeIII	GTNAC	3 cut(s)	357, 475, 751
MalI	GATC	6 cut(s)	971, 977, 1055, 1216, 1256, 1463
MbiI	CCGCTC	4 cut(s)	300, 430, 694, 719
MboI	GATC	6 cut(s)	969, 975, 1053, 1214, 1254, 1461
MhlI	GDGCHC	6 cut(s)	454, 864, 1113, 1305, 1425, 1552
MluCI	AATT	3 cut(s)	25, 179, 210
Mly113I	GGCGCC	1 cut(s)	875
MlyI	GAGTC	2 cut(s)	1449, 1449
MmeI	TCCRAC	4 cut(s)	828, 1382, 1417, 1637
MreI	CGCCGGCG	1 cut(s)	776
MroNI	GCCGGC	1 cut(s)	776
MseI	TTAA	1 cut(s)	24
MslI	CAYNNNNRTG	2 cut(s)	590, 1664
MspA1I	CMGCKG	5 cut(s)	53, 788, 797, 910, 1148
MvaI	CCWGG	9 cut(s)	677, 757, 850, 920, 995, 1133, 1166, 1538, 1553
NaeI	GCCGGC	1 cut(s)	778
NarI	GGCGCC	1 cut(s)	875
NciI	CCSGG	6 cut(s)	884, 1096, 1097, 1207, 1495, 1570
NcoI	CCATGG	1 cut(s)	58
NdeII	GATC	6 cut(s)	969, 975, 1053, 1214, 1254, 1461
NgoMIV	GCCGGC	1 cut(s)	776
NlaIII	CATG	7 cut(s)	62, 316, 595, 613, 739, 976, 1180
NlaIV	GGNNCC	9 cut(s)	426, 576, 761, 876, 1002, 1229, 1519, 1550, 1647
NmeAIII	GCCGAG	6 cut(s)	303, 312, 747, 903, 954, 1284
NmuCI	GTSAC	3 cut(s)	357, 475, 751
PagI	TCATGA	1 cut(s)	972
PasI	CCCWGGG	2 cut(s)	676, 1552
PauI	GCGCGC	1 cut(s)	1350
PceI	AGGCCT	2 cut(s)	306, 1221
PciSI	GCTCTTC	1 cut(s)	323
PcsI	WCGNNNNNNNCGW	2 cut(s)	1083, 1199
PdiI	GCCGGC	1 cut(s)	778
PfeI	GAWTC	2 cut(s)	739, 1625
PflFI	GACNNNGTC	2 cut(s)	227, 241
PflMI	CCANNNNNTGG	1 cut(s)	1527
PfoI	TCCNGGA	1 cut(s)	1205
PleI	GAGTC	2 cut(s)	1448, 1449
PluTI	GGCGCC	1 cut(s)	878
PmaCI	CACGTG	2 cut(s)	859, 867
PmlI	CACGTG	2 cut(s)	859, 867
PpsI	GAGTC	2 cut(s)	1448, 1449
Ppu21I	YACGTR	3 cut(s)	859, 867, 1060
PpuMI	RGGWCCY	1 cut(s)	574
PshAI	GACNNNNGTC	1 cut(s)	60
Psp124BI	GAGCTC	2 cut(s)	1113, 1305
Psp5II	RGGWCCY	1 cut(s)	574
Psp6I	CCWGG	9 cut(s)	675, 755, 848, 918, 993, 1131, 1164, 1536, 1551
PspCI	CACGTG	2 cut(s)	859, 867
PspEI	GGTNACC	1 cut(s)	751
PspGI	CCWGG	9 cut(s)	675, 755, 848, 918, 993, 1131, 1164, 1536, 1551
PspN4I	GGNNCC	9 cut(s)	426, 576, 761, 876, 1002, 1229, 1519, 1550, 1647
PspOMI	GGGCCC	1 cut(s)	1548
PspPPI	RGGWCCY	1 cut(s)	574
PsyI	GACNNNGTC	2 cut(s)	227, 241
PteI	GCGCGC	1 cut(s)	1350
RsaI	GTAC	4 cut(s)	399, 539, 965, 1338
RsaNI	GTAC	4 cut(s)	398, 538, 964, 1337
RseI	CAYNNNNRTG	2 cut(s)	590, 1664
SacI	GAGCTC	2 cut(s)	1113, 1305
SacII	CCGCGG	2 cut(s)	789, 798
SapI	GCTCTTC	1 cut(s)	323
SaqAI	TTAA	1 cut(s)	24
Sau3AI	GATC	6 cut(s)	969, 975, 1053, 1214, 1254, 1461
SchI	GAGTC	2 cut(s)	1449, 1449
SduI	GDGCHC	6 cut(s)	454, 864, 1113, 1305, 1425, 1552
SfaNI	GCATC	2 cut(s)	690, 1395
SfiI	GGCCNNNNNGGCC	2 cut(s)	797, 1227
SfoI	GGCGCC	1 cut(s)	876
Sfr303I	CCGCGG	2 cut(s)	789, 798
SgrAI	CRCCGGYG	1 cut(s)	776
SgrBI	CCGCGG	2 cut(s)	789, 798
SinI	GGWCC	6 cut(s)	55, 67, 100, 574, 1000, 1518
SmaI	CCCGGG	1 cut(s)	1097
SmiMI	CAYNNNNRTG	2 cut(s)	590, 1664
SpeI	ACTAGT	1 cut(s)	1616
Sse9I	AATT	3 cut(s)	25, 179, 210
SseBI	AGGCCT	2 cut(s)	306, 1221
SspDI	GGCGCC	1 cut(s)	874
SspMI	CTAG	6 cut(s)	134, 362, 410, 827, 1289, 1617
SstI	GAGCTC	2 cut(s)	1113, 1305
StuI	AGGCCT	2 cut(s)	306, 1221
StyI	CCWWGG	3 cut(s)	58, 414, 1288
TaaI	ACNGT	3 cut(s)	1015, 1324, 1666
TaiI	ACGT	9 cut(s)	170, 460, 840, 861, 869, 1049, 1062, 1271, 1377
TaqI	TCGA	4 cut(s)	29, 164, 548, 1022
TasI	AATT	3 cut(s)	25, 179, 210
TauI	GCSGC	9 cut(s)	127, 330, 430, 788, 791, 800, 910, 926, 1277
TfiI	GAWTC	2 cut(s)	739, 1625
Tru1I	TTAA	1 cut(s)	24
Tru9I	TTAA	1 cut(s)	24
TscAI	CASTG	1 cut(s)	1671
TseFI	GTSAC	3 cut(s)	357, 475, 751
Tsp45I	GTSAC	3 cut(s)	357, 475, 751
TspDTI	ATGAA	1 cut(s)	752
TspGWI	ACGGA	3 cut(s)	385, 931, 1538
TspMI	CCCGGG	1 cut(s)	1095
TspRI	CASTG	1 cut(s)	1671
Tth111I	GACNNNGTC	2 cut(s)	227, 241
Van91I	CCANNNNNTGG	1 cut(s)	1527
VpaK11BI	GGWCC	6 cut(s)	55, 67, 100, 574, 1000, 1518
XmaI	CCCGGG	1 cut(s)	1095
XmaJI	CCTAGG	1 cut(s)	1288
XspI	CTAG	6 cut(s)	134, 362, 410, 827, 1289, 1617
ZraI	GACGTC	3 cut(s)	168, 1047, 1269

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.