Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_co8445145.1

Orthogroup ID

OG0011869

Physical Location & Seq

Genomic Coordinates Reverse (-)

2 .. 1578

Gene Structure 1577 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_co8445145.1_g000001.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1577 bp

atgtgtaatccaaacccttctgttaattccagcaagacccagaaagcagcggagcaggtgcatcaacagccacagcaaggtcatctgtttctggacctcttcttcttgtcagatgagccgccaaagctagtagtaaagcaaccacaacaggcaccatcgtcgtcgacaaggagcaggagcagccccccaatttgcatcacagacgtagtcaaagagaccaagtccctgttcaaactggccttccccatactcatcacagctctcattctctactcccgctcagccctgtccatgctgttcctgggccgcctgggcgatttagaactcgcctcggggtcactggccatagcctttgccaacatcacaggctactccgtgctctccggcctagccttgggtatggagccgctgtgttcccaagccttcggagcacaacgtcccaagcttctgtcagtcactctccaccgcgctgtcatcttcctcgtagtttgttcactccccatttcgctgctgtggtacaatatctcgaccattcttttgtatcttcgccaggaccccaacatcactaacatggctcacacctatctcatgttctccctccctgaccttttcaccaactccctcattcacccaatccgcatttacctccgcgcccagggcatcacccaccccctcaccctcgcctccctcgccggagccgtcttccatttccccgtcaatctcctgctcgtcaccaggctccgcctcggcgtcgccggcgtcgcggccgcctccgccgcctccaacttcttcgtgctgctctgcctagttgcatacgtctgggccaccaggctgcacgtgcccacgtggacggcgccgagccgcgagtgcttgaccggctggaagccgctgctccggctggccgcgccgagctgcgtctccgtttgcttggaatggtggtggtacgagatcatgatcgtcttgtgtggcctcctggtggaccccaaagcaaccgtcgcctcgatgggagtgcttatccaaacgacgtcgttgatctacgtgttcccgtcctctctcgggttcgccgtgtccacccgggtcggcaacgagctcggggcgaaccggcccaaccgggccaggctatccgctgtggtcgccattctcctggccttcctcatgggcctctccgccaccaccttcgcgtccgggatgagatcagggctgtggggccggatgttcacccacgacgcggagatcatacggctgacgtctgccgcgcttccaatcctagggctctgcgagctcggcaactgcccgcagacggtcgcgtgtggtgtactcaggggaagcgcgcgtccgactaccgcagccaacgtgaacctcagcgcgttctatctggtggggatgcccgtggcggttgggctcgggttctgggtcggagtcgggttcaatggactctggatcgggttgctgtcggcccagatttgttgtgccgggctgatgttgtatgttgttgggaccacggactgggatttccaggcgaaaagggcccaggggctagcgtgcgccgggtgcgatgtgatactacctcctcctcc

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005215 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005768 GO:0005770 GO:0006810 GO:0006855 GO:0007275 GO:0007568 GO:0008150 GO:0009653 GO:0010008 GO:0010015 GO:0010150 GO:0010252 GO:0012505 GO:0015238 GO:0015893 GO:0016020 GO:0022622 GO:0022857 GO:0031090 GO:0031347 GO:0031348 GO:0031410 GO:0031982 GO:0032501 GO:0032502 GO:0040008 GO:0042221 GO:0042493 GO:0042592 GO:0043226 GO:0043227 GO:0043229 GO:0044422 GO:0044424 GO:0044433 GO:0044440 GO:0044444 GO:0044446 GO:0044464 GO:0046620 GO:0048364 GO:0048366 GO:0048367 GO:0048519 GO:0048583 GO:0048585 GO:0048638 GO:0048731 GO:0048827 GO:0048856 GO:0048878 GO:0050789 GO:0050793 GO:0050801 GO:0050896 GO:0051179 GO:0051234 GO:0051239 GO:0055065 GO:0055072 GO:0055076 GO:0055080 GO:0055085 GO:0065007 GO:0065008 GO:0080134 GO:0090693 GO:0097708 GO:0098588 GO:0098771 GO:0098805 GO:0099402 GO:1905392

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

MatE

Protein Analysis

526

Amino Acids

56.63

Weight (kDa)

9.14

Isoelectric Point (pI)

39.81

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0011869)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G29140
fragaria_vesca	FvH4_1g06290 FvH4_3g02790 FvH4_3g02831
malus_domestica	MD02G1066700.v1.1 MD15G1197200.v1.1
prunus_persica	Prupe.7G218600_v2.0.a1
pyrus_communis	pycom02g05280 pycom15g17620
rosa_chinensis	RchiOBHm_Chr2g0091991
rosa_laevigata	RLG00000016268
rosa_multiflora	Rmu_co8445145.1_g000001 Rmu_sc0000524.1_g000001
rosa_roxburghii	Rroxscaffold_2G00149550
rosa_rugosa	Rorug02G0022200
rosa_samantha	Rh2AG067900 Rh2BG067200 Rh2CG068500
rosa_wichuraiana	Rw2G005320

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	46
AatII	GACGTC	2 cut(s)	1028, 1250
Acc36I	ACCTGC	1 cut(s)	46
AccB1I	GGYRCC	2 cut(s)	151, 853
AccB7I	CCANNNNNTGG	1 cut(s)	1506
AccBSI	CCGCTC	1 cut(s)	279
AccI	GTMKAC	1 cut(s)	164
AclWI	GGATC	1 cut(s)	1448
AcoI	YGGCCR	3 cut(s)	342, 765, 900
AcvI	CACGTG	2 cut(s)	838, 846
AcyI	GRCGYC	5 cut(s)	750, 759, 854, 1025, 1247
AfaI	GTAC	3 cut(s)	518, 944, 1317
AfiI	CCNNNNNNNGG	9 cut(s)	77, 394, 655, 976, 1056, 1228, 1268, 1300, 1506
AflIII	ACRYGT	1 cut(s)	1038
AgsI	TTSAA	2 cut(s)	232, 1429
AjuI	GAANNNNNNNTTGG	2 cut(s)	212, 244
AluBI	AGCT	6 cut(s)	127, 260, 445, 912, 1090, 1282
AluI	AGCT	6 cut(s)	127, 260, 445, 912, 1090, 1282
Alw21I	GWGCWC	4 cut(s)	381, 433, 1092, 1284
Alw26I	GTCTC	2 cut(s)	209, 922
AlwI	GGATC	1 cut(s)	1448
Ama87I	CYCGRG	5 cut(s)	331, 1055, 1074, 1091, 1403
ApaI	GGGCCC	1 cut(s)	1531
ApeKI	GCWGC	8 cut(s)	47, 180, 508, 796, 832, 889, 912, 1346
ArsI	GACNNNNNNTTYG	4 cut(s)	520, 552, 978, 1010
AspA2I	CCTAGG	1 cut(s)	1267
AspLEI	GCGC	9 cut(s)	470, 653, 856, 907, 1258, 1331, 1333, 1367, 1547
AsuC2I	CCSGG	6 cut(s)	1075, 1076, 1112, 1186, 1474, 1549
AsuHPI	GGTGA	6 cut(s)	604, 620, 655, 667, 724, 1210
AsuNHI	GCTAGC	1 cut(s)	1537
AvaI	CYCGRG	5 cut(s)	331, 1055, 1074, 1091, 1403
AvaII	GGWCC	4 cut(s)	94, 553, 979, 1497
AvrII	CCTAGG	1 cut(s)	1267
BaeGI	GKGCMC	2 cut(s)	843, 1531
BalI	TGGCCA	1 cut(s)	344
BanI	GGYRCC	2 cut(s)	151, 853
BanII	GRGCYC	5 cut(s)	1092, 1275, 1284, 1404, 1531
BbrPI	CACGTG	2 cut(s)	838, 846
BbsI	GAAGAC	1 cut(s)	694
Bbv12I	GWGCWC	4 cut(s)	381, 433, 1092, 1284
BbvCI	CCTCAGC	1 cut(s)	1361
BbvI	GCAGC	8 cut(s)	59, 192, 495, 783, 819, 876, 899, 1358
BccI	CCATC	2 cut(s)	163, 997
BceAI	ACGGC	4 cut(s)	683, 867, 1049, 1256
BcgI	CGANNNNNNTGC	6 cut(s)	141, 175, 991, 1025, 1072, 1106
BcnI	CCSGG	6 cut(s)	1075, 1076, 1112, 1186, 1474, 1549
BcoDI	GTCTC	2 cut(s)	209, 922
BfaI	CTAG	5 cut(s)	128, 389, 806, 1268, 1538
BfoI	RGCGCY	1 cut(s)	857
BfuAI	ACCTGC	1 cut(s)	46
BglI	GCCNNNNNGGC	1 cut(s)	312
BlnI	CCTAGG	1 cut(s)	1267
BlpI	GCTNAGC	1 cut(s)	280
Bme18I	GGWCC	4 cut(s)	94, 553, 979, 1497
BmeT110I	CYCGRG	5 cut(s)	331, 1055, 1074, 1091, 1403
BmrI	ACTGGG	1 cut(s)	1516
BmsI	GCATC	4 cut(s)	70, 204, 669, 1374
BmtI	GCTAGC	1 cut(s)	1541
BmuI	ACTGGG	1 cut(s)	1516
BpiI	GAAGAC	1 cut(s)	694
Bpu10I	CCTNAGC	1 cut(s)	1361
Bpu1102I	GCTNAGC	1 cut(s)	280
BpuMI	CCSGG	6 cut(s)	1075, 1076, 1112, 1186, 1474, 1549
BsaAI	YACGTR	3 cut(s)	838, 846, 1039
BsaBI	GATNNNNATC	1 cut(s)	953
BsaHI	GRCGYC	5 cut(s)	750, 759, 854, 1025, 1247
BsaI	GGTCTC	1 cut(s)	209
BsaXI	ACNNNNNCTCC	2 cut(s)	395, 425
Bsc4I	CCNNNNNNNGG	9 cut(s)	77, 394, 655, 976, 1056, 1228, 1268, 1300, 1506
Bse118I	RCCGGY	3 cut(s)	755, 875, 1101
Bse1I	ACTGG	3 cut(s)	240, 345, 1511
Bse8I	GATNNNNATC	1 cut(s)	953
BseGI	GGATG	3 cut(s)	1194, 1218, 1389
BseJI	GATNNNNATC	1 cut(s)	953
BseLI	CCNNNNNNNGG	9 cut(s)	77, 394, 655, 976, 1056, 1228, 1268, 1300, 1506
BseMII	CTCAG	3 cut(s)	294, 1333, 1375
BseNI	ACTGG	3 cut(s)	240, 345, 1511
BsePI	GCGCGC	1 cut(s)	1329
BseRI	GAGGAG	2 cut(s)	1560, 1563
BseSI	GKGCMC	2 cut(s)	843, 1531
BseX3I	CGGCCG	1 cut(s)	765
BseXI	GCAGC	8 cut(s)	59, 192, 495, 783, 819, 876, 899, 1358
BsgI	GTGCAG	1 cut(s)	818
Bsh1285I	CGRYCG	2 cut(s)	768, 1305
BshNI	GGYRCC	2 cut(s)	151, 853
BsiEI	CGRYCG	2 cut(s)	768, 1305
BsiHKAI	GWGCWC	4 cut(s)	381, 433, 1092, 1284
BsiHKCI	CYCGRG	5 cut(s)	331, 1055, 1074, 1091, 1403
BslFI	GGGAC	3 cut(s)	208, 423, 1510
BslI	CCNNNNNNNGG	9 cut(s)	77, 394, 655, 976, 1056, 1228, 1268, 1300, 1506
BsmAI	GTCTC	2 cut(s)	209, 922
BsmBI	CGTCTC	1 cut(s)	922
BsmFI	GGGAC	3 cut(s)	208, 423, 1510
Bso31I	GGTCTC	1 cut(s)	209
BsoBI	CYCGRG	5 cut(s)	331, 1055, 1074, 1091, 1403
Bsp120I	GGGCCC	1 cut(s)	1527
Bsp1286I	GDGCHC	8 cut(s)	381, 433, 843, 1092, 1275, 1284, 1404, 1531
Bsp143I	GATC	6 cut(s)	948, 954, 1032, 1193, 1233, 1440
Bsp1720I	GCTNAGC	1 cut(s)	280
BspCNI	CTCAG	3 cut(s)	293, 1332, 1374
BspHI	TCATGA	1 cut(s)	951
BspMI	ACCTGC	1 cut(s)	46
BspOI	GCTAGC	1 cut(s)	1541
BspPI	GGATC	1 cut(s)	1448
BspT107I	GGYRCC	2 cut(s)	151, 853
BspTNI	GGTCTC	1 cut(s)	209
BsrBI	CCGCTC	1 cut(s)	279
BsrFI	RCCGGY	3 cut(s)	755, 875, 1101
BsrI	ACTGG	3 cut(s)	240, 345, 1511
BssAI	RCCGGY	3 cut(s)	755, 875, 1101
BssHII	GCGCGC	1 cut(s)	1329
BssMI	GATC	6 cut(s)	948, 954, 1032, 1193, 1233, 1440
BssNI	GRCGYC	5 cut(s)	750, 759, 854, 1025, 1247
BssT1I	CCWWGG	2 cut(s)	393, 1267
Bst4CI	ACNGT	2 cut(s)	994, 1303
Bst6I	CTCTTC	1 cut(s)	104
BstACI	GRCGYC	5 cut(s)	750, 759, 854, 1025, 1247
BstBAI	YACGTR	3 cut(s)	838, 846, 1039
BstC8I	GCNNGC	7 cut(s)	757, 900, 1280, 1295, 1331, 1539, 1543
BstDEI	CTNAG	3 cut(s)	280, 1319, 1361
BstDSI	CCRYGG	2 cut(s)	1389, 1500
BstF5I	GGATG	3 cut(s)	1194, 1218, 1389
BstH2I	RGCGCY	1 cut(s)	857
BstHHI	GCGC	9 cut(s)	470, 653, 856, 907, 1258, 1331, 1333, 1367, 1547
BstKTI	GATC	6 cut(s)	951, 957, 1035, 1196, 1236, 1443
BstMAI	GTCTC	2 cut(s)	209, 922
BstMBI	GATC	6 cut(s)	948, 954, 1032, 1193, 1233, 1440
BstMCI	CGRYCG	2 cut(s)	768, 1305
BstSLI	GKGCMC	2 cut(s)	843, 1531
BstV1I	GCAGC	8 cut(s)	59, 192, 495, 783, 819, 876, 899, 1358
BstV2I	GAAGAC	1 cut(s)	694
BstXI	CCANNNNNNTGG	1 cut(s)	1144
BstZI	CGGCCG	1 cut(s)	765
BtgI	CCRYGG	2 cut(s)	1389, 1500
BtgZI	GCGATG	1 cut(s)	1569
BtsCI	GGATG	3 cut(s)	1194, 1218, 1389
BtsIMutI	CAGTG	1 cut(s)	338
BveI	ACCTGC	1 cut(s)	46
Cac8I	GCNNGC	7 cut(s)	757, 900, 1280, 1295, 1331, 1539, 1543
CciI	TCATGA	1 cut(s)	951
CciNI	GCGGCCGC	1 cut(s)	765
CfoI	GCGC	9 cut(s)	470, 653, 856, 907, 1258, 1331, 1333, 1367, 1547
Cfr10I	RCCGGY	3 cut(s)	755, 875, 1101
Cfr9I	CCCGGG	1 cut(s)	1074
CseI	GACGC	6 cut(s)	739, 748, 904, 1170, 1235, 1322
Csp6I	GTAC	3 cut(s)	517, 943, 1316
CviAII	CATG	5 cut(s)	292, 571, 589, 952, 1156
CviQI	GTAC	3 cut(s)	517, 943, 1316
DdeI	CTNAG	3 cut(s)	280, 1319, 1361
DinI	GGCGCC	1 cut(s)	855
DpnI	GATC	6 cut(s)	950, 956, 1034, 1195, 1235, 1442
DpnII	GATC	6 cut(s)	948, 954, 1032, 1193, 1233, 1440
EaeI	YGGCCR	3 cut(s)	342, 765, 900
EagI	CGGCCG	1 cut(s)	765
Eam1104I	CTCTTC	1 cut(s)	104
EarI	CTCTTC	1 cut(s)	104
EciI	GGCGGA	3 cut(s)	731, 763, 1156
Ecl136II	GAGCTC	2 cut(s)	1090, 1282
EclXI	CGGCCG	1 cut(s)	765
Eco130I	CCWWGG	2 cut(s)	393, 1267
Eco24I	GRGCYC	5 cut(s)	1092, 1275, 1284, 1404, 1531
Eco31I	GGTCTC	1 cut(s)	209
Eco47I	GGWCC	4 cut(s)	94, 553, 979, 1497
Eco52I	CGGCCG	1 cut(s)	765
Eco53kI	GAGCTC	2 cut(s)	1090, 1282
Eco72I	CACGTG	2 cut(s)	838, 846
Eco88I	CYCGRG	5 cut(s)	331, 1055, 1074, 1091, 1403
EcoICRI	GAGCTC	2 cut(s)	1090, 1282
EcoO109I	RGGNCCY	2 cut(s)	553, 1527
EcoT14I	CCWWGG	2 cut(s)	393, 1267
EcoT38I	GRGCYC	5 cut(s)	1092, 1275, 1284, 1404, 1531
EgeI	GGCGCC	1 cut(s)	855
EheI	GGCGCC	1 cut(s)	855
ErhI	CCWWGG	2 cut(s)	393, 1267
Esp3I	CGTCTC	1 cut(s)	922
FaeI	CATG	5 cut(s)	295, 574, 592, 955, 1159
FaqI	GGGAC	3 cut(s)	208, 423, 1510
FatI	CATG	5 cut(s)	291, 570, 588, 951, 1155
FauI	CCCGC	2 cut(s)	284, 1302
FblI	GTMKAC	1 cut(s)	164
FokI	GGATG	3 cut(s)	1201, 1225, 1396
FriOI	GRGCYC	5 cut(s)	1092, 1275, 1284, 1404, 1531
FspBI	CTAG	5 cut(s)	128, 389, 806, 1268, 1538
GlaI	GCGC	9 cut(s)	469, 652, 855, 906, 1257, 1330, 1332, 1366, 1546
HaeII	RGCGCY	1 cut(s)	857
HgaI	GACGC	6 cut(s)	739, 748, 904, 1170, 1235, 1322
HhaI	GCGC	9 cut(s)	470, 653, 856, 907, 1258, 1331, 1333, 1367, 1547
Hin1I	GRCGYC	5 cut(s)	750, 759, 854, 1025, 1247
Hin1II	CATG	5 cut(s)	295, 574, 592, 955, 1159
Hin6I	GCGC	9 cut(s)	468, 651, 854, 905, 1256, 1329, 1331, 1365, 1545
HinP1I	GCGC	9 cut(s)	468, 651, 854, 905, 1256, 1329, 1331, 1365, 1545
HincII	GTYRAC	1 cut(s)	165
HindII	GTYRAC	1 cut(s)	165
HindIII	AAGCTT	1 cut(s)	443
HinfI	GANTC	2 cut(s)	1419, 1434
HphI	GGTGA	6 cut(s)	604, 620, 655, 667, 724, 1210
Hpy166II	GTNNAC	8 cut(s)	165, 494, 849, 979, 1071, 1218, 1316, 1357
Hpy188I	TCNGA	4 cut(s)	112, 428, 1338, 1418
Hpy188III	TCNNGA	4 cut(s)	92, 526, 952, 1438
Hpy8I	GTNNAC	8 cut(s)	165, 494, 849, 979, 1071, 1218, 1316, 1357
Hpy99I	CGWCG	8 cut(s)	163, 166, 755, 764, 998, 1027, 1030, 1229
HpyAV	CCTTC	5 cut(s)	27, 250, 433, 1159, 1186
HpyCH4III	ACNGT	2 cut(s)	994, 1303
HpyCH4IV	ACGT	9 cut(s)	204, 436, 816, 837, 845, 1025, 1038, 1247, 1353
HpyCH4V	TGCA	4 cut(s)	61, 195, 812, 835
HpyF3I	CTNAG	3 cut(s)	280, 1319, 1361
HpySE526I	ACGT	9 cut(s)	204, 436, 816, 837, 845, 1025, 1038, 1247, 1353
Hsp92I	GRCGYC	5 cut(s)	750, 759, 854, 1025, 1247
Hsp92II	CATG	5 cut(s)	295, 574, 592, 955, 1159
HspAI	GCGC	9 cut(s)	468, 651, 854, 905, 1256, 1329, 1331, 1365, 1545
KasI	GGCGCC	1 cut(s)	853
KroI	GCCGGC	1 cut(s)	755
KroNI	GCCGGC	1 cut(s)	757
Kzo9I	GATC	6 cut(s)	948, 954, 1032, 1193, 1233, 1440
LmnI	GCTCC	8 cut(s)	52, 171, 177, 403, 428, 695, 744, 897
Lsp1109I	GCAGC	8 cut(s)	59, 192, 495, 783, 819, 876, 899, 1358
LweI	GCATC	4 cut(s)	70, 204, 669, 1374
MaeI	CTAG	5 cut(s)	128, 389, 806, 1268, 1538
MaeII	ACGT	9 cut(s)	204, 436, 816, 837, 845, 1025, 1038, 1247, 1353
MaeIII	GTNAC	3 cut(s)	336, 454, 730
MalI	GATC	6 cut(s)	950, 956, 1034, 1195, 1235, 1442
MbiI	CCGCTC	1 cut(s)	279
MboI	GATC	6 cut(s)	948, 954, 1032, 1193, 1233, 1440
MboII	GAAGA	6 cut(s)	91, 94, 469, 536, 694, 781
MhlI	GDGCHC	8 cut(s)	381, 433, 843, 1092, 1275, 1284, 1404, 1531
MlsI	TGGCCA	1 cut(s)	344
MluCI	AATT	2 cut(s)	25, 189
MluNI	TGGCCA	1 cut(s)	344
Mly113I	GGCGCC	1 cut(s)	854
MlyI	GAGTC	2 cut(s)	1428, 1428
MmeI	TCCRAC	3 cut(s)	807, 1361, 1396
Mox20I	TGGCCA	1 cut(s)	344
MreI	CGCCGGCG	1 cut(s)	755
MroNI	GCCGGC	1 cut(s)	755
MscI	TGGCCA	1 cut(s)	344
MseI	TTAA	1 cut(s)	24
MslI	CAYNNNNRTG	1 cut(s)	569
Msp20I	TGGCCA	1 cut(s)	344
MspA1I	CMGCKG	4 cut(s)	50, 409, 889, 1127
NaeI	GCCGGC	1 cut(s)	757
NarI	GGCGCC	1 cut(s)	854
NciI	CCSGG	6 cut(s)	1075, 1076, 1112, 1186, 1474, 1549
NdeII	GATC	6 cut(s)	948, 954, 1032, 1193, 1233, 1440
NgoMIV	GCCGGC	1 cut(s)	755
NheI	GCTAGC	1 cut(s)	1537
NlaIII	CATG	5 cut(s)	295, 574, 592, 955, 1159
NmeAIII	GCCGAG	4 cut(s)	726, 882, 933, 1263
NmuCI	GTSAC	3 cut(s)	336, 454, 730
NotI	GCGGCCGC	1 cut(s)	765
PagI	TCATGA	1 cut(s)	951
PaqCI	CACCTGC	1 cut(s)	46
PasI	CCCWGGG	2 cut(s)	655, 1531
PauI	GCGCGC	1 cut(s)	1329
PcsI	WCGNNNNNNNCGW	2 cut(s)	696, 1062
PdiI	GCCGGC	1 cut(s)	757
PflFI	GACNNNGTC	2 cut(s)	206, 220
PflMI	CCANNNNNTGG	1 cut(s)	1506
PfoI	TCCNGGA	1 cut(s)	1184
PleI	GAGTC	2 cut(s)	1427, 1428
PluTI	GGCGCC	1 cut(s)	857
PmaCI	CACGTG	2 cut(s)	838, 846
PmlI	CACGTG	2 cut(s)	838, 846
PpsI	GAGTC	2 cut(s)	1427, 1428
Ppu21I	YACGTR	3 cut(s)	838, 846, 1039
PpuMI	RGGWCCY	1 cut(s)	553
Psp124BI	GAGCTC	2 cut(s)	1092, 1284
Psp5II	RGGWCCY	1 cut(s)	553
PspCI	CACGTG	2 cut(s)	838, 846
PspOMI	GGGCCC	1 cut(s)	1527
PspPPI	RGGWCCY	1 cut(s)	553
PsyI	GACNNNGTC	2 cut(s)	206, 220
PteI	GCGCGC	1 cut(s)	1329
RsaI	GTAC	3 cut(s)	518, 944, 1317
RsaNI	GTAC	3 cut(s)	517, 943, 1316
RseI	CAYNNNNRTG	1 cut(s)	569
SacI	GAGCTC	2 cut(s)	1092, 1284
SalI	GTCGAC	1 cut(s)	163
SaqAI	TTAA	1 cut(s)	24
Sau3AI	GATC	6 cut(s)	948, 954, 1032, 1193, 1233, 1440
SchI	GAGTC	2 cut(s)	1428, 1428
SduI	GDGCHC	8 cut(s)	381, 433, 843, 1092, 1275, 1284, 1404, 1531
SfaNI	GCATC	4 cut(s)	70, 204, 669, 1374
SfoI	GGCGCC	1 cut(s)	855
SgrAI	CRCCGGYG	1 cut(s)	755
SinI	GGWCC	4 cut(s)	94, 553, 979, 1497
SmaI	CCCGGG	1 cut(s)	1076
SmiMI	CAYNNNNRTG	1 cut(s)	569
Sse9I	AATT	2 cut(s)	25, 189
SspDI	GGCGCC	1 cut(s)	853
SspMI	CTAG	5 cut(s)	128, 389, 806, 1268, 1538
SstI	GAGCTC	2 cut(s)	1092, 1284
StyI	CCWWGG	2 cut(s)	393, 1267
TaaI	ACNGT	2 cut(s)	994, 1303
TaiI	ACGT	9 cut(s)	207, 439, 819, 840, 848, 1028, 1041, 1250, 1356
TaqI	TCGA	3 cut(s)	164, 527, 1001
TasI	AATT	2 cut(s)	25, 189
TatI	WGTACW	1 cut(s)	1315
Tru1I	TTAA	1 cut(s)	24
Tru9I	TTAA	1 cut(s)	24
TscAI	CASTG	1 cut(s)	345
TseFI	GTSAC	3 cut(s)	336, 454, 730
TseI	GCWGC	8 cut(s)	47, 180, 508, 796, 832, 889, 912, 1346
Tsp45I	GTSAC	3 cut(s)	336, 454, 730
TspGWI	ACGGA	3 cut(s)	364, 910, 1517
TspMI	CCCGGG	1 cut(s)	1074
TspRI	CASTG	1 cut(s)	345
Tth111I	GACNNNGTC	2 cut(s)	206, 220
Van91I	CCANNNNNTGG	1 cut(s)	1506
VpaK11BI	GGWCC	4 cut(s)	94, 553, 979, 1497
XcmI	CCANNNNNNNNNTGG	1 cut(s)	298
XmaI	CCCGGG	1 cut(s)	1074
XmaJI	CCTAGG	1 cut(s)	1267
XmiI	GTMKAC	1 cut(s)	164
XspI	CTAG	5 cut(s)	128, 389, 806, 1268, 1538
ZraI	GACGTC	2 cut(s)	1026, 1248

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.