Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr2A

Orthogroup ID

OG0011869

Physical Location & Seq

Genomic Coordinates Forward (+)

5635858 .. 5638929

Gene Structure 3072 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh2AG067900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1683 bp

ATGTGTAATCCAAACCCTTCTGTTAATTCCAGCAAGACCCAGAAAGCAGCCGAGCAGGTGCATCAACAGCCACAGCAAGGTCATCTCTTTCTGGACCTCTTCTTCTTGTCAGATGAGCCGCCAAAGCTAGTAGTAAAGCAACTACAACAGGCACCGTCGTCGTCGACTGGGAGCCCCCCAATTTGCATCACGGACGTAGTCAAAGAGACCAAGTCCCTGTTCAAACTGGCCTTCCCCATACTCATCACAGCTCTCATTCTCTACTCCCGCTCAGCCCTGTCCATGCTGTTCCTCGGCCGCCTGGGCGATTTAGAACTCGCCTCGGGGTCACTGGCCATAGCCTTTGCCAACATCACAGGCTACTCCGTGCTCTCCGGGCTAGCCTTGGGTATGGAGCCGCTGTGTTCCCAAGCCTTCGGAGCACAACGTCCCAAGCTTCTGTCAGTCACTCTCCACCGCGCTGTCATCTTCCTCGTAGTCTGTTCACTCCCCATTTCGCTGCTGTGGTACAATATCTCGACCATTCTTTTGTATCTTCGCCAGGACCCCAACATCACTAACATGGCTCACACCTATCTCATGTTCTCCCTCCCTGACCTTTTCACCAACTCCCTCATTCACCCAATCCGCATTTACCTTCGCGCCCAGGGCATCACCCACCCCCTCACCCTCGCCTCCCTCGCCGGAGCCGTCTTCCATTTCCCCATGAATCTCCTGCTCGTCACCAGGCTCCGCCTCGGCGTCGCCGGCGTCGCGGCCGCCTCCGCCGCCTCCAACTTCTTCGTGCTGCTCTGCCTAGTTGCATACGTCTGGGCGACCAGGCTGCACGTGCCCACGTGGACTGCGCCGAGCCGGGAGTGCTTGACCGGCTGGAAGCCCCTGCTCCGGCTGGCCGCGCCGAGCTGCGTGTCCGTTTGCTTGGAATGGTGGTGGTACGAGATCATGATCGTCTTGTGTGGCCTCCTGGTGGACCCCAAAGCAACCGTCGCCTCGATGGGAGTGCTTATCCAAACGACGTCGTTGATCTACGTGTTCCCGTCGTCTCTCGGGTTCGCCGTGTCCACCCGGGTCGGCAACGAGCTCGGGGCGAACCGGCCCAACCGGGCCAGGCTATCCGCTGTGGTCGCCATTCTCCTGGCCTTCCTCATGGGCCTCTCCGCCACGACCTTCGCCTCCGGGATGAGATCAGGGCTGTGGGGCCGCATGTTCACCCACGACGCGGAGATCATACGGCTGACGTCTGCCGCGCTTCCAATCCTAGGGCTGTGCGAGCTCGGCAACTGCCCGCAGACCGTCGCGTGTGGTGTACTCAGGGGAAGCGCGCGTCCGACTACCGCTGCCAACGTGAACCTCAGCGCGTTCTATCTGGTGGGGATGCCCGTGGCGGTTGGGCTCGGGTTCTGGGTCGGAGTCGGGTTCAATGGACTCTGGATCGGGTTGCTGTCGGCCCAGATTTGTTGTGCCGGGCTGATGTTGTATGTTGTTGGGACCACGGACTGGGATTTCCAGGCGAAAAGGGCCCAGGGGCTATCGTGCGCCGGGTGCGATGTGATACTGCCTCCTCCTCCTCCTCCAACTTGTAGCGATCCTCCTTCAACTAGTAGCGATTCCAAAGGTGAAGAAGAGGAGCCATTGATTATCATTACAGTGCCTTCTTCTTCTTCTTCTTCTTCTTCCCGATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005215 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005768 GO:0005770 GO:0006810 GO:0006855 GO:0007275 GO:0007568 GO:0008150 GO:0009653 GO:0010008 GO:0010015 GO:0010150 GO:0010252 GO:0012505 GO:0015238 GO:0015893 GO:0016020 GO:0022622 GO:0022857 GO:0031090 GO:0031347 GO:0031348 GO:0031410 GO:0031982 GO:0032501 GO:0032502 GO:0040008 GO:0042221 GO:0042493 GO:0042592 GO:0043226 GO:0043227 GO:0043229 GO:0044422 GO:0044424 GO:0044433 GO:0044440 GO:0044444 GO:0044446 GO:0044464 GO:0046620 GO:0048364 GO:0048366 GO:0048367 GO:0048519 GO:0048583 GO:0048585 GO:0048638 GO:0048731 GO:0048827 GO:0048856 GO:0048878 GO:0050789 GO:0050793 GO:0050801 GO:0050896 GO:0051179 GO:0051234 GO:0051239 GO:0055065 GO:0055072 GO:0055076 GO:0055080 GO:0055085 GO:0065007 GO:0065008 GO:0080134 GO:0090693 GO:0097708 GO:0098588 GO:0098771 GO:0098805 GO:0099402 GO:1905392

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

MatE

Protein Analysis

560

Amino Acids

60.03

Weight (kDa)

8.63

Isoelectric Point (pI)

42.11

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
MatE	PF01554	79 - 238	1.9e-34	MatE
MatE	PF01554	300 - 462	1.5e-33	MatE

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0011869)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G29140
fragaria_vesca	FvH4_1g06290 FvH4_3g02790 FvH4_3g02831
malus_domestica	MD02G1066700.v1.1 MD15G1197200.v1.1
prunus_persica	Prupe.7G218600_v2.0.a1
pyrus_communis	pycom02g05280 pycom15g17620
rosa_chinensis	RchiOBHm_Chr2g0091991
rosa_laevigata	RLG00000016268
rosa_multiflora	Rmu_co8445145.1_g000001 Rmu_sc0000524.1_g000001
rosa_roxburghii	Rroxscaffold_2G00149550
rosa_rugosa	Rorug02G0022200
rosa_samantha	Rh2AG067900 Rh2BG067200 Rh2CG068500
rosa_wichuraiana	Rw2G005320

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	46
AatII	GACGTC	2 cut(s)	1019, 1241
Acc36I	ACCTGC	1 cut(s)	46
AccB1I	GGYRCC	1 cut(s)	151
AccB7I	CCANNNNNTGG	1 cut(s)	1497
AccBSI	CCGCTC	1 cut(s)	270
AccI	GTMKAC	1 cut(s)	164
AclWI	GGATC	2 cut(s)	1439, 1580
AcoI	YGGCCR	4 cut(s)	295, 333, 756, 891
AcvI	CACGTG	2 cut(s)	829, 837
AcyI	GRCGYC	4 cut(s)	741, 750, 1016, 1238
AfaI	GTAC	3 cut(s)	509, 935, 1308
AfiI	CCNNNNNNNGG	6 cut(s)	77, 885, 967, 1219, 1259, 1497
AflIII	ACRYGT	1 cut(s)	1029
AgsI	TTSAA	3 cut(s)	223, 1420, 1596
AhlI	ACTAGT	1 cut(s)	1598
AjuI	GAANNNNNNNTTGG	2 cut(s)	203, 235
AluBI	AGCT	6 cut(s)	127, 251, 436, 903, 1081, 1273
AluI	AGCT	6 cut(s)	127, 251, 436, 903, 1081, 1273
Alw21I	GWGCWC	4 cut(s)	372, 424, 1083, 1275
Alw26I	GTCTC	2 cut(s)	200, 1047
AlwI	GGATC	2 cut(s)	1439, 1580
Ama87I	CYCGRG	5 cut(s)	322, 1046, 1065, 1082, 1394
ApaI	GGGCCC	1 cut(s)	1522
ApeKI	GCWGC	6 cut(s)	47, 499, 787, 823, 903, 1337
ArsI	GACNNNNNNTTYG	4 cut(s)	511, 543, 969, 1001
AspA2I	CCTAGG	1 cut(s)	1258
AspLEI	GCGC	9 cut(s)	461, 644, 847, 898, 1249, 1322, 1324, 1358, 1538
AsuC2I	CCSGG	8 cut(s)	376, 854, 1066, 1067, 1103, 1177, 1465, 1540
AsuHPI	GGTGA	7 cut(s)	595, 611, 646, 658, 715, 1201, 1628
AsuNHI	GCTAGC	1 cut(s)	379
AvaI	CYCGRG	5 cut(s)	322, 1046, 1065, 1082, 1394
AvaII	GGWCC	4 cut(s)	94, 544, 970, 1488
AvrII	CCTAGG	1 cut(s)	1258
BaeGI	GKGCMC	2 cut(s)	834, 1522
BalI	TGGCCA	1 cut(s)	335
BanI	GGYRCC	1 cut(s)	151
BanII	GRGCYC	5 cut(s)	176, 1083, 1275, 1395, 1522
BbrPI	CACGTG	2 cut(s)	829, 837
BbsI	GAAGAC	1 cut(s)	685
Bbv12I	GWGCWC	4 cut(s)	372, 424, 1083, 1275
BbvCI	CCTCAGC	1 cut(s)	1352
BbvI	GCAGC	6 cut(s)	59, 486, 774, 810, 890, 1324
BccI	CCATC	1 cut(s)	988
BceAI	ACGGC	3 cut(s)	674, 1040, 1247
BcgI	CGANNNNNNTGC	8 cut(s)	141, 175, 805, 839, 982, 1016, 1063, 1097
BcnI	CCSGG	8 cut(s)	376, 854, 1066, 1067, 1103, 1177, 1465, 1540
BcoDI	GTCTC	2 cut(s)	200, 1047
BcuI	ACTAGT	1 cut(s)	1598
BfaI	CTAG	5 cut(s)	128, 380, 797, 1259, 1599
BfuAI	ACCTGC	1 cut(s)	46
BglI	GCCNNNNNGGC	1 cut(s)	303
BlnI	CCTAGG	1 cut(s)	1258
BlpI	GCTNAGC	1 cut(s)	271
Bme18I	GGWCC	4 cut(s)	94, 544, 970, 1488
BmeT110I	CYCGRG	5 cut(s)	322, 1046, 1065, 1082, 1394
BmrI	ACTGGG	2 cut(s)	177, 1507
BmsI	GCATC	4 cut(s)	70, 195, 660, 1365
BmtI	GCTAGC	1 cut(s)	383
BmuI	ACTGGG	2 cut(s)	177, 1507
BpiI	GAAGAC	1 cut(s)	685
Bpu10I	CCTNAGC	1 cut(s)	1352
Bpu1102I	GCTNAGC	1 cut(s)	271
BpuMI	CCSGG	8 cut(s)	376, 854, 1066, 1067, 1103, 1177, 1465, 1540
BsaAI	YACGTR	3 cut(s)	829, 837, 1030
BsaBI	GATNNNNATC	1 cut(s)	944
BsaHI	GRCGYC	4 cut(s)	741, 750, 1016, 1238
BsaI	GGTCTC	1 cut(s)	200
BsaXI	ACNNNNNCTCC	2 cut(s)	386, 416
Bsc4I	CCNNNNNNNGG	6 cut(s)	77, 885, 967, 1219, 1259, 1497
Bse118I	RCCGGY	3 cut(s)	746, 866, 1092
Bse1I	ACTGG	4 cut(s)	172, 231, 336, 1502
Bse8I	GATNNNNATC	1 cut(s)	944
BseGI	GGATG	2 cut(s)	1185, 1380
BseJI	GATNNNNATC	1 cut(s)	944
BseLI	CCNNNNNNNGG	6 cut(s)	77, 885, 967, 1219, 1259, 1497
BseMII	CTCAG	3 cut(s)	285, 1324, 1366
BseNI	ACTGG	4 cut(s)	172, 231, 336, 1502
BsePI	GCGCGC	1 cut(s)	1320
BseRI	GAGGAG	5 cut(s)	1551, 1554, 1557, 1560, 1640
BseSI	GKGCMC	2 cut(s)	834, 1522
BseX3I	CGGCCG	2 cut(s)	295, 756
BseXI	GCAGC	6 cut(s)	59, 486, 774, 810, 890, 1324
BsgI	GTGCAG	1 cut(s)	809
Bsh1285I	CGRYCG	2 cut(s)	298, 759
BshNI	GGYRCC	1 cut(s)	151
BsiEI	CGRYCG	2 cut(s)	298, 759
BsiHKAI	GWGCWC	4 cut(s)	372, 424, 1083, 1275
BsiHKCI	CYCGRG	5 cut(s)	322, 1046, 1065, 1082, 1394
BslFI	GGGAC	3 cut(s)	199, 414, 1501
BslI	CCNNNNNNNGG	6 cut(s)	77, 885, 967, 1219, 1259, 1497
BsmAI	GTCTC	2 cut(s)	200, 1047
BsmBI	CGTCTC	1 cut(s)	1047
BsmFI	GGGAC	3 cut(s)	199, 414, 1501
Bso31I	GGTCTC	1 cut(s)	200
BsoBI	CYCGRG	5 cut(s)	322, 1046, 1065, 1082, 1394
Bsp120I	GGGCCC	1 cut(s)	1518
Bsp1286I	GDGCHC	8 cut(s)	176, 372, 424, 834, 1083, 1275, 1395, 1522
Bsp143I	GATC	7 cut(s)	939, 945, 1023, 1184, 1224, 1431, 1585
Bsp1720I	GCTNAGC	1 cut(s)	271
BspCNI	CTCAG	3 cut(s)	284, 1323, 1365
BspHI	TCATGA	1 cut(s)	942
BspMI	ACCTGC	1 cut(s)	46
BspOI	GCTAGC	1 cut(s)	383
BspPI	GGATC	2 cut(s)	1439, 1580
BspT107I	GGYRCC	1 cut(s)	151
BspTNI	GGTCTC	1 cut(s)	200
BsrBI	CCGCTC	1 cut(s)	270
BsrFI	RCCGGY	3 cut(s)	746, 866, 1092
BsrI	ACTGG	4 cut(s)	172, 231, 336, 1502
BssAI	RCCGGY	3 cut(s)	746, 866, 1092
BssHII	GCGCGC	1 cut(s)	1320
BssMI	GATC	7 cut(s)	939, 945, 1023, 1184, 1224, 1431, 1585
BssNI	GRCGYC	4 cut(s)	741, 750, 1016, 1238
BssT1I	CCWWGG	2 cut(s)	384, 1258
Bst4CI	ACNGT	4 cut(s)	156, 985, 1294, 1648
Bst6I	CTCTTC	2 cut(s)	104, 1617
BstACI	GRCGYC	4 cut(s)	741, 750, 1016, 1238
BstBAI	YACGTR	3 cut(s)	829, 837, 1030
BstC8I	GCNNGC	6 cut(s)	381, 748, 891, 1271, 1286, 1322
BstDEI	CTNAG	3 cut(s)	271, 1310, 1352
BstDSI	CCRYGG	2 cut(s)	1380, 1491
BstF5I	GGATG	2 cut(s)	1185, 1380
BstHHI	GCGC	9 cut(s)	461, 644, 847, 898, 1249, 1322, 1324, 1358, 1538
BstKTI	GATC	7 cut(s)	942, 948, 1026, 1187, 1227, 1434, 1588
BstMAI	GTCTC	2 cut(s)	200, 1047
BstMBI	GATC	7 cut(s)	939, 945, 1023, 1184, 1224, 1431, 1585
BstMCI	CGRYCG	2 cut(s)	298, 759
BstNSI	RCATGY	1 cut(s)	1207
BstSLI	GKGCMC	2 cut(s)	834, 1522
BstV1I	GCAGC	6 cut(s)	59, 486, 774, 810, 890, 1324
BstV2I	GAAGAC	1 cut(s)	685
BstXI	CCANNNNNNTGG	1 cut(s)	1135
BstZI	CGGCCG	2 cut(s)	295, 756
BtgI	CCRYGG	2 cut(s)	1380, 1491
BtgZI	GCGATG	1 cut(s)	1560
BtsCI	GGATG	2 cut(s)	1185, 1380
BtsIMutI	CAGTG	2 cut(s)	329, 1653
BveI	ACCTGC	1 cut(s)	46
Cac8I	GCNNGC	6 cut(s)	381, 748, 891, 1271, 1286, 1322
CciI	TCATGA	1 cut(s)	942
CciNI	GCGGCCGC	1 cut(s)	756
CfoI	GCGC	9 cut(s)	461, 644, 847, 898, 1249, 1322, 1324, 1358, 1538
Cfr10I	RCCGGY	3 cut(s)	746, 866, 1092
Cfr9I	CCCGGG	1 cut(s)	1065
CseI	GACGC	4 cut(s)	730, 739, 1226, 1313
Csp6I	GTAC	3 cut(s)	508, 934, 1307
CviAII	CATG	7 cut(s)	283, 562, 580, 706, 943, 1147, 1204
CviQI	GTAC	3 cut(s)	508, 934, 1307
DdeI	CTNAG	3 cut(s)	271, 1310, 1352
DpnI	GATC	7 cut(s)	941, 947, 1025, 1186, 1226, 1433, 1587
DpnII	GATC	7 cut(s)	939, 945, 1023, 1184, 1224, 1431, 1585
EaeI	YGGCCR	4 cut(s)	295, 333, 756, 891
EagI	CGGCCG	2 cut(s)	295, 756
Eam1104I	CTCTTC	2 cut(s)	104, 1617
EarI	CTCTTC	2 cut(s)	104, 1617
EciI	GGCGGA	3 cut(s)	722, 754, 1147
Ecl136II	GAGCTC	2 cut(s)	1081, 1273
EclXI	CGGCCG	2 cut(s)	295, 756
Eco130I	CCWWGG	2 cut(s)	384, 1258
Eco24I	GRGCYC	5 cut(s)	176, 1083, 1275, 1395, 1522
Eco31I	GGTCTC	1 cut(s)	200
Eco47I	GGWCC	4 cut(s)	94, 544, 970, 1488
Eco52I	CGGCCG	2 cut(s)	295, 756
Eco53kI	GAGCTC	2 cut(s)	1081, 1273
Eco72I	CACGTG	2 cut(s)	829, 837
Eco88I	CYCGRG	5 cut(s)	322, 1046, 1065, 1082, 1394
EcoICRI	GAGCTC	2 cut(s)	1081, 1273
EcoO109I	RGGNCCY	2 cut(s)	544, 1518
EcoT14I	CCWWGG	2 cut(s)	384, 1258
EcoT38I	GRGCYC	5 cut(s)	176, 1083, 1275, 1395, 1522
ErhI	CCWWGG	2 cut(s)	384, 1258
Esp3I	CGTCTC	1 cut(s)	1047
FaeI	CATG	7 cut(s)	286, 565, 583, 709, 946, 1150, 1207
FaqI	GGGAC	3 cut(s)	199, 414, 1501
FatI	CATG	7 cut(s)	282, 561, 579, 705, 942, 1146, 1203
FauI	CCCGC	2 cut(s)	275, 1293
FblI	GTMKAC	1 cut(s)	164
FokI	GGATG	2 cut(s)	1192, 1387
FriOI	GRGCYC	5 cut(s)	176, 1083, 1275, 1395, 1522
FspBI	CTAG	5 cut(s)	128, 380, 797, 1259, 1599
GlaI	GCGC	9 cut(s)	460, 643, 846, 897, 1248, 1321, 1323, 1357, 1537
HgaI	GACGC	4 cut(s)	730, 739, 1226, 1313
HhaI	GCGC	9 cut(s)	461, 644, 847, 898, 1249, 1322, 1324, 1358, 1538
Hin1I	GRCGYC	4 cut(s)	741, 750, 1016, 1238
Hin1II	CATG	7 cut(s)	286, 565, 583, 709, 946, 1150, 1207
Hin6I	GCGC	9 cut(s)	459, 642, 845, 896, 1247, 1320, 1322, 1356, 1536
HinP1I	GCGC	9 cut(s)	459, 642, 845, 896, 1247, 1320, 1322, 1356, 1536
HincII	GTYRAC	1 cut(s)	165
HindII	GTYRAC	1 cut(s)	165
HindIII	AAGCTT	1 cut(s)	434
HinfI	GANTC	4 cut(s)	709, 1410, 1425, 1607
HphI	GGTGA	7 cut(s)	595, 611, 646, 658, 715, 1201, 1628
Hpy166II	GTNNAC	8 cut(s)	165, 485, 840, 970, 1062, 1209, 1307, 1348
Hpy188I	TCNGA	4 cut(s)	112, 419, 1329, 1409
Hpy188III	TCNNGA	5 cut(s)	92, 517, 943, 1429, 1677
Hpy8I	GTNNAC	8 cut(s)	165, 485, 840, 970, 1062, 1209, 1307, 1348
HpyAV	CCTTC	8 cut(s)	27, 241, 424, 647, 1150, 1177, 1602, 1662
HpyCH4III	ACNGT	4 cut(s)	156, 985, 1294, 1648
HpyCH4IV	ACGT	9 cut(s)	195, 427, 807, 828, 836, 1016, 1029, 1238, 1344
HpyCH4V	TGCA	4 cut(s)	61, 186, 803, 826
HpyF3I	CTNAG	3 cut(s)	271, 1310, 1352
HpySE526I	ACGT	9 cut(s)	195, 427, 807, 828, 836, 1016, 1029, 1238, 1344
Hsp92I	GRCGYC	4 cut(s)	741, 750, 1016, 1238
Hsp92II	CATG	7 cut(s)	286, 565, 583, 709, 946, 1150, 1207
HspAI	GCGC	9 cut(s)	459, 642, 845, 896, 1247, 1320, 1322, 1356, 1536
KroI	GCCGGC	1 cut(s)	746
KroNI	GCCGGC	1 cut(s)	748
Kzo9I	GATC	7 cut(s)	939, 945, 1023, 1184, 1224, 1431, 1585
LmnI	GCTCC	7 cut(s)	171, 394, 419, 686, 735, 888, 1627
Lsp1109I	GCAGC	6 cut(s)	59, 486, 774, 810, 890, 1324
LweI	GCATC	4 cut(s)	70, 195, 660, 1365
MaeI	CTAG	5 cut(s)	128, 380, 797, 1259, 1599
MaeII	ACGT	9 cut(s)	195, 427, 807, 828, 836, 1016, 1029, 1238, 1344
MaeIII	GTNAC	3 cut(s)	327, 445, 721
MalI	GATC	7 cut(s)	941, 947, 1025, 1186, 1226, 1433, 1587
MbiI	CCGCTC	1 cut(s)	270
MboI	GATC	7 cut(s)	939, 945, 1023, 1184, 1224, 1431, 1585
MhlI	GDGCHC	8 cut(s)	176, 372, 424, 834, 1083, 1275, 1395, 1522
MlsI	TGGCCA	1 cut(s)	335
MluCI	AATT	2 cut(s)	25, 180
MluNI	TGGCCA	1 cut(s)	335
MlyI	GAGTC	2 cut(s)	1419, 1419
MmeI	TCCRAC	4 cut(s)	798, 1352, 1387, 1598
Mox20I	TGGCCA	1 cut(s)	335
MreI	CGCCGGCG	1 cut(s)	746
MroNI	GCCGGC	1 cut(s)	746
MscI	TGGCCA	1 cut(s)	335
MseI	TTAA	1 cut(s)	24
MslI	CAYNNNNRTG	2 cut(s)	560, 1646
Msp20I	TGGCCA	1 cut(s)	335
MspA1I	CMGCKG	3 cut(s)	400, 1118, 1337
NaeI	GCCGGC	1 cut(s)	748
NciI	CCSGG	8 cut(s)	376, 854, 1066, 1067, 1103, 1177, 1465, 1540
NdeII	GATC	7 cut(s)	939, 945, 1023, 1184, 1224, 1431, 1585
NgoMIV	GCCGGC	1 cut(s)	746
NheI	GCTAGC	1 cut(s)	379
NlaIII	CATG	7 cut(s)	286, 565, 583, 709, 946, 1150, 1207
NmeAIII	GCCGAG	6 cut(s)	76, 273, 717, 873, 924, 1254
NmuCI	GTSAC	3 cut(s)	327, 445, 721
NotI	GCGGCCGC	1 cut(s)	756
NspI	RCATGY	1 cut(s)	1207
PagI	TCATGA	1 cut(s)	942
PaqCI	CACCTGC	1 cut(s)	46
PasI	CCCWGGG	2 cut(s)	646, 1522
PauI	GCGCGC	1 cut(s)	1320
PcsI	WCGNNNNNNNCGW	2 cut(s)	687, 1053
PdiI	GCCGGC	1 cut(s)	748
PfeI	GAWTC	2 cut(s)	709, 1607
PflFI	GACNNNGTC	2 cut(s)	197, 211
PflMI	CCANNNNNTGG	1 cut(s)	1497
PfoI	TCCNGGA	1 cut(s)	1175
PleI	GAGTC	2 cut(s)	1418, 1419
PmaCI	CACGTG	2 cut(s)	829, 837
PmlI	CACGTG	2 cut(s)	829, 837
PpsI	GAGTC	2 cut(s)	1418, 1419
Ppu21I	YACGTR	3 cut(s)	829, 837, 1030
PpuMI	RGGWCCY	1 cut(s)	544
Psp124BI	GAGCTC	2 cut(s)	1083, 1275
Psp5II	RGGWCCY	1 cut(s)	544
PspCI	CACGTG	2 cut(s)	829, 837
PspOMI	GGGCCC	1 cut(s)	1518
PspPPI	RGGWCCY	1 cut(s)	544
PsyI	GACNNNGTC	2 cut(s)	197, 211
PteI	GCGCGC	1 cut(s)	1320
RsaI	GTAC	3 cut(s)	509, 935, 1308
RsaNI	GTAC	3 cut(s)	508, 934, 1307
RseI	CAYNNNNRTG	2 cut(s)	560, 1646
SacI	GAGCTC	2 cut(s)	1083, 1275
SalI	GTCGAC	1 cut(s)	163
SaqAI	TTAA	1 cut(s)	24
Sau3AI	GATC	7 cut(s)	939, 945, 1023, 1184, 1224, 1431, 1585
SchI	GAGTC	2 cut(s)	1419, 1419
SduI	GDGCHC	8 cut(s)	176, 372, 424, 834, 1083, 1275, 1395, 1522
SfaNI	GCATC	4 cut(s)	70, 195, 660, 1365
SgrAI	CRCCGGYG	1 cut(s)	746
SinI	GGWCC	4 cut(s)	94, 544, 970, 1488
SmaI	CCCGGG	1 cut(s)	1067
SmiMI	CAYNNNNRTG	2 cut(s)	560, 1646
SpeI	ACTAGT	1 cut(s)	1598
Sse9I	AATT	2 cut(s)	25, 180
SspMI	CTAG	5 cut(s)	128, 380, 797, 1259, 1599
SstI	GAGCTC	2 cut(s)	1083, 1275
StyI	CCWWGG	2 cut(s)	384, 1258
TaaI	ACNGT	4 cut(s)	156, 985, 1294, 1648
TaiI	ACGT	9 cut(s)	198, 430, 810, 831, 839, 1019, 1032, 1241, 1347
TaqI	TCGA	3 cut(s)	164, 518, 992
TasI	AATT	2 cut(s)	25, 180
TatI	WGTACW	1 cut(s)	1306
TauI	GCSGC	9 cut(s)	121, 300, 400, 758, 761, 770, 896, 1203, 1247
TfiI	GAWTC	2 cut(s)	709, 1607
Tru1I	TTAA	1 cut(s)	24
Tru9I	TTAA	1 cut(s)	24
TscAI	CASTG	2 cut(s)	336, 1653
TseFI	GTSAC	3 cut(s)	327, 445, 721
TseI	GCWGC	6 cut(s)	47, 499, 787, 823, 903, 1337
Tsp45I	GTSAC	3 cut(s)	327, 445, 721
TspDTI	ATGAA	1 cut(s)	722
TspGWI	ACGGA	4 cut(s)	206, 355, 901, 1508
TspMI	CCCGGG	1 cut(s)	1065
TspRI	CASTG	2 cut(s)	336, 1653
Tth111I	GACNNNGTC	2 cut(s)	197, 211
Van91I	CCANNNNNTGG	1 cut(s)	1497
VpaK11BI	GGWCC	4 cut(s)	94, 544, 970, 1488
XceI	RCATGY	1 cut(s)	1207
XmaI	CCCGGG	1 cut(s)	1065
XmaJI	CCTAGG	1 cut(s)	1258
XmiI	GTMKAC	1 cut(s)	164
XspI	CTAG	5 cut(s)	128, 380, 797, 1259, 1599
ZraI	GACGTC	2 cut(s)	1017, 1239

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.