MD15G1243100.v1.1

Tetratricopeptide repeat

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr15
OG0011032
Physical Location & Seq
Reverse (-)
19975263 .. 19977395
2133 bp
Loading structure...
UTR
Exon/CDS
Intron
MD15G1243100.v1.1.491

Sequence Viewer

Length: 1455 bp
ATGTTGCAAGATATGTGGAATGCTCCGCCTGGTTTCAGACCCACCAAGTCTGCTCCTTCCTCTCCGGCCAAGCCTCTCGGAATTTCGAGGACTCATTCCGTCGGAACTGAGTCATTTCACGTAACTCACAAAGTTCCGGTAGGCGACACTCCTTATGTCAGAGCCAAGAATGTTCAGCTGGTGGAGAAGGATCCGGAGAAGGCAATCCCGCTGTTTTGGGCAGCCATTAATTCTGGGGACAGAGTGGATAGTGCTTTGAAGGACATGGCGATTGTGATGAAGCAACAGAGCCGGGCAGAAGAAGCGATTGAGGCCATCAAGTCGTTGAGACACCGGTGTTCGGATCAAGCTCAGGAGTCTCTTGACAACATTCTTCTGGATCTTTACAAGAGATGTGGGAGATTGGATGACCAAATATCACTTTTGAGGCACAAGTTGTACTTGATTCAAAAAGGGATGGCTTTCAACGGAAAGCGCACGAAAACTGCCAGATCTCAGGGGAAGAAATTCCAGGTCTCTGTGGAACAAGAAGCCACTAGATTACTGGGGAACTTGGGTTGGGCTTTGATGCAGCAGAACAACTACATTGAAGCAGAAGATGCTTATCGCCGAGCACTGACAATTGCGCCGGATAACAACAAGATGTGCAACCTCGGAATCTGCCTAATGAAGCAAGGAAGAATTTCTGAGGCTAAAGAGAATCTCCGTCGTGTTAAGCCGGCAGTTGTGGATGGTCCAAGAGGGACAGATTCCCATCTCAAGGCCTATGAGAGGGCTCAGCAGATGCTCAAAGATCTTGAGTCTGAGATGATGAACAAAGGCGGGGATCGCGTCGAGCAGAGCAGGCTTTTCGATGCCTTTTTGGGTTCTTCATCGATTTGGCAGCCTCAGCCTTGCAGAGACCACCACCACACAAGTTTGCCAACAACAGGTTCTGTGAAATCTCAGCCCGATGAGTTTGCTGATGAGAATATCAACTCCAACTTTTTCGCAAACCCGAAGATGGGATTTCCTCAGCATAAAATTATCAATCAAGTCCCTCAACCAAACTCACTTAATGTTGCTGCAAAGCCTTACTTCTCAAAGTCCATTTCGGCTGCCCCAACCGCCACTCAATTTGCTGAGACGCTTAAGAGGACAAGGTCCGGGAATGCTGCGACTTCAATGAGAGTGACCGAGGCGATTGAGATCCCCAAACCTGTTGTGGATTTGGTCGTACCAGAGAACAAGACCAGAAGAAGGCTCTCTCTTGAAGAAACAGGGACTGAGTTGACAGGATTGTTGCCCGACAACAAGGACTTCGAAGAGGCTATAATCGCCGCGGTCATTGACCCGACAAATGAGGCTGGGAAGGCGGTTGGAATCAGCAACTGTTCCGGGATGTTTCCGAAGAAGGTTGAGAAGAGGCTCAGGGTTTTTCAGGATATTACACTGTCTCTAAGTCCAAGGGCCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0009507 GO:0009536 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
TPR_1 TPR_19 TPR_2 TPR_8

Protein Analysis

485

Amino Acids

53.85

Weight (kDa)

9.29

Isoelectric Point (pI)

49.98

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
TPR_1 PF00515 181 - 212 3.6e-08 Tetratricopeptide repeat
TPR_2 PF07719 181 - 212 2e-07 Tetratricopeptide repeat
TPR_19 PF14559 189 - 245 2.7e-06 Tetratricopeptide repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0011032)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G51280
fragaria_vesca FvH4_1g11500 FvH4_1g11500
malus_domestica MD02G1127900.v1.1 MD15G1243100.v1.1
prunus_persica Prupe.7G171000_v2.0.a1
pyrus_communis pycom02g10000 pycom15g21420
rosa_chinensis RchiOBHm_Chr2g0099121
rosa_laevigata RLG00000016850
rosa_multiflora Rmu_sc0009113.1_g000006 Rmu_sc0012098.1_g000002 Rmu_sc0034643.1_g000001
rosa_roxburghii Rroxscaffold_2G00143420
rosa_rugosa Rorug02G0076900
rosa_samantha Rh2AG126000 Rh2BG129300 Rh2CG130300 Rh2DG130700
rosa_wichuraiana Rw2G009710

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccII CGCG 2 cut(s) 831, 1322
AccIII TCCGGA 1 cut(s) 193
AciI CCGC 7 cut(s) 26, 209, 822, 1107, 1320, 1322, 1355
AclWI GGATC 6 cut(s) 185, 198, 351, 387, 834, 1183
AcoI YGGCCR 1 cut(s) 66
AcsI RAATTY 3 cut(s) 81, 506, 681
AfaI GTAC 2 cut(s) 440, 1218
AfiI CCNNNNNNNGG 7 cut(s) 340, 760, 771, 929, 1003, 1004, 1239
AflII CTTAAG 1 cut(s) 1130
AgeI ACCGGT 1 cut(s) 333
AgsI TTSAA 6 cut(s) 259, 449, 466, 590, 1164, 1253
AjnI CCWGG 2 cut(s) 28, 510
AjuI GAANNNNNNNTTGG 2 cut(s) 916, 948
AluBI AGCT 2 cut(s) 178, 350
AluI AGCT 2 cut(s) 178, 350
Alw21I GWGCWC 1 cut(s) 616
Alw26I GTCTC 6 cut(s) 322, 363, 520, 894, 1118, 1440
AlwI GGATC 6 cut(s) 185, 198, 351, 387, 834, 1183
AlwNI CAGNNNCTG 3 cut(s) 935, 1265, 1371
Aor13HI TCCGGA 1 cut(s) 193
AoxI GGCC 4 cut(s) 66, 312, 762, 1449
ApeKI GCWGC 6 cut(s) 221, 571, 883, 1064, 1097, 1154
ApoI RAATTY 3 cut(s) 81, 506, 681
AseI ATTAAT 1 cut(s) 228
AsiGI ACCGGT 1 cut(s) 333
Asp700I GAANNNNTTC 2 cut(s) 506, 682
AspLEI GCGC 2 cut(s) 477, 628
AspS9I GGNCC 3 cut(s) 734, 1143, 1449
AsuC2I CCSGG 3 cut(s) 293, 1147, 1378
AsuII TTCGAA 1 cut(s) 1302
AvaII GGWCC 2 cut(s) 734, 1143
BamHI GGATCC 1 cut(s) 190
BanII GRGCYC 1 cut(s) 778
Bbv12I GWGCWC 1 cut(s) 616
BbvCI CCTCAGC 2 cut(s) 888, 1014
BbvI GCAGC 6 cut(s) 233, 583, 895, 1051, 1084, 1141
BccI CCATC 5 cut(s) 323, 451, 725, 762, 997
BcgI CGANNNNNNTGC 4 cut(s) 832, 866, 941, 975
BciT130I CCWGG 2 cut(s) 30, 512
BcnI CCSGG 3 cut(s) 293, 1147, 1378
BcoDI GTCTC 6 cut(s) 322, 363, 520, 894, 1118, 1440
BfaI CTAG 1 cut(s) 537
BfrI CTTAAG 1 cut(s) 1130
BglII AGATCT 2 cut(s) 491, 793
BisI GCNGC 7 cut(s) 222, 572, 884, 1065, 1098, 1155, 1320
BlpI GCTNAGC 1 cut(s) 777
BlsI GCNGC 7 cut(s) 223, 573, 885, 1066, 1099, 1156, 1321
Bme1390I CCNGG 5 cut(s) 30, 293, 512, 1147, 1378
Bme18I GGWCC 2 cut(s) 734, 1143
BmgT120I GGNCC 3 cut(s) 734, 1143, 1449
BmiI GGNNCC 1 cut(s) 192
BmrFI CCNGG 5 cut(s) 30, 293, 512, 1147, 1378
BmrI ACTGGG 1 cut(s) 554
BmsI GCATC 4 cut(s) 558, 589, 774, 844
BmuI ACTGGG 1 cut(s) 554
Bpu10I CCTNAGC 4 cut(s) 351, 888, 1014, 1409
Bpu1102I GCTNAGC 1 cut(s) 777
Bpu14I TTCGAA 1 cut(s) 1302
BpuEI CTTGAG 2 cut(s) 743, 818
BpuMI CCSGG 3 cut(s) 293, 1147, 1378
Bsa29I ATCGAT 1 cut(s) 875
BsaAI YACGTR 1 cut(s) 121
BsaBI GATNNNNATC 3 cut(s) 603, 753, 1187
BsaI GGTCTC 2 cut(s) 520, 894
BsaJI CCNNGG 4 cut(s) 652, 1176, 1320, 1445
BsaWI WCCGGW 3 cut(s) 136, 193, 333
Bsc4I CCNNNNNNNGG 7 cut(s) 340, 760, 771, 929, 1003, 1004, 1239
Bse118I RCCGGY 2 cut(s) 333, 718
Bse1I ACTGG 1 cut(s) 549
Bse8I GATNNNNATC 3 cut(s) 603, 753, 1187
BseAI TCCGGA 1 cut(s) 193
BseBI CCWGG 2 cut(s) 30, 512
BseCI ATCGAT 1 cut(s) 875
BseDI CCNNGG 4 cut(s) 652, 1176, 1320, 1445
BseGI GGATG 4 cut(s) 412, 462, 736, 1386
BseJI GATNNNNATC 3 cut(s) 603, 753, 1187
BseLI CCNNNNNNNGG 7 cut(s) 340, 760, 771, 929, 1003, 1004, 1239
BseNI ACTGG 1 cut(s) 549
BseXI GCAGC 6 cut(s) 233, 583, 895, 1051, 1084, 1141
BseYI CCCAGC 1 cut(s) 1346
Bsh1236I CGCG 2 cut(s) 831, 1322
BshFI GGCC 4 cut(s) 68, 314, 764, 1451
BshTI ACCGGT 1 cut(s) 333
BshVI ATCGAT 1 cut(s) 875
BsiHKAI GWGCWC 1 cut(s) 616
BsiSI CCGG 9 cut(s) 65, 137, 194, 292, 334, 629, 719, 1146, 1377
BslFI GGGAC 4 cut(s) 251, 757, 1022, 1276
BslI CCNNNNNNNGG 7 cut(s) 340, 760, 771, 929, 1003, 1004, 1239
BsmAI GTCTC 6 cut(s) 322, 363, 520, 894, 1118, 1440
BsmBI CGTCTC 1 cut(s) 1118
BsmFI GGGAC 4 cut(s) 251, 757, 1022, 1276
BsmI GAATGC 2 cut(s) 25, 1156
BsnI GGCC 4 cut(s) 68, 314, 764, 1451
Bso31I GGTCTC 2 cut(s) 520, 894
Bsp119I TTCGAA 1 cut(s) 1302
Bsp1286I GDGCHC 2 cut(s) 616, 778
Bsp13I TCCGGA 1 cut(s) 193
Bsp143I GATC 7 cut(s) 190, 343, 379, 491, 793, 826, 1188
Bsp1720I GCTNAGC 1 cut(s) 777
BspACI CCGC 7 cut(s) 26, 209, 822, 1107, 1320, 1322, 1355
BspANI GGCC 4 cut(s) 68, 314, 764, 1451
BspDI ATCGAT 1 cut(s) 875
BspEI TCCGGA 1 cut(s) 193
BspFNI CGCG 2 cut(s) 831, 1322
BspLI GGNNCC 1 cut(s) 192
BspPI GGATC 6 cut(s) 185, 198, 351, 387, 834, 1183
BspT104I TTCGAA 1 cut(s) 1302
BspTI CTTAAG 1 cut(s) 1130
BspTNI GGTCTC 2 cut(s) 520, 894
BsrFI RCCGGY 2 cut(s) 333, 718
BsrI ACTGG 1 cut(s) 549
BssAI RCCGGY 2 cut(s) 333, 718
BssECI CCNNGG 4 cut(s) 652, 1176, 1320, 1445
BssMI GATC 7 cut(s) 190, 343, 379, 491, 793, 826, 1188
BssT1I CCWWGG 1 cut(s) 1445
Bst2UI CCWGG 2 cut(s) 30, 512
Bst4CI ACNGT 2 cut(s) 1373, 1434
Bst6I CTCTTC 2 cut(s) 1299, 1397
BstAFI CTTAAG 1 cut(s) 1130
BstAPI GCANNNNNTGC 1 cut(s) 599
BstBAI YACGTR 1 cut(s) 121
BstBI TTCGAA 1 cut(s) 1302
BstC8I GCNNGC 2 cut(s) 720, 845
BstDSI CCRYGG 1 cut(s) 1320
BstENI CCTNNNNNAGG 1 cut(s) 769
BstF5I GGATG 4 cut(s) 412, 462, 736, 1386
BstFNI CGCG 2 cut(s) 831, 1322
BstHHI GCGC 2 cut(s) 477, 628
BstKTI GATC 7 cut(s) 193, 346, 382, 494, 796, 829, 1191
BstMAI GTCTC 6 cut(s) 322, 363, 520, 894, 1118, 1440
BstMBI GATC 7 cut(s) 190, 343, 379, 491, 793, 826, 1188
BstMWI GCNNNNNNNGC 9 cut(s) 302, 311, 599, 828, 844, 889, 1106, 1316, 1352
BstNI CCWGG 2 cut(s) 30, 512
BstSCI CCNGG 5 cut(s) 28, 291, 510, 1145, 1376
BstUI CGCG 2 cut(s) 831, 1322
BstV1I GCAGC 6 cut(s) 233, 583, 895, 1051, 1084, 1141
BstX2I RGATCY 5 cut(s) 190, 379, 491, 793, 1188
BstYI RGATCY 5 cut(s) 190, 379, 491, 793, 1188
Bsu15I ATCGAT 1 cut(s) 875
BsuRI GGCC 4 cut(s) 68, 314, 764, 1451
BsuTUI ATCGAT 1 cut(s) 875
BtgI CCRYGG 1 cut(s) 1320
BtsCI GGATG 4 cut(s) 412, 462, 736, 1386
BtsIMutI CAGTG 2 cut(s) 614, 1430
Cac8I GCNNGC 2 cut(s) 720, 845
CaiI CAGNNNCTG 3 cut(s) 935, 1265, 1371
CfoI GCGC 2 cut(s) 477, 628
Cfr10I RCCGGY 2 cut(s) 333, 718
Cfr13I GGNCC 3 cut(s) 734, 1143, 1449
Cfr42I CCGCGG 1 cut(s) 1323
ClaI ATCGAT 1 cut(s) 875
CseI GACGC 2 cut(s) 820, 1135
Csp6I GTAC 2 cut(s) 439, 1217
CspAI ACCGGT 1 cut(s) 333
CspCI CAANNNNNGTGG 5 cut(s) 31, 376, 411, 1099, 1134
CviAII CATG 1 cut(s) 265
CviQI GTAC 2 cut(s) 439, 1217
DpnI GATC 7 cut(s) 192, 345, 381, 493, 795, 828, 1190
DpnII GATC 7 cut(s) 190, 343, 379, 491, 793, 826, 1188
EaeI YGGCCR 1 cut(s) 66
Eam1104I CTCTTC 2 cut(s) 1299, 1397
EarI CTCTTC 2 cut(s) 1299, 1397
EciI GGCGGA 1 cut(s) 15
Eco130I CCWWGG 1 cut(s) 1445
Eco147I AGGCCT 1 cut(s) 764
Eco24I GRGCYC 1 cut(s) 778
Eco31I GGTCTC 2 cut(s) 520, 894
Eco47I GGWCC 2 cut(s) 734, 1143
EcoNI CCTNNNNNAGG 1 cut(s) 769
EcoO109I RGGNCCY 1 cut(s) 1449
EcoRII CCWGG 2 cut(s) 28, 510
EcoT14I CCWWGG 1 cut(s) 1445
EcoT38I GRGCYC 1 cut(s) 778
ErhI CCWWGG 1 cut(s) 1445
Esp3I CGTCTC 1 cut(s) 1118
FaeI CATG 1 cut(s) 268
FaiI YATR 6 cut(s) 14, 156, 266, 768, 1020, 1313
FalI AAGNNNNNCTT 4 cut(s) 425, 457, 1061, 1093
FaqI GGGAC 4 cut(s) 251, 757, 1022, 1276
FatI CATG 1 cut(s) 264
FauI CCCGC 2 cut(s) 216, 815
Fnu4HI GCNGC 7 cut(s) 222, 572, 884, 1065, 1098, 1155, 1320
FokI GGATG 4 cut(s) 419, 469, 743, 1393
FriOI GRGCYC 1 cut(s) 778
Fsp4HI GCNGC 7 cut(s) 222, 572, 884, 1065, 1098, 1155, 1320
FspBI CTAG 1 cut(s) 537
GlaI GCGC 2 cut(s) 476, 627
GluI GCNGC 7 cut(s) 222, 572, 884, 1065, 1098, 1155, 1320
GsaI CCCAGC 1 cut(s) 1350
HaeIII GGCC 4 cut(s) 68, 314, 764, 1451
HapII CCGG 9 cut(s) 65, 137, 194, 292, 334, 629, 719, 1146, 1377
HgaI GACGC 2 cut(s) 820, 1135
HhaI GCGC 2 cut(s) 477, 628
Hin1II CATG 1 cut(s) 268
Hin6I GCGC 2 cut(s) 475, 626
HinP1I GCGC 2 cut(s) 475, 626
HincII GTYRAC 1 cut(s) 1272
HindII GTYRAC 1 cut(s) 1272
HinfI GANTC 9 cut(s) 91, 110, 356, 445, 657, 700, 749, 800, 1362
HpaII CCGG 9 cut(s) 65, 137, 194, 292, 334, 629, 719, 1146, 1377
Hpy166II GTNNAC 1 cut(s) 1272
Hpy188I TCNGA 9 cut(s) 38, 80, 104, 161, 343, 656, 688, 805, 1389
Hpy188III TCNNGA 7 cut(s) 194, 353, 362, 377, 797, 1250, 1421
Hpy8I GTNNAC 1 cut(s) 1272
Hpy99I CGWCG 3 cut(s) 104, 711, 836
HpyAV CCTTC 7 cut(s) 66, 181, 193, 253, 1233, 1345, 1387
HpyCH4III ACNGT 2 cut(s) 1373, 1434
HpyCH4IV ACGT 1 cut(s) 120
HpyCH4V TGCA 5 cut(s) 7, 571, 648, 897, 1067
HpyF10VI GCNNNNNNNGC 9 cut(s) 302, 311, 599, 828, 844, 889, 1106, 1316, 1352
HpySE526I ACGT 1 cut(s) 120
Hsp92II CATG 1 cut(s) 268
HspAI GCGC 2 cut(s) 475, 626
Kpn2I TCCGGA 1 cut(s) 193
KroI GCCGGC 1 cut(s) 718
KroNI GCCGGC 1 cut(s) 720
KspI CCGCGG 1 cut(s) 1323
Kzo9I GATC 7 cut(s) 190, 343, 379, 491, 793, 826, 1188
LmnI GCTCC 2 cut(s) 28, 58
Lsp1109I GCAGC 6 cut(s) 233, 583, 895, 1051, 1084, 1141
LweI GCATC 4 cut(s) 558, 589, 774, 844
MaeI CTAG 1 cut(s) 537
MaeII ACGT 1 cut(s) 120
MaeIII GTNAC 2 cut(s) 121, 1171
MalI GATC 7 cut(s) 192, 345, 381, 493, 795, 828, 1190
MboI GATC 7 cut(s) 190, 343, 379, 491, 793, 826, 1188
MfeI CAATTG 1 cut(s) 621
MflI RGATCY 5 cut(s) 190, 379, 491, 793, 1188
MhlI GDGCHC 2 cut(s) 616, 778
MluCI AATT 7 cut(s) 81, 229, 506, 621, 681, 1023, 1115
MlyI GAGTC 4 cut(s) 85, 119, 365, 809
MmeI TCCRAC 3 cut(s) 82, 1005, 1339
MroI TCCGGA 1 cut(s) 193
MroNI GCCGGC 1 cut(s) 718
MroXI GAANNNNTTC 2 cut(s) 506, 682
MseI TTAA 4 cut(s) 228, 714, 1056, 1131
MspA1I CMGCKG 3 cut(s) 178, 211, 1322
MspCI CTTAAG 1 cut(s) 1130
MspI CCGG 9 cut(s) 65, 137, 194, 292, 334, 629, 719, 1146, 1377
MspR9I CCNGG 5 cut(s) 30, 293, 512, 1147, 1378
MunI CAATTG 1 cut(s) 621
Mva1269I GAATGC 2 cut(s) 25, 1156
MvaI CCWGG 2 cut(s) 30, 512
MvnI CGCG 2 cut(s) 831, 1322
MwoI GCNNNNNNNGC 9 cut(s) 302, 311, 599, 828, 844, 889, 1106, 1316, 1352
NaeI GCCGGC 1 cut(s) 720
NciI CCSGG 3 cut(s) 293, 1147, 1378
NdeII GATC 7 cut(s) 190, 343, 379, 491, 793, 826, 1188
NgoMIV GCCGGC 1 cut(s) 718
NlaIII CATG 1 cut(s) 268
NlaIV GGNNCC 1 cut(s) 192
NmeAIII GCCGAG 1 cut(s) 635
NmuCI GTSAC 1 cut(s) 1171
NspV TTCGAA 1 cut(s) 1302
PceI AGGCCT 1 cut(s) 764
PctI GAATGC 2 cut(s) 25, 1156
PdiI GCCGGC 1 cut(s) 720
PdmI GAANNNNTTC 2 cut(s) 506, 682
PfeI GAWTC 5 cut(s) 445, 657, 700, 749, 1362
PflFI GACNNNGTC 1 cut(s) 1141
PfoI TCCNGGA 2 cut(s) 1145, 1376
PinAI ACCGGT 1 cut(s) 333
PkrI GCNGC 7 cut(s) 223, 573, 885, 1066, 1099, 1156, 1321
PleI GAGTC 4 cut(s) 85, 118, 364, 808
PpsI GAGTC 4 cut(s) 85, 118, 364, 808
Ppu21I YACGTR 1 cut(s) 121
PshBI ATTAAT 1 cut(s) 228
Psp6I CCWGG 2 cut(s) 28, 510
PspFI CCCAGC 1 cut(s) 1346
PspGI CCWGG 2 cut(s) 28, 510
PspN4I GGNNCC 1 cut(s) 192
PspPI GGNCC 3 cut(s) 734, 1143, 1449
PstNI CAGNNNCTG 3 cut(s) 935, 1265, 1371
PsuI RGATCY 5 cut(s) 190, 379, 491, 793, 1188
PsyI GACNNNGTC 1 cut(s) 1141
PvuII CAGCTG 1 cut(s) 178
RsaI GTAC 2 cut(s) 440, 1218
RsaNI GTAC 2 cut(s) 439, 1217
SacII CCGCGG 1 cut(s) 1323
SaqAI TTAA 4 cut(s) 228, 714, 1056, 1131
SatI GCNGC 7 cut(s) 222, 572, 884, 1065, 1098, 1155, 1320
Sau3AI GATC 7 cut(s) 190, 343, 379, 491, 793, 826, 1188
Sau96I GGNCC 3 cut(s) 734, 1143, 1449
SchI GAGTC 4 cut(s) 85, 119, 365, 809
ScrFI CCNGG 5 cut(s) 30, 293, 512, 1147, 1378
SduI GDGCHC 2 cut(s) 616, 778
SetI ASST 9 cut(s) 123, 180, 352, 516, 654, 934, 1145, 1201, 1398
SfaNI GCATC 4 cut(s) 558, 589, 774, 844
Sfr303I CCGCGG 1 cut(s) 1323
SfuI TTCGAA 1 cut(s) 1302
SgrAI CRCCGGYG 1 cut(s) 333
SgrBI CCGCGG 1 cut(s) 1323
SinI GGWCC 2 cut(s) 734, 1143
SmlI CTYRAG 3 cut(s) 758, 797, 1130
SmoI CTYRAG 3 cut(s) 758, 797, 1130
Sse9I AATT 7 cut(s) 81, 229, 506, 621, 681, 1023, 1115
SseBI AGGCCT 1 cut(s) 764
SsiI CCGC 7 cut(s) 26, 209, 822, 1107, 1320, 1322, 1355
SspMI CTAG 1 cut(s) 537
StuI AGGCCT 1 cut(s) 764
StyD4I CCNGG 5 cut(s) 28, 291, 510, 1145, 1376
StyI CCWWGG 1 cut(s) 1445
TaaI ACNGT 2 cut(s) 1373, 1434
TaiI ACGT 1 cut(s) 123
TaqI TCGA 5 cut(s) 86, 834, 852, 875, 1302
TaqII GACCGA 1 cut(s) 1190
TasI AATT 7 cut(s) 81, 229, 506, 621, 681, 1023, 1115
TatI WGTACW 1 cut(s) 438
TauI GCSGC 1 cut(s) 1322
TfiI GAWTC 5 cut(s) 445, 657, 700, 749, 1362
Tru1I TTAA 4 cut(s) 228, 714, 1056, 1131
Tru9I TTAA 4 cut(s) 228, 714, 1056, 1131
TscAI CASTG 2 cut(s) 621, 1437
TseFI GTSAC 1 cut(s) 1171
TseI GCWGC 6 cut(s) 221, 571, 883, 1064, 1097, 1154
Tsp45I GTSAC 1 cut(s) 1171
TspDTI ATGAA 4 cut(s) 293, 683, 827, 861
TspGWI ACGGA 3 cut(s) 88, 483, 695
TspRI CASTG 2 cut(s) 621, 1437
Tth111I GACNNNGTC 1 cut(s) 1141
Vha464I CTTAAG 1 cut(s) 1130
VpaK11BI GGWCC 2 cut(s) 734, 1143
VspI ATTAAT 1 cut(s) 228
XagI CCTNNNNNAGG 1 cut(s) 769
XapI RAATTY 3 cut(s) 81, 506, 681
XcmI CCANNNNNNNNNTGG 2 cut(s) 541, 1201
XmnI GAANNNNTTC 2 cut(s) 506, 682
XspI CTAG 1 cut(s) 537
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.