Tetratricopeptide repeat
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G51280 |
| fragaria_vesca | FvH4_1g11500 FvH4_1g11500 |
| malus_domestica | MD02G1127900.v1.1 MD15G1243100.v1.1 |
| prunus_persica | Prupe.7G171000_v2.0.a1 |
| pyrus_communis | pycom02g10000 pycom15g21420 |
| rosa_chinensis | RchiOBHm_Chr2g0099121 |
| rosa_laevigata | RLG00000016850 |
| rosa_multiflora | Rmu_sc0009113.1_g000006 Rmu_sc0012098.1_g000002 Rmu_sc0034643.1_g000001 |
| rosa_roxburghii | Rroxscaffold_2G00143420 |
| rosa_rugosa | Rorug02G0076900 |
| rosa_samantha | Rh2AG126000 Rh2BG129300 Rh2CG130300 Rh2DG130700 |
| rosa_wichuraiana | Rw2G009710 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 1213 |
| AccII | CGCG | 2 cut(s) | 831, 998 |
| AccIII | TCCGGA | 1 cut(s) | 193 |
| AciI | CCGC | 7 cut(s) | 26, 209, 296, 486, 706, 728, 829 |
| AclWI | GGATC | 5 cut(s) | 185, 198, 351, 387, 801 |
| AcoI | YGGCCR | 1 cut(s) | 66 |
| AcsI | RAATTY | 2 cut(s) | 506, 979 |
| AcvI | CACGTG | 1 cut(s) | 121 |
| AfaI | GTAC | 2 cut(s) | 440, 1224 |
| AfiI | CCNNNNNNNGG | 6 cut(s) | 340, 559, 760, 771, 1140, 1245 |
| AflII | CTTAAG | 1 cut(s) | 1136 |
| AgeI | ACCGGT | 1 cut(s) | 333 |
| AgsI | TTSAA | 7 cut(s) | 259, 466, 590, 987, 1063, 1170, 1259 |
| AjnI | CCWGG | 5 cut(s) | 28, 351, 552, 861, 1264 |
| AluBI | AGCT | 2 cut(s) | 178, 305 |
| AluI | AGCT | 2 cut(s) | 178, 305 |
| Alw21I | GWGCWC | 1 cut(s) | 616 |
| Alw26I | GTCTC | 6 cut(s) | 322, 520, 819, 894, 1124, 1446 |
| AlwI | GGATC | 5 cut(s) | 185, 198, 351, 387, 801 |
| Ama87I | CYCGRG | 1 cut(s) | 797 |
| Aor13HI | TCCGGA | 1 cut(s) | 193 |
| AoxI | GGCC | 4 cut(s) | 66, 762, 1113, 1455 |
| ApeKI | GCWGC | 6 cut(s) | 221, 283, 571, 883, 1070, 1160 |
| ApoI | RAATTY | 2 cut(s) | 506, 979 |
| AseI | ATTAAT | 1 cut(s) | 228 |
| AsiGI | ACCGGT | 1 cut(s) | 333 |
| AspLEI | GCGC | 2 cut(s) | 477, 628 |
| AspS9I | GGNCC | 2 cut(s) | 734, 1455 |
| AsuC2I | CCSGG | 3 cut(s) | 137, 293, 1384 |
| AsuII | TTCGAA | 1 cut(s) | 1308 |
| AvaI | CYCGRG | 1 cut(s) | 797 |
| AvaII | GGWCC | 1 cut(s) | 734 |
| BamHI | GGATCC | 1 cut(s) | 190 |
| BanII | GRGCYC | 1 cut(s) | 778 |
| BbrPI | CACGTG | 1 cut(s) | 121 |
| Bbv12I | GWGCWC | 1 cut(s) | 616 |
| BbvCI | CCTCAGC | 1 cut(s) | 888 |
| BbvI | GCAGC | 6 cut(s) | 233, 295, 583, 895, 1057, 1147 |
| BccI | CCATC | 4 cut(s) | 323, 451, 725, 762 |
| BceAI | ACGGC | 3 cut(s) | 693, 1128, 1310 |
| BcgI | CGANNNNNNTGC | 4 cut(s) | 832, 866, 944, 978 |
| BciT130I | CCWGG | 5 cut(s) | 30, 353, 554, 863, 1266 |
| BcnI | CCSGG | 3 cut(s) | 137, 293, 1384 |
| BcoDI | GTCTC | 6 cut(s) | 322, 520, 819, 894, 1124, 1446 |
| BfaI | CTAG | 1 cut(s) | 537 |
| BfrI | CTTAAG | 1 cut(s) | 1136 |
| BfuAI | ACCTGC | 1 cut(s) | 1213 |
| BglII | AGATCT | 2 cut(s) | 491, 1148 |
| BisI | GCNGC | 6 cut(s) | 222, 284, 572, 884, 1071, 1161 |
| BlpI | GCTNAGC | 1 cut(s) | 777 |
| BlsI | GCNGC | 6 cut(s) | 223, 285, 573, 885, 1072, 1162 |
| Bme1390I | CCNGG | 8 cut(s) | 30, 137, 293, 353, 554, 863, 1266, 1384 |
| Bme18I | GGWCC | 1 cut(s) | 734 |
| BmeT110I | CYCGRG | 1 cut(s) | 797 |
| BmgT120I | GGNCC | 2 cut(s) | 734, 1455 |
| BmiI | GGNNCC | 3 cut(s) | 192, 551, 1104 |
| BmrFI | CCNGG | 8 cut(s) | 30, 137, 293, 353, 554, 863, 1266, 1384 |
| BmrI | ACTGGG | 1 cut(s) | 554 |
| BmsI | GCATC | 4 cut(s) | 558, 589, 774, 844 |
| BmuI | ACTGGG | 1 cut(s) | 554 |
| Bpu10I | CCTNAGC | 3 cut(s) | 693, 888, 1415 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 777 |
| Bpu14I | TTCGAA | 1 cut(s) | 1308 |
| BpuEI | CTTGAG | 2 cut(s) | 743, 773 |
| BpuMI | CCSGG | 3 cut(s) | 137, 293, 1384 |
| BsaAI | YACGTR | 1 cut(s) | 121 |
| BsaBI | GATNNNNATC | 3 cut(s) | 603, 753, 1193 |
| BsaI | GGTCTC | 4 cut(s) | 520, 819, 894, 1124 |
| BsaJI | CCNNGG | 9 cut(s) | 351, 553, 652, 687, 862, 1182, 1265, 1326, 1451 |
| BsaWI | WCCGGW | 3 cut(s) | 193, 333, 1002 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 816, 846 |
| Bsc4I | CCNNNNNNNGG | 6 cut(s) | 340, 559, 760, 771, 1140, 1245 |
| Bse118I | RCCGGY | 3 cut(s) | 333, 718, 922 |
| Bse1I | ACTGG | 2 cut(s) | 549, 1369 |
| Bse8I | GATNNNNATC | 3 cut(s) | 603, 753, 1193 |
| BseAI | TCCGGA | 1 cut(s) | 193 |
| BseBI | CCWGG | 5 cut(s) | 30, 353, 554, 863, 1266 |
| BseDI | CCNNGG | 9 cut(s) | 351, 553, 652, 687, 862, 1182, 1265, 1326, 1451 |
| BseGI | GGATG | 5 cut(s) | 369, 412, 462, 736, 1392 |
| BseJI | GATNNNNATC | 3 cut(s) | 603, 753, 1193 |
| BseLI | CCNNNNNNNGG | 6 cut(s) | 340, 559, 760, 771, 1140, 1245 |
| BseMII | CTCAG | 8 cut(s) | 509, 791, 795, 902, 962, 1034, 1119, 1429 |
| BseNI | ACTGG | 2 cut(s) | 549, 1369 |
| BseXI | GCAGC | 6 cut(s) | 233, 295, 583, 895, 1057, 1147 |
| BseYI | CCCAGC | 1 cut(s) | 1352 |
| Bsh1236I | CGCG | 2 cut(s) | 831, 998 |
| BshFI | GGCC | 4 cut(s) | 68, 764, 1115, 1457 |
| BshTI | ACCGGT | 1 cut(s) | 333 |
| BsiHKAI | GWGCWC | 1 cut(s) | 616 |
| BsiHKCI | CYCGRG | 1 cut(s) | 797 |
| BslFI | GGGAC | 6 cut(s) | 118, 119, 251, 343, 757, 1028 |
| BslI | CCNNNNNNNGG | 6 cut(s) | 340, 559, 760, 771, 1140, 1245 |
| BsmAI | GTCTC | 6 cut(s) | 322, 520, 819, 894, 1124, 1446 |
| BsmFI | GGGAC | 6 cut(s) | 118, 119, 251, 343, 757, 1028 |
| BsmI | GAATGC | 2 cut(s) | 25, 1162 |
| BsnI | GGCC | 4 cut(s) | 68, 764, 1115, 1457 |
| Bso31I | GGTCTC | 4 cut(s) | 520, 819, 894, 1124 |
| BsoBI | CYCGRG | 1 cut(s) | 797 |
| Bsp119I | TTCGAA | 1 cut(s) | 1308 |
| Bsp1286I | GDGCHC | 2 cut(s) | 616, 778 |
| Bsp13I | TCCGGA | 1 cut(s) | 193 |
| Bsp143I | GATC | 7 cut(s) | 190, 343, 379, 491, 793, 1148, 1194 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 777 |
| Bsp68I | TCGCGA | 1 cut(s) | 998 |
| BspACI | CCGC | 7 cut(s) | 26, 209, 296, 486, 706, 728, 829 |
| BspANI | GGCC | 4 cut(s) | 68, 764, 1115, 1457 |
| BspCNI | CTCAG | 8 cut(s) | 508, 790, 796, 901, 961, 1033, 1120, 1428 |
| BspEI | TCCGGA | 1 cut(s) | 193 |
| BspFNI | CGCG | 2 cut(s) | 831, 998 |
| BspLI | GGNNCC | 3 cut(s) | 192, 551, 1104 |
| BspMI | ACCTGC | 1 cut(s) | 1213 |
| BspPI | GGATC | 5 cut(s) | 185, 198, 351, 387, 801 |
| BspT104I | TTCGAA | 1 cut(s) | 1308 |
| BspTI | CTTAAG | 1 cut(s) | 1136 |
| BspTNI | GGTCTC | 4 cut(s) | 520, 819, 894, 1124 |
| BsrFI | RCCGGY | 3 cut(s) | 333, 718, 922 |
| BsrI | ACTGG | 2 cut(s) | 549, 1369 |
| BssAI | RCCGGY | 3 cut(s) | 333, 718, 922 |
| BssECI | CCNNGG | 9 cut(s) | 351, 553, 652, 687, 862, 1182, 1265, 1326, 1451 |
| BssMI | GATC | 7 cut(s) | 190, 343, 379, 491, 793, 1148, 1194 |
| BssT1I | CCWWGG | 1 cut(s) | 1451 |
| Bst2UI | CCWGG | 5 cut(s) | 30, 353, 554, 863, 1266 |
| Bst4CI | ACNGT | 3 cut(s) | 149, 1379, 1440 |
| Bst6I | CTCTTC | 2 cut(s) | 1305, 1403 |
| BstAFI | CTTAAG | 1 cut(s) | 1136 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 599 |
| BstBAI | YACGTR | 1 cut(s) | 121 |
| BstBI | TTCGAA | 1 cut(s) | 1308 |
| BstC8I | GCNNGC | 4 cut(s) | 720, 916, 920, 924 |
| BstDSI | CCRYGG | 1 cut(s) | 1326 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 769 |
| BstF5I | GGATG | 5 cut(s) | 369, 412, 462, 736, 1392 |
| BstFNI | CGCG | 2 cut(s) | 831, 998 |
| BstHHI | GCGC | 2 cut(s) | 477, 628 |
| BstKTI | GATC | 7 cut(s) | 193, 346, 382, 494, 796, 1151, 1197 |
| BstMAI | GTCTC | 6 cut(s) | 322, 520, 819, 894, 1124, 1446 |
| BstMBI | GATC | 7 cut(s) | 190, 343, 379, 491, 793, 1148, 1194 |
| BstMWI | GCNNNNNNNGC | 6 cut(s) | 302, 311, 599, 889, 1322, 1358 |
| BstNI | CCWGG | 5 cut(s) | 30, 353, 554, 863, 1266 |
| BstSCI | CCNGG | 8 cut(s) | 28, 135, 291, 351, 552, 861, 1264, 1382 |
| BstUI | CGCG | 2 cut(s) | 831, 998 |
| BstV1I | GCAGC | 6 cut(s) | 233, 295, 583, 895, 1057, 1147 |
| BstX2I | RGATCY | 5 cut(s) | 190, 379, 491, 793, 1148 |
| BstYI | RGATCY | 5 cut(s) | 190, 379, 491, 793, 1148 |
| BsuRI | GGCC | 4 cut(s) | 68, 764, 1115, 1457 |
| BtgI | CCRYGG | 1 cut(s) | 1326 |
| BtgZI | GCGATG | 1 cut(s) | 1306 |
| BtsCI | GGATG | 5 cut(s) | 369, 412, 462, 736, 1392 |
| BtsIMutI | CAGTG | 1 cut(s) | 1436 |
| BtuMI | TCGCGA | 1 cut(s) | 998 |
| BveI | ACCTGC | 1 cut(s) | 1213 |
| Cac8I | GCNNGC | 4 cut(s) | 720, 916, 920, 924 |
| CfoI | GCGC | 2 cut(s) | 477, 628 |
| Cfr10I | RCCGGY | 3 cut(s) | 333, 718, 922 |
| Cfr13I | GGNCC | 2 cut(s) | 734, 1455 |
| Csp6I | GTAC | 2 cut(s) | 439, 1223 |
| CspAI | ACCGGT | 1 cut(s) | 333 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 376, 411 |
| CviAII | CATG | 2 cut(s) | 265, 911 |
| CviQI | GTAC | 2 cut(s) | 439, 1223 |
| DpnI | GATC | 7 cut(s) | 192, 345, 381, 493, 795, 1150, 1196 |
| DpnII | GATC | 7 cut(s) | 190, 343, 379, 491, 793, 1148, 1194 |
| EaeI | YGGCCR | 1 cut(s) | 66 |
| Eam1104I | CTCTTC | 2 cut(s) | 1305, 1403 |
| EarI | CTCTTC | 2 cut(s) | 1305, 1403 |
| EciI | GGCGGA | 3 cut(s) | 15, 311, 695 |
| Eco130I | CCWWGG | 1 cut(s) | 1451 |
| Eco147I | AGGCCT | 1 cut(s) | 764 |
| Eco24I | GRGCYC | 1 cut(s) | 778 |
| Eco31I | GGTCTC | 4 cut(s) | 520, 819, 894, 1124 |
| Eco47I | GGWCC | 1 cut(s) | 734 |
| Eco72I | CACGTG | 1 cut(s) | 121 |
| Eco88I | CYCGRG | 1 cut(s) | 797 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 769 |
| EcoO109I | RGGNCCY | 1 cut(s) | 1455 |
| EcoRII | CCWGG | 5 cut(s) | 28, 351, 552, 861, 1264 |
| EcoT14I | CCWWGG | 1 cut(s) | 1451 |
| EcoT38I | GRGCYC | 1 cut(s) | 778 |
| ErhI | CCWWGG | 1 cut(s) | 1451 |
| FaeI | CATG | 2 cut(s) | 268, 914 |
| FaiI | YATR | 6 cut(s) | 14, 156, 266, 768, 912, 1034 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 1067, 1099 |
| FaqI | GGGAC | 6 cut(s) | 118, 119, 251, 343, 757, 1028 |
| FatI | CATG | 2 cut(s) | 264, 910 |
| FauI | CCCGC | 1 cut(s) | 216 |
| Fnu4HI | GCNGC | 6 cut(s) | 222, 284, 572, 884, 1071, 1161 |
| FokI | GGATG | 5 cut(s) | 356, 419, 469, 743, 1399 |
| FriOI | GRGCYC | 1 cut(s) | 778 |
| Fsp4HI | GCNGC | 6 cut(s) | 222, 284, 572, 884, 1071, 1161 |
| FspBI | CTAG | 1 cut(s) | 537 |
| GlaI | GCGC | 2 cut(s) | 476, 627 |
| GluI | GCNGC | 6 cut(s) | 222, 284, 572, 884, 1071, 1161 |
| GsaI | CCCAGC | 1 cut(s) | 1356 |
| HaeIII | GGCC | 4 cut(s) | 68, 764, 1115, 1457 |
| HhaI | GCGC | 2 cut(s) | 477, 628 |
| Hin1II | CATG | 2 cut(s) | 268, 914 |
| Hin6I | GCGC | 2 cut(s) | 475, 626 |
| HinP1I | GCGC | 2 cut(s) | 475, 626 |
| HincII | GTYRAC | 1 cut(s) | 1278 |
| HindII | GTYRAC | 1 cut(s) | 1278 |
| Hpy166II | GTNNAC | 1 cut(s) | 1278 |
| Hpy188I | TCNGA | 9 cut(s) | 38, 80, 161, 343, 656, 688, 805, 1023, 1395 |
| Hpy188III | TCNNGA | 7 cut(s) | 103, 194, 797, 997, 1198, 1256, 1427 |
| Hpy8I | GTNNAC | 1 cut(s) | 1278 |
| HpyAV | CCTTC | 6 cut(s) | 66, 181, 253, 868, 1239, 1393 |
| HpyCH4III | ACNGT | 3 cut(s) | 149, 1379, 1440 |
| HpyCH4IV | ACGT | 1 cut(s) | 120 |
| HpyCH4V | TGCA | 6 cut(s) | 7, 571, 648, 897, 914, 1073 |
| HpyF10VI | GCNNNNNNNGC | 6 cut(s) | 302, 311, 599, 889, 1322, 1358 |
| HpySE526I | ACGT | 1 cut(s) | 120 |
| Hsp92II | CATG | 2 cut(s) | 268, 914 |
| HspAI | GCGC | 2 cut(s) | 475, 626 |
| Kpn2I | TCCGGA | 1 cut(s) | 193 |
| KroI | GCCGGC | 2 cut(s) | 718, 922 |
| KroNI | GCCGGC | 2 cut(s) | 720, 924 |
| Kzo9I | GATC | 7 cut(s) | 190, 343, 379, 491, 793, 1148, 1194 |
| LmnI | GCTCC | 3 cut(s) | 28, 58, 1108 |
| Lsp1109I | GCAGC | 6 cut(s) | 233, 295, 583, 895, 1057, 1147 |
| LweI | GCATC | 4 cut(s) | 558, 589, 774, 844 |
| MaeI | CTAG | 1 cut(s) | 537 |
| MaeII | ACGT | 1 cut(s) | 120 |
| MaeIII | GTNAC | 2 cut(s) | 121, 1177 |
| MalI | GATC | 7 cut(s) | 192, 345, 381, 493, 795, 1150, 1196 |
| MboI | GATC | 7 cut(s) | 190, 343, 379, 491, 793, 1148, 1194 |
| MfeI | CAATTG | 1 cut(s) | 621 |
| MflI | RGATCY | 5 cut(s) | 190, 379, 491, 793, 1148 |
| MhlI | GDGCHC | 2 cut(s) | 616, 778 |
| MluCI | AATT | 7 cut(s) | 229, 506, 621, 876, 979, 1121, 1165 |
| MlyI | GAGTC | 5 cut(s) | 85, 118, 365, 809, 944 |
| MroI | TCCGGA | 1 cut(s) | 193 |
| MroNI | GCCGGC | 2 cut(s) | 718, 922 |
| MseI | TTAA | 4 cut(s) | 228, 425, 714, 1137 |
| MslI | CAYNNNNRTG | 2 cut(s) | 909, 1325 |
| MspA1I | CMGCKG | 2 cut(s) | 178, 211 |
| MspCI | CTTAAG | 1 cut(s) | 1136 |
| MspR9I | CCNGG | 8 cut(s) | 30, 137, 293, 353, 554, 863, 1266, 1384 |
| MunI | CAATTG | 1 cut(s) | 621 |
| Mva1269I | GAATGC | 2 cut(s) | 25, 1162 |
| MvaI | CCWGG | 5 cut(s) | 30, 353, 554, 863, 1266 |
| MvnI | CGCG | 2 cut(s) | 831, 998 |
| MwoI | GCNNNNNNNGC | 6 cut(s) | 302, 311, 599, 889, 1322, 1358 |
| NaeI | GCCGGC | 2 cut(s) | 720, 924 |
| NciI | CCSGG | 3 cut(s) | 137, 293, 1384 |
| NdeII | GATC | 7 cut(s) | 190, 343, 379, 491, 793, 1148, 1194 |
| NgoMIV | GCCGGC | 2 cut(s) | 718, 922 |
| NlaIII | CATG | 2 cut(s) | 268, 914 |
| NlaIV | GGNNCC | 3 cut(s) | 192, 551, 1104 |
| NmeAIII | GCCGAG | 2 cut(s) | 635, 958 |
| NmuCI | GTSAC | 2 cut(s) | 121, 1177 |
| NruI | TCGCGA | 1 cut(s) | 998 |
| NspV | TTCGAA | 1 cut(s) | 1308 |
| PaeR7I | CTCGAG | 1 cut(s) | 797 |
| PceI | AGGCCT | 1 cut(s) | 764 |
| PctI | GAATGC | 2 cut(s) | 25, 1162 |
| PdiI | GCCGGC | 2 cut(s) | 720, 924 |
| PfeI | GAWTC | 6 cut(s) | 445, 657, 681, 700, 749, 1368 |
| PfoI | TCCNGGA | 1 cut(s) | 1382 |
| PinAI | ACCGGT | 1 cut(s) | 333 |
| PkrI | GCNGC | 6 cut(s) | 223, 285, 573, 885, 1072, 1162 |
| PleI | GAGTC | 5 cut(s) | 85, 118, 364, 808, 943 |
| PmaCI | CACGTG | 1 cut(s) | 121 |
| PmlI | CACGTG | 1 cut(s) | 121 |
| PpsI | GAGTC | 5 cut(s) | 85, 118, 364, 808, 943 |
| Ppu21I | YACGTR | 1 cut(s) | 121 |
| PshBI | ATTAAT | 1 cut(s) | 228 |
| Psp6I | CCWGG | 5 cut(s) | 28, 351, 552, 861, 1264 |
| PspCI | CACGTG | 1 cut(s) | 121 |
| PspFI | CCCAGC | 1 cut(s) | 1352 |
| PspGI | CCWGG | 5 cut(s) | 28, 351, 552, 861, 1264 |
| PspN4I | GGNNCC | 3 cut(s) | 192, 551, 1104 |
| PspPI | GGNCC | 2 cut(s) | 734, 1455 |
| PsuI | RGATCY | 5 cut(s) | 190, 379, 491, 793, 1148 |
| PvuII | CAGCTG | 1 cut(s) | 178 |
| RruI | TCGCGA | 1 cut(s) | 998 |
| RsaI | GTAC | 2 cut(s) | 440, 1224 |
| RsaNI | GTAC | 2 cut(s) | 439, 1223 |
| RseI | CAYNNNNRTG | 2 cut(s) | 909, 1325 |
| SaqAI | TTAA | 4 cut(s) | 228, 425, 714, 1137 |
| SatI | GCNGC | 6 cut(s) | 222, 284, 572, 884, 1071, 1161 |
| Sau3AI | GATC | 7 cut(s) | 190, 343, 379, 491, 793, 1148, 1194 |
| Sau96I | GGNCC | 2 cut(s) | 734, 1455 |
| SchI | GAGTC | 5 cut(s) | 85, 118, 365, 809, 944 |
| ScrFI | CCNGG | 8 cut(s) | 30, 137, 293, 353, 554, 863, 1266, 1384 |
| SduI | GDGCHC | 2 cut(s) | 616, 778 |
| SetI | ASST | 9 cut(s) | 123, 180, 307, 444, 516, 555, 654, 1207, 1404 |
| SfaNI | GCATC | 4 cut(s) | 558, 589, 774, 844 |
| Sfr274I | CTCGAG | 1 cut(s) | 797 |
| SfuI | TTCGAA | 1 cut(s) | 1308 |
| SgrAI | CRCCGGYG | 1 cut(s) | 333 |
| SinI | GGWCC | 1 cut(s) | 734 |
| SlaI | CTCGAG | 1 cut(s) | 797 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 909, 1325 |
| SmlI | CTYRAG | 4 cut(s) | 758, 788, 797, 1136 |
| SmoI | CTYRAG | 4 cut(s) | 758, 788, 797, 1136 |
| Sse9I | AATT | 7 cut(s) | 229, 506, 621, 876, 979, 1121, 1165 |
| SseBI | AGGCCT | 1 cut(s) | 764 |
| SsiI | CCGC | 7 cut(s) | 26, 209, 296, 486, 706, 728, 829 |
| SspMI | CTAG | 1 cut(s) | 537 |
| StuI | AGGCCT | 1 cut(s) | 764 |
| StyD4I | CCNGG | 8 cut(s) | 28, 135, 291, 351, 552, 861, 1264, 1382 |
| StyI | CCWWGG | 1 cut(s) | 1451 |
| TaaI | ACNGT | 3 cut(s) | 149, 1379, 1440 |
| TaiI | ACGT | 1 cut(s) | 123 |
| TaqI | TCGA | 5 cut(s) | 86, 309, 798, 852, 1308 |
| TaqII | GACCGA | 1 cut(s) | 1196 |
| TasI | AATT | 7 cut(s) | 229, 506, 621, 876, 979, 1121, 1165 |
| TfiI | GAWTC | 6 cut(s) | 445, 657, 681, 700, 749, 1368 |
| Tru1I | TTAA | 4 cut(s) | 228, 425, 714, 1137 |
| Tru9I | TTAA | 4 cut(s) | 228, 425, 714, 1137 |
| TscAI | CASTG | 1 cut(s) | 1443 |
| TseFI | GTSAC | 2 cut(s) | 121, 1177 |
| TseI | GCWGC | 6 cut(s) | 221, 283, 571, 883, 1070, 1160 |
| Tsp45I | GTSAC | 2 cut(s) | 121, 1177 |
| TspDTI | ATGAA | 4 cut(s) | 293, 683, 827, 1084 |
| TspGWI | ACGGA | 2 cut(s) | 122, 483 |
| TspRI | CASTG | 1 cut(s) | 1443 |
| Vha464I | CTTAAG | 1 cut(s) | 1136 |
| VpaK11BI | GGWCC | 1 cut(s) | 734 |
| VspI | ATTAAT | 1 cut(s) | 228 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 769 |
| XapI | RAATTY | 2 cut(s) | 506, 979 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 541 |
| XhoI | CTCGAG | 1 cut(s) | 797 |
| XspI | CTAG | 1 cut(s) | 537 |