Rh2DG130700

Tetratricopeptide repeat

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2D
OG0011032
Physical Location & Seq
Reverse (-)
11027629 .. 11029865
2237 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2DG130700.1

Sequence Viewer

Length: 1455 bp
ATGATGCAAGATATGTGGAATGCTCCACCGGGTTTCAGACCCACCAAATCTGCTCCTTCCTCTCCGGCCAAGCCTCTAGGAGTTTCGAGGACTCGGTCCGAGTCGTTCCATGTGACTCACAAGGTGCCAGTGGGGGACACTCCTTACGTTAGAGCCAAGAATGTTCAGCTGGTGGATAAGGATCCAGAGAGGGCTATTCCTCTGTTCTGGGCGGCCATTAATTCTGGGGATAGAGTTGACAGTGCTCTCAAGGACATGGCCATTGTGATGAAGCAACAGAATAGGGCTGAGGAAGCCATTGAAGCCATCAAGTCATTGAGACATCGATGTTCGGATCAAGCCCAGGAGTCACTTGACAACATTCTATTGGATCTTTACAAGAGATGTGGAAGATTGGATGATCAAATAGCACTTTTGAGGCACAAGTTGTTCTTGATTCAACAAGGAATGGCTTTCAATGGAAAACGTACCAAAACTGCCAGATCTCAAGGGAAGAAATTTCAAGTCTCTGTGGAACAAGAAGCCACTAGATTACTGGGGAATTTGGGGTGGGCTTTGATGCAGCAGAACAACTACATTGAAGCCGAAGATGCATACCGGCGAGCACTAACTATAGCACCAGACAACAACAAAATGTGCAATCTCGGAATCTGCTTAATGAAGCAAGGAAGAATCTCGGAGGCTAAAGAGAATCTCCGGCGAGTCAAGCCTGCCGTGGCTGATGGGCCAAGAGGAACAGATTCACATCTTAAAGCCTATGAAAGGGCGCAGCAAATGCTCAAGGACTTAGAGTCTGAGATGATGAACAAGGGTCTGGACCGGGTAGAGCAGAGCCGGCTTTTCGATGCCTTTCTTGGGTCCTCATCGATTTGGCAGCCCCAGCCTTGCAGAGACAATCACCACACCACATTGCCTCCAGTGGAATCTGTCAAAATCGATGAGTTTGCGGACGAAAACATCAACTCCTTGCTGCTAACTCAGCCCAGAACCAAAGTTCTGCCTCCCCTTGGAAACAACAACGCACTTAACTCACTGAATTGTGCTGCACAGCCTTTTTACTCAAAGCTCATTCCTGGTCCAATAGGGAATGATGGTTCTCAATCTCAATGTGCTGAGACCCTTAAGAGGACTAGGTCTGGGAATGCTGCCAATATGAGAGTGACTGATGCAATTGAGATCCCAACAAAGCCTACTGTGGAGTTGGGTGTACCGGAAAACAAGACTCGAAGAAGGCTGTCACTTGAGGAAAATGAAGAGAACAAATTGGCTCAGTTTTTGCCTGATAGCAAGGACTTTGAAGAGGCCATCATTGCTGCTGTGATTGACCCAACAAATGAAGCAGCGAAGGCGATTGGCAATGGAAACAATTCGGGGATGTTTCCAAAGAAGATTGAGAAGAGGCTCAGGGTATTTCAAGACATTACTCTCTCTTTAAGTCCGAGGGCAAGGGCCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0009507 GO:0009536 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
TPR_1 TPR_19 TPR_2 TPR_8

Protein Analysis

484

Amino Acids

54.04

Weight (kDa)

9.15

Isoelectric Point (pI)

51.81

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
TPR_1 PF00515 178 - 209 3.6e-08 Tetratricopeptide repeat
TPR_2 PF07719 178 - 209 2e-07 Tetratricopeptide repeat
TPR_19 PF14559 186 - 244 1.3e-06 Tetratricopeptide repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0011032)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G51280
fragaria_vesca FvH4_1g11500 FvH4_1g11500
malus_domestica MD02G1127900.v1.1 MD15G1243100.v1.1
prunus_persica Prupe.7G171000_v2.0.a1
pyrus_communis pycom02g10000 pycom15g21420
rosa_chinensis RchiOBHm_Chr2g0099121
rosa_laevigata RLG00000016850
rosa_multiflora Rmu_sc0009113.1_g000006 Rmu_sc0012098.1_g000002 Rmu_sc0034643.1_g000001
rosa_roxburghii Rroxscaffold_2G00143420
rosa_rugosa Rorug02G0076900
rosa_samantha Rh2AG126000 Rh2BG129300 Rh2CG130300 Rh2DG130700
rosa_wichuraiana Rw2G009710

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 124
AciI CCGC 2 cut(s) 212, 947
AclWI GGATC 5 cut(s) 176, 189, 342, 378, 1171
AcoI YGGCCR 3 cut(s) 66, 213, 258
AcsI RAATTY 2 cut(s) 497, 541
AdeI CACNNNGTG 1 cut(s) 124
AfaI GTAC 2 cut(s) 469, 1209
AfiI CCNNNNNNNGG 4 cut(s) 762, 855, 1007, 1125
AflII CTTAAG 1 cut(s) 1121
AgsI TTSAA 7 cut(s) 302, 440, 457, 503, 581, 1298, 1415
AhdI GACNNNNNGTC 1 cut(s) 790
AjnI CCWGG 2 cut(s) 342, 1072
AloI GAACNNNNNNTCC 2 cut(s) 1078, 1110
AluBI AGCT 2 cut(s) 169, 1066
AluI AGCT 2 cut(s) 169, 1066
Alw21I GWGCWC 2 cut(s) 247, 607
Alw26I GTCTC 4 cut(s) 313, 511, 885, 1109
AlwI GGATC 5 cut(s) 176, 189, 342, 378, 1171
AoxI GGCC 6 cut(s) 66, 213, 258, 725, 1302, 1449
ApeKI GCWGC 8 cut(s) 562, 769, 874, 970, 1043, 1145, 1313, 1340
ApoI RAATTY 2 cut(s) 497, 541
AseI ATTAAT 1 cut(s) 219
Asp700I GAANNNNTTC 2 cut(s) 739, 1366
AspLEI GCGC 1 cut(s) 769
AspS9I GGNCC 6 cut(s) 96, 725, 817, 858, 1076, 1449
AsuC2I CCSGG 2 cut(s) 30, 821
AsuHPI GGTGA 1 cut(s) 890
AvaII GGWCC 4 cut(s) 96, 817, 858, 1076
BalI TGGCCA 1 cut(s) 260
BamHI GGATCC 1 cut(s) 181
BanI GGYRCC 1 cut(s) 124
Bbv12I GWGCWC 2 cut(s) 247, 607
BbvCI CCTCAGC 1 cut(s) 288
BbvI GCAGC 8 cut(s) 574, 781, 886, 957, 1030, 1132, 1300, 1352
BccI CCATC 4 cut(s) 314, 716, 1085, 1313
BceAI ACGGC 1 cut(s) 698
BcgI CGANNNNNNTGC 2 cut(s) 926, 960
BciT130I CCWGG 2 cut(s) 344, 1074
BclI TGATCA 1 cut(s) 400
BcnI CCSGG 2 cut(s) 30, 821
BcoDI GTCTC 4 cut(s) 313, 511, 885, 1109
BfaI CTAG 3 cut(s) 77, 528, 1131
BfmI CTRYAG 1 cut(s) 612
BfrI CTTAAG 1 cut(s) 1121
BglII AGATCT 1 cut(s) 482
BisI GCNGC 9 cut(s) 213, 563, 770, 875, 971, 1044, 1146, 1314, 1341
BlsI GCNGC 9 cut(s) 214, 564, 771, 876, 972, 1045, 1147, 1315, 1342
Bme1390I CCNGG 4 cut(s) 30, 344, 821, 1074
Bme18I GGWCC 4 cut(s) 96, 817, 858, 1076
BmeRI GACNNNNNGTC 1 cut(s) 790
BmgT120I GGNCC 6 cut(s) 96, 725, 817, 858, 1076, 1449
BmiI GGNNCC 3 cut(s) 126, 183, 859
BmrFI CCNGG 4 cut(s) 30, 344, 821, 1074
BmrI ACTGGG 1 cut(s) 545
BmsI GCATC 4 cut(s) 549, 580, 835, 1156
BmuI ACTGGG 1 cut(s) 545
BpmI CTGGAG 1 cut(s) 900
Bpu10I CCTNAGC 2 cut(s) 288, 1403
BpuEI CTTGAG 4 cut(s) 233, 471, 764, 1262
BpuMI CCSGG 2 cut(s) 30, 821
Bsa29I ATCGAT 3 cut(s) 325, 866, 936
BsaBI GATNNNNATC 2 cut(s) 180, 744
BsaI GGTCTC 1 cut(s) 1109
BsaJI CCNNGG 4 cut(s) 342, 714, 1006, 1439
BsaWI WCCGGW 1 cut(s) 1210
BsaXI ACNNNNNCTCC 4 cut(s) 898, 928, 947, 977
Bsc4I CCNNNNNNNGG 4 cut(s) 762, 855, 1007, 1125
Bse118I RCCGGY 2 cut(s) 597, 834
Bse1I ACTGG 3 cut(s) 128, 540, 917
Bse3DI GCAATG 3 cut(s) 908, 1308, 1363
Bse8I GATNNNNATC 2 cut(s) 180, 744
BseBI CCWGG 2 cut(s) 344, 1074
BseCI ATCGAT 3 cut(s) 325, 866, 936
BseDI CCNNGG 4 cut(s) 342, 714, 1006, 1439
BseGI GGATG 2 cut(s) 403, 1380
BseJI GATNNNNATC 2 cut(s) 180, 744
BseLI CCNNNNNNNGG 4 cut(s) 762, 855, 1007, 1125
BseMI GCAATG 3 cut(s) 908, 1308, 1363
BseMII CTCAG 6 cut(s) 279, 786, 992, 1104, 1283, 1417
BseNI ACTGG 3 cut(s) 128, 540, 917
BseXI GCAGC 8 cut(s) 574, 781, 886, 957, 1030, 1132, 1300, 1352
BseYI CCCAGC 1 cut(s) 879
BsgI GTGCAG 1 cut(s) 1029
BshFI GGCC 6 cut(s) 68, 215, 260, 727, 1304, 1451
BshNI GGYRCC 1 cut(s) 124
BshVI ATCGAT 3 cut(s) 325, 866, 936
BsiHKAI GWGCWC 2 cut(s) 247, 607
BsiSI CCGG 7 cut(s) 29, 65, 598, 697, 820, 835, 1211
BslFI GGGAC 1 cut(s) 149
BslI CCNNNNNNNGG 4 cut(s) 762, 855, 1007, 1125
BsmAI GTCTC 4 cut(s) 313, 511, 885, 1109
BsmFI GGGAC 1 cut(s) 149
BsmI GAATGC 2 cut(s) 25, 1147
BsnI GGCC 6 cut(s) 68, 215, 260, 727, 1304, 1451
Bso31I GGTCTC 1 cut(s) 1109
Bsp1286I GDGCHC 2 cut(s) 247, 607
Bsp143I GATC 6 cut(s) 181, 334, 370, 400, 482, 1176
BspACI CCGC 2 cut(s) 212, 947
BspANI GGCC 6 cut(s) 68, 215, 260, 727, 1304, 1451
BspCNI CTCAG 6 cut(s) 280, 787, 991, 1105, 1282, 1416
BspDI ATCGAT 3 cut(s) 325, 866, 936
BspLI GGNNCC 3 cut(s) 126, 183, 859
BspPI GGATC 5 cut(s) 176, 189, 342, 378, 1171
BspT107I GGYRCC 1 cut(s) 124
BspTI CTTAAG 1 cut(s) 1121
BspTNI GGTCTC 1 cut(s) 1109
BsrDI GCAATG 3 cut(s) 908, 1308, 1363
BsrFI RCCGGY 2 cut(s) 597, 834
BsrI ACTGG 3 cut(s) 128, 540, 917
BssAI RCCGGY 2 cut(s) 597, 834
BssECI CCNNGG 4 cut(s) 342, 714, 1006, 1439
BssMI GATC 6 cut(s) 181, 334, 370, 400, 482, 1176
BssT1I CCWWGG 1 cut(s) 1006
Bst2UI CCWGG 2 cut(s) 344, 1074
Bst4CI ACNGT 2 cut(s) 242, 1195
Bst6I CTCTTC 3 cut(s) 1248, 1293, 1391
BstAFI CTTAAG 1 cut(s) 1121
BstAPI GCANNNNNTGC 1 cut(s) 775
BstC8I GCNNGC 3 cut(s) 603, 711, 836
BstDEI CTNAG 7 cut(s) 288, 787, 795, 978, 1113, 1269, 1403
BstDSI CCRYGG 1 cut(s) 714
BstENI CCTNNNNNAGG 1 cut(s) 760
BstF5I GGATG 2 cut(s) 403, 1380
BstHHI GCGC 1 cut(s) 769
BstKTI GATC 6 cut(s) 184, 337, 373, 403, 485, 1179
BstMAI GTCTC 4 cut(s) 313, 511, 885, 1109
BstMBI GATC 6 cut(s) 181, 334, 370, 400, 482, 1176
BstNI CCWGG 2 cut(s) 344, 1074
BstSCI CCNGG 4 cut(s) 28, 342, 819, 1072
BstSFI CTRYAG 1 cut(s) 612
BstV1I GCAGC 8 cut(s) 574, 781, 886, 957, 1030, 1132, 1300, 1352
BstX2I RGATCY 4 cut(s) 181, 370, 482, 1176
BstYI RGATCY 4 cut(s) 181, 370, 482, 1176
Bsu15I ATCGAT 3 cut(s) 325, 866, 936
BsuRI GGCC 6 cut(s) 68, 215, 260, 727, 1304, 1451
BsuTUI ATCGAT 3 cut(s) 325, 866, 936
BtgI CCRYGG 1 cut(s) 714
BtsCI GGATG 2 cut(s) 403, 1380
BtsIMutI CAGTG 4 cut(s) 135, 247, 924, 1031
Cac8I GCNNGC 3 cut(s) 603, 711, 836
CfoI GCGC 1 cut(s) 769
Cfr10I RCCGGY 2 cut(s) 597, 834
Cfr13I GGNCC 6 cut(s) 96, 725, 817, 858, 1076, 1449
ClaI ATCGAT 3 cut(s) 325, 866, 936
CpoI CGGWCCG 1 cut(s) 96
Csp6I GTAC 2 cut(s) 468, 1208
CspCI CAANNNNNGTGG 3 cut(s) 31, 367, 402
CspI CGGWCCG 1 cut(s) 96
CviAII CATG 2 cut(s) 110, 256
CviQI GTAC 2 cut(s) 468, 1208
DdeI CTNAG 7 cut(s) 288, 787, 795, 978, 1113, 1269, 1403
DpnI GATC 6 cut(s) 183, 336, 372, 402, 484, 1178
DpnII GATC 6 cut(s) 181, 334, 370, 400, 482, 1176
DraIII CACNNNGTG 1 cut(s) 124
DriI GACNNNNNGTC 1 cut(s) 790
EaeI YGGCCR 3 cut(s) 66, 213, 258
Eam1104I CTCTTC 3 cut(s) 1248, 1293, 1391
Eam1105I GACNNNNNGTC 1 cut(s) 790
EarI CTCTTC 3 cut(s) 1248, 1293, 1391
Eco130I CCWWGG 1 cut(s) 1006
Eco31I GGTCTC 1 cut(s) 1109
Eco47I GGWCC 4 cut(s) 96, 817, 858, 1076
EcoNI CCTNNNNNAGG 1 cut(s) 760
EcoO109I RGGNCCY 2 cut(s) 858, 1449
EcoRII CCWGG 2 cut(s) 342, 1072
EcoT14I CCWWGG 1 cut(s) 1006
EcoT22I ATGCAT 1 cut(s) 595
ErhI CCWWGG 1 cut(s) 1006
FaeI CATG 2 cut(s) 113, 259
FaiI YATR 7 cut(s) 14, 111, 257, 595, 614, 759, 1154
FalI AAGNNNNNCTT 2 cut(s) 416, 448
FaqI GGGAC 1 cut(s) 149
FatI CATG 2 cut(s) 109, 255
FbaI TGATCA 1 cut(s) 400
Fnu4HI GCNGC 9 cut(s) 213, 563, 770, 875, 971, 1044, 1146, 1314, 1341
FokI GGATG 2 cut(s) 410, 1387
Fsp4HI GCNGC 9 cut(s) 213, 563, 770, 875, 971, 1044, 1146, 1314, 1341
FspBI CTAG 3 cut(s) 77, 528, 1131
GlaI GCGC 1 cut(s) 768
GluI GCNGC 9 cut(s) 213, 563, 770, 875, 971, 1044, 1146, 1314, 1341
GsaI CCCAGC 1 cut(s) 883
GsuI CTGGAG 1 cut(s) 900
HaeIII GGCC 6 cut(s) 68, 215, 260, 727, 1304, 1451
HapII CCGG 7 cut(s) 29, 65, 598, 697, 820, 835, 1211
HhaI GCGC 1 cut(s) 769
Hin1II CATG 2 cut(s) 113, 259
Hin6I GCGC 1 cut(s) 767
HinP1I GCGC 1 cut(s) 767
HincII GTYRAC 1 cut(s) 238
HindII GTYRAC 1 cut(s) 238
HpaII CCGG 7 cut(s) 29, 65, 598, 697, 820, 835, 1211
HphI GGTGA 1 cut(s) 890
Hpy166II GTNNAC 2 cut(s) 238, 1208
Hpy188I TCNGA 7 cut(s) 38, 100, 334, 647, 679, 796, 1440
Hpy188III TCNNGA 4 cut(s) 185, 433, 815, 1415
Hpy8I GTNNAC 2 cut(s) 238, 1208
HpyAV CCTTC 3 cut(s) 66, 1224, 1339
HpyCH4III ACNGT 2 cut(s) 242, 1195
HpyCH4IV ACGT 2 cut(s) 147, 466
HpyCH4V TGCA 7 cut(s) 7, 562, 593, 639, 888, 1046, 1169
HpyF3I CTNAG 7 cut(s) 288, 787, 795, 978, 1113, 1269, 1403
HpySE526I ACGT 2 cut(s) 147, 466
Hsp92II CATG 2 cut(s) 113, 259
HspAI GCGC 1 cut(s) 767
KroI GCCGGC 1 cut(s) 834
KroNI GCCGGC 1 cut(s) 836
Ksp22I TGATCA 1 cut(s) 400
Kzo9I GATC 6 cut(s) 181, 334, 370, 400, 482, 1176
LmnI GCTCC 2 cut(s) 28, 58
Lsp1109I GCAGC 8 cut(s) 574, 781, 886, 957, 1030, 1132, 1300, 1352
LweI GCATC 4 cut(s) 549, 580, 835, 1156
MaeI CTAG 3 cut(s) 77, 528, 1131
MaeII ACGT 2 cut(s) 147, 466
MaeIII GTNAC 4 cut(s) 112, 348, 1159, 1236
MalI GATC 6 cut(s) 183, 336, 372, 402, 484, 1178
MboI GATC 6 cut(s) 181, 334, 370, 400, 482, 1176
MboII GAAGA 9 cut(s) 402, 505, 599, 681, 1239, 1265, 1310, 1399, 1408
MfeI CAATTG 1 cut(s) 1170
MflI RGATCY 4 cut(s) 181, 370, 482, 1176
MhlI GDGCHC 2 cut(s) 247, 607
MlsI TGGCCA 1 cut(s) 260
MluCI AATT 7 cut(s) 220, 497, 541, 1036, 1170, 1262, 1366
MluNI TGGCCA 1 cut(s) 260
MlyI GAGTC 7 cut(s) 85, 109, 110, 356, 711, 800, 1216
Mox20I TGGCCA 1 cut(s) 260
Mph1103I ATGCAT 1 cut(s) 595
MroNI GCCGGC 1 cut(s) 834
MroXI GAANNNNTTC 2 cut(s) 739, 1366
MscI TGGCCA 1 cut(s) 260
MseI TTAA 6 cut(s) 219, 656, 750, 1026, 1122, 1433
MslI CAYNNNNRTG 1 cut(s) 266
Msp20I TGGCCA 1 cut(s) 260
MspA1I CMGCKG 1 cut(s) 169
MspCI CTTAAG 1 cut(s) 1121
MspI CCGG 7 cut(s) 29, 65, 598, 697, 820, 835, 1211
MspR9I CCNGG 4 cut(s) 30, 344, 821, 1074
MunI CAATTG 1 cut(s) 1170
Mva1269I GAATGC 2 cut(s) 25, 1147
MvaI CCWGG 2 cut(s) 344, 1074
NaeI GCCGGC 1 cut(s) 836
NciI CCSGG 2 cut(s) 30, 821
NdeII GATC 6 cut(s) 181, 334, 370, 400, 482, 1176
NgoMIV GCCGGC 1 cut(s) 834
NlaIII CATG 2 cut(s) 113, 259
NlaIV GGNNCC 3 cut(s) 126, 183, 859
NmuCI GTSAC 4 cut(s) 112, 348, 1159, 1236
NsiI ATGCAT 1 cut(s) 595
PctI GAATGC 2 cut(s) 25, 1147
PdiI GCCGGC 1 cut(s) 836
PdmI GAANNNNTTC 2 cut(s) 739, 1366
PfeI GAWTC 6 cut(s) 436, 648, 672, 691, 740, 923
PflFI GACNNNGTC 2 cut(s) 94, 1132
PkrI GCNGC 9 cut(s) 214, 564, 771, 876, 972, 1045, 1147, 1315, 1342
PleI GAGTC 7 cut(s) 85, 109, 109, 355, 710, 799, 1216
PpsI GAGTC 7 cut(s) 85, 109, 109, 355, 710, 799, 1216
PpuMI RGGWCCY 1 cut(s) 858
PshBI ATTAAT 1 cut(s) 219
Psp5II RGGWCCY 1 cut(s) 858
Psp6I CCWGG 2 cut(s) 342, 1072
PspFI CCCAGC 1 cut(s) 879
PspGI CCWGG 2 cut(s) 342, 1072
PspN4I GGNNCC 3 cut(s) 126, 183, 859
PspPI GGNCC 6 cut(s) 96, 725, 817, 858, 1076, 1449
PspPPI RGGWCCY 1 cut(s) 858
PsuI RGATCY 4 cut(s) 181, 370, 482, 1176
PsyI GACNNNGTC 2 cut(s) 94, 1132
PvuII CAGCTG 1 cut(s) 169
RsaI GTAC 2 cut(s) 469, 1209
RsaNI GTAC 2 cut(s) 468, 1208
RseI CAYNNNNRTG 1 cut(s) 266
Rsr2I CGGWCCG 1 cut(s) 96
RsrII CGGWCCG 1 cut(s) 96
SaqAI TTAA 6 cut(s) 219, 656, 750, 1026, 1122, 1433
SatI GCNGC 9 cut(s) 213, 563, 770, 875, 971, 1044, 1146, 1314, 1341
Sau3AI GATC 6 cut(s) 181, 334, 370, 400, 482, 1176
Sau96I GGNCC 6 cut(s) 96, 725, 817, 858, 1076, 1449
SchI GAGTC 7 cut(s) 85, 109, 110, 356, 711, 800, 1216
ScrFI CCNGG 4 cut(s) 30, 344, 821, 1074
SduI GDGCHC 2 cut(s) 247, 607
SetI ASST 6 cut(s) 126, 150, 171, 469, 1068, 1136
SfaNI GCATC 4 cut(s) 549, 580, 835, 1156
SfcI CTRYAG 1 cut(s) 612
SinI GGWCC 4 cut(s) 96, 817, 858, 1076
SmiMI CAYNNNNRTG 1 cut(s) 266
SmlI CTYRAG 5 cut(s) 248, 486, 779, 1121, 1241
SmoI CTYRAG 5 cut(s) 248, 486, 779, 1121, 1241
Sse9I AATT 7 cut(s) 220, 497, 541, 1036, 1170, 1262, 1366
SsiI CCGC 2 cut(s) 212, 947
SspMI CTAG 3 cut(s) 77, 528, 1131
StyD4I CCNGG 4 cut(s) 28, 342, 819, 1072
StyI CCWWGG 1 cut(s) 1006
TaaI ACNGT 2 cut(s) 242, 1195
TaiI ACGT 2 cut(s) 150, 469
TaqI TCGA 6 cut(s) 86, 325, 843, 866, 936, 1225
TaqII GACCGA 1 cut(s) 84
TasI AATT 7 cut(s) 220, 497, 541, 1036, 1170, 1262, 1366
TauI GCSGC 1 cut(s) 215
TfiI GAWTC 6 cut(s) 436, 648, 672, 691, 740, 923
Tru1I TTAA 6 cut(s) 219, 656, 750, 1026, 1122, 1433
Tru9I TTAA 6 cut(s) 219, 656, 750, 1026, 1122, 1433
TscAI CASTG 4 cut(s) 135, 247, 924, 1038
TseFI GTSAC 4 cut(s) 112, 348, 1159, 1236
TseI GCWGC 8 cut(s) 562, 769, 874, 970, 1043, 1145, 1313, 1340
Tsp45I GTSAC 4 cut(s) 112, 348, 1159, 1236
TspDTI ATGAA 6 cut(s) 284, 674, 774, 818, 1266, 1350
TspRI CASTG 4 cut(s) 135, 247, 924, 1038
Tth111I GACNNNGTC 2 cut(s) 94, 1132
Vha464I CTTAAG 1 cut(s) 1121
VpaK11BI GGWCC 4 cut(s) 96, 817, 858, 1076
VspI ATTAAT 1 cut(s) 219
XagI CCTNNNNNAGG 1 cut(s) 760
XapI RAATTY 2 cut(s) 497, 541
XcmI CCANNNNNNNNNTGG 1 cut(s) 532
XmnI GAANNNNTTC 2 cut(s) 739, 1366
XspI CTAG 3 cut(s) 77, 528, 1131
Zsp2I ATGCAT 1 cut(s) 595
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.