Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr15

Orthogroup ID

OG0013261

Physical Location & Seq

Genomic Coordinates Forward (+)

20516522 .. 20517660

Gene Structure 1139 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD15G1247100.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1119 bp

ATGGCATCCGAAACCGACACCGCCAGATCCGGATCCTTAACCCCCAACGGCTCCGCCCCTGATTCGCCGGAGCACCGCAAGGTCGCTCTAATCACCGGCATCACCGGCCAGGACGGCTCCTACCTCACCGAATTCCTCCTCGACAAAGGCTACGACGTCCACGGCCTGATCCGACGGTCCTCCAACTTCAACACCCAGCGCATCAACCACATCTACATCGACCCCCACAACGCCCACAAGGCCCGCATGAAGCTCCACTACGCCGACCTCACCGACTCCTCCTCCCTCCGCCGCTGGCTCGACATAATCGCCCCCAACGAGGTCTACAACCTCGCCGCCCAATCGCACGTCGCCGTCTCGTTTGAGATCCCCGATTACACCGCCGACGTCGTTGCCACCGGCGCCCTCCGCCTCCTCGAGGCTGTCCGCTCCCACATCGCCGCCACCGGCCGCACCGACATTAAGTACTACCAAGCCGGGTCGTCCGAGATGTTCGGGGCCACCCCGCCTCCTCAGTCCGAAACGACGCCGTTCCACCCCCGATCCCCCTACGCAGTTTCGAAATGCGCGGCGCATTGGTACACCGTGAACTACCGCGAGGCATACGGGCTGTTCGCGTGCAACGGGATTCTGTTCAACCACGAGTCGCCGCGGCGGGGGGAGAATTTCGTGACCCGGAAGATCACCCGGGCCGTGGGTCGGATCAAGGAGGGATTGCAGAGCAAGCTGTTTTTGGGGAATCTGCAGGCGTCGAGGGACTGGGGTTTTGCCGGCGACTACGTGGAGGCGATGTGGATGATGCTGCAGCAGGAGAAGCCGGACGACTACGTGGTGGCGACGGAGGAGTCGCACACGGTGGAGGAGTTCCTGGAGGTGTCGTTTGGGTACGTGGGATTGAACTGGAGAGACCACGTGGTGATCGACAAGAGGTACCTGCGGCCGTCGGAGGTGGATAATCTGAAAGGGGATGCGAGCAAGGCGAAGAAGGTGCTGGGTTGGAAGCCGAAAGTCGGGTTTCAGCAGCTGGTGAAGATGATGGTGGACGAAGACGTTGAATTGGCTAAGAGGGAGAAGGTGCTTGTGGATGCTGGGTACATGGATGCTCAGCAACAGCCTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000902 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0006139 GO:0006725 GO:0006793 GO:0006807 GO:0008150 GO:0008152 GO:0008446 GO:0009058 GO:0009225 GO:0009226 GO:0009653 GO:0009826 GO:0009987 GO:0016043 GO:0016049 GO:0016829 GO:0016835 GO:0016836 GO:0018130 GO:0019438 GO:0032502 GO:0032989 GO:0034641 GO:0034654 GO:0040007 GO:0042350 GO:0042351 GO:0044237 GO:0044238 GO:0044249 GO:0044271 GO:0044281 GO:0044424 GO:0044444 GO:0044464 GO:0046368 GO:0046483 GO:0048589 GO:0048856 GO:0048869 GO:0055086 GO:0060560 GO:0071704 GO:0071840 GO:1901135 GO:1901137 GO:1901360 GO:1901362 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00051 ko00520 ko01100 map00051 map00520 map01100

Pfam Domains

Protein Families

GDP_Man_Dehyd

Protein Analysis

373

Amino Acids

41.81

Weight (kDa)

6.36

Isoelectric Point (pI)

48.59

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Epimerase	PF01370	29 - 279	3.8e-73	NAD dependent epimerase/dehydratase family
GDP_Man_Dehyd	PF16363	30 - 346	2.1e-139	GDP-mannose 4,6 dehydratase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0013261)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G51160 AT5G66280
fragaria_vesca	FvH4_1g12010
malus_domestica	MD02G1134100.v1.1 MD15G1247100.v1.1
prunus_persica	Prupe.7G166700_v2.0.a1
pyrus_communis	pycom02g10570
rosa_chinensis	RchiOBHm_Chr2g0099631
rosa_laevigata	RLG00000016899
rosa_multiflora	Rmu_sc0010438.1_g000002 Rmu_sc0028266.1_g000001
rosa_roxburghii	Rroxscaffold_2G00142890
rosa_rugosa	Rorug02G0081700
rosa_samantha	Rh2AG131200 Rh2BG134400 Rh2CG135400 Rh2DG135800
rosa_wichuraiana	Rw2G010140

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	844
AatII	GACGTC	2 cut(s)	159, 390
AbsI	CCTCGAGG	1 cut(s)	416
Acc36I	ACCTGC	1 cut(s)	942
Acc65I	GGTACC	1 cut(s)	930
AccB1I	GGYRCC	2 cut(s)	401, 930
AccBSI	CCGCTC	1 cut(s)	429
AccI	GTMKAC	1 cut(s)	324
AccII	CGCG	4 cut(s)	569, 597, 617, 652
AccIII	TCCGGA	1 cut(s)	29
AclWI	GGATC	7 cut(s)	21, 27, 40, 163, 361, 537, 710
AcoI	YGGCCR	3 cut(s)	106, 448, 938
AcsI	RAATTY	2 cut(s)	131, 664
AcvI	CACGTG	1 cut(s)	913
AcyI	GRCGYC	5 cut(s)	156, 387, 402, 527, 749
AdeI	CACNNNGTG	2 cut(s)	856, 916
AfaI	GTAC	5 cut(s)	467, 581, 887, 932, 1094
AfiI	CCNNNNNNNGG	6 cut(s)	319, 418, 656, 694, 699, 1010
AgsI	TTSAA	4 cut(s)	190, 637, 898, 1055
AjiI	CACGTC	1 cut(s)	349
AjnI	CCWGG	2 cut(s)	108, 867
AluBI	AGCT	3 cut(s)	253, 727, 1024
AluI	AGCT	3 cut(s)	253, 727, 1024
Alw21I	GWGCWC	1 cut(s)	75
Alw26I	GTCTC	2 cut(s)	361, 900
AlwI	GGATC	7 cut(s)	21, 27, 40, 163, 361, 537, 710
AlwNI	CAGNNNCTG	1 cut(s)	1024
Ama87I	CYCGRG	2 cut(s)	416, 687
Aor13HI	TCCGGA	1 cut(s)	29
AoxI	GGCC	7 cut(s)	106, 163, 240, 448, 498, 690, 938
ApeKI	GCWGC	3 cut(s)	802, 805, 1021
ApoI	RAATTY	2 cut(s)	131, 664
ArsI	GACNNNNNNTTYG	2 cut(s)	749, 781
Asp718I	GGTACC	1 cut(s)	930
AspLEI	GCGC	4 cut(s)	201, 404, 569, 574
AspS9I	GGNCC	4 cut(s)	177, 241, 498, 690
AsuC2I	CCSGG	4 cut(s)	478, 676, 688, 689
AsuHPI	GGTGA	7 cut(s)	85, 94, 118, 262, 676, 928, 1039
AsuII	TTCGAA	1 cut(s)	560
AvaI	CYCGRG	2 cut(s)	416, 687
AvaII	GGWCC	1 cut(s)	177
BamHI	GGATCC	1 cut(s)	32
BanI	GGYRCC	2 cut(s)	401, 930
BarI	GAAGNNNNNNTAC	2 cut(s)	242, 274
BauI	CACGAG	1 cut(s)	641
BbrPI	CACGTG	1 cut(s)	913
BbsI	GAAGAC	1 cut(s)	1053
Bbv12I	GWGCWC	1 cut(s)	75
BbvI	GCAGC	3 cut(s)	789, 817, 1033
BccI	CCATC	1 cut(s)	1030
BceAI	ACGGC	7 cut(s)	64, 130, 178, 338, 514, 677, 925
BcgI	CGANNNNNNTGC	4 cut(s)	374, 408, 970, 1004
BciT130I	CCWGG	2 cut(s)	110, 869
BcnI	CCSGG	4 cut(s)	478, 676, 688, 689
BcoDI	GTCTC	2 cut(s)	361, 900
BfmI	CTRYAG	2 cut(s)	743, 803
BfoI	RGCGCY	1 cut(s)	405
BfuAI	ACCTGC	1 cut(s)	942
BglI	GCCNNNNNGGC	2 cut(s)	114, 239
BlpI	GCTNAGC	1 cut(s)	1104
BmcAI	AGTACT	1 cut(s)	467
Bme1390I	CCNGG	6 cut(s)	110, 478, 676, 688, 689, 869
Bme18I	GGWCC	1 cut(s)	177
BmeT110I	CYCGRG	2 cut(s)	416, 687
BmgBI	CACGTC	1 cut(s)	349
BmgT120I	GGNCC	4 cut(s)	177, 241, 498, 690
BmiI	GGNNCC	6 cut(s)	34, 52, 118, 403, 499, 932
BmrFI	CCNGG	6 cut(s)	110, 478, 676, 688, 689, 869
BmrI	ACTGGG	1 cut(s)	769
BmsI	GCATC	7 cut(s)	14, 108, 210, 789, 958, 1075, 1090
BmuI	ACTGGG	1 cut(s)	769
BpiI	GAAGAC	1 cut(s)	1053
BpmI	CTGGAG	2 cut(s)	890, 922
Bpu1102I	GCTNAGC	1 cut(s)	1104
Bpu14I	TTCGAA	1 cut(s)	560
BpuMI	CCSGG	4 cut(s)	478, 676, 688, 689
BsaAI	YACGTR	4 cut(s)	781, 829, 889, 913
BsaBI	GATNNNNATC	1 cut(s)	31
BsaHI	GRCGYC	5 cut(s)	156, 387, 402, 527, 749
BsaI	GGTCTC	1 cut(s)	900
BsaJI	CCNNGG	4 cut(s)	160, 650, 687, 693
BsaWI	WCCGGW	1 cut(s)	29
BsaXI	ACNNNNNCTCC	8 cut(s)	266, 296, 493, 523, 776, 806, 863, 893
Bsc4I	CCNNNNNNNGG	6 cut(s)	319, 418, 656, 694, 699, 1010
Bse118I	RCCGGY	5 cut(s)	95, 104, 398, 446, 770
Bse1I	ACTGG	2 cut(s)	764, 905
Bse8I	GATNNNNATC	1 cut(s)	31
BseAI	TCCGGA	1 cut(s)	29
BseBI	CCWGG	2 cut(s)	110, 869
BseDI	CCNNGG	4 cut(s)	160, 650, 687, 693
BseGI	GGATG	5 cut(s)	5, 801, 973, 1090, 1105
BseJI	GATNNNNATC	1 cut(s)	31
BseLI	CCNNNNNNNGG	6 cut(s)	319, 418, 656, 694, 699, 1010
BseMII	CTCAG	2 cut(s)	527, 1118
BseNI	ACTGG	2 cut(s)	764, 905
BseRI	GAGGAG	7 cut(s)	128, 268, 271, 404, 501, 857, 875
BseX3I	CGGCCG	2 cut(s)	448, 938
BseXI	GCAGC	3 cut(s)	789, 817, 1033
BseYI	CCCAGC	3 cut(s)	195, 991, 1088
Bsh1236I	CGCG	4 cut(s)	569, 597, 617, 652
Bsh1285I	CGRYCG	2 cut(s)	451, 941
BshFI	GGCC	7 cut(s)	108, 165, 242, 450, 500, 692, 940
BshNI	GGYRCC	2 cut(s)	401, 930
BsiEI	CGRYCG	2 cut(s)	451, 941
BsiHKAI	GWGCWC	1 cut(s)	75
BsiHKCI	CYCGRG	2 cut(s)	416, 687
BslFI	GGGAC	1 cut(s)	770
BslI	CCNNNNNNNGG	6 cut(s)	319, 418, 656, 694, 699, 1010
BsmAI	GTCTC	2 cut(s)	361, 900
BsmBI	CGTCTC	1 cut(s)	361
BsmFI	GGGAC	1 cut(s)	770
BsnI	GGCC	7 cut(s)	108, 165, 242, 450, 500, 692, 940
Bso31I	GGTCTC	1 cut(s)	900
BsoBI	CYCGRG	2 cut(s)	416, 687
Bsp119I	TTCGAA	1 cut(s)	560
Bsp1286I	GDGCHC	1 cut(s)	75
Bsp13I	TCCGGA	1 cut(s)	29
Bsp143I	GATC	8 cut(s)	26, 32, 168, 366, 542, 681, 702, 918
Bsp1720I	GCTNAGC	1 cut(s)	1104
BspANI	GGCC	7 cut(s)	108, 165, 242, 450, 500, 692, 940
BspCNI	CTCAG	2 cut(s)	526, 1117
BspEI	TCCGGA	1 cut(s)	29
BspFNI	CGCG	4 cut(s)	569, 597, 617, 652
BspLI	GGNNCC	6 cut(s)	34, 52, 118, 403, 499, 932
BspMAI	CTGCAG	2 cut(s)	747, 807
BspMI	ACCTGC	1 cut(s)	942
BspPI	GGATC	7 cut(s)	21, 27, 40, 163, 361, 537, 710
BspT104I	TTCGAA	1 cut(s)	560
BspT107I	GGYRCC	2 cut(s)	401, 930
BspTNI	GGTCTC	1 cut(s)	900
BsrBI	CCGCTC	1 cut(s)	429
BsrFI	RCCGGY	5 cut(s)	95, 104, 398, 446, 770
BsrI	ACTGG	2 cut(s)	764, 905
BssAI	RCCGGY	5 cut(s)	95, 104, 398, 446, 770
BssECI	CCNNGG	4 cut(s)	160, 650, 687, 693
BssMI	GATC	8 cut(s)	26, 32, 168, 366, 542, 681, 702, 918
BssNI	GRCGYC	5 cut(s)	156, 387, 402, 527, 749
BssSI	CACGAG	1 cut(s)	641
Bst2BI	CACGAG	1 cut(s)	641
Bst2UI	CCWGG	2 cut(s)	110, 869
Bst4CI	ACNGT	3 cut(s)	177, 586, 856
BstACI	GRCGYC	5 cut(s)	156, 387, 402, 527, 749
BstBAI	YACGTR	4 cut(s)	781, 829, 889, 913
BstBI	TTCGAA	1 cut(s)	560
BstC8I	GCNNGC	7 cut(s)	244, 296, 619, 725, 747, 772, 973
BstDEI	CTNAG	3 cut(s)	513, 1062, 1104
BstDSI	CCRYGG	3 cut(s)	160, 650, 693
BstENI	CCTNNNNNAGG	1 cut(s)	416
BstF5I	GGATG	5 cut(s)	5, 801, 973, 1090, 1105
BstFNI	CGCG	4 cut(s)	569, 597, 617, 652
BstH2I	RGCGCY	1 cut(s)	405
BstHHI	GCGC	4 cut(s)	201, 404, 569, 574
BstKTI	GATC	8 cut(s)	29, 35, 171, 369, 545, 684, 705, 921
BstMAI	GTCTC	2 cut(s)	361, 900
BstMBI	GATC	8 cut(s)	26, 32, 168, 366, 542, 681, 702, 918
BstMCI	CGRYCG	2 cut(s)	451, 941
BstMWI	GCNNNNNNNGC	8 cut(s)	105, 114, 239, 401, 408, 724, 814, 977
BstNI	CCWGG	2 cut(s)	110, 869
BstSCI	CCNGG	6 cut(s)	108, 476, 674, 686, 687, 867
BstSFI	CTRYAG	2 cut(s)	743, 803
BstUI	CGCG	4 cut(s)	569, 597, 617, 652
BstV1I	GCAGC	3 cut(s)	789, 817, 1033
BstV2I	GAAGAC	1 cut(s)	1053
BstX2I	RGATCY	3 cut(s)	26, 32, 366
BstYI	RGATCY	3 cut(s)	26, 32, 366
BstZI	CGGCCG	2 cut(s)	448, 938
BsuRI	GGCC	7 cut(s)	108, 165, 242, 450, 500, 692, 940
BtgI	CCRYGG	3 cut(s)	160, 650, 693
BtgZI	GCGATG	2 cut(s)	421, 803
BtrI	CACGTC	1 cut(s)	349
BtsCI	GGATG	5 cut(s)	5, 801, 973, 1090, 1105
BveI	ACCTGC	1 cut(s)	942
Cac8I	GCNNGC	7 cut(s)	244, 296, 619, 725, 747, 772, 973
CaiI	CAGNNNCTG	1 cut(s)	1024
CfoI	GCGC	4 cut(s)	201, 404, 569, 574
Cfr10I	RCCGGY	5 cut(s)	95, 104, 398, 446, 770
Cfr13I	GGNCC	4 cut(s)	177, 241, 498, 690
Cfr42I	CCGCGG	1 cut(s)	653
Cfr9I	CCCGGG	1 cut(s)	687
CseI	GACGC	2 cut(s)	535, 738
Csp6I	GTAC	5 cut(s)	466, 580, 886, 931, 1093
CviAII	CATG	2 cut(s)	247, 1096
CviQI	GTAC	5 cut(s)	466, 580, 886, 931, 1093
DdeI	CTNAG	3 cut(s)	513, 1062, 1104
DinI	GGCGCC	1 cut(s)	403
DpnI	GATC	8 cut(s)	28, 34, 170, 368, 544, 683, 704, 920
DpnII	GATC	8 cut(s)	26, 32, 168, 366, 542, 681, 702, 918
DraIII	CACNNNGTG	2 cut(s)	856, 916
DrdI	GACNNNNNNGTC	1 cut(s)	844
DseDI	GACNNNNNNGTC	1 cut(s)	844
EaeI	YGGCCR	3 cut(s)	106, 448, 938
EagI	CGGCCG	2 cut(s)	448, 938
EciI	GGCGGA	3 cut(s)	43, 278, 398
EclXI	CGGCCG	2 cut(s)	448, 938
Eco31I	GGTCTC	1 cut(s)	900
Eco47I	GGWCC	1 cut(s)	177
Eco52I	CGGCCG	2 cut(s)	448, 938
Eco72I	CACGTG	1 cut(s)	913
Eco88I	CYCGRG	2 cut(s)	416, 687
EcoNI	CCTNNNNNAGG	1 cut(s)	416
EcoRI	GAATTC	1 cut(s)	131
EcoRII	CCWGG	2 cut(s)	108, 867
EgeI	GGCGCC	1 cut(s)	403
EheI	GGCGCC	1 cut(s)	403
Esp3I	CGTCTC	1 cut(s)	361
FaeI	CATG	2 cut(s)	250, 1099
FaiI	YATR	4 cut(s)	248, 305, 604, 1097
FaqI	GGGAC	1 cut(s)	770
FatI	CATG	2 cut(s)	246, 1095
FauI	CCCGC	3 cut(s)	251, 513, 648
FblI	GTMKAC	1 cut(s)	324
FokI	GGATG	4 cut(s)	808, 980, 1097, 1112
GlaI	GCGC	4 cut(s)	200, 403, 568, 573
GsaI	CCCAGC	3 cut(s)	199, 995, 1092
GsuI	CTGGAG	2 cut(s)	890, 922
HaeII	RGCGCY	1 cut(s)	405
HaeIII	GGCC	7 cut(s)	108, 165, 242, 450, 500, 692, 940
HgaI	GACGC	2 cut(s)	535, 738
HhaI	GCGC	4 cut(s)	201, 404, 569, 574
Hin1I	GRCGYC	5 cut(s)	156, 387, 402, 527, 749
Hin1II	CATG	2 cut(s)	250, 1099
Hin6I	GCGC	4 cut(s)	199, 402, 567, 572
HinP1I	GCGC	4 cut(s)	199, 402, 567, 572
HinfI	GANTC	6 cut(s)	62, 275, 628, 644, 739, 845
HphI	GGTGA	7 cut(s)	85, 94, 118, 262, 676, 928, 1039
Hpy166II	GTNNAC	5 cut(s)	160, 325, 582, 589, 1042
Hpy188I	TCNGA	7 cut(s)	10, 173, 487, 520, 702, 946, 960
Hpy188III	TCNNGA	2 cut(s)	30, 670
Hpy8I	GTNNAC	5 cut(s)	160, 325, 582, 589, 1042
Hpy99I	CGWCG	9 cut(s)	158, 177, 353, 389, 392, 529, 754, 841, 946
HpyAV	CCTTC	2 cut(s)	979, 1066
HpyCH4III	ACNGT	3 cut(s)	177, 586, 856
HpyCH4IV	ACGT	8 cut(s)	156, 348, 387, 780, 828, 888, 912, 1050
HpyCH4V	TGCA	4 cut(s)	621, 718, 745, 805
HpyF10VI	GCNNNNNNNGC	8 cut(s)	105, 114, 239, 401, 408, 724, 814, 977
HpyF3I	CTNAG	3 cut(s)	513, 1062, 1104
HpySE526I	ACGT	8 cut(s)	156, 348, 387, 780, 828, 888, 912, 1050
Hsp92I	GRCGYC	5 cut(s)	156, 387, 402, 527, 749
Hsp92II	CATG	2 cut(s)	250, 1099
HspAI	GCGC	4 cut(s)	199, 402, 567, 572
KasI	GGCGCC	1 cut(s)	401
Kpn2I	TCCGGA	1 cut(s)	29
KpnI	GGTACC	1 cut(s)	934
KroI	GCCGGC	1 cut(s)	770
KroNI	GCCGGC	1 cut(s)	772
KspI	CCGCGG	1 cut(s)	653
Kzo9I	GATC	8 cut(s)	26, 32, 168, 366, 542, 681, 702, 918
LmnI	GCTCC	5 cut(s)	56, 70, 122, 258, 434
Lsp1109I	GCAGC	3 cut(s)	789, 817, 1033
LweI	GCATC	7 cut(s)	14, 108, 210, 789, 958, 1075, 1090
MaeII	ACGT	8 cut(s)	156, 348, 387, 780, 828, 888, 912, 1050
MaeIII	GTNAC	1 cut(s)	670
MalI	GATC	8 cut(s)	28, 34, 170, 368, 544, 683, 704, 920
MbiI	CCGCTC	1 cut(s)	429
MboI	GATC	8 cut(s)	26, 32, 168, 366, 542, 681, 702, 918
MboII	GAAGA	4 cut(s)	691, 994, 1042, 1058
MflI	RGATCY	3 cut(s)	26, 32, 366
MhlI	GDGCHC	1 cut(s)	75
MluCI	AATT	3 cut(s)	131, 664, 1055
Mly113I	GGCGCC	1 cut(s)	402
MlyI	GAGTC	3 cut(s)	269, 653, 854
MmeI	TCCRAC	5 cut(s)	196, 207, 680, 924, 977
MroI	TCCGGA	1 cut(s)	29
MroNI	GCCGGC	1 cut(s)	770
MseI	TTAA	2 cut(s)	38, 462
MspA1I	CMGCKG	3 cut(s)	294, 652, 1024
MspR9I	CCNGG	6 cut(s)	110, 478, 676, 688, 689, 869
MteI	GCGCNGCGC	1 cut(s)	570
MvaI	CCWGG	2 cut(s)	110, 869
MvnI	CGCG	4 cut(s)	569, 597, 617, 652
MwoI	GCNNNNNNNGC	8 cut(s)	105, 114, 239, 401, 408, 724, 814, 977
NaeI	GCCGGC	1 cut(s)	772
NarI	GGCGCC	1 cut(s)	402
NciI	CCSGG	4 cut(s)	478, 676, 688, 689
NdeII	GATC	8 cut(s)	26, 32, 168, 366, 542, 681, 702, 918
NgoMIV	GCCGGC	1 cut(s)	770
NlaIII	CATG	2 cut(s)	250, 1099
NlaIV	GGNNCC	6 cut(s)	34, 52, 118, 403, 499, 932
NmuCI	GTSAC	1 cut(s)	670
NspV	TTCGAA	1 cut(s)	560
PaeR7I	CTCGAG	1 cut(s)	416
PcsI	WCGNNNNNNNCGW	2 cut(s)	315, 918
PdiI	GCCGGC	1 cut(s)	772
PfeI	GAWTC	3 cut(s)	62, 628, 739
PfoI	TCCNGGA	1 cut(s)	867
PleI	GAGTC	3 cut(s)	269, 652, 853
PluTI	GGCGCC	1 cut(s)	405
PmaCI	CACGTG	1 cut(s)	913
PmlI	CACGTG	1 cut(s)	913
PpsI	GAGTC	3 cut(s)	269, 652, 853
Ppu21I	YACGTR	4 cut(s)	781, 829, 889, 913
Psp6I	CCWGG	2 cut(s)	108, 867
PspCI	CACGTG	1 cut(s)	913
PspFI	CCCAGC	3 cut(s)	195, 991, 1088
PspGI	CCWGG	2 cut(s)	108, 867
PspN4I	GGNNCC	6 cut(s)	34, 52, 118, 403, 499, 932
PspPI	GGNCC	4 cut(s)	177, 241, 498, 690
PspXI	VCTCGAGB	1 cut(s)	416
PstI	CTGCAG	2 cut(s)	747, 807
PstNI	CAGNNNCTG	1 cut(s)	1024
PsuI	RGATCY	3 cut(s)	26, 32, 366
PvuII	CAGCTG	1 cut(s)	1024
RsaI	GTAC	5 cut(s)	467, 581, 887, 932, 1094
RsaNI	GTAC	5 cut(s)	466, 580, 886, 931, 1093
SacII	CCGCGG	1 cut(s)	653
SaqAI	TTAA	2 cut(s)	38, 462
Sau3AI	GATC	8 cut(s)	26, 32, 168, 366, 542, 681, 702, 918
Sau96I	GGNCC	4 cut(s)	177, 241, 498, 690
ScaI	AGTACT	1 cut(s)	467
SchI	GAGTC	3 cut(s)	269, 653, 854
ScrFI	CCNGG	6 cut(s)	110, 478, 676, 688, 689, 869
SduI	GDGCHC	1 cut(s)	75
SfaNI	GCATC	7 cut(s)	14, 108, 210, 789, 958, 1075, 1090
SfcI	CTRYAG	2 cut(s)	743, 803
SfoI	GGCGCC	1 cut(s)	403
Sfr274I	CTCGAG	1 cut(s)	416
Sfr303I	CCGCGG	1 cut(s)	653
SfuI	TTCGAA	1 cut(s)	560
SgrAI	CRCCGGYG	1 cut(s)	398
SgrBI	CCGCGG	1 cut(s)	653
SinI	GGWCC	1 cut(s)	177
SlaI	CTCGAG	1 cut(s)	416
SmaI	CCCGGG	1 cut(s)	689
SmlI	CTYRAG	1 cut(s)	416
SmoI	CTYRAG	1 cut(s)	416
Sse9I	AATT	3 cut(s)	131, 664, 1055
SspDI	GGCGCC	1 cut(s)	401
StyD4I	CCNGG	6 cut(s)	108, 476, 674, 686, 687, 867
TaaI	ACNGT	3 cut(s)	177, 586, 856
TaiI	ACGT	8 cut(s)	159, 351, 390, 783, 831, 891, 915, 1053
TaqI	TCGA	7 cut(s)	141, 219, 300, 417, 560, 752, 921
TasI	AATT	3 cut(s)	131, 664, 1055
TatI	WGTACW	1 cut(s)	465
TauI	GCSGC	8 cut(s)	294, 338, 443, 453, 572, 652, 655, 940
TfiI	GAWTC	3 cut(s)	62, 628, 739
Tru1I	TTAA	2 cut(s)	38, 462
Tru9I	TTAA	2 cut(s)	38, 462
TseFI	GTSAC	1 cut(s)	670
TseI	GCWGC	3 cut(s)	802, 805, 1021
Tsp45I	GTSAC	1 cut(s)	670
TspDTI	ATGAA	1 cut(s)	263
TspGWI	ACGGA	1 cut(s)	854
TspMI	CCCGGG	1 cut(s)	687
VpaK11BI	GGWCC	1 cut(s)	177
XagI	CCTNNNNNAGG	1 cut(s)	416
XapI	RAATTY	2 cut(s)	131, 664
XhoI	CTCGAG	1 cut(s)	416
XmaI	CCCGGG	1 cut(s)	687
XmiI	GTMKAC	1 cut(s)	324
ZraI	GACGTC	2 cut(s)	157, 388
ZrmI	AGTACT	1 cut(s)	467

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.