negative regulation of mRNA metabolic process
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| MBOAT | PF03062 | 277 - 499 | 5.4e-23 | MBOAT, membrane-bound O-acyltransferase family |
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 338 |
| Acc65I | GGTACC | 2 cut(s) | 743, 1378 |
| AccB1I | GGYRCC | 2 cut(s) | 743, 1378 |
| AccII | CGCG | 2 cut(s) | 50, 92 |
| AciI | CCGC | 9 cut(s) | 45, 48, 79, 140, 228, 243, 311, 522, 1361 |
| AclI | AACGTT | 1 cut(s) | 848 |
| AclWI | GGATC | 3 cut(s) | 78, 243, 1143 |
| AcoI | YGGCCR | 1 cut(s) | 60 |
| AcsI | RAATTY | 5 cut(s) | 257, 279, 409, 985, 1415 |
| AfaI | GTAC | 3 cut(s) | 745, 877, 1380 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 447, 1004 |
| AgeI | ACCGGT | 1 cut(s) | 440 |
| AgsI | TTSAA | 6 cut(s) | 358, 459, 817, 1003, 1039, 1345 |
| AhlI | ACTAGT | 1 cut(s) | 863 |
| AjnI | CCWGG | 2 cut(s) | 775, 1374 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 1127, 1159 |
| AluBI | AGCT | 6 cut(s) | 203, 318, 813, 1042, 1120, 1315 |
| AluI | AGCT | 6 cut(s) | 203, 318, 813, 1042, 1120, 1315 |
| Alw26I | GTCTC | 3 cut(s) | 140, 356, 712 |
| AlwI | GGATC | 3 cut(s) | 78, 243, 1143 |
| AoxI | GGCC | 4 cut(s) | 60, 83, 269, 476 |
| ApeKI | GCWGC | 1 cut(s) | 1120 |
| ApoI | RAATTY | 5 cut(s) | 257, 279, 409, 985, 1415 |
| AsiGI | ACCGGT | 1 cut(s) | 440 |
| Asp718I | GGTACC | 2 cut(s) | 743, 1378 |
| AspS9I | GGNCC | 1 cut(s) | 477 |
| AsuC2I | CCSGG | 1 cut(s) | 175 |
| AsuHPI | GGTGA | 6 cut(s) | 16, 28, 163, 242, 281, 803 |
| AsuII | TTCGAA | 1 cut(s) | 889 |
| BaeI | ACNNNNGTAYC | 4 cut(s) | 599, 632, 859, 892 |
| BanI | GGYRCC | 2 cut(s) | 743, 1378 |
| BauI | CACGAG | 1 cut(s) | 1310 |
| BbvI | GCAGC | 1 cut(s) | 1107 |
| BccI | CCATC | 3 cut(s) | 937, 1213, 1423 |
| BceAI | ACGGC | 3 cut(s) | 142, 891, 1259 |
| BciT130I | CCWGG | 2 cut(s) | 777, 1376 |
| BciVI | GTATCC | 1 cut(s) | 627 |
| BclI | TGATCA | 2 cut(s) | 924, 1392 |
| BcnI | CCSGG | 1 cut(s) | 175 |
| BcoDI | GTCTC | 3 cut(s) | 140, 356, 712 |
| BcuI | ACTAGT | 1 cut(s) | 863 |
| BfaI | CTAG | 3 cut(s) | 530, 864, 1292 |
| BfuAI | ACCTGC | 1 cut(s) | 338 |
| BfuI | GTATCC | 1 cut(s) | 627 |
| BisI | GCNGC | 4 cut(s) | 45, 48, 522, 1121 |
| BlpI | GCTNAGC | 2 cut(s) | 314, 1116 |
| BlsI | GCNGC | 4 cut(s) | 46, 49, 523, 1122 |
| Bme1390I | CCNGG | 3 cut(s) | 175, 777, 1376 |
| BmgT120I | GGNCC | 1 cut(s) | 477 |
| BmiI | GGNNCC | 5 cut(s) | 247, 479, 745, 1010, 1380 |
| BmrFI | CCNGG | 3 cut(s) | 175, 777, 1376 |
| BmsI | GCATC | 3 cut(s) | 313, 663, 1473 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 134, 166 |
| BpmI | CTGGAG | 1 cut(s) | 136 |
| Bpu1102I | GCTNAGC | 2 cut(s) | 314, 1116 |
| Bpu14I | TTCGAA | 1 cut(s) | 889 |
| BpuMI | CCSGG | 1 cut(s) | 175 |
| BsaI | GGTCTC | 2 cut(s) | 140, 356 |
| BsaJI | CCNNGG | 4 cut(s) | 57, 120, 174, 1468 |
| BsaWI | WCCGGW | 5 cut(s) | 248, 291, 440, 619, 935 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 1260, 1290 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 447, 1004 |
| Bse118I | RCCGGY | 2 cut(s) | 267, 440 |
| Bse1I | ACTGG | 3 cut(s) | 153, 1389, 1535 |
| Bse3DI | GCAATG | 2 cut(s) | 464, 1320 |
| BseBI | CCWGG | 2 cut(s) | 777, 1376 |
| BseDI | CCNNGG | 4 cut(s) | 57, 120, 174, 1468 |
| BseGI | GGATG | 5 cut(s) | 184, 772, 994, 1224, 1464 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 447, 1004 |
| BseMI | GCAATG | 2 cut(s) | 464, 1320 |
| BseMII | CTCAG | 2 cut(s) | 649, 1107 |
| BseNI | ACTGG | 3 cut(s) | 153, 1389, 1535 |
| BseRI | GAGGAG | 3 cut(s) | 158, 227, 1193 |
| BseXI | GCAGC | 1 cut(s) | 1107 |
| Bsh1236I | CGCG | 2 cut(s) | 50, 92 |
| Bsh1285I | CGRYCG | 1 cut(s) | 90 |
| BshFI | GGCC | 4 cut(s) | 62, 85, 271, 478 |
| BshNI | GGYRCC | 2 cut(s) | 743, 1378 |
| BshTI | ACCGGT | 1 cut(s) | 440 |
| BsiEI | CGRYCG | 1 cut(s) | 90 |
| BslFI | GGGAC | 1 cut(s) | 39 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 447, 1004 |
| BsmAI | GTCTC | 3 cut(s) | 140, 356, 712 |
| BsmBI | CGTCTC | 1 cut(s) | 712 |
| BsmFI | GGGAC | 1 cut(s) | 39 |
| BsmI | GAATGC | 1 cut(s) | 1168 |
| BsnI | GGCC | 4 cut(s) | 62, 85, 271, 478 |
| Bso31I | GGTCTC | 2 cut(s) | 140, 356 |
| Bsp119I | TTCGAA | 1 cut(s) | 889 |
| Bsp143I | GATC | 9 cut(s) | 70, 87, 168, 235, 461, 924, 1135, 1392, 1443 |
| Bsp1720I | GCTNAGC | 2 cut(s) | 314, 1116 |
| Bsp68I | TCGCGA | 1 cut(s) | 92 |
| BspACI | CCGC | 9 cut(s) | 45, 48, 79, 140, 228, 243, 311, 522, 1361 |
| BspANI | GGCC | 4 cut(s) | 62, 85, 271, 478 |
| BspCNI | CTCAG | 2 cut(s) | 648, 1108 |
| BspFNI | CGCG | 2 cut(s) | 50, 92 |
| BspHI | TCATGA | 1 cut(s) | 802 |
| BspLI | GGNNCC | 5 cut(s) | 247, 479, 745, 1010, 1380 |
| BspMI | ACCTGC | 1 cut(s) | 338 |
| BspPI | GGATC | 3 cut(s) | 78, 243, 1143 |
| BspT104I | TTCGAA | 1 cut(s) | 889 |
| BspT107I | GGYRCC | 2 cut(s) | 743, 1378 |
| BspTNI | GGTCTC | 2 cut(s) | 140, 356 |
| BsrDI | GCAATG | 2 cut(s) | 464, 1320 |
| BsrFI | RCCGGY | 2 cut(s) | 267, 440 |
| BsrI | ACTGG | 3 cut(s) | 153, 1389, 1535 |
| BssAI | RCCGGY | 2 cut(s) | 267, 440 |
| BssECI | CCNNGG | 4 cut(s) | 57, 120, 174, 1468 |
| BssMI | GATC | 9 cut(s) | 70, 87, 168, 235, 461, 924, 1135, 1392, 1443 |
| BssSI | CACGAG | 1 cut(s) | 1310 |
| BssT1I | CCWWGG | 1 cut(s) | 120 |
| Bst2BI | CACGAG | 1 cut(s) | 1310 |
| Bst2UI | CCWGG | 2 cut(s) | 777, 1376 |
| Bst4CI | ACNGT | 5 cut(s) | 34, 40, 1174, 1194, 1486 |
| Bst6I | CTCTTC | 4 cut(s) | 359, 507, 588, 1053 |
| BstBI | TTCGAA | 1 cut(s) | 889 |
| BstC8I | GCNNGC | 3 cut(s) | 395, 685, 1247 |
| BstDEI | CTNAG | 4 cut(s) | 314, 635, 809, 1116 |
| BstDSI | CCRYGG | 1 cut(s) | 57 |
| BstF5I | GGATG | 5 cut(s) | 184, 772, 994, 1224, 1464 |
| BstFNI | CGCG | 2 cut(s) | 50, 92 |
| BstKTI | GATC | 9 cut(s) | 73, 90, 171, 238, 464, 927, 1138, 1395, 1446 |
| BstMAI | GTCTC | 3 cut(s) | 140, 356, 712 |
| BstMBI | GATC | 9 cut(s) | 70, 87, 168, 235, 461, 924, 1135, 1392, 1443 |
| BstMCI | CGRYCG | 1 cut(s) | 90 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 260, 475 |
| BstNI | CCWGG | 2 cut(s) | 777, 1376 |
| BstNSI | RCATGY | 1 cut(s) | 1078 |
| BstSCI | CCNGG | 3 cut(s) | 173, 775, 1374 |
| BstUI | CGCG | 2 cut(s) | 50, 92 |
| BstV1I | GCAGC | 1 cut(s) | 1107 |
| BstX2I | RGATCY | 1 cut(s) | 70 |
| BstYI | RGATCY | 1 cut(s) | 70 |
| BsuI | GTATCC | 1 cut(s) | 627 |
| BsuRI | GGCC | 4 cut(s) | 62, 85, 271, 478 |
| BtgI | CCRYGG | 1 cut(s) | 57 |
| BtsCI | GGATG | 5 cut(s) | 184, 772, 994, 1224, 1464 |
| BtsIMutI | CAGTG | 2 cut(s) | 160, 1382 |
| BtuMI | TCGCGA | 1 cut(s) | 92 |
| BveI | ACCTGC | 1 cut(s) | 338 |
| Cac8I | GCNNGC | 3 cut(s) | 395, 685, 1247 |
| CciI | TCATGA | 1 cut(s) | 802 |
| Cfr10I | RCCGGY | 2 cut(s) | 267, 440 |
| Cfr13I | GGNCC | 1 cut(s) | 477 |
| Csp6I | GTAC | 3 cut(s) | 744, 876, 1379 |
| CspAI | ACCGGT | 1 cut(s) | 440 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 1371, 1406 |
| CviAII | CATG | 9 cut(s) | 344, 803, 835, 882, 1053, 1075, 1253, 1480, 1502 |
| CviQI | GTAC | 3 cut(s) | 744, 876, 1379 |
| DdeI | CTNAG | 4 cut(s) | 314, 635, 809, 1116 |
| DpnI | GATC | 9 cut(s) | 72, 89, 170, 237, 463, 926, 1137, 1394, 1445 |
| DpnII | GATC | 9 cut(s) | 70, 87, 168, 235, 461, 924, 1135, 1392, 1443 |
| EaeI | YGGCCR | 1 cut(s) | 60 |
| Eam1104I | CTCTTC | 4 cut(s) | 359, 507, 588, 1053 |
| EarI | CTCTTC | 4 cut(s) | 359, 507, 588, 1053 |
| EciI | GGCGGA | 2 cut(s) | 94, 155 |
| Eco130I | CCWWGG | 1 cut(s) | 120 |
| Eco31I | GGTCTC | 2 cut(s) | 140, 356 |
| EcoRI | GAATTC | 1 cut(s) | 985 |
| EcoRII | CCWGG | 2 cut(s) | 775, 1374 |
| EcoT14I | CCWWGG | 1 cut(s) | 120 |
| EcoT22I | ATGCAT | 2 cut(s) | 1076, 1322 |
| ErhI | CCWWGG | 1 cut(s) | 120 |
| Esp3I | CGTCTC | 1 cut(s) | 712 |
| FaeI | CATG | 9 cut(s) | 347, 806, 838, 885, 1056, 1078, 1256, 1483, 1505 |
| FaqI | GGGAC | 1 cut(s) | 39 |
| FatI | CATG | 9 cut(s) | 343, 802, 834, 881, 1052, 1074, 1252, 1479, 1501 |
| FauI | CCCGC | 1 cut(s) | 1354 |
| FbaI | TGATCA | 2 cut(s) | 924, 1392 |
| Fnu4HI | GCNGC | 4 cut(s) | 45, 48, 522, 1121 |
| FokI | GGATG | 5 cut(s) | 191, 779, 981, 1231, 1451 |
| Fsp4HI | GCNGC | 4 cut(s) | 45, 48, 522, 1121 |
| FspBI | CTAG | 3 cut(s) | 530, 864, 1292 |
| GluI | GCNGC | 4 cut(s) | 45, 48, 522, 1121 |
| GsuI | CTGGAG | 1 cut(s) | 136 |
| HaeIII | GGCC | 4 cut(s) | 62, 85, 271, 478 |
| Hin1II | CATG | 9 cut(s) | 347, 806, 838, 885, 1056, 1078, 1256, 1483, 1505 |
| HincII | GTYRAC | 1 cut(s) | 1475 |
| HindII | GTYRAC | 1 cut(s) | 1475 |
| HindIII | AAGCTT | 2 cut(s) | 201, 1040 |
| HphI | GGTGA | 6 cut(s) | 16, 28, 163, 242, 281, 803 |
| Hpy166II | GTNNAC | 2 cut(s) | 388, 1475 |
| Hpy188I | TCNGA | 8 cut(s) | 13, 70, 115, 277, 322, 335, 638, 1518 |
| Hpy188III | TCNNGA | 9 cut(s) | 91, 406, 459, 803, 982, 1139, 1310, 1390, 1420 |
| Hpy8I | GTNNAC | 2 cut(s) | 388, 1475 |
| Hpy99I | CGWCG | 1 cut(s) | 44 |
| HpyAV | CCTTC | 4 cut(s) | 282, 491, 997, 1297 |
| HpyCH4III | ACNGT | 5 cut(s) | 34, 40, 1174, 1194, 1486 |
| HpyCH4IV | ACGT | 1 cut(s) | 848 |
| HpyCH4V | TGCA | 9 cut(s) | 347, 687, 718, 1022, 1074, 1166, 1210, 1320, 1464 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 260, 475 |
| HpyF3I | CTNAG | 4 cut(s) | 314, 635, 809, 1116 |
| HpySE526I | ACGT | 1 cut(s) | 848 |
| Hsp92II | CATG | 9 cut(s) | 347, 806, 838, 885, 1056, 1078, 1256, 1483, 1505 |
| KpnI | GGTACC | 2 cut(s) | 747, 1382 |
| Ksp22I | TGATCA | 2 cut(s) | 924, 1392 |
| Kzo9I | GATC | 9 cut(s) | 70, 87, 168, 235, 461, 924, 1135, 1392, 1443 |
| LmnI | GCTCC | 2 cut(s) | 323, 847 |
| Lsp1109I | GCAGC | 1 cut(s) | 1107 |
| LweI | GCATC | 3 cut(s) | 313, 663, 1473 |
| MaeI | CTAG | 3 cut(s) | 530, 864, 1292 |
| MaeII | ACGT | 1 cut(s) | 848 |
| MaeIII | GTNAC | 6 cut(s) | 34, 641, 664, 854, 866, 1334 |
| MalI | GATC | 9 cut(s) | 72, 89, 170, 237, 463, 926, 1137, 1394, 1445 |
| MboI | GATC | 9 cut(s) | 70, 87, 168, 235, 461, 924, 1135, 1392, 1443 |
| MboII | GAAGA | 7 cut(s) | 178, 229, 346, 494, 575, 1040, 1438 |
| MflI | RGATCY | 1 cut(s) | 70 |
| MlyI | GAGTC | 5 cut(s) | 61, 74, 155, 316, 638 |
| MmeI | TCCRAC | 3 cut(s) | 48, 869, 1414 |
| Mph1103I | ATGCAT | 2 cut(s) | 1076, 1322 |
| MseI | TTAA | 5 cut(s) | 300, 413, 435, 698, 1103 |
| MslI | CAYNNNNRTG | 1 cut(s) | 1484 |
| MspR9I | CCNGG | 3 cut(s) | 175, 777, 1376 |
| Mva1269I | GAATGC | 1 cut(s) | 1168 |
| MvaI | CCWGG | 2 cut(s) | 777, 1376 |
| MvnI | CGCG | 2 cut(s) | 50, 92 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 260, 475 |
| NciI | CCSGG | 1 cut(s) | 175 |
| NdeII | GATC | 9 cut(s) | 70, 87, 168, 235, 461, 924, 1135, 1392, 1443 |
| NlaIII | CATG | 9 cut(s) | 347, 806, 838, 885, 1056, 1078, 1256, 1483, 1505 |
| NlaIV | GGNNCC | 5 cut(s) | 247, 479, 745, 1010, 1380 |
| NmeAIII | GCCGAG | 1 cut(s) | 88 |
| NmuCI | GTSAC | 3 cut(s) | 34, 641, 1334 |
| NruI | TCGCGA | 1 cut(s) | 92 |
| NsiI | ATGCAT | 2 cut(s) | 1076, 1322 |
| NspI | RCATGY | 1 cut(s) | 1078 |
| NspV | TTCGAA | 1 cut(s) | 889 |
| PagI | TCATGA | 1 cut(s) | 802 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 96 |
| PctI | GAATGC | 1 cut(s) | 1168 |
| PfeI | GAWTC | 5 cut(s) | 14, 110, 116, 566, 1513 |
| PinAI | ACCGGT | 1 cut(s) | 440 |
| PkrI | GCNGC | 4 cut(s) | 46, 49, 523, 1122 |
| Ple19I | CGATCG | 1 cut(s) | 90 |
| PleI | GAGTC | 5 cut(s) | 60, 73, 155, 315, 638 |
| PpsI | GAGTC | 5 cut(s) | 60, 73, 155, 315, 638 |
| Psp1406I | AACGTT | 1 cut(s) | 848 |
| Psp6I | CCWGG | 2 cut(s) | 775, 1374 |
| PspGI | CCWGG | 2 cut(s) | 775, 1374 |
| PspN4I | GGNNCC | 5 cut(s) | 247, 479, 745, 1010, 1380 |
| PspPI | GGNCC | 1 cut(s) | 477 |
| PsuI | RGATCY | 1 cut(s) | 70 |
| PvuI | CGATCG | 1 cut(s) | 90 |
| RruI | TCGCGA | 1 cut(s) | 92 |
| RsaI | GTAC | 3 cut(s) | 745, 877, 1380 |
| RsaNI | GTAC | 3 cut(s) | 744, 876, 1379 |
| RseI | CAYNNNNRTG | 1 cut(s) | 1484 |
| SaqAI | TTAA | 5 cut(s) | 300, 413, 435, 698, 1103 |
| SatI | GCNGC | 4 cut(s) | 45, 48, 522, 1121 |
| Sau3AI | GATC | 9 cut(s) | 70, 87, 168, 235, 461, 924, 1135, 1392, 1443 |
| Sau96I | GGNCC | 1 cut(s) | 477 |
| SchI | GAGTC | 5 cut(s) | 61, 74, 155, 316, 638 |
| ScrFI | CCNGG | 3 cut(s) | 175, 777, 1376 |
| SfaNI | GCATC | 3 cut(s) | 313, 663, 1473 |
| SfuI | TTCGAA | 1 cut(s) | 889 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 1484 |
| SpeI | ACTAGT | 1 cut(s) | 863 |
| SsiI | CCGC | 9 cut(s) | 45, 48, 79, 140, 228, 243, 311, 522, 1361 |
| SspI | AATATT | 1 cut(s) | 1108 |
| SspMI | CTAG | 3 cut(s) | 530, 864, 1292 |
| StyD4I | CCNGG | 3 cut(s) | 173, 775, 1374 |
| StyI | CCWWGG | 1 cut(s) | 120 |
| TaaI | ACNGT | 5 cut(s) | 34, 40, 1174, 1194, 1486 |
| TaiI | ACGT | 1 cut(s) | 851 |
| TaqI | TCGA | 6 cut(s) | 164, 238, 405, 889, 1138, 1427 |
| TaqII | GACCGA | 1 cut(s) | 1460 |
| TauI | GCSGC | 3 cut(s) | 47, 50, 524 |
| TfiI | GAWTC | 5 cut(s) | 14, 110, 116, 566, 1513 |
| Tru1I | TTAA | 5 cut(s) | 300, 413, 435, 698, 1103 |
| Tru9I | TTAA | 5 cut(s) | 300, 413, 435, 698, 1103 |
| TscAI | CASTG | 2 cut(s) | 160, 1389 |
| TseFI | GTSAC | 3 cut(s) | 34, 641, 1334 |
| TseI | GCWGC | 1 cut(s) | 1120 |
| Tsp45I | GTSAC | 3 cut(s) | 34, 641, 1334 |
| TspDTI | ATGAA | 6 cut(s) | 213, 431, 575, 819, 823, 1526 |
| TspRI | CASTG | 2 cut(s) | 160, 1389 |
| XapI | RAATTY | 5 cut(s) | 257, 279, 409, 985, 1415 |
| XceI | RCATGY | 1 cut(s) | 1078 |
| XspI | CTAG | 3 cut(s) | 530, 864, 1292 |
| Zsp2I | ATGCAT | 2 cut(s) | 1076, 1322 |