pycom02g10580

No description available

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr2
Physical Location & Seq
Reverse (-)
7332811 .. 7333158
348 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom02g10580.1

Sequence Viewer

Length: 348 bp
ATGGTGAAATTGGTGGTATCTGTTGCACGTTGTCATGACTTTCGGAGTTTGCCTATAGTTCATCATGATCTATTTTTACTTGTTCTAACTTCGTATTGGAAGACCCATGCAGTCCATTCGTTGCAGGTGGAGATTGGGGAGCTTAAAGGAAGGTTAACAGAGGTCATTAGTAACTGCGATGCACTGTGCCGGAGAATATCTGTTGAAGGACCAGAATCCCTCCGGTCATCCATCAAGCCGTTTTCTATCTGCACCACCGGCCAAGAAATCCGATCTAGCCCAAGCTCATCCGATCTTCAAAGAGATCCAGACCGAAGCCTACCCTCTGCCGAAGCCAAGTTAGACTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

116

Amino Acids

12.81

Weight (kDa)

6.95

Isoelectric Point (pI)

63.14

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 115
Acc36I ACCTGC 1 cut(s) 115
AclWI GGATC 1 cut(s) 299
AcoI YGGCCR 1 cut(s) 259
AgsI TTSAA 2 cut(s) 206, 299
AluBI AGCT 2 cut(s) 142, 285
AluI AGCT 2 cut(s) 142, 285
AlwI GGATC 1 cut(s) 299
AoxI GGCC 1 cut(s) 259
AspS9I GGNCC 1 cut(s) 209
AsuHPI GGTGA 1 cut(s) 16
AvaII GGWCC 1 cut(s) 209
BbsI GAAGAC 1 cut(s) 107
BccI CCATC 1 cut(s) 239
BceAI ACGGC 1 cut(s) 223
BcgI CGANNNNNNTGC 2 cut(s) 99, 133
BfaI CTAG 1 cut(s) 276
BfmI CTRYAG 1 cut(s) 54
BfuAI ACCTGC 1 cut(s) 115
Bme18I GGWCC 1 cut(s) 209
BmgT120I GGNCC 1 cut(s) 209
BmsI GCATC 1 cut(s) 169
BpiI GAAGAC 1 cut(s) 107
BsaWI WCCGGW 1 cut(s) 222
Bse118I RCCGGY 1 cut(s) 257
BseGI GGATG 2 cut(s) 227, 287
BsgI GTGCAG 1 cut(s) 235
BshFI GGCC 1 cut(s) 261
BsiSI CCGG 3 cut(s) 190, 223, 258
BsnI GGCC 1 cut(s) 261
Bsp143I GATC 4 cut(s) 67, 272, 292, 304
BspANI GGCC 1 cut(s) 261
BspHI TCATGA 2 cut(s) 34, 64
BspMI ACCTGC 1 cut(s) 115
BspPI GGATC 1 cut(s) 299
BsrFI RCCGGY 1 cut(s) 257
BssAI RCCGGY 1 cut(s) 257
BssMI GATC 4 cut(s) 67, 272, 292, 304
Bst4CI ACNGT 1 cut(s) 186
BstF5I GGATG 2 cut(s) 227, 287
BstKTI GATC 4 cut(s) 70, 275, 295, 307
BstMBI GATC 4 cut(s) 67, 272, 292, 304
BstMWI GCNNNNNNNGC 1 cut(s) 258
BstSFI CTRYAG 1 cut(s) 54
BstV2I GAAGAC 1 cut(s) 107
BstX2I RGATCY 1 cut(s) 304
BstYI RGATCY 1 cut(s) 304
BsuRI GGCC 1 cut(s) 261
BtgZI GCGATG 1 cut(s) 192
BtsCI GGATG 2 cut(s) 227, 287
BtsIMutI CAGTG 1 cut(s) 182
BveI ACCTGC 1 cut(s) 115
CciI TCATGA 2 cut(s) 34, 64
Cfr10I RCCGGY 1 cut(s) 257
Cfr13I GGNCC 1 cut(s) 209
CviAII CATG 3 cut(s) 35, 65, 107
CviJI RGCY 7 cut(s) 142, 238, 261, 279, 285, 318, 335
CviKI_1 RGCY 7 cut(s) 142, 238, 261, 279, 285, 318, 335
DpnI GATC 4 cut(s) 69, 274, 294, 306
DpnII GATC 4 cut(s) 67, 272, 292, 304
EaeI YGGCCR 1 cut(s) 259
Eco47I GGWCC 1 cut(s) 209
FaeI CATG 3 cut(s) 38, 68, 110
FaiI YATR 4 cut(s) 36, 56, 66, 108
FatI CATG 3 cut(s) 34, 64, 106
FokI GGATG 2 cut(s) 214, 274
FspBI CTAG 1 cut(s) 276
HaeIII GGCC 1 cut(s) 261
HapII CCGG 3 cut(s) 190, 223, 258
Hin1II CATG 3 cut(s) 38, 68, 110
HincII GTYRAC 1 cut(s) 156
HindII GTYRAC 1 cut(s) 156
HinfI GANTC 1 cut(s) 215
HpaI GTTAAC 1 cut(s) 156
HpaII CCGG 3 cut(s) 190, 223, 258
HphI GGTGA 1 cut(s) 16
Hpy166II GTNNAC 1 cut(s) 156
Hpy188I TCNGA 3 cut(s) 45, 272, 292
Hpy188III TCNNGA 3 cut(s) 35, 65, 308
Hpy8I GTNNAC 1 cut(s) 156
HpyAV CCTTC 2 cut(s) 144, 200
HpyCH4III ACNGT 1 cut(s) 186
HpyCH4IV ACGT 1 cut(s) 28
HpyCH4V TGCA 5 cut(s) 26, 110, 124, 182, 252
HpyF10VI GCNNNNNNNGC 1 cut(s) 258
HpySE526I ACGT 1 cut(s) 28
Hsp92II CATG 3 cut(s) 38, 68, 110
KspAI GTTAAC 1 cut(s) 156
Kzo9I GATC 4 cut(s) 67, 272, 292, 304
LmnI GCTCC 1 cut(s) 139
LpnPI CCDG 6 cut(s) 110, 203, 225, 236, 271, 321
LweI GCATC 1 cut(s) 169
MaeI CTAG 1 cut(s) 276
MaeII ACGT 1 cut(s) 28
MaeIII GTNAC 1 cut(s) 170
MalI GATC 4 cut(s) 69, 274, 294, 306
MboI GATC 4 cut(s) 67, 272, 292, 304
MboII GAAGA 2 cut(s) 112, 287
MflI RGATCY 1 cut(s) 304
MluCI AATT 1 cut(s) 8
MnlI CCTC 3 cut(s) 154, 230, 334
MseI TTAA 2 cut(s) 144, 155
MspI CCGG 3 cut(s) 190, 223, 258
MwoI GCNNNNNNNGC 1 cut(s) 258
NdeII GATC 4 cut(s) 67, 272, 292, 304
NlaIII CATG 3 cut(s) 38, 68, 110
PagI TCATGA 2 cut(s) 34, 64
PaqCI CACCTGC 1 cut(s) 115
PfeI GAWTC 1 cut(s) 215
PspPI GGNCC 1 cut(s) 209
PsuI RGATCY 1 cut(s) 304
SaqAI TTAA 2 cut(s) 144, 155
Sau3AI GATC 4 cut(s) 67, 272, 292, 304
Sau96I GGNCC 1 cut(s) 209
SetI ASST 6 cut(s) 31, 129, 144, 155, 165, 287
SfaNI GCATC 1 cut(s) 169
SfcI CTRYAG 1 cut(s) 54
SinI GGWCC 1 cut(s) 209
Sse9I AATT 1 cut(s) 8
SspMI CTAG 1 cut(s) 276
TaaI ACNGT 1 cut(s) 186
TaiI ACGT 1 cut(s) 31
TaqII GACCGA 1 cut(s) 327
TasI AATT 1 cut(s) 8
TfiI GAWTC 1 cut(s) 215
Tru1I TTAA 2 cut(s) 144, 155
Tru9I TTAA 2 cut(s) 144, 155
TscAI CASTG 1 cut(s) 189
TspDTI ATGAA 1 cut(s) 50
TspRI CASTG 1 cut(s) 189
VpaK11BI GGWCC 1 cut(s) 209
XspI CTAG 1 cut(s) 276
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.