Malate dehydrogenase
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G22780 |
| fragaria_vesca | FvH4_1g18690 FvH4_1g18690 FvH4_1g18690 |
| malus_domestica | MD02G1194500.v1.1 MD15G1304800.v1.1 |
| prunus_persica | Prupe.6G212400_v2.0.a1 Prupe.6G212400_v2.0.a1 |
| pyrus_communis | pycom02g15840 pycom15g26720 |
| rosa_chinensis | RchiOBHm_Chr2g0109561 |
| rosa_laevigata | RLG00000017745 |
| rosa_multiflora | Rmu_sc0000332.1_g000042 |
| rosa_roxburghii | Rroxscaffold_2G00134150 |
| rosa_rugosa | Rorug02G0160600 |
| rosa_samantha | Rh2BG223200 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AatII | GACGTC | 1 cut(s) | 246 |
| Acc65I | GGTACC | 2 cut(s) | 134, 548 |
| AccB1I | GGYRCC | 3 cut(s) | 134, 293, 548 |
| AccII | CGCG | 3 cut(s) | 32, 123, 306 |
| AciI | CCGC | 6 cut(s) | 57, 109, 121, 138, 174, 306 |
| AclWI | GGATC | 1 cut(s) | 629 |
| AcoI | YGGCCR | 2 cut(s) | 369, 955 |
| AcsI | RAATTY | 1 cut(s) | 842 |
| AcuI | CTGAAG | 1 cut(s) | 549 |
| AcyI | GRCGYC | 2 cut(s) | 243, 294 |
| AfaI | GTAC | 5 cut(s) | 136, 473, 550, 948, 961 |
| AfeI | AGCGCT | 1 cut(s) | 339 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 662, 663, 948 |
| AgsI | TTSAA | 1 cut(s) | 115 |
| AjnI | CCWGG | 1 cut(s) | 458 |
| AluBI | AGCT | 5 cut(s) | 18, 328, 797, 803, 968 |
| AluI | AGCT | 5 cut(s) | 18, 328, 797, 803, 968 |
| Alw26I | GTCTC | 2 cut(s) | 226, 705 |
| AlwI | GGATC | 1 cut(s) | 629 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 328, 465 |
| Aor51HI | AGCGCT | 1 cut(s) | 339 |
| AoxI | GGCC | 4 cut(s) | 181, 369, 955, 1011 |
| ApeKI | GCWGC | 9 cut(s) | 4, 7, 95, 167, 319, 322, 325, 524, 833 |
| ApoI | RAATTY | 1 cut(s) | 842 |
| Asp718I | GGTACC | 2 cut(s) | 134, 548 |
| AspA2I | CCTAGG | 1 cut(s) | 638 |
| AspLEI | GCGC | 4 cut(s) | 125, 296, 306, 340 |
| AspS9I | GGNCC | 3 cut(s) | 67, 989, 1011 |
| AsuC2I | CCSGG | 3 cut(s) | 258, 368, 390 |
| AsuHPI | GGTGA | 2 cut(s) | 370, 718 |
| AvaII | GGWCC | 2 cut(s) | 67, 989 |
| AvrII | CCTAGG | 1 cut(s) | 638 |
| BanI | GGYRCC | 3 cut(s) | 134, 293, 548 |
| BbvCI | CCTCAGC | 1 cut(s) | 969 |
| BbvI | GCAGC | 9 cut(s) | 16, 19, 82, 179, 331, 334, 337, 511, 820 |
| BccI | CCATC | 2 cut(s) | 69, 79 |
| BceAI | ACGGC | 3 cut(s) | 281, 942, 965 |
| BciT130I | CCWGG | 1 cut(s) | 460 |
| BclI | TGATCA | 1 cut(s) | 360 |
| BcnI | CCSGG | 3 cut(s) | 258, 368, 390 |
| BcoDI | GTCTC | 2 cut(s) | 226, 705 |
| BfaI | CTAG | 4 cut(s) | 15, 48, 639, 1040 |
| BfoI | RGCGCY | 2 cut(s) | 297, 341 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 864 |
| BlnI | CCTAGG | 1 cut(s) | 638 |
| Bme1390I | CCNGG | 4 cut(s) | 258, 368, 390, 460 |
| Bme18I | GGWCC | 2 cut(s) | 67, 989 |
| BmgT120I | GGNCC | 3 cut(s) | 67, 989, 1011 |
| BmiI | GGNNCC | 5 cut(s) | 69, 136, 295, 550, 991 |
| BmrFI | CCNGG | 4 cut(s) | 258, 368, 390, 460 |
| BmsI | GCATC | 4 cut(s) | 19, 841, 868, 947 |
| BpmI | CTGGAG | 3 cut(s) | 65, 819, 984 |
| Bpu10I | CCTNAGC | 1 cut(s) | 969 |
| BpuMI | CCSGG | 3 cut(s) | 258, 368, 390 |
| BsaHI | GRCGYC | 2 cut(s) | 243, 294 |
| BsaI | GGTCTC | 1 cut(s) | 226 |
| BsaJI | CCNNGG | 4 cut(s) | 256, 638, 862, 942 |
| BsaWI | WCCGGW | 1 cut(s) | 344 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 662, 663, 948 |
| Bse118I | RCCGGY | 5 cut(s) | 170, 290, 371, 545, 1013 |
| Bse1I | ACTGG | 2 cut(s) | 360, 967 |
| Bse3DI | GCAATG | 1 cut(s) | 519 |
| BseBI | CCWGG | 1 cut(s) | 460 |
| BseDI | CCNNGG | 4 cut(s) | 256, 638, 862, 942 |
| BseGI | GGATG | 4 cut(s) | 10, 363, 649, 938 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 662, 663, 948 |
| BseMI | GCAATG | 1 cut(s) | 519 |
| BseMII | CTCAG | 5 cut(s) | 33, 716, 768, 926, 960 |
| BseNI | ACTGG | 2 cut(s) | 360, 967 |
| BseRI | GAGGAG | 1 cut(s) | 888 |
| BseX3I | CGGCCG | 1 cut(s) | 369 |
| BseXI | GCAGC | 9 cut(s) | 16, 19, 82, 179, 331, 334, 337, 511, 820 |
| Bsh1236I | CGCG | 3 cut(s) | 32, 123, 306 |
| Bsh1285I | CGRYCG | 1 cut(s) | 372 |
| BshFI | GGCC | 4 cut(s) | 183, 371, 957, 1013 |
| BshNI | GGYRCC | 3 cut(s) | 134, 293, 548 |
| BsiEI | CGRYCG | 1 cut(s) | 372 |
| BsiWI | CGTACG | 1 cut(s) | 471 |
| BslFI | GGGAC | 4 cut(s) | 416, 642, 787, 975 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 662, 663, 948 |
| BsmAI | GTCTC | 2 cut(s) | 226, 705 |
| BsmFI | GGGAC | 4 cut(s) | 416, 642, 787, 975 |
| BsmI | GAATGC | 2 cut(s) | 759, 1050 |
| BsnI | GGCC | 4 cut(s) | 183, 371, 957, 1013 |
| Bso31I | GGTCTC | 1 cut(s) | 226 |
| Bsp143I | GATC | 4 cut(s) | 360, 441, 634, 745 |
| BspACI | CCGC | 6 cut(s) | 57, 109, 121, 138, 174, 306 |
| BspANI | GGCC | 4 cut(s) | 183, 371, 957, 1013 |
| BspCNI | CTCAG | 5 cut(s) | 32, 715, 769, 925, 961 |
| BspFNI | CGCG | 3 cut(s) | 32, 123, 306 |
| BspLI | GGNNCC | 5 cut(s) | 69, 136, 295, 550, 991 |
| BspPI | GGATC | 1 cut(s) | 629 |
| BspT107I | GGYRCC | 3 cut(s) | 134, 293, 548 |
| BspTNI | GGTCTC | 1 cut(s) | 226 |
| BsrDI | GCAATG | 1 cut(s) | 519 |
| BsrFI | RCCGGY | 5 cut(s) | 170, 290, 371, 545, 1013 |
| BsrI | ACTGG | 2 cut(s) | 360, 967 |
| BssAI | RCCGGY | 5 cut(s) | 170, 290, 371, 545, 1013 |
| BssECI | CCNNGG | 4 cut(s) | 256, 638, 862, 942 |
| BssMI | GATC | 4 cut(s) | 360, 441, 634, 745 |
| BssNI | GRCGYC | 2 cut(s) | 243, 294 |
| BssT1I | CCWWGG | 2 cut(s) | 638, 942 |
| Bst2UI | CCWGG | 1 cut(s) | 460 |
| Bst4CI | ACNGT | 3 cut(s) | 103, 514, 570 |
| Bst6I | CTCTTC | 1 cut(s) | 699 |
| BstACI | GRCGYC | 2 cut(s) | 243, 294 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 833 |
| BstC8I | GCNNGC | 8 cut(s) | 172, 185, 373, 377, 856, 869, 883, 1015 |
| BstDEI | CTNAG | 6 cut(s) | 19, 561, 702, 777, 912, 969 |
| BstF5I | GGATG | 4 cut(s) | 10, 363, 649, 938 |
| BstFNI | CGCG | 3 cut(s) | 32, 123, 306 |
| BstH2I | RGCGCY | 2 cut(s) | 297, 341 |
| BstHHI | GCGC | 4 cut(s) | 125, 296, 306, 340 |
| BstKTI | GATC | 4 cut(s) | 363, 444, 637, 748 |
| BstMAI | GTCTC | 2 cut(s) | 226, 705 |
| BstMBI | GATC | 4 cut(s) | 360, 441, 634, 745 |
| BstMCI | CGRYCG | 1 cut(s) | 372 |
| BstMWI | GCNNNNNNNGC | 7 cut(s) | 117, 180, 325, 809, 833, 864, 905 |
| BstNI | CCWGG | 1 cut(s) | 460 |
| BstNSI | RCATGY | 1 cut(s) | 858 |
| BstSCI | CCNGG | 4 cut(s) | 256, 366, 388, 458 |
| BstUI | CGCG | 3 cut(s) | 32, 123, 306 |
| BstV1I | GCAGC | 9 cut(s) | 16, 19, 82, 179, 331, 334, 337, 511, 820 |
| BstZI | CGGCCG | 1 cut(s) | 369 |
| BsuRI | GGCC | 4 cut(s) | 183, 371, 957, 1013 |
| BtsCI | GGATG | 4 cut(s) | 10, 363, 649, 938 |
| BtsIMutI | CAGTG | 3 cut(s) | 99, 451, 510 |
| Cac8I | GCNNGC | 8 cut(s) | 172, 185, 373, 377, 856, 869, 883, 1015 |
| CaiI | CAGNNNCTG | 2 cut(s) | 328, 465 |
| CfoI | GCGC | 4 cut(s) | 125, 296, 306, 340 |
| Cfr10I | RCCGGY | 5 cut(s) | 170, 290, 371, 545, 1013 |
| Cfr13I | GGNCC | 3 cut(s) | 67, 989, 1011 |
| Csp6I | GTAC | 5 cut(s) | 135, 472, 549, 947, 960 |
| CviAII | CATG | 6 cut(s) | 196, 283, 583, 671, 717, 855 |
| CviQI | GTAC | 5 cut(s) | 135, 472, 549, 947, 960 |
| DdeI | CTNAG | 6 cut(s) | 19, 561, 702, 777, 912, 969 |
| DinI | GGCGCC | 1 cut(s) | 295 |
| DpnI | GATC | 4 cut(s) | 362, 443, 636, 747 |
| DpnII | GATC | 4 cut(s) | 360, 441, 634, 745 |
| DraI | TTTAAA | 1 cut(s) | 537 |
| EaeI | YGGCCR | 2 cut(s) | 369, 955 |
| EagI | CGGCCG | 1 cut(s) | 369 |
| Eam1104I | CTCTTC | 1 cut(s) | 699 |
| EarI | CTCTTC | 1 cut(s) | 699 |
| EciI | GGCGGA | 1 cut(s) | 46 |
| EclXI | CGGCCG | 1 cut(s) | 369 |
| Eco130I | CCWWGG | 2 cut(s) | 638, 942 |
| Eco31I | GGTCTC | 1 cut(s) | 226 |
| Eco32I | GATATC | 1 cut(s) | 274 |
| Eco47I | GGWCC | 2 cut(s) | 67, 989 |
| Eco47III | AGCGCT | 1 cut(s) | 339 |
| Eco52I | CGGCCG | 1 cut(s) | 369 |
| Eco57I | CTGAAG | 1 cut(s) | 549 |
| EcoRII | CCWGG | 1 cut(s) | 458 |
| EcoRV | GATATC | 1 cut(s) | 274 |
| EcoT14I | CCWWGG | 2 cut(s) | 638, 942 |
| EcoT22I | ATGCAT | 1 cut(s) | 856 |
| EgeI | GGCGCC | 1 cut(s) | 295 |
| EheI | GGCGCC | 1 cut(s) | 295 |
| ErhI | CCWWGG | 2 cut(s) | 638, 942 |
| FaeI | CATG | 6 cut(s) | 199, 286, 586, 674, 720, 858 |
| FaqI | GGGAC | 4 cut(s) | 416, 642, 787, 975 |
| FatI | CATG | 6 cut(s) | 195, 282, 582, 670, 716, 854 |
| FauI | CCCGC | 1 cut(s) | 299 |
| FauNDI | CATATG | 1 cut(s) | 829 |
| FbaI | TGATCA | 1 cut(s) | 360 |
| FokI | GGATG | 3 cut(s) | 350, 656, 925 |
| FspBI | CTAG | 4 cut(s) | 15, 48, 639, 1040 |
| GlaI | GCGC | 4 cut(s) | 124, 295, 305, 339 |
| GsuI | CTGGAG | 3 cut(s) | 65, 819, 984 |
| HaeII | RGCGCY | 2 cut(s) | 297, 341 |
| HaeIII | GGCC | 4 cut(s) | 183, 371, 957, 1013 |
| HhaI | GCGC | 4 cut(s) | 125, 296, 306, 340 |
| Hin1I | GRCGYC | 2 cut(s) | 243, 294 |
| Hin1II | CATG | 6 cut(s) | 199, 286, 586, 674, 720, 858 |
| Hin6I | GCGC | 4 cut(s) | 123, 294, 304, 338 |
| HinP1I | GCGC | 4 cut(s) | 123, 294, 304, 338 |
| HincII | GTYRAC | 3 cut(s) | 106, 250, 484 |
| HindII | GTYRAC | 3 cut(s) | 106, 250, 484 |
| HinfI | GANTC | 2 cut(s) | 34, 51 |
| HpaI | GTTAAC | 2 cut(s) | 106, 484 |
| HphI | GGTGA | 2 cut(s) | 370, 718 |
| Hpy166II | GTNNAC | 5 cut(s) | 28, 106, 250, 484, 505 |
| Hpy188I | TCNGA | 7 cut(s) | 22, 164, 271, 765, 863, 1056, 1076 |
| Hpy188III | TCNNGA | 3 cut(s) | 65, 82, 436 |
| Hpy8I | GTNNAC | 5 cut(s) | 28, 106, 250, 484, 505 |
| Hpy99I | CGWCG | 3 cut(s) | 245, 248, 302 |
| HpyAV | CCTTC | 3 cut(s) | 940, 1018, 1051 |
| HpyCH4III | ACNGT | 3 cut(s) | 103, 514, 570 |
| HpyCH4IV | ACGT | 2 cut(s) | 243, 486 |
| HpyCH4V | TGCA | 7 cut(s) | 4, 674, 812, 848, 854, 899, 938 |
| HpyF10VI | GCNNNNNNNGC | 7 cut(s) | 117, 180, 325, 809, 833, 864, 905 |
| HpyF3I | CTNAG | 6 cut(s) | 19, 561, 702, 777, 912, 969 |
| HpySE526I | ACGT | 2 cut(s) | 243, 486 |
| Hsp92I | GRCGYC | 2 cut(s) | 243, 294 |
| Hsp92II | CATG | 6 cut(s) | 199, 286, 586, 674, 720, 858 |
| HspAI | GCGC | 4 cut(s) | 123, 294, 304, 338 |
| KasI | GGCGCC | 1 cut(s) | 293 |
| KpnI | GGTACC | 2 cut(s) | 138, 552 |
| KroI | GCCGGC | 3 cut(s) | 170, 371, 1013 |
| KroNI | GCCGGC | 3 cut(s) | 172, 373, 1015 |
| Ksp22I | TGATCA | 1 cut(s) | 360 |
| KspAI | GTTAAC | 2 cut(s) | 106, 484 |
| Kzo9I | GATC | 4 cut(s) | 360, 441, 634, 745 |
| LmnI | GCTCC | 3 cut(s) | 164, 800, 965 |
| Lsp1109I | GCAGC | 9 cut(s) | 16, 19, 82, 179, 331, 334, 337, 511, 820 |
| LweI | GCATC | 4 cut(s) | 19, 841, 868, 947 |
| MaeI | CTAG | 4 cut(s) | 15, 48, 639, 1040 |
| MaeII | ACGT | 2 cut(s) | 243, 486 |
| MaeIII | GTNAC | 5 cut(s) | 143, 262, 577, 679, 916 |
| MalI | GATC | 4 cut(s) | 362, 443, 636, 747 |
| MboI | GATC | 4 cut(s) | 360, 441, 634, 745 |
| MboII | GAAGA | 2 cut(s) | 217, 686 |
| MluCI | AATT | 4 cut(s) | 115, 429, 684, 842 |
| Mly113I | GGCGCC | 1 cut(s) | 294 |
| Mph1103I | ATGCAT | 1 cut(s) | 856 |
| MroNI | GCCGGC | 3 cut(s) | 170, 371, 1013 |
| MseI | TTAA | 6 cut(s) | 105, 414, 483, 536, 708, 840 |
| MslI | CAYNNNNRTG | 1 cut(s) | 200 |
| MspA1I | CMGCKG | 2 cut(s) | 140, 328 |
| MspR9I | CCNGG | 4 cut(s) | 258, 368, 390, 460 |
| Mva1269I | GAATGC | 2 cut(s) | 759, 1050 |
| MvaI | CCWGG | 1 cut(s) | 460 |
| MvnI | CGCG | 3 cut(s) | 32, 123, 306 |
| MwoI | GCNNNNNNNGC | 7 cut(s) | 117, 180, 325, 809, 833, 864, 905 |
| NaeI | GCCGGC | 3 cut(s) | 172, 373, 1015 |
| NarI | GGCGCC | 1 cut(s) | 294 |
| NciI | CCSGG | 3 cut(s) | 258, 368, 390 |
| NdeI | CATATG | 1 cut(s) | 829 |
| NdeII | GATC | 4 cut(s) | 360, 441, 634, 745 |
| NgoMIV | GCCGGC | 3 cut(s) | 170, 371, 1013 |
| NlaIII | CATG | 6 cut(s) | 199, 286, 586, 674, 720, 858 |
| NlaIV | GGNNCC | 5 cut(s) | 69, 136, 295, 550, 991 |
| NsiI | ATGCAT | 1 cut(s) | 856 |
| NspI | RCATGY | 1 cut(s) | 858 |
| PaeI | GCATGC | 1 cut(s) | 858 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 654, 955 |
| PctI | GAATGC | 2 cut(s) | 759, 1050 |
| PdiI | GCCGGC | 3 cut(s) | 172, 373, 1015 |
| PfeI | GAWTC | 2 cut(s) | 34, 51 |
| Pfl23II | CGTACG | 1 cut(s) | 471 |
| PflFI | GACNNNGTC | 1 cut(s) | 245 |
| PluTI | GGCGCC | 1 cut(s) | 297 |
| Psp6I | CCWGG | 1 cut(s) | 458 |
| PspGI | CCWGG | 1 cut(s) | 458 |
| PspLI | CGTACG | 1 cut(s) | 471 |
| PspN4I | GGNNCC | 5 cut(s) | 69, 136, 295, 550, 991 |
| PspPI | GGNCC | 3 cut(s) | 67, 989, 1011 |
| PstNI | CAGNNNCTG | 2 cut(s) | 328, 465 |
| PsyI | GACNNNGTC | 1 cut(s) | 245 |
| PvuII | CAGCTG | 1 cut(s) | 328 |
| RsaI | GTAC | 5 cut(s) | 136, 473, 550, 948, 961 |
| RsaNI | GTAC | 5 cut(s) | 135, 472, 549, 947, 960 |
| RseI | CAYNNNNRTG | 1 cut(s) | 200 |
| SaqAI | TTAA | 6 cut(s) | 105, 414, 483, 536, 708, 840 |
| Sau3AI | GATC | 4 cut(s) | 360, 441, 634, 745 |
| Sau96I | GGNCC | 3 cut(s) | 67, 989, 1011 |
| ScrFI | CCNGG | 4 cut(s) | 258, 368, 390, 460 |
| SfaNI | GCATC | 4 cut(s) | 19, 841, 868, 947 |
| SfoI | GGCGCC | 1 cut(s) | 295 |
| SgrAI | CRCCGGYG | 1 cut(s) | 290 |
| SinI | GGWCC | 2 cut(s) | 67, 989 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 200 |
| SphI | GCATGC | 1 cut(s) | 858 |
| Sse9I | AATT | 4 cut(s) | 115, 429, 684, 842 |
| SsiI | CCGC | 6 cut(s) | 57, 109, 121, 138, 174, 306 |
| SspDI | GGCGCC | 1 cut(s) | 293 |
| SspMI | CTAG | 4 cut(s) | 15, 48, 639, 1040 |
| StyD4I | CCNGG | 4 cut(s) | 256, 366, 388, 458 |
| StyI | CCWWGG | 2 cut(s) | 638, 942 |
| TaaI | ACNGT | 3 cut(s) | 103, 514, 570 |
| TaiI | ACGT | 2 cut(s) | 246, 489 |
| TaqI | TCGA | 2 cut(s) | 382, 891 |
| TasI | AATT | 4 cut(s) | 115, 429, 684, 842 |
| TauI | GCSGC | 2 cut(s) | 123, 177 |
| TfiI | GAWTC | 2 cut(s) | 34, 51 |
| Tru1I | TTAA | 6 cut(s) | 105, 414, 483, 536, 708, 840 |
| Tru9I | TTAA | 6 cut(s) | 105, 414, 483, 536, 708, 840 |
| TscAI | CASTG | 3 cut(s) | 106, 451, 517 |
| TseI | GCWGC | 9 cut(s) | 4, 7, 95, 167, 319, 322, 325, 524, 833 |
| TspDTI | ATGAA | 2 cut(s) | 218, 224 |
| TspGWI | ACGGA | 3 cut(s) | 55, 214, 459 |
| TspRI | CASTG | 3 cut(s) | 106, 451, 517 |
| Tth111I | GACNNNGTC | 1 cut(s) | 245 |
| VpaK11BI | GGWCC | 2 cut(s) | 67, 989 |
| XapI | RAATTY | 1 cut(s) | 842 |
| XceI | RCATGY | 1 cut(s) | 858 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 610 |
| XmaJI | CCTAGG | 1 cut(s) | 638 |
| XspI | CTAG | 4 cut(s) | 15, 48, 639, 1040 |
| ZraI | GACGTC | 1 cut(s) | 244 |
| Zsp2I | ATGCAT | 1 cut(s) | 856 |