Malate dehydrogenase
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G22780 |
| fragaria_vesca | FvH4_1g18690 FvH4_1g18690 FvH4_1g18690 |
| malus_domestica | MD02G1194500.v1.1 MD15G1304800.v1.1 |
| prunus_persica | Prupe.6G212400_v2.0.a1 Prupe.6G212400_v2.0.a1 |
| pyrus_communis | pycom02g15840 pycom15g26720 |
| rosa_chinensis | RchiOBHm_Chr2g0109561 |
| rosa_laevigata | RLG00000017745 |
| rosa_multiflora | Rmu_sc0000332.1_g000042 |
| rosa_roxburghii | Rroxscaffold_2G00134150 |
| rosa_rugosa | Rorug02G0160600 |
| rosa_samantha | Rh2BG223200 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AatII | GACGTC | 1 cut(s) | 234 |
| AccB1I | GGYRCC | 1 cut(s) | 281 |
| AccBSI | CCGCTC | 1 cut(s) | 155 |
| AccII | CGCG | 5 cut(s) | 20, 111, 125, 143, 294 |
| AciI | CCGC | 5 cut(s) | 109, 120, 155, 294, 553 |
| AclWI | GGATC | 1 cut(s) | 617 |
| AcoI | YGGCCR | 5 cut(s) | 46, 156, 180, 357, 943 |
| AcsI | RAATTY | 2 cut(s) | 64, 830 |
| AcuI | CTGAAG | 1 cut(s) | 1064 |
| AcyI | GRCGYC | 4 cut(s) | 81, 231, 249, 867 |
| AfaI | GTAC | 2 cut(s) | 936, 949 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 76, 100, 115, 650 |
| AflII | CTTAAG | 1 cut(s) | 856 |
| AgeI | ACCGGT | 1 cut(s) | 278 |
| AgsI | TTSAA | 3 cut(s) | 136, 526, 881 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 542, 574 |
| AluBI | AGCT | 6 cut(s) | 12, 316, 326, 343, 785, 791 |
| AluI | AGCT | 6 cut(s) | 12, 316, 326, 343, 785, 791 |
| Alw21I | GWGCWC | 1 cut(s) | 14 |
| Alw26I | GTCTC | 2 cut(s) | 214, 693 |
| AlwI | GGATC | 1 cut(s) | 617 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 178, 316 |
| AoxI | GGCC | 6 cut(s) | 46, 156, 180, 357, 943, 976 |
| ApeKI | GCWGC | 5 cut(s) | 307, 310, 313, 512, 821 |
| ApoI | RAATTY | 2 cut(s) | 64, 830 |
| AscI | GGCGCGCC | 1 cut(s) | 123 |
| AsiGI | ACCGGT | 1 cut(s) | 278 |
| AspA2I | CCTAGG | 2 cut(s) | 368, 626 |
| AspLEI | GCGC | 4 cut(s) | 113, 125, 127, 294 |
| AspS9I | GGNCC | 1 cut(s) | 977 |
| AsuC2I | CCSGG | 5 cut(s) | 85, 129, 160, 246, 378 |
| AsuHPI | GGTGA | 4 cut(s) | 244, 358, 706, 916 |
| AvrII | CCTAGG | 2 cut(s) | 368, 626 |
| BalI | TGGCCA | 1 cut(s) | 182 |
| BanI | GGYRCC | 1 cut(s) | 281 |
| BanII | GRGCYC | 1 cut(s) | 14 |
| Bbv12I | GWGCWC | 1 cut(s) | 14 |
| BbvCI | CCTCAGC | 1 cut(s) | 516 |
| BbvI | GCAGC | 5 cut(s) | 319, 322, 325, 499, 808 |
| BccI | CCATC | 2 cut(s) | 57, 67 |
| BceAI | ACGGC | 3 cut(s) | 269, 930, 953 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 87, 121 |
| BcnI | CCSGG | 5 cut(s) | 85, 129, 160, 246, 378 |
| BcoDI | GTCTC | 2 cut(s) | 214, 693 |
| BfaI | CTAG | 4 cut(s) | 36, 369, 387, 627 |
| BfmI | CTRYAG | 1 cut(s) | 465 |
| BfrI | CTTAAG | 1 cut(s) | 856 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 852 |
| BisI | GCNGC | 9 cut(s) | 109, 121, 156, 308, 311, 314, 513, 554, 822 |
| BlnI | CCTAGG | 2 cut(s) | 368, 626 |
| BlsI | GCNGC | 9 cut(s) | 110, 122, 157, 309, 312, 315, 514, 555, 823 |
| Bme1390I | CCNGG | 5 cut(s) | 85, 129, 160, 246, 378 |
| BmgT120I | GGNCC | 1 cut(s) | 977 |
| BmiI | GGNNCC | 3 cut(s) | 283, 504, 979 |
| BmrFI | CCNGG | 5 cut(s) | 85, 129, 160, 246, 378 |
| BmsI | GCATC | 2 cut(s) | 829, 935 |
| BoxI | GACNNNNGTC | 1 cut(s) | 21 |
| BplI | GAGNNNNNCTC | 1 cut(s) | 28 |
| BpmI | CTGGAG | 4 cut(s) | 338, 684, 807, 972 |
| Bpu10I | CCTNAGC | 1 cut(s) | 516 |
| BpuMI | CCSGG | 5 cut(s) | 85, 129, 160, 246, 378 |
| BsaHI | GRCGYC | 4 cut(s) | 81, 231, 249, 867 |
| BsaJI | CCNNGG | 6 cut(s) | 114, 159, 244, 285, 368, 626 |
| BsaWI | WCCGGW | 2 cut(s) | 278, 505 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 76, 100, 115, 650 |
| Bse118I | RCCGGY | 3 cut(s) | 278, 359, 869 |
| Bse1I | ACTGG | 2 cut(s) | 105, 955 |
| BseDI | CCNNGG | 6 cut(s) | 114, 159, 244, 285, 368, 626 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 76, 100, 115, 650 |
| BseMII | CTCAG | 6 cut(s) | 27, 74, 507, 704, 756, 914 |
| BseNI | ACTGG | 2 cut(s) | 105, 955 |
| BsePI | GCGCGC | 1 cut(s) | 123 |
| BseX3I | CGGCCG | 2 cut(s) | 156, 357 |
| BseXI | GCAGC | 5 cut(s) | 319, 322, 325, 499, 808 |
| BseYI | CCCAGC | 1 cut(s) | 533 |
| Bsh1236I | CGCG | 5 cut(s) | 20, 111, 125, 143, 294 |
| Bsh1285I | CGRYCG | 2 cut(s) | 159, 360 |
| BshFI | GGCC | 6 cut(s) | 48, 158, 182, 359, 945, 978 |
| BshNI | GGYRCC | 1 cut(s) | 281 |
| BshTI | ACCGGT | 1 cut(s) | 278 |
| BsiEI | CGRYCG | 2 cut(s) | 159, 360 |
| BsiHKAI | GWGCWC | 1 cut(s) | 14 |
| BslFI | GGGAC | 5 cut(s) | 100, 441, 550, 626, 878 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 76, 100, 115, 650 |
| BsmAI | GTCTC | 2 cut(s) | 214, 693 |
| BsmBI | CGTCTC | 1 cut(s) | 214 |
| BsmFI | GGGAC | 5 cut(s) | 100, 441, 550, 626, 878 |
| BsmI | GAATGC | 2 cut(s) | 747, 1038 |
| BsnI | GGCC | 6 cut(s) | 48, 158, 182, 359, 945, 978 |
| Bsp1286I | GDGCHC | 1 cut(s) | 14 |
| Bsp143I | GATC | 3 cut(s) | 330, 622, 742 |
| Bsp68I | TCGCGA | 1 cut(s) | 143 |
| BspACI | CCGC | 5 cut(s) | 109, 120, 155, 294, 553 |
| BspANI | GGCC | 6 cut(s) | 48, 158, 182, 359, 945, 978 |
| BspCNI | CTCAG | 6 cut(s) | 26, 73, 508, 703, 757, 913 |
| BspFNI | CGCG | 5 cut(s) | 20, 111, 125, 143, 294 |
| BspLI | GGNNCC | 3 cut(s) | 283, 504, 979 |
| BspPI | GGATC | 1 cut(s) | 617 |
| BspT107I | GGYRCC | 1 cut(s) | 281 |
| BspTI | CTTAAG | 1 cut(s) | 856 |
| BsrBI | CCGCTC | 1 cut(s) | 155 |
| BsrFI | RCCGGY | 3 cut(s) | 278, 359, 869 |
| BsrI | ACTGG | 2 cut(s) | 105, 955 |
| BssAI | RCCGGY | 3 cut(s) | 278, 359, 869 |
| BssECI | CCNNGG | 6 cut(s) | 114, 159, 244, 285, 368, 626 |
| BssHII | GCGCGC | 1 cut(s) | 123 |
| BssMI | GATC | 3 cut(s) | 330, 622, 742 |
| BssNI | GRCGYC | 4 cut(s) | 81, 231, 249, 867 |
| BssT1I | CCWWGG | 3 cut(s) | 114, 368, 626 |
| Bst4CI | ACNGT | 1 cut(s) | 502 |
| Bst6I | CTCTTC | 1 cut(s) | 687 |
| BstACI | GRCGYC | 4 cut(s) | 81, 231, 249, 867 |
| BstAFI | CTTAAG | 1 cut(s) | 856 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 821 |
| BstC8I | GCNNGC | 4 cut(s) | 125, 361, 365, 844 |
| BstDEI | CTNAG | 6 cut(s) | 13, 60, 516, 690, 765, 900 |
| BstDSI | CCRYGG | 1 cut(s) | 285 |
| BstFNI | CGCG | 5 cut(s) | 20, 111, 125, 143, 294 |
| BstHHI | GCGC | 4 cut(s) | 113, 125, 127, 294 |
| BstKTI | GATC | 3 cut(s) | 333, 625, 745 |
| BstMAI | GTCTC | 2 cut(s) | 214, 693 |
| BstMBI | GATC | 3 cut(s) | 330, 622, 742 |
| BstMCI | CGRYCG | 2 cut(s) | 159, 360 |
| BstMWI | GCNNNNNNNGC | 6 cut(s) | 117, 313, 797, 821, 852, 893 |
| BstNSI | RCATGY | 1 cut(s) | 846 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 21 |
| BstSCI | CCNGG | 5 cut(s) | 83, 127, 158, 244, 376 |
| BstSFI | CTRYAG | 1 cut(s) | 465 |
| BstUI | CGCG | 5 cut(s) | 20, 111, 125, 143, 294 |
| BstV1I | GCAGC | 5 cut(s) | 319, 322, 325, 499, 808 |
| BstZI | CGGCCG | 2 cut(s) | 156, 357 |
| BsuRI | GGCC | 6 cut(s) | 48, 158, 182, 359, 945, 978 |
| BtgI | CCRYGG | 1 cut(s) | 285 |
| BtuMI | TCGCGA | 1 cut(s) | 143 |
| Cac8I | GCNNGC | 4 cut(s) | 125, 361, 365, 844 |
| CaiI | CAGNNNCTG | 2 cut(s) | 178, 316 |
| CfoI | GCGC | 4 cut(s) | 113, 125, 127, 294 |
| Cfr10I | RCCGGY | 3 cut(s) | 278, 359, 869 |
| Cfr13I | GGNCC | 1 cut(s) | 977 |
| CseI | GACGC | 6 cut(s) | 26, 89, 238, 436, 785, 875 |
| Csp6I | GTAC | 2 cut(s) | 935, 948 |
| CspAI | ACCGGT | 1 cut(s) | 278 |
| CviAII | CATG | 6 cut(s) | 184, 271, 571, 659, 705, 843 |
| CviQI | GTAC | 2 cut(s) | 935, 948 |
| DdeI | CTNAG | 6 cut(s) | 13, 60, 516, 690, 765, 900 |
| DpnI | GATC | 3 cut(s) | 332, 624, 744 |
| DpnII | GATC | 3 cut(s) | 330, 622, 742 |
| EaeI | YGGCCR | 5 cut(s) | 46, 156, 180, 357, 943 |
| EagI | CGGCCG | 2 cut(s) | 156, 357 |
| Eam1104I | CTCTTC | 1 cut(s) | 687 |
| EarI | CTCTTC | 1 cut(s) | 687 |
| Ecl136II | GAGCTC | 1 cut(s) | 12 |
| EclXI | CGGCCG | 2 cut(s) | 156, 357 |
| Eco130I | CCWWGG | 3 cut(s) | 114, 368, 626 |
| Eco24I | GRGCYC | 1 cut(s) | 14 |
| Eco52I | CGGCCG | 2 cut(s) | 156, 357 |
| Eco53kI | GAGCTC | 1 cut(s) | 12 |
| Eco57I | CTGAAG | 1 cut(s) | 1064 |
| EcoICRI | GAGCTC | 1 cut(s) | 12 |
| EcoT14I | CCWWGG | 3 cut(s) | 114, 368, 626 |
| EcoT22I | ATGCAT | 1 cut(s) | 844 |
| EcoT38I | GRGCYC | 1 cut(s) | 14 |
| ErhI | CCWWGG | 3 cut(s) | 114, 368, 626 |
| Esp3I | CGTCTC | 1 cut(s) | 214 |
| FaeI | CATG | 6 cut(s) | 187, 274, 574, 662, 708, 846 |
| FaqI | GGGAC | 5 cut(s) | 100, 441, 550, 626, 878 |
| FatI | CATG | 6 cut(s) | 183, 270, 570, 658, 704, 842 |
| FauI | CCCGC | 1 cut(s) | 287 |
| Fnu4HI | GCNGC | 9 cut(s) | 109, 121, 156, 308, 311, 314, 513, 554, 822 |
| FriOI | GRGCYC | 1 cut(s) | 14 |
| Fsp4HI | GCNGC | 9 cut(s) | 109, 121, 156, 308, 311, 314, 513, 554, 822 |
| FspBI | CTAG | 4 cut(s) | 36, 369, 387, 627 |
| GlaI | GCGC | 4 cut(s) | 112, 124, 126, 293 |
| GluI | GCNGC | 9 cut(s) | 109, 121, 156, 308, 311, 314, 513, 554, 822 |
| GsaI | CCCAGC | 1 cut(s) | 537 |
| GsuI | CTGGAG | 4 cut(s) | 338, 684, 807, 972 |
| HaeIII | GGCC | 6 cut(s) | 48, 158, 182, 359, 945, 978 |
| HgaI | GACGC | 6 cut(s) | 26, 89, 238, 436, 785, 875 |
| HhaI | GCGC | 4 cut(s) | 113, 125, 127, 294 |
| Hin1I | GRCGYC | 4 cut(s) | 81, 231, 249, 867 |
| Hin1II | CATG | 6 cut(s) | 187, 274, 574, 662, 708, 846 |
| Hin6I | GCGC | 4 cut(s) | 111, 123, 125, 292 |
| HinP1I | GCGC | 4 cut(s) | 111, 123, 125, 292 |
| HincII | GTYRAC | 4 cut(s) | 26, 238, 472, 775 |
| HindII | GTYRAC | 4 cut(s) | 26, 238, 472, 775 |
| HindIII | AAGCTT | 1 cut(s) | 324 |
| HinfI | GANTC | 4 cut(s) | 5, 22, 39, 88 |
| HpaI | GTTAAC | 2 cut(s) | 238, 472 |
| HphI | GGTGA | 4 cut(s) | 244, 358, 706, 916 |
| Hpy166II | GTNNAC | 5 cut(s) | 26, 238, 472, 493, 775 |
| Hpy188I | TCNGA | 7 cut(s) | 16, 63, 259, 335, 753, 1044, 1064 |
| Hpy188III | TCNNGA | 4 cut(s) | 53, 70, 142, 620 |
| Hpy8I | GTNNAC | 5 cut(s) | 26, 238, 472, 493, 775 |
| Hpy99I | CGWCG | 2 cut(s) | 233, 236 |
| HpyAV | CCTTC | 6 cut(s) | 227, 431, 857, 925, 1006, 1039 |
| HpyCH4III | ACNGT | 1 cut(s) | 502 |
| HpyCH4IV | ACGT | 1 cut(s) | 231 |
| HpyCH4V | TGCA | 5 cut(s) | 800, 836, 842, 887, 926 |
| HpyF10VI | GCNNNNNNNGC | 6 cut(s) | 117, 313, 797, 821, 852, 893 |
| HpyF3I | CTNAG | 6 cut(s) | 13, 60, 516, 690, 765, 900 |
| HpySE526I | ACGT | 1 cut(s) | 231 |
| Hsp92I | GRCGYC | 4 cut(s) | 81, 231, 249, 867 |
| Hsp92II | CATG | 6 cut(s) | 187, 274, 574, 662, 708, 846 |
| HspAI | GCGC | 4 cut(s) | 111, 123, 125, 292 |
| KroI | GCCGGC | 1 cut(s) | 359 |
| KroNI | GCCGGC | 1 cut(s) | 361 |
| KspAI | GTTAAC | 2 cut(s) | 238, 472 |
| Kzo9I | GATC | 3 cut(s) | 330, 622, 742 |
| LmnI | GCTCC | 3 cut(s) | 152, 340, 788 |
| Lsp1109I | GCAGC | 5 cut(s) | 319, 322, 325, 499, 808 |
| LweI | GCATC | 2 cut(s) | 829, 935 |
| MaeI | CTAG | 4 cut(s) | 36, 369, 387, 627 |
| MaeII | ACGT | 1 cut(s) | 231 |
| MaeIII | GTNAC | 4 cut(s) | 250, 565, 667, 904 |
| MalI | GATC | 3 cut(s) | 332, 624, 744 |
| MbiI | CCGCTC | 1 cut(s) | 155 |
| MboI | GATC | 3 cut(s) | 330, 622, 742 |
| MboII | GAAGA | 2 cut(s) | 205, 674 |
| MhlI | GDGCHC | 1 cut(s) | 14 |
| MlsI | TGGCCA | 1 cut(s) | 182 |
| MluCI | AATT | 6 cut(s) | 64, 351, 417, 441, 830, 1025 |
| MluNI | TGGCCA | 1 cut(s) | 182 |
| MlyI | GAGTC | 3 cut(s) | 14, 31, 82 |
| Mox20I | TGGCCA | 1 cut(s) | 182 |
| Mph1103I | ATGCAT | 1 cut(s) | 844 |
| MroNI | GCCGGC | 1 cut(s) | 359 |
| MscI | TGGCCA | 1 cut(s) | 182 |
| MseI | TTAA | 6 cut(s) | 237, 402, 471, 696, 828, 857 |
| MslI | CAYNNNNRTG | 1 cut(s) | 188 |
| Msp20I | TGGCCA | 1 cut(s) | 182 |
| MspA1I | CMGCKG | 1 cut(s) | 316 |
| MspCI | CTTAAG | 1 cut(s) | 856 |
| MspR9I | CCNGG | 5 cut(s) | 85, 129, 160, 246, 378 |
| Mva1269I | GAATGC | 2 cut(s) | 747, 1038 |
| MvnI | CGCG | 5 cut(s) | 20, 111, 125, 143, 294 |
| MwoI | GCNNNNNNNGC | 6 cut(s) | 117, 313, 797, 821, 852, 893 |
| NaeI | GCCGGC | 1 cut(s) | 361 |
| NciI | CCSGG | 5 cut(s) | 85, 129, 160, 246, 378 |
| NdeII | GATC | 3 cut(s) | 330, 622, 742 |
| NgoMIV | GCCGGC | 1 cut(s) | 359 |
| NlaIII | CATG | 6 cut(s) | 187, 274, 574, 662, 708, 846 |
| NlaIV | GGNNCC | 3 cut(s) | 283, 504, 979 |
| NmuCI | GTSAC | 2 cut(s) | 250, 904 |
| NruI | TCGCGA | 1 cut(s) | 143 |
| NsiI | ATGCAT | 1 cut(s) | 844 |
| NspI | RCATGY | 1 cut(s) | 846 |
| PaeI | GCATGC | 1 cut(s) | 846 |
| PalAI | GGCGCGCC | 1 cut(s) | 123 |
| PauI | GCGCGC | 1 cut(s) | 123 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 943 |
| PctI | GAATGC | 2 cut(s) | 747, 1038 |
| PdiI | GCCGGC | 1 cut(s) | 361 |
| PfeI | GAWTC | 1 cut(s) | 39 |
| PinAI | ACCGGT | 1 cut(s) | 278 |
| PkrI | GCNGC | 9 cut(s) | 110, 122, 157, 309, 312, 315, 514, 555, 823 |
| PleI | GAGTC | 3 cut(s) | 13, 30, 82 |
| PpsI | GAGTC | 3 cut(s) | 13, 30, 82 |
| PshAI | GACNNNNGTC | 1 cut(s) | 21 |
| Psp124BI | GAGCTC | 1 cut(s) | 14 |
| PspFI | CCCAGC | 1 cut(s) | 533 |
| PspN4I | GGNNCC | 3 cut(s) | 283, 504, 979 |
| PspPI | GGNCC | 1 cut(s) | 977 |
| PstNI | CAGNNNCTG | 2 cut(s) | 178, 316 |
| PteI | GCGCGC | 1 cut(s) | 123 |
| PvuII | CAGCTG | 1 cut(s) | 316 |
| RruI | TCGCGA | 1 cut(s) | 143 |
| RsaI | GTAC | 2 cut(s) | 936, 949 |
| RsaNI | GTAC | 2 cut(s) | 935, 948 |
| RseI | CAYNNNNRTG | 1 cut(s) | 188 |
| SacI | GAGCTC | 1 cut(s) | 14 |
| SaqAI | TTAA | 6 cut(s) | 237, 402, 471, 696, 828, 857 |
| SatI | GCNGC | 9 cut(s) | 109, 121, 156, 308, 311, 314, 513, 554, 822 |
| Sau3AI | GATC | 3 cut(s) | 330, 622, 742 |
| Sau96I | GGNCC | 1 cut(s) | 977 |
| SchI | GAGTC | 3 cut(s) | 14, 31, 82 |
| ScrFI | CCNGG | 5 cut(s) | 85, 129, 160, 246, 378 |
| SduI | GDGCHC | 1 cut(s) | 14 |
| SfaNI | GCATC | 2 cut(s) | 829, 935 |
| SfcI | CTRYAG | 1 cut(s) | 465 |
| SgrAI | CRCCGGYG | 2 cut(s) | 278, 869 |
| SgsI | GGCGCGCC | 1 cut(s) | 123 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 188 |
| SmlI | CTYRAG | 1 cut(s) | 856 |
| SmoI | CTYRAG | 1 cut(s) | 856 |
| SphI | GCATGC | 1 cut(s) | 846 |
| Sse9I | AATT | 6 cut(s) | 64, 351, 417, 441, 830, 1025 |
| SsiI | CCGC | 5 cut(s) | 109, 120, 155, 294, 553 |
| SspMI | CTAG | 4 cut(s) | 36, 369, 387, 627 |
| SstI | GAGCTC | 1 cut(s) | 14 |
| StyD4I | CCNGG | 5 cut(s) | 83, 127, 158, 244, 376 |
| StyI | CCWWGG | 3 cut(s) | 114, 368, 626 |
| TaaI | ACNGT | 1 cut(s) | 502 |
| TaiI | ACGT | 1 cut(s) | 234 |
| TaqI | TCGA | 4 cut(s) | 8, 54, 543, 929 |
| TasI | AATT | 6 cut(s) | 64, 351, 417, 441, 830, 1025 |
| TauI | GCSGC | 4 cut(s) | 111, 123, 158, 556 |
| TfiI | GAWTC | 1 cut(s) | 39 |
| Tru1I | TTAA | 6 cut(s) | 237, 402, 471, 696, 828, 857 |
| Tru9I | TTAA | 6 cut(s) | 237, 402, 471, 696, 828, 857 |
| TseFI | GTSAC | 2 cut(s) | 250, 904 |
| TseI | GCWGC | 5 cut(s) | 307, 310, 313, 512, 821 |
| Tsp45I | GTSAC | 2 cut(s) | 250, 904 |
| TspDTI | ATGAA | 5 cut(s) | 206, 209, 212, 719, 1048 |
| TspGWI | ACGGA | 2 cut(s) | 43, 202 |
| Vha464I | CTTAAG | 1 cut(s) | 856 |
| XapI | RAATTY | 2 cut(s) | 64, 830 |
| XceI | RCATGY | 1 cut(s) | 846 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 598 |
| XmaJI | CCTAGG | 2 cut(s) | 368, 626 |
| XspI | CTAG | 4 cut(s) | 36, 369, 387, 627 |
| ZraI | GACGTC | 1 cut(s) | 232 |
| Zsp2I | ATGCAT | 1 cut(s) | 844 |