Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr15

Orthogroup ID

OG0015200

Physical Location & Seq

Genomic Coordinates Reverse (-)

42259451 .. 42260992

Gene Structure 1542 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD15G1353200.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1542 bp

ATGACCCAGTTGCTGTTGAGCTCAGCTATGGCTATTGCCATTGATGGGCATGACCTCGATCTCGATTTATCCGGCTCCAGCACCACCACCACAAGCACCAACACCGTTTCCACCGACAACTGGTACAACTGGTCTCCGGTGGTGGACTGGGATGCTCTGGAACCGACGGACCATCTCACGGGCGAAGACTTTCATGGGCTCATTGAGTCGATGATGGAAGACCAAGACGGCAGCACCGAGGTGAACTTGTCGTCGGCCCAGAACGAGCATCTAGAATTAGAAGCATCTAATGACACAACGTCGTCGGCAGAAATGATGACGTTAACGGACGAAGATGGCAGCGCTAACGGCGAGGACTCGAAGGGGTTGAGGCTTGTCCATCTGTTGATGGCGGCGGCGGAGGCGCTGACCGGCGCAAACAAGAGCCGAGATTTGGCTCGGGTGATATTGTTTCGGCTCAAGGAGTTGGTCTCTCCAACTGACGGTTCTAACATGGAGAGGTTGGCGGCGTATTTTACCGAGGCCCTCCAGGGTTTGCTAGAAGGCGCCGGGGGTTTGCATGGTAAGAATTTGATTGGGAATGGGGCCTACCGCGATCACGGCCACCATCCGACTGACGACGTGATCGCTGCGTTTCAACTGCTCCAGGACATGTCGCCTTATGTTAAGTTTGGGCACTTCACAGCGAATCAGGCGATTTTAGAGGCCGTGGCCCACGATAGCCGGGTCCACGTTGTGGATTATGACATCATGGAAGGGATCCAATGGGCATCGTTGATGCAGGCCTTGGTATCCCGGAAGGAGGGCCCACCTACCCCACATCTTAGGATCACGGCCTTGTCGAGGGGTGGCAGCGGGAGGCGGTCGATCGGGACTGTTCAAGAGACCGGTCGTCGTTTGACCGCATTTGCAGTGTCGATTGGTCAGCCATTTTCTTTTCACCAATGTAGATTGGATTCTGATGAGACGTTTCGACCGTCCGCTTTGAAATTAGTTAAAGGAGAGGCCTTGGTGATCAATTGTATGCTAAACCTCCCACATTTTAATTACCGTTCTCAAGATTCAATTGCTTCGTTTTTATCTGGATCCAAGACCCTTAATCCGAGACTAGTCACTTTAGTCGAGGAAGAAGTGCGGCCAGCAGGGGACGGAGGCTTTGTGGCCCGCTTCATGGATTCATTGTATCATTACTCGGCGGTATACGACTCCCTCGAGGCCGGCTTCCCAATGCAAAACCGAGCCCGAGCCCTAGTGGAGAGAGTGTTCTTGGGCCCTCGAATAGCCGGGTCATTAGCTCGTATCTACCGTGCTAATGAGGAAGTGGGTTGCTCTTGGTGGGAGTGGTTGGGCGCAGTAGGGTTTAAGCCAATGCCAATAAGCTTTGCCAATCATTGTCAAGCAAAACTTTTGTTGGGTTTATTTAATGATGGTTATAGGGCGGAGGAGGTGGCCAATCATAGGCTGGTTTTAGGTTGGAAGTCTCGTTGCTTACTCTCAGCCTCCATTTGGATGTCACCCTCAGAACCTGATGTTATCAATTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005635 GO:0005737 GO:0005783 GO:0006355 GO:0008150 GO:0009889 GO:0010468 GO:0010556 GO:0012505 GO:0016020 GO:0019219 GO:0019222 GO:0031090 GO:0031323 GO:0031326 GO:0031965 GO:0031967 GO:0031975 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043565 GO:0044422 GO:0044424 GO:0044428 GO:0044444 GO:0044446 GO:0044464 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0060255 GO:0065007 GO:0080090 GO:0097159 GO:0140110 GO:1901363 GO:1903506 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

GRAS

Protein Analysis

514

Amino Acids

56.24

Weight (kDa)

5.13

Isoelectric Point (pI)

34.87

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
GRAS	PF03514	125 - 503	4.9e-102	GRAS domain family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0015200)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G08250
fragaria_vesca	FvH4_2g26540
malus_domestica	MD08G1167600.v1.1 MD15G1353200.v1.1
prunus_persica	Prupe.1G501500_v2.0.a1
rosa_chinensis	RchiOBHm_Chr6g0295411
rosa_laevigata	RLG00000011806
rosa_multiflora	Rmu_co8465007.1_g000001 Rmu_sc0003058.1_g000004
rosa_roxburghii	Rroxscaffold_7G00172520
rosa_rugosa	Rorug06G0250400
rosa_samantha	Rh6AG363800 Rh6BG372000 Rh6CG378400 Rh6DG364800
rosa_wichuraiana	Rw6G031760

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AbsI	CCTCGAGG	1 cut(s)	1211
AccB1I	GGYRCC	1 cut(s)	545
AccB7I	CCANNNNNTGG	1 cut(s)	736
AccI	GTMKAC	1 cut(s)	1200
AccII	CGCG	1 cut(s)	594
AclWI	GGATC	5 cut(s)	754, 767, 836, 1080, 1093
AcoI	YGGCCR	3 cut(s)	601, 1136, 1449
AcsI	RAATTY	1 cut(s)	568
AcyI	GRCGYC	1 cut(s)	546
AdeI	CACNNNGTG	1 cut(s)	736
AfaI	GTAC	1 cut(s)	125
AfeI	AGCGCT	1 cut(s)	343
AflIII	ACRYGT	1 cut(s)	651
AgeI	ACCGGT	1 cut(s)	887
AgsI	TTSAA	4 cut(s)	638, 881, 988, 1065
AhdI	GACNNNNNGTC	2 cut(s)	298, 891
AhlI	ACTAGT	1 cut(s)	1108
AjiI	CACGTC	1 cut(s)	622
AjnI	CCWGG	2 cut(s)	528, 645
AjuI	GAANNNNNNNTTGG	2 cut(s)	469, 501
AleI	CACNNNNGTG	1 cut(s)	239
AloI	GAACNNNNNNTCC	2 cut(s)	1247, 1279
AluBI	AGCT	4 cut(s)	21, 26, 1295, 1380
AluI	AGCT	4 cut(s)	21, 26, 1295, 1380
Alw21I	GWGCWC	1 cut(s)	23
Alw26I	GTCTC	6 cut(s)	138, 475, 878, 959, 1099, 1485
AlwI	GGATC	5 cut(s)	754, 767, 836, 1080, 1093
AlwNI	CAGNNNCTG	2 cut(s)	13, 1526
Ama87I	CYCGRG	3 cut(s)	438, 1211, 1242
Aor51HI	AGCGCT	1 cut(s)	343
ApaI	GGGCCC	2 cut(s)	809, 1274
ApeKI	GCWGC	4 cut(s)	231, 339, 629, 852
ApoI	RAATTY	1 cut(s)	568
ArsI	GACNNNNNNTTYG	2 cut(s)	1139, 1171
AsiGI	ACCGGT	1 cut(s)	887
Asp700I	GAANNNNTTC	1 cut(s)	189
AspLEI	GCGC	5 cut(s)	344, 406, 416, 548, 1352
AsuC2I	CCSGG	4 cut(s)	550, 725, 796, 1285
AsuHPI	GGTGA	5 cut(s)	253, 454, 932, 1024, 1506
AvaI	CYCGRG	3 cut(s)	438, 1211, 1242
AvaII	GGWCC	2 cut(s)	169, 727
BaeGI	GKGCMC	3 cut(s)	678, 809, 1274
BalI	TGGCCA	1 cut(s)	1451
BamHI	GGATCC	2 cut(s)	759, 1085
BanI	GGYRCC	1 cut(s)	545
BanII	GRGCYC	6 cut(s)	23, 201, 809, 1243, 1249, 1274
BbsI	GAAGAC	2 cut(s)	192, 225
Bbv12I	GWGCWC	1 cut(s)	23
BbvI	GCAGC	4 cut(s)	243, 351, 616, 864
BccI	CCATC	8 cut(s)	38, 180, 208, 329, 382, 387, 615, 1421
BceAI	ACGGC	5 cut(s)	244, 364, 616, 692, 849
BciT130I	CCWGG	2 cut(s)	530, 647
BciVI	GTATCC	1 cut(s)	802
BclI	TGATCA	1 cut(s)	1014
BcnI	CCSGG	4 cut(s)	550, 725, 796, 1285
BcoDI	GTCTC	6 cut(s)	138, 475, 878, 959, 1099, 1485
BcuI	ACTAGT	1 cut(s)	1108
BfaI	CTAG	4 cut(s)	272, 539, 1109, 1250
BfoI	RGCGCY	3 cut(s)	345, 407, 549
BfuI	GTATCC	1 cut(s)	802
BisI	GCNGC	8 cut(s)	232, 340, 393, 396, 507, 630, 853, 1136
BlpI	GCTNAGC	1 cut(s)	22
BlsI	GCNGC	8 cut(s)	233, 341, 394, 397, 508, 631, 854, 1137
Bme1390I	CCNGG	6 cut(s)	530, 550, 647, 725, 796, 1285
Bme18I	GGWCC	2 cut(s)	169, 727
BmeRI	GACNNNNNGTC	2 cut(s)	298, 891
BmeT110I	CYCGRG	3 cut(s)	438, 1211, 1242
BmgBI	CACGTC	1 cut(s)	622
BmiI	GGNNCC	9 cut(s)	76, 162, 547, 586, 728, 761, 807, 1087, 1272
BmrFI	CCNGG	6 cut(s)	530, 550, 647, 725, 796, 1285
BmrI	ACTGGG	1 cut(s)	157
BmsI	GCATC	5 cut(s)	142, 277, 293, 768, 779
BmuI	ACTGGG	1 cut(s)	157
BpiI	GAAGAC	2 cut(s)	192, 225
BplI	GAGNNNNNCTC	2 cut(s)	455, 487
BpmI	CTGGAG	3 cut(s)	61, 512, 629
Bpu1102I	GCTNAGC	1 cut(s)	22
BpuEI	CTTGAG	2 cut(s)	443, 1041
BpuMI	CCSGG	4 cut(s)	550, 725, 796, 1285
BsaHI	GRCGYC	1 cut(s)	546
BsaI	GGTCTC	3 cut(s)	138, 475, 878
BsaJI	CCNNGG	7 cut(s)	237, 519, 529, 549, 708, 786, 1008
BsaWI	WCCGGW	2 cut(s)	136, 887
BsaXI	ACNNNNNCTCC	4 cut(s)	1143, 1173, 1247, 1277
Bse118I	RCCGGY	3 cut(s)	410, 887, 1217
Bse1I	ACTGG	4 cut(s)	7, 125, 134, 152
BseBI	CCWGG	2 cut(s)	530, 647
BseDI	CCNNGG	7 cut(s)	237, 519, 529, 549, 708, 786, 1008
BseGI	GGATG	3 cut(s)	157, 607, 1515
BseMII	CTCAG	3 cut(s)	36, 1509, 1533
BseNI	ACTGG	4 cut(s)	7, 125, 134, 152
BseRI	GAGGAG	1 cut(s)	1457
BseSI	GKGCMC	3 cut(s)	678, 809, 1274
BseXI	GCAGC	4 cut(s)	243, 351, 616, 864
Bsh1236I	CGCG	1 cut(s)	594
Bsh1285I	CGRYCG	4 cut(s)	866, 870, 892, 977
BshNI	GGYRCC	1 cut(s)	545
BshTI	ACCGGT	1 cut(s)	887
BsiEI	CGRYCG	4 cut(s)	866, 870, 892, 977
BsiHKAI	GWGCWC	1 cut(s)	23
BsiHKCI	CYCGRG	3 cut(s)	438, 1211, 1242
BsiSI	CCGG	9 cut(s)	72, 137, 411, 549, 724, 796, 888, 1218, 1284
BslFI	GGGAC	2 cut(s)	886, 1160
BsmAI	GTCTC	6 cut(s)	138, 475, 878, 959, 1099, 1485
BsmBI	CGTCTC	1 cut(s)	959
BsmFI	GGGAC	2 cut(s)	886, 1160
Bso31I	GGTCTC	3 cut(s)	138, 475, 878
BsoBI	CYCGRG	3 cut(s)	438, 1211, 1242
Bsp120I	GGGCCC	2 cut(s)	805, 1270
Bsp1286I	GDGCHC	7 cut(s)	23, 201, 678, 809, 1243, 1249, 1274
Bsp143I	GATC	8 cut(s)	58, 595, 624, 759, 828, 867, 1014, 1085
Bsp1720I	GCTNAGC	1 cut(s)	22
BspCNI	CTCAG	3 cut(s)	35, 1508, 1532
BspFNI	CGCG	1 cut(s)	594
BspLI	GGNNCC	9 cut(s)	76, 162, 547, 586, 728, 761, 807, 1087, 1272
BspPI	GGATC	5 cut(s)	754, 767, 836, 1080, 1093
BspT107I	GGYRCC	1 cut(s)	545
BspTNI	GGTCTC	3 cut(s)	138, 475, 878
BsrFI	RCCGGY	3 cut(s)	410, 887, 1217
BsrI	ACTGG	4 cut(s)	7, 125, 134, 152
BssAI	RCCGGY	3 cut(s)	410, 887, 1217
BssECI	CCNNGG	7 cut(s)	237, 519, 529, 549, 708, 786, 1008
BssMI	GATC	8 cut(s)	58, 595, 624, 759, 828, 867, 1014, 1085
BssNAI	GTATAC	1 cut(s)	1201
BssNI	GRCGYC	1 cut(s)	546
BssT1I	CCWWGG	2 cut(s)	786, 1008
Bst1107I	GTATAC	1 cut(s)	1201
Bst2UI	CCWGG	2 cut(s)	530, 647
Bst4CI	ACNGT	6 cut(s)	106, 485, 877, 978, 1052, 1307
BstACI	GRCGYC	1 cut(s)	546
BstC8I	GCNNGC	4 cut(s)	783, 1140, 1165, 1219
BstDEI	CTNAG	4 cut(s)	22, 824, 1495, 1519
BstDSI	CCRYGG	1 cut(s)	708
BstENI	CCTNNNNNAGG	1 cut(s)	841
BstF5I	GGATG	3 cut(s)	157, 607, 1515
BstFNI	CGCG	1 cut(s)	594
BstH2I	RGCGCY	3 cut(s)	345, 407, 549
BstHHI	GCGC	5 cut(s)	344, 406, 416, 548, 1352
BstKTI	GATC	8 cut(s)	61, 598, 627, 762, 831, 870, 1017, 1088
BstMAI	GTCTC	6 cut(s)	138, 475, 878, 959, 1099, 1485
BstMBI	GATC	8 cut(s)	58, 595, 624, 759, 828, 867, 1014, 1085
BstMCI	CGRYCG	4 cut(s)	866, 870, 892, 977
BstMWI	GCNNNNNNNGC	4 cut(s)	348, 401, 600, 692
BstNI	CCWGG	2 cut(s)	530, 647
BstNSI	RCATGY	1 cut(s)	655
BstSCI	CCNGG	6 cut(s)	528, 548, 645, 723, 794, 1283
BstSLI	GKGCMC	3 cut(s)	678, 809, 1274
BstUI	CGCG	1 cut(s)	594
BstV1I	GCAGC	4 cut(s)	243, 351, 616, 864
BstV2I	GAAGAC	2 cut(s)	192, 225
BstX2I	RGATCY	2 cut(s)	759, 1085
BstYI	RGATCY	2 cut(s)	759, 1085
BstZ17I	GTATAC	1 cut(s)	1201
BsuI	GTATCC	1 cut(s)	802
BtgI	CCRYGG	1 cut(s)	708
BtrI	CACGTC	1 cut(s)	622
BtsCI	GGATG	3 cut(s)	157, 607, 1515
BtsI	GCAGTG	1 cut(s)	918
BtsIMutI	CAGTG	1 cut(s)	918
Cac8I	GCNNGC	4 cut(s)	783, 1140, 1165, 1219
CaiI	CAGNNNCTG	2 cut(s)	13, 1526
CfoI	GCGC	5 cut(s)	344, 406, 416, 548, 1352
Cfr10I	RCCGGY	3 cut(s)	410, 887, 1217
Csp6I	GTAC	1 cut(s)	124
CspAI	ACCGGT	1 cut(s)	887
CviAII	CATG	7 cut(s)	50, 194, 493, 560, 652, 751, 1171
CviQI	GTAC	1 cut(s)	124
DdeI	CTNAG	4 cut(s)	22, 824, 1495, 1519
DinI	GGCGCC	1 cut(s)	547
DpnI	GATC	8 cut(s)	60, 597, 626, 761, 830, 869, 1016, 1087
DpnII	GATC	8 cut(s)	58, 595, 624, 759, 828, 867, 1014, 1085
DraIII	CACNNNGTG	1 cut(s)	736
DriI	GACNNNNNGTC	2 cut(s)	298, 891
EaeI	YGGCCR	3 cut(s)	601, 1136, 1449
Eam1105I	GACNNNNNGTC	2 cut(s)	298, 891
EciI	GGCGGA	2 cut(s)	413, 1454
Ecl136II	GAGCTC	1 cut(s)	21
Eco130I	CCWWGG	2 cut(s)	786, 1008
Eco147I	AGGCCT	2 cut(s)	785, 1007
Eco24I	GRGCYC	6 cut(s)	23, 201, 809, 1243, 1249, 1274
Eco31I	GGTCTC	3 cut(s)	138, 475, 878
Eco47I	GGWCC	2 cut(s)	169, 727
Eco47III	AGCGCT	1 cut(s)	343
Eco53kI	GAGCTC	1 cut(s)	21
Eco88I	CYCGRG	3 cut(s)	438, 1211, 1242
EcoICRI	GAGCTC	1 cut(s)	21
EcoNI	CCTNNNNNAGG	1 cut(s)	841
EcoO109I	RGGNCCY	4 cut(s)	523, 585, 805, 1271
EcoRII	CCWGG	2 cut(s)	528, 645
EcoT14I	CCWWGG	2 cut(s)	786, 1008
EcoT38I	GRGCYC	6 cut(s)	23, 201, 809, 1243, 1249, 1274
EgeI	GGCGCC	1 cut(s)	547
EheI	GGCGCC	1 cut(s)	547
ErhI	CCWWGG	2 cut(s)	786, 1008
Esp3I	CGTCTC	1 cut(s)	959
FaeI	CATG	7 cut(s)	53, 197, 496, 563, 655, 754, 1174
FalI	AAGNNNNNCTT	2 cut(s)	1389, 1421
FaqI	GGGAC	2 cut(s)	886, 1160
FatI	CATG	7 cut(s)	49, 193, 492, 559, 651, 750, 1170
FauI	CCCGC	2 cut(s)	848, 1172
FbaI	TGATCA	1 cut(s)	1014
FblI	GTMKAC	1 cut(s)	1200
Fnu4HI	GCNGC	8 cut(s)	232, 340, 393, 396, 507, 630, 853, 1136
FokI	GGATG	3 cut(s)	164, 594, 1522
FriOI	GRGCYC	6 cut(s)	23, 201, 809, 1243, 1249, 1274
Fsp4HI	GCNGC	8 cut(s)	232, 340, 393, 396, 507, 630, 853, 1136
FspBI	CTAG	4 cut(s)	272, 539, 1109, 1250
GlaI	GCGC	5 cut(s)	343, 405, 415, 547, 1351
GluI	GCNGC	8 cut(s)	232, 340, 393, 396, 507, 630, 853, 1136
GsuI	CTGGAG	3 cut(s)	61, 512, 629
HaeII	RGCGCY	3 cut(s)	345, 407, 549
HapII	CCGG	9 cut(s)	72, 137, 411, 549, 724, 796, 888, 1218, 1284
HhaI	GCGC	5 cut(s)	344, 406, 416, 548, 1352
Hin1I	GRCGYC	1 cut(s)	546
Hin1II	CATG	7 cut(s)	53, 197, 496, 563, 655, 754, 1174
Hin6I	GCGC	5 cut(s)	342, 404, 414, 546, 1350
HinP1I	GCGC	5 cut(s)	342, 404, 414, 546, 1350
HincII	GTYRAC	1 cut(s)	324
HindII	GTYRAC	1 cut(s)	324
HindIII	AAGCTT	1 cut(s)	1378
HinfI	GANTC	7 cut(s)	206, 356, 688, 956, 1061, 1175, 1205
HpaI	GTTAAC	1 cut(s)	324
HpaII	CCGG	9 cut(s)	72, 137, 411, 549, 724, 796, 888, 1218, 1284
HphI	GGTGA	5 cut(s)	253, 454, 932, 1024, 1506
Hpy166II	GTNNAC	5 cut(s)	145, 244, 324, 730, 1201
Hpy188I	TCNGA	4 cut(s)	612, 961, 1104, 1522
Hpy188III	TCNNGA	7 cut(s)	62, 158, 272, 871, 881, 1058, 1083
Hpy8I	GTNNAC	5 cut(s)	145, 244, 324, 730, 1201
Hpy99I	CGWCG	6 cut(s)	169, 256, 304, 307, 623, 897
HpyAV	CCTTC	4 cut(s)	355, 536, 749, 793
HpyCH4III	ACNGT	6 cut(s)	106, 485, 877, 978, 1052, 1307
HpyCH4IV	ACGT	5 cut(s)	299, 320, 621, 732, 968
HpyCH4V	TGCA	4 cut(s)	559, 781, 911, 1231
HpyF10VI	GCNNNNNNNGC	4 cut(s)	348, 401, 600, 692
HpyF3I	CTNAG	4 cut(s)	22, 824, 1495, 1519
HpySE526I	ACGT	5 cut(s)	299, 320, 621, 732, 968
Hsp92I	GRCGYC	1 cut(s)	546
Hsp92II	CATG	7 cut(s)	53, 197, 496, 563, 655, 754, 1174
HspAI	GCGC	5 cut(s)	342, 404, 414, 546, 1350
KasI	GGCGCC	1 cut(s)	545
KroI	GCCGGC	1 cut(s)	1217
KroNI	GCCGGC	1 cut(s)	1219
Ksp22I	TGATCA	1 cut(s)	1014
KspAI	GTTAAC	1 cut(s)	324
Kzo9I	GATC	8 cut(s)	58, 595, 624, 759, 828, 867, 1014, 1085
LmnI	GCTCC	2 cut(s)	80, 648
Lsp1109I	GCAGC	4 cut(s)	243, 351, 616, 864
LweI	GCATC	5 cut(s)	142, 277, 293, 768, 779
MaeI	CTAG	4 cut(s)	272, 539, 1109, 1250
MaeII	ACGT	5 cut(s)	299, 320, 621, 732, 968
MaeIII	GTNAC	2 cut(s)	1111, 1512
MalI	GATC	8 cut(s)	60, 597, 626, 761, 830, 869, 1016, 1087
MboI	GATC	8 cut(s)	58, 595, 624, 759, 828, 867, 1014, 1085
MboII	GAAGA	4 cut(s)	197, 230, 344, 1139
MfeI	CAATTG	2 cut(s)	1018, 1065
MflI	RGATCY	2 cut(s)	759, 1085
MhlI	GDGCHC	7 cut(s)	23, 201, 678, 809, 1243, 1249, 1274
MlsI	TGGCCA	1 cut(s)	1451
MluCI	AATT	7 cut(s)	275, 568, 989, 1018, 1045, 1065, 1537
MluNI	TGGCCA	1 cut(s)	1451
Mly113I	GGCGCC	1 cut(s)	546
MlyI	GAGTC	3 cut(s)	215, 350, 1199
MmeI	TCCRAC	3 cut(s)	500, 635, 1454
Mox20I	TGGCCA	1 cut(s)	1451
MroNI	GCCGGC	1 cut(s)	1217
MroXI	GAANNNNTTC	1 cut(s)	189
MscI	TGGCCA	1 cut(s)	1451
MseI	TTAA	7 cut(s)	323, 666, 996, 1044, 1098, 1362, 1422
MslI	CAYNNNNRTG	2 cut(s)	239, 1508
Msp20I	TGGCCA	1 cut(s)	1451
MspA1I	CMGCKG	1 cut(s)	855
MspI	CCGG	9 cut(s)	72, 137, 411, 549, 724, 796, 888, 1218, 1284
MspR9I	CCNGG	6 cut(s)	530, 550, 647, 725, 796, 1285
MunI	CAATTG	2 cut(s)	1018, 1065
MvaI	CCWGG	2 cut(s)	530, 647
MvnI	CGCG	1 cut(s)	594
MwoI	GCNNNNNNNGC	4 cut(s)	348, 401, 600, 692
NaeI	GCCGGC	1 cut(s)	1219
NarI	GGCGCC	1 cut(s)	546
NciI	CCSGG	4 cut(s)	550, 725, 796, 1285
NdeII	GATC	8 cut(s)	58, 595, 624, 759, 828, 867, 1014, 1085
NgoMIV	GCCGGC	1 cut(s)	1217
NlaIII	CATG	7 cut(s)	53, 197, 496, 563, 655, 754, 1174
NlaIV	GGNNCC	9 cut(s)	76, 162, 547, 586, 728, 761, 807, 1087, 1272
NmeAIII	GCCGAG	2 cut(s)	452, 1172
NmuCI	GTSAC	2 cut(s)	1111, 1512
NspI	RCATGY	1 cut(s)	655
OliI	CACNNNNGTG	1 cut(s)	239
PaeR7I	CTCGAG	1 cut(s)	1211
PceI	AGGCCT	2 cut(s)	785, 1007
PciI	ACATGT	1 cut(s)	651
PcsI	WCGNNNNNNNCGW	5 cut(s)	234, 839, 974, 1209, 1303
PdiI	GCCGGC	1 cut(s)	1219
PdmI	GAANNNNTTC	1 cut(s)	189
PfeI	GAWTC	4 cut(s)	688, 956, 1061, 1175
PflMI	CCANNNNNTGG	1 cut(s)	736
PfoI	TCCNGGA	2 cut(s)	645, 794
PinAI	ACCGGT	1 cut(s)	887
PkrI	GCNGC	8 cut(s)	233, 341, 394, 397, 508, 631, 854, 1137
Ple19I	CGATCG	1 cut(s)	870
PleI	GAGTC	3 cut(s)	214, 350, 1199
PluTI	GGCGCC	1 cut(s)	549
PpsI	GAGTC	3 cut(s)	214, 350, 1199
PscI	ACATGT	1 cut(s)	651
Psp124BI	GAGCTC	1 cut(s)	23
Psp6I	CCWGG	2 cut(s)	528, 645
PspGI	CCWGG	2 cut(s)	528, 645
PspN4I	GGNNCC	9 cut(s)	76, 162, 547, 586, 728, 761, 807, 1087, 1272
PspOMI	GGGCCC	2 cut(s)	805, 1270
PspXI	VCTCGAGB	1 cut(s)	1211
PstNI	CAGNNNCTG	2 cut(s)	13, 1526
PsuI	RGATCY	2 cut(s)	759, 1085
PvuI	CGATCG	1 cut(s)	870
RsaI	GTAC	1 cut(s)	125
RsaNI	GTAC	1 cut(s)	124
RseI	CAYNNNNRTG	2 cut(s)	239, 1508
SacI	GAGCTC	1 cut(s)	23
SaqAI	TTAA	7 cut(s)	323, 666, 996, 1044, 1098, 1362, 1422
SatI	GCNGC	8 cut(s)	232, 340, 393, 396, 507, 630, 853, 1136
Sau3AI	GATC	8 cut(s)	58, 595, 624, 759, 828, 867, 1014, 1085
SchI	GAGTC	3 cut(s)	215, 350, 1199
ScrFI	CCNGG	6 cut(s)	530, 550, 647, 725, 796, 1285
SduI	GDGCHC	7 cut(s)	23, 201, 678, 809, 1243, 1249, 1274
SfaNI	GCATC	5 cut(s)	142, 277, 293, 768, 779
SfoI	GGCGCC	1 cut(s)	547
Sfr274I	CTCGAG	1 cut(s)	1211
SinI	GGWCC	2 cut(s)	169, 727
SlaI	CTCGAG	1 cut(s)	1211
SmiMI	CAYNNNNRTG	2 cut(s)	239, 1508
SmlI	CTYRAG	3 cut(s)	458, 1056, 1211
SmoI	CTYRAG	3 cut(s)	458, 1056, 1211
SpeI	ACTAGT	1 cut(s)	1108
Sse9I	AATT	7 cut(s)	275, 568, 989, 1018, 1045, 1065, 1537
SseBI	AGGCCT	2 cut(s)	785, 1007
SspDI	GGCGCC	1 cut(s)	545
SspMI	CTAG	4 cut(s)	272, 539, 1109, 1250
SstI	GAGCTC	1 cut(s)	23
StuI	AGGCCT	2 cut(s)	785, 1007
StyD4I	CCNGG	6 cut(s)	528, 548, 645, 723, 794, 1283
StyI	CCWWGG	2 cut(s)	786, 1008
TaaI	ACNGT	6 cut(s)	106, 485, 877, 978, 1052, 1307
TaiI	ACGT	5 cut(s)	302, 323, 624, 735, 971
TasI	AATT	7 cut(s)	275, 568, 989, 1018, 1045, 1065, 1537
TauI	GCSGC	4 cut(s)	395, 398, 509, 1138
TfiI	GAWTC	4 cut(s)	688, 956, 1061, 1175
Tru1I	TTAA	7 cut(s)	323, 666, 996, 1044, 1098, 1362, 1422
Tru9I	TTAA	7 cut(s)	323, 666, 996, 1044, 1098, 1362, 1422
TscAI	CASTG	1 cut(s)	918
TseFI	GTSAC	2 cut(s)	1111, 1512
TseI	GCWGC	4 cut(s)	231, 339, 629, 852
Tsp45I	GTSAC	2 cut(s)	1111, 1512
TspDTI	ATGAA	3 cut(s)	182, 1159, 1167
TspGWI	ACGGA	3 cut(s)	182, 341, 1164
TspRI	CASTG	1 cut(s)	918
Van91I	CCANNNNNTGG	1 cut(s)	736
VpaK11BI	GGWCC	2 cut(s)	169, 727
XagI	CCTNNNNNAGG	1 cut(s)	841
XapI	RAATTY	1 cut(s)	568
XbaI	TCTAGA	1 cut(s)	271
XceI	RCATGY	1 cut(s)	655
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1459
XhoI	CTCGAG	1 cut(s)	1211
XmiI	GTMKAC	1 cut(s)	1200
XmnI	GAANNNNTTC	1 cut(s)	189
XspI	CTAG	4 cut(s)	272, 539, 1109, 1250

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.