Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr6B

Orthogroup ID

OG0015200

Physical Location & Seq

Genomic Coordinates Forward (+)

60120343 .. 60122051

Gene Structure 1709 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh6BG372000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1509 bp

ATGGAGCTCGAGCTCGAGCTCGACCTCTCCGGCTGCAGCACTGAAACCACAAGCACGACCAACACGGCCATTTCCCCTGACCAGTGGTACGATTGGTCTCCGGTCGTCGACTGGGAGTCTCTCGCTCCGATTGACCAGCTCGCCGGTGGTGGAGACTTCCACGAGCTGTTCGAGTCGATGATGGAGGGCCAAGACGGCGGAGATATGGACTCGCCGTCCTCCGAGACGGTTGAGGAAGTGTCAAACTCGTGTTACACCACGACGTCGTCGCAGTCGACGGACGTGACGATGCTGGAGGAAGGAGCGGCATCGAACGGCGAGGATTCGAAGGGGCTGAGATTGGTGCATCTGTTGATGGCGGCGGCGGAGGCGCTGACCGGCGCCAACAAGAGCAGAGATCTGGCTCGGGTGATATTGGTTCGGCTCAAGGAGTTGGTCTCCCCAACTGACGGTACTAACATGGAGAGGCTGGCGGCGTATTTTACCGAGGCGCTTCAGGGTTTGCTAGAAGGCGCCGGGGGTGTCAGCCACTCCAAGCATTTGTTCGGAAATGGGTCCCACCGCGACCACGGCCACCACCCGACGGACGTCATCGCGGCGTTTCAGCTACTTCAGGACATGTCGCCCTATGTCAAGTTTGGGCACTTCACGGCCAATCAGGCCATTTTGGAGACTGTGGCCCATGACAGGAGGGTCCACATAGTGGACTATGACATCATGGAGGGAATCCAATGGGCCTCCTTGATGCAGGCCCTGGTGTCCAGGAAGGATGGCCCACCGACCCCACATCTTAGGATCACTGCTTTGTCGCGAGGCGGGAGCAGCCGGAGGTCGATAGGGACCGTCCAAGAGACCGGTCGTCGTCTCACGGCGTTTGCCACGTCCATTGGTCAGCCGTTTTCGTTTCATCAATGTAGGTTGGATTCGGACGAGACATTTCGACCGTCGGCTCTAAAGTTGGTTAAGGGCGAGGCCTTGGTAATAAACTGCATGCTGAACCTTCCACACTTTAGCTATCGATCCCCGGATTCTATTGCTTCCTTTTTATCCGGAGCCAAGACCCTAAACCCGAGACTGGTAACTTTGGTTGAAGAAGAGGTTAGGCCTGCCGGAGACGGTGGCTTTGTGGCCCGCTTCATGGACTCACTGTATCACTACTCGGCTGTCTACGACTCGCTCGAGGCCGGCTTCCCAATGCAGAGCCGGGCTCGAGAATTAGTGGAGAGAGTGTTCTTGGGACCCCGAATAGCTGGGTCGTTGGCTCGTATCTATCGGGCTCACGGAGAGGTAGGTTGCTCTTGGTGGGAGTGGTTAGGTGCGGTAGGGTTTAAGCCAATGCCAATAAGCTTTGCCAATCATTGTCAGGCAAAGCTTTTGTTGGGTCTTTTTAATGATGGTTATAGGGTGGAGGAGGTGGCAAATCATAGGTTGGTTTTAGGTTGGAAATCACGGTCTTTACTATCAGCTTCTATTTGGACTTCACCCCCAGAATCTGATTTTGCTGATTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005635 GO:0005737 GO:0005783 GO:0006355 GO:0008150 GO:0009889 GO:0010468 GO:0010556 GO:0012505 GO:0016020 GO:0019219 GO:0019222 GO:0031090 GO:0031323 GO:0031326 GO:0031965 GO:0031967 GO:0031975 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043565 GO:0044422 GO:0044424 GO:0044428 GO:0044444 GO:0044446 GO:0044464 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0060255 GO:0065007 GO:0080090 GO:0097159 GO:0140110 GO:1901363 GO:1903506 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

GRAS

Protein Analysis

502

Amino Acids

55.06

Weight (kDa)

5.24

Isoelectric Point (pI)

41.75

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
GRAS	PF03514	114 - 493	3.7e-104	GRAS domain family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0015200)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G08250
fragaria_vesca	FvH4_2g26540
malus_domestica	MD08G1167600.v1.1 MD15G1353200.v1.1
prunus_persica	Prupe.1G501500_v2.0.a1
rosa_chinensis	RchiOBHm_Chr6g0295411
rosa_laevigata	RLG00000011806
rosa_multiflora	Rmu_co8465007.1_g000001 Rmu_sc0003058.1_g000004
rosa_roxburghii	Rroxscaffold_7G00172520
rosa_rugosa	Rorug06G0250400
rosa_samantha	Rh6AG363800 Rh6BG372000 Rh6CG378400 Rh6DG364800
rosa_wichuraiana	Rw6G031760

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	692
AatII	GACGTC	2 cut(s)	266, 591
AccB1I	GGYRCC	2 cut(s)	380, 512
AccB7I	CCANNNNNTGG	1 cut(s)	703
AccBSI	CCGCTC	1 cut(s)	305
AccI	GTMKAC	3 cut(s)	108, 275, 1167
AccII	CGCG	3 cut(s)	564, 596, 811
AccIII	TCCGGA	1 cut(s)	1049
AclWI	GGATC	2 cut(s)	803, 1014
AcoI	YGGCCR	3 cut(s)	66, 571, 651
AcuI	CTGAAG	2 cut(s)	479, 596
AcyI	GRCGYC	4 cut(s)	263, 381, 513, 588
AdeI	CACNNNGTG	1 cut(s)	703
AfaI	GTAC	2 cut(s)	89, 454
AfiI	CCNNNNNNNGG	6 cut(s)	449, 583, 687, 703, 1075, 1138
AflIII	ACRYGT	1 cut(s)	618
AgeI	ACCGGT	1 cut(s)	854
AgsI	TTSAA	1 cut(s)	1091
AhdI	GACNNNNNGTC	3 cut(s)	115, 214, 858
AjiI	CACGTC	2 cut(s)	283, 882
AjnI	CCWGG	2 cut(s)	753, 761
AjuI	GAANNNNNNNTTGG	2 cut(s)	527, 559
AloI	GAACNNNNNNTCC	2 cut(s)	1214, 1246
Alw21I	GWGCWC	3 cut(s)	9, 15, 21
AlwI	GGATC	2 cut(s)	803, 1014
AlwNI	CAGNNNCTG	2 cut(s)	754, 1493
Ama87I	CYCGRG	6 cut(s)	8, 14, 405, 1069, 1178, 1209
Aor13HI	TCCGGA	1 cut(s)	1049
ApeKI	GCWGC	3 cut(s)	33, 36, 822
ArsI	GACNNNNNNTTYG	2 cut(s)	1106, 1138
AsiGI	ACCGGT	1 cut(s)	854
AspLEI	GCGC	4 cut(s)	373, 383, 493, 515
AsuC2I	CCSGG	3 cut(s)	517, 1025, 1205
AsuHPI	GGTGA	2 cut(s)	421, 1473
AsuII	TTCGAA	1 cut(s)	326
AvaI	CYCGRG	6 cut(s)	8, 14, 405, 1069, 1178, 1209
AvaII	GGWCC	4 cut(s)	555, 694, 840, 1238
BaeGI	GKGCMC	1 cut(s)	645
BanI	GGYRCC	2 cut(s)	380, 512
BanII	GRGCYC	5 cut(s)	9, 15, 21, 1210, 1279
BauI	CACGAG	2 cut(s)	161, 247
Bbv12I	GWGCWC	3 cut(s)	9, 15, 21
BbvI	GCAGC	3 cut(s)	20, 48, 834
BccI	CCATC	4 cut(s)	175, 349, 764, 1388
BceAI	ACGGC	8 cut(s)	81, 199, 211, 331, 586, 666, 880, 885
BciT130I	CCWGG	2 cut(s)	755, 763
BcnI	CCSGG	3 cut(s)	517, 1025, 1205
BfaI	CTAG	1 cut(s)	506
BfmI	CTRYAG	1 cut(s)	34
BfoI	RGCGCY	4 cut(s)	374, 384, 494, 516
BglI	GCCNNNNNGGC	2 cut(s)	195, 659
BglII	AGATCT	1 cut(s)	397
BisI	GCNGC	8 cut(s)	34, 37, 306, 360, 363, 474, 597, 823
BlsI	GCNGC	8 cut(s)	35, 38, 307, 361, 364, 475, 598, 824
Bme1390I	CCNGG	5 cut(s)	517, 755, 763, 1025, 1205
Bme18I	GGWCC	4 cut(s)	555, 694, 840, 1238
BmeRI	GACNNNNNGTC	3 cut(s)	115, 214, 858
BmeT110I	CYCGRG	6 cut(s)	8, 14, 405, 1069, 1178, 1209
BmgBI	CACGTC	2 cut(s)	283, 882
BmiI	GGNNCC	9 cut(s)	382, 514, 556, 557, 695, 841, 1054, 1239, 1240
BmrFI	CCNGG	5 cut(s)	517, 755, 763, 1025, 1205
BmrI	ACTGGG	1 cut(s)	121
BmsI	GCATC	4 cut(s)	279, 317, 355, 735
BmuI	ACTGGG	1 cut(s)	121
BoxI	GACNNNNGTC	1 cut(s)	587
BplI	GAGNNNNNCTC	4 cut(s)	422, 454, 1192, 1224
BpmI	CTGGAG	1 cut(s)	314
Bpu14I	TTCGAA	1 cut(s)	326
BpuEI	CTTGAG	1 cut(s)	410
BpuMI	CCSGG	3 cut(s)	517, 1025, 1205
Bsa29I	ATCGAT	1 cut(s)	1018
BsaHI	GRCGYC	4 cut(s)	263, 381, 513, 588
BsaI	GGTCTC	3 cut(s)	102, 442, 845
BsaJI	CCNNGG	6 cut(s)	486, 516, 568, 753, 975, 1023
BsaWI	WCCGGW	3 cut(s)	100, 854, 1049
BsaXI	ACNNNNNCTCC	2 cut(s)	1214, 1244
Bsc4I	CCNNNNNNNGG	6 cut(s)	449, 583, 687, 703, 1075, 1138
Bse118I	RCCGGY	4 cut(s)	143, 377, 854, 1184
Bse1I	ACTGG	3 cut(s)	82, 116, 1080
BseAI	TCCGGA	1 cut(s)	1049
BseBI	CCWGG	2 cut(s)	755, 763
BseCI	ATCGAT	1 cut(s)	1018
BseDI	CCNNGG	6 cut(s)	486, 516, 568, 753, 975, 1023
BseGI	GGATG	1 cut(s)	775
BseLI	CCNNNNNNNGG	6 cut(s)	449, 583, 687, 703, 1075, 1138
BseMII	CTCAG	1 cut(s)	326
BseNI	ACTGG	3 cut(s)	82, 116, 1080
BseRI	GAGGAG	1 cut(s)	1424
BseSI	GKGCMC	1 cut(s)	645
BseXI	GCAGC	3 cut(s)	20, 48, 834
BseYI	CCCAGC	1 cut(s)	1250
Bsh1236I	CGCG	3 cut(s)	564, 596, 811
Bsh1285I	CGRYCG	3 cut(s)	105, 859, 944
BshNI	GGYRCC	2 cut(s)	380, 512
BshTI	ACCGGT	1 cut(s)	854
BshVI	ATCGAT	1 cut(s)	1018
BsiEI	CGRYCG	3 cut(s)	105, 859, 944
BsiHKAI	GWGCWC	3 cut(s)	9, 15, 21
BsiHKCI	CYCGRG	6 cut(s)	8, 14, 405, 1069, 1178, 1209
BslFI	GGGAC	3 cut(s)	541, 853, 1251
BslI	CCNNNNNNNGG	6 cut(s)	449, 583, 687, 703, 1075, 1138
BsmBI	CGTCTC	3 cut(s)	218, 869, 1107
BsmFI	GGGAC	3 cut(s)	541, 853, 1251
Bso31I	GGTCTC	3 cut(s)	102, 442, 845
BsoBI	CYCGRG	6 cut(s)	8, 14, 405, 1069, 1178, 1209
Bsp119I	TTCGAA	1 cut(s)	326
Bsp1286I	GDGCHC	6 cut(s)	9, 15, 21, 645, 1210, 1279
Bsp13I	TCCGGA	1 cut(s)	1049
Bsp143I	GATC	3 cut(s)	397, 795, 1019
Bsp68I	TCGCGA	1 cut(s)	811
BspCNI	CTCAG	1 cut(s)	327
BspDI	ATCGAT	1 cut(s)	1018
BspEI	TCCGGA	1 cut(s)	1049
BspFNI	CGCG	3 cut(s)	564, 596, 811
BspLI	GGNNCC	9 cut(s)	382, 514, 556, 557, 695, 841, 1054, 1239, 1240
BspMAI	CTGCAG	1 cut(s)	38
BspPI	GGATC	2 cut(s)	803, 1014
BspT104I	TTCGAA	1 cut(s)	326
BspT107I	GGYRCC	2 cut(s)	380, 512
BspTNI	GGTCTC	3 cut(s)	102, 442, 845
BsrBI	CCGCTC	1 cut(s)	305
BsrFI	RCCGGY	4 cut(s)	143, 377, 854, 1184
BsrI	ACTGG	3 cut(s)	82, 116, 1080
BssAI	RCCGGY	4 cut(s)	143, 377, 854, 1184
BssECI	CCNNGG	6 cut(s)	486, 516, 568, 753, 975, 1023
BssMI	GATC	3 cut(s)	397, 795, 1019
BssNI	GRCGYC	4 cut(s)	263, 381, 513, 588
BssSI	CACGAG	2 cut(s)	161, 247
BssT1I	CCWWGG	1 cut(s)	975
Bst2BI	CACGAG	2 cut(s)	161, 247
Bst2UI	CCWGG	2 cut(s)	755, 763
Bst4CI	ACNGT	8 cut(s)	229, 452, 676, 844, 945, 1118, 1149, 1452
Bst6I	CTCTTC	1 cut(s)	1089
BstACI	GRCGYC	4 cut(s)	263, 381, 513, 588
BstBI	TTCGAA	1 cut(s)	326
BstC8I	GCNNGC	7 cut(s)	141, 471, 750, 992, 1107, 1132, 1186
BstDEI	CTNAG	2 cut(s)	335, 791
BstDSI	CCRYGG	1 cut(s)	568
BstF5I	GGATG	1 cut(s)	775
BstFNI	CGCG	3 cut(s)	564, 596, 811
BstH2I	RGCGCY	4 cut(s)	374, 384, 494, 516
BstHHI	GCGC	4 cut(s)	373, 383, 493, 515
BstKTI	GATC	3 cut(s)	400, 798, 1022
BstMBI	GATC	3 cut(s)	397, 795, 1019
BstMCI	CGRYCG	3 cut(s)	105, 859, 944
BstMWI	GCNNNNNNNGC	5 cut(s)	195, 368, 570, 659, 822
BstNI	CCWGG	2 cut(s)	755, 763
BstNSI	RCATGY	2 cut(s)	622, 994
BstPAI	GACNNNNGTC	1 cut(s)	587
BstSCI	CCNGG	5 cut(s)	515, 753, 761, 1023, 1203
BstSFI	CTRYAG	1 cut(s)	34
BstSLI	GKGCMC	1 cut(s)	645
BstUI	CGCG	3 cut(s)	564, 596, 811
BstV1I	GCAGC	3 cut(s)	20, 48, 834
BstX2I	RGATCY	1 cut(s)	397
BstYI	RGATCY	1 cut(s)	397
Bsu15I	ATCGAT	1 cut(s)	1018
BsuTUI	ATCGAT	1 cut(s)	1018
BtgI	CCRYGG	1 cut(s)	568
BtgZI	GCGATG	1 cut(s)	577
BtrI	CACGTC	2 cut(s)	283, 882
BtsCI	GGATG	1 cut(s)	775
BtsI	GCAGTG	1 cut(s)	798
BtsIMutI	CAGTG	4 cut(s)	39, 89, 798, 1145
BtuMI	TCGCGA	1 cut(s)	811
Cac8I	GCNNGC	7 cut(s)	141, 471, 750, 992, 1107, 1132, 1186
CaiI	CAGNNNCTG	2 cut(s)	754, 1493
CfoI	GCGC	4 cut(s)	373, 383, 493, 515
Cfr10I	RCCGGY	4 cut(s)	143, 377, 854, 1184
ClaI	ATCGAT	1 cut(s)	1018
Csp6I	GTAC	2 cut(s)	88, 453
CspAI	ACCGGT	1 cut(s)	854
CspCI	CAANNNNNGTGG	2 cut(s)	868, 903
CviAII	CATG	6 cut(s)	460, 619, 683, 718, 991, 1138
CviQI	GTAC	2 cut(s)	88, 453
DdeI	CTNAG	2 cut(s)	335, 791
DinI	GGCGCC	2 cut(s)	382, 514
DpnI	GATC	3 cut(s)	399, 797, 1021
DpnII	GATC	3 cut(s)	397, 795, 1019
DraIII	CACNNNGTG	1 cut(s)	703
DrdI	GACNNNNNNGTC	1 cut(s)	692
DriI	GACNNNNNGTC	3 cut(s)	115, 214, 858
DseDI	GACNNNNNNGTC	1 cut(s)	692
EaeI	YGGCCR	3 cut(s)	66, 571, 651
Eam1104I	CTCTTC	1 cut(s)	1089
Eam1105I	GACNNNNNGTC	3 cut(s)	115, 214, 858
EarI	CTCTTC	1 cut(s)	1089
EciI	GGCGGA	2 cut(s)	213, 380
Ecl136II	GAGCTC	3 cut(s)	7, 13, 19
Eco130I	CCWWGG	1 cut(s)	975
Eco147I	AGGCCT	2 cut(s)	974, 1105
Eco24I	GRGCYC	5 cut(s)	9, 15, 21, 1210, 1279
Eco31I	GGTCTC	3 cut(s)	102, 442, 845
Eco47I	GGWCC	4 cut(s)	555, 694, 840, 1238
Eco53kI	GAGCTC	3 cut(s)	7, 13, 19
Eco57I	CTGAAG	2 cut(s)	479, 596
Eco88I	CYCGRG	6 cut(s)	8, 14, 405, 1069, 1178, 1209
EcoICRI	GAGCTC	3 cut(s)	7, 13, 19
EcoO109I	RGGNCCY	3 cut(s)	555, 751, 1238
EcoRII	CCWGG	2 cut(s)	753, 761
EcoT14I	CCWWGG	1 cut(s)	975
EcoT38I	GRGCYC	5 cut(s)	9, 15, 21, 1210, 1279
EgeI	GGCGCC	2 cut(s)	382, 514
EheI	GGCGCC	2 cut(s)	382, 514
ErhI	CCWWGG	1 cut(s)	975
Esp3I	CGTCTC	3 cut(s)	218, 869, 1107
FaeI	CATG	6 cut(s)	463, 622, 686, 721, 994, 1141
FaqI	GGGAC	3 cut(s)	541, 853, 1251
FatI	CATG	6 cut(s)	459, 618, 682, 717, 990, 1137
FauI	CCCGC	2 cut(s)	809, 1139
FblI	GTMKAC	3 cut(s)	108, 275, 1167
Fnu4HI	GCNGC	8 cut(s)	34, 37, 306, 360, 363, 474, 597, 823
FokI	GGATG	1 cut(s)	782
FriOI	GRGCYC	5 cut(s)	9, 15, 21, 1210, 1279
Fsp4HI	GCNGC	8 cut(s)	34, 37, 306, 360, 363, 474, 597, 823
FspBI	CTAG	1 cut(s)	506
GlaI	GCGC	4 cut(s)	372, 382, 492, 514
GluI	GCNGC	8 cut(s)	34, 37, 306, 360, 363, 474, 597, 823
GsaI	CCCAGC	1 cut(s)	1254
GsuI	CTGGAG	1 cut(s)	314
HaeII	RGCGCY	4 cut(s)	374, 384, 494, 516
HhaI	GCGC	4 cut(s)	373, 383, 493, 515
Hin1I	GRCGYC	4 cut(s)	263, 381, 513, 588
Hin1II	CATG	6 cut(s)	463, 622, 686, 721, 994, 1141
Hin6I	GCGC	4 cut(s)	371, 381, 491, 513
HinP1I	GCGC	4 cut(s)	371, 381, 491, 513
HincII	GTYRAC	2 cut(s)	109, 276
HindII	GTYRAC	2 cut(s)	109, 276
HindIII	AAGCTT	2 cut(s)	1345, 1370
HphI	GGTGA	2 cut(s)	421, 1473
Hpy166II	GTNNAC	5 cut(s)	109, 276, 697, 706, 1168
Hpy188I	TCNGA	5 cut(s)	129, 223, 548, 928, 1495
Hpy188III	TCNNGA	4 cut(s)	614, 810, 1050, 1211
Hpy8I	GTNNAC	5 cut(s)	109, 276, 697, 706, 1168
Hpy99I	CGWCG	8 cut(s)	110, 265, 268, 271, 280, 586, 864, 949
HpyAV	CCTTC	5 cut(s)	293, 322, 503, 760, 1010
HpyCH4III	ACNGT	8 cut(s)	229, 452, 676, 844, 945, 1118, 1149, 1452
HpyCH4IV	ACGT	4 cut(s)	263, 282, 588, 881
HpyCH4V	TGCA	5 cut(s)	36, 346, 748, 990, 1198
HpyF10VI	GCNNNNNNNGC	5 cut(s)	195, 368, 570, 659, 822
HpyF3I	CTNAG	2 cut(s)	335, 791
HpySE526I	ACGT	4 cut(s)	263, 282, 588, 881
Hsp92I	GRCGYC	4 cut(s)	263, 381, 513, 588
Hsp92II	CATG	6 cut(s)	463, 622, 686, 721, 994, 1141
HspAI	GCGC	4 cut(s)	371, 381, 491, 513
KasI	GGCGCC	2 cut(s)	380, 512
KflI	GGGWCCC	2 cut(s)	555, 1238
Kpn2I	TCCGGA	1 cut(s)	1049
KroI	GCCGGC	1 cut(s)	1184
KroNI	GCCGGC	1 cut(s)	1186
Kzo9I	GATC	3 cut(s)	397, 795, 1019
LmnI	GCTCC	5 cut(s)	4, 130, 302, 819, 1052
Lsp1109I	GCAGC	3 cut(s)	20, 48, 834
LweI	GCATC	4 cut(s)	279, 317, 355, 735
MaeI	CTAG	1 cut(s)	506
MaeII	ACGT	4 cut(s)	263, 282, 588, 881
MaeIII	GTNAC	3 cut(s)	251, 283, 1078
MalI	GATC	3 cut(s)	399, 797, 1021
MbiI	CCGCTC	1 cut(s)	305
MboI	GATC	3 cut(s)	397, 795, 1019
MboII	GAAGA	2 cut(s)	1103, 1106
MflI	RGATCY	1 cut(s)	397
MhlI	GDGCHC	6 cut(s)	9, 15, 21, 645, 1210, 1279
MluCI	AATT	1 cut(s)	1214
Mly113I	GGCGCC	2 cut(s)	381, 513
MlyI	GAGTC	5 cut(s)	125, 182, 203, 1136, 1166
MmeI	TCCRAC	2 cut(s)	900, 1421
MroI	TCCGGA	1 cut(s)	1049
MroNI	GCCGGC	1 cut(s)	1184
MseI	TTAA	3 cut(s)	963, 1329, 1389
MspR9I	CCNGG	5 cut(s)	517, 755, 763, 1025, 1205
MvaI	CCWGG	2 cut(s)	755, 763
MvnI	CGCG	3 cut(s)	564, 596, 811
MwoI	GCNNNNNNNGC	5 cut(s)	195, 368, 570, 659, 822
NaeI	GCCGGC	1 cut(s)	1186
NarI	GGCGCC	2 cut(s)	381, 513
NciI	CCSGG	3 cut(s)	517, 1025, 1205
NdeII	GATC	3 cut(s)	397, 795, 1019
NgoMIV	GCCGGC	1 cut(s)	1184
NlaIII	CATG	6 cut(s)	463, 622, 686, 721, 994, 1141
NlaIV	GGNNCC	9 cut(s)	382, 514, 556, 557, 695, 841, 1054, 1239, 1240
NmeAIII	GCCGAG	1 cut(s)	1139
NmuCI	GTSAC	1 cut(s)	283
NruI	TCGCGA	1 cut(s)	811
NspI	RCATGY	2 cut(s)	622, 994
NspV	TTCGAA	1 cut(s)	326
PaeI	GCATGC	1 cut(s)	994
PaeR7I	CTCGAG	4 cut(s)	8, 14, 1178, 1209
PceI	AGGCCT	2 cut(s)	974, 1105
PciI	ACATGT	1 cut(s)	618
PcsI	WCGNNNNNNNCGW	4 cut(s)	168, 272, 284, 1176
PdiI	GCCGGC	1 cut(s)	1186
PfeI	GAWTC	5 cut(s)	323, 726, 923, 1028, 1490
PflFI	GACNNNGTC	1 cut(s)	265
PflMI	CCANNNNNTGG	1 cut(s)	703
PfoI	TCCNGGA	1 cut(s)	761
PinAI	ACCGGT	1 cut(s)	854
PkrI	GCNGC	8 cut(s)	35, 38, 307, 361, 364, 475, 598, 824
PleI	GAGTC	5 cut(s)	124, 181, 203, 1136, 1166
PluTI	GGCGCC	2 cut(s)	384, 516
PpsI	GAGTC	5 cut(s)	124, 181, 203, 1136, 1166
PpuMI	RGGWCCY	2 cut(s)	555, 1238
PscI	ACATGT	1 cut(s)	618
PshAI	GACNNNNGTC	1 cut(s)	587
Psp124BI	GAGCTC	3 cut(s)	9, 15, 21
Psp5II	RGGWCCY	2 cut(s)	555, 1238
Psp6I	CCWGG	2 cut(s)	753, 761
PspFI	CCCAGC	1 cut(s)	1250
PspGI	CCWGG	2 cut(s)	753, 761
PspN4I	GGNNCC	9 cut(s)	382, 514, 556, 557, 695, 841, 1054, 1239, 1240
PspPPI	RGGWCCY	2 cut(s)	555, 1238
PspXI	VCTCGAGB	3 cut(s)	8, 14, 1178
PstI	CTGCAG	1 cut(s)	38
PstNI	CAGNNNCTG	2 cut(s)	754, 1493
PsuI	RGATCY	1 cut(s)	397
PsyI	GACNNNGTC	1 cut(s)	265
RruI	TCGCGA	1 cut(s)	811
RsaI	GTAC	2 cut(s)	89, 454
RsaNI	GTAC	2 cut(s)	88, 453
SacI	GAGCTC	3 cut(s)	9, 15, 21
SalI	GTCGAC	2 cut(s)	107, 274
SaqAI	TTAA	3 cut(s)	963, 1329, 1389
SatI	GCNGC	8 cut(s)	34, 37, 306, 360, 363, 474, 597, 823
Sau3AI	GATC	3 cut(s)	397, 795, 1019
SchI	GAGTC	5 cut(s)	125, 182, 203, 1136, 1166
ScrFI	CCNGG	5 cut(s)	517, 755, 763, 1025, 1205
SduI	GDGCHC	6 cut(s)	9, 15, 21, 645, 1210, 1279
SfaNI	GCATC	4 cut(s)	279, 317, 355, 735
SfcI	CTRYAG	1 cut(s)	34
SfiI	GGCCNNNNNGGCC	1 cut(s)	659
SfoI	GGCGCC	2 cut(s)	382, 514
Sfr274I	CTCGAG	4 cut(s)	8, 14, 1178, 1209
SfuI	TTCGAA	1 cut(s)	326
SgrAI	CRCCGGYG	1 cut(s)	143
SinI	GGWCC	4 cut(s)	555, 694, 840, 1238
SlaI	CTCGAG	4 cut(s)	8, 14, 1178, 1209
SmlI	CTYRAG	5 cut(s)	8, 14, 425, 1178, 1209
SmoI	CTYRAG	5 cut(s)	8, 14, 425, 1178, 1209
SphI	GCATGC	1 cut(s)	994
Sse9I	AATT	1 cut(s)	1214
SseBI	AGGCCT	2 cut(s)	974, 1105
SspDI	GGCGCC	2 cut(s)	380, 512
SspMI	CTAG	1 cut(s)	506
SstI	GAGCTC	3 cut(s)	9, 15, 21
StuI	AGGCCT	2 cut(s)	974, 1105
StyD4I	CCNGG	5 cut(s)	515, 753, 761, 1023, 1203
StyI	CCWWGG	1 cut(s)	975
TaaI	ACNGT	8 cut(s)	229, 452, 676, 844, 945, 1118, 1149, 1452
TaiI	ACGT	4 cut(s)	266, 285, 591, 884
TasI	AATT	1 cut(s)	1214
TauI	GCSGC	5 cut(s)	308, 362, 365, 476, 599
TfiI	GAWTC	5 cut(s)	323, 726, 923, 1028, 1490
Tru1I	TTAA	3 cut(s)	963, 1329, 1389
Tru9I	TTAA	3 cut(s)	963, 1329, 1389
TscAI	CASTG	4 cut(s)	46, 89, 805, 1152
TseFI	GTSAC	1 cut(s)	283
TseI	GCWGC	3 cut(s)	33, 36, 822
Tsp45I	GTSAC	1 cut(s)	283
TspDTI	ATGAA	2 cut(s)	896, 1126
TspGWI	ACGGA	3 cut(s)	293, 599, 1296
TspRI	CASTG	4 cut(s)	46, 89, 805, 1152
Tth111I	GACNNNGTC	1 cut(s)	265
Van91I	CCANNNNNTGG	1 cut(s)	703
VpaK11BI	GGWCC	4 cut(s)	555, 694, 840, 1238
XceI	RCATGY	2 cut(s)	622, 994
XcmI	CCANNNNNNNNNTGG	1 cut(s)	143
XhoI	CTCGAG	4 cut(s)	8, 14, 1178, 1209
XmiI	GTMKAC	3 cut(s)	108, 275, 1167
XspI	CTAG	1 cut(s)	506
ZraI	GACGTC	2 cut(s)	264, 589

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.